ATMG00520

Intron maturase, type II family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
Mt
OG0020167
Physical Location & Seq
Reverse (-)
144294 .. 146312
2019 bp
Loading structure...
UTR
Exon/CDS
Intron
ATMG00520.1

Sequence Viewer

Length: 2019 bp
GGGTTGAAGTTTAGACCGCTCACAGTAGTTCTACCTATAGAAAAGATCATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAGACACATCGCATTTCCGCTCGGGTCAAGGCTGCCACTCGGTCCTAAGACGGATCAAAGAAGAGTGGGGAATCTCTCGCTGGTTTTTAGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCCAAATTTTGAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCAGAAAGTATTTTCCGCCGGACGACTCGTAGGAGTTGAGAGGGGCCCTTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGATTGTTCAGAGAGTCAGATCGGTTCTATTAAGGACAGGTCGTCGTATTGATGACCAAGAAAACCCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACAACAGAGCCATCATTGTGGGGAGCGTTAAGAGCATGCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCCCACAAGCACCCTCCGGCTCAGGGGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGCCGTCTTCCTTAACAAGCCCTCGAGCCTTCTTTGCGCCGCCTTCCTCATAGAAGCCGCCGGGTTGACCCCGAAGGCTGAATTCTATGGTGGAGAACGCTGTAATAATAATTGGGCCATGAGAGACCTTCTTAAGTATTGCAAAAGAAAGGGCCTGCTGATAGAGCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGAGGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCATTTCCTACAATCTGGCCTGAACCTTTGGGTAGGCTCCGCAGGATCAACAACAATAGCTGCACGGAGTACGGTAGAATTCCTTGGTACGGTCATTCGGGAAGTCCCTCCGAGGACGACTCCCATACAATTTTTGCGAGAGCTGGAAAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCACCTACGCTCCGCCATCCATTCAAAGTTTAGGAACCTAGGTGATAGTATCCCGATCAAACAGCTGACGAAGGGGATGAGCAAAACAGGGAGTCTACAGGACGGGGTTCAACTAGCGGAGACTCTTGGAACAGCTGGAGTCAGAAGTCCCCAAGTTAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTCTTGCATAGCTCAGGTCGGAGCAACGCGTCATCGGACGTTCAACAGGTAGTCTCACGATCGGGCACTCATGCCCGTAAGTTGTCATTGTATACTCCCCCGGGTCGGAAGGCGGCGGGGGAGGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATAAAGATAGAGGCACCTATAAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGTTTGACGAACGTCAGCGACGAAGACATCGTAAATTGGTCCGCGGGCATCGCGATAAGTCCTCTGTCCTACTACAGGTGCCGCGACAACCTTTATCAAGTCCGAACGATTGTCGACCACCAGATTCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCCGAATATAATCCTCAAGTACTCCAAAGACTCAAATATTGTAAATCAAGAAGGTGGCAAGATCCTTGCAGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGACCTGAACAAGAAGGAACACTCAACTACTAGTCTAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Intron_maturas2

Protein Analysis

672

Amino Acids

75.45

Weight (kDa)

10.06

Isoelectric Point (pI)

54.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 3 - 86 2.4e-06 Reverse transcriptase (RNA-dependent DNA polymerase)
Intron_maturas2 PF01348 534 - 629 4.6e-11 Type II intron maturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes (Group: OG0020167)

Species Orthologous Gene IDs
arabidopsis_thaliana ATMG00520
pyrus_communis pycom461g00220
rosa_laevigata RLG00000000014 RLG00000000083 RLG00000000121 RLG00000000368

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 992, 1609, 1767, 1861
AccBSI CCGCTC 2 cut(s) 19, 120
AccI GTMKAC 4 cut(s) 1186, 1315, 1523, 1803
AccII CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
AcoI YGGCCR 1 cut(s) 1673
AcsI RAATTY 6 cut(s) 191, 243, 435, 773, 1109, 1589
AcvI CACGTG 1 cut(s) 1684
AcyI GRCGYC 1 cut(s) 1862
AdeI CACNNNGTG 1 cut(s) 353
AfaI GTAC 6 cut(s) 72, 357, 431, 1102, 1120, 1883
AfiI CCNNNNNNNGG 6 cut(s) 646, 685, 913, 1120, 1536, 1764
AflII CTTAAG 1 cut(s) 824
AflIII ACRYGT 1 cut(s) 1458
AgsI TTSAA 6 cut(s) 7, 250, 526, 1245, 1331, 1475
AhdI GACNNNNNGTC 1 cut(s) 480
AhlI ACTAGT 2 cut(s) 877, 2006
AjnI CCWGG 4 cut(s) 373, 505, 900, 1670
Alw26I GTCTC 3 cut(s) 810, 1334, 1489
Ama87I CYCGRG 4 cut(s) 92, 121, 715, 1531
ApaI GGGCCC 1 cut(s) 335
ApeKI GCWGC 3 cut(s) 132, 1091, 1584
ApoI RAATTY 6 cut(s) 191, 243, 435, 773, 1109, 1589
AspA2I CCTAGG 1 cut(s) 1258
AspLEI GCGC 3 cut(s) 731, 958, 1864
AsuC2I CCSGG 4 cut(s) 754, 1532, 1533, 1971
AsuHPI GGTGA 2 cut(s) 1274, 1825
AvaI CYCGRG 4 cut(s) 92, 121, 715, 1531
AvaII GGWCC 5 cut(s) 142, 652, 1392, 1728, 1967
AvrII CCTAGG 1 cut(s) 1258
BaeGI GKGCMC 2 cut(s) 335, 1499
BalI TGGCCA 1 cut(s) 1675
BamHI GGATCC 1 cut(s) 417
BanI GGYRCC 4 cut(s) 992, 1609, 1767, 1861
BanII GRGCYC 1 cut(s) 335
BbrPI CACGTG 1 cut(s) 1684
BbsI GAAGAC 3 cut(s) 691, 1672, 1719
BbvI GCAGC 3 cut(s) 119, 1078, 1596
BccI CCATC 3 cut(s) 227, 557, 1244
BceAI ACGGC 2 cut(s) 680, 980
BciT130I CCWGG 4 cut(s) 375, 507, 902, 1672
BciVI GTATCC 2 cut(s) 1214, 1280
BcnI CCSGG 4 cut(s) 754, 1532, 1533, 1971
BcoDI GTCTC 3 cut(s) 810, 1334, 1489
BcuI ACTAGT 2 cut(s) 877, 2006
BfaI CTAG 7 cut(s) 878, 1259, 1334, 1838, 2007, 2012, 2017
BfmI CTRYAG 3 cut(s) 36, 1316, 1762
BfoI RGCGCY 1 cut(s) 1865
BfrI CTTAAG 1 cut(s) 824
BfuI GTATCC 2 cut(s) 1214, 1280
BisI GCNGC 8 cut(s) 133, 588, 732, 750, 1092, 1545, 1585, 1771
BlnI CCTAGG 1 cut(s) 1258
BlsI GCNGC 8 cut(s) 134, 589, 733, 751, 1093, 1546, 1586, 1772
BmcAI AGTACT 1 cut(s) 1883
Bme1390I CCNGG 8 cut(s) 375, 507, 754, 902, 1532, 1533, 1672, 1971
Bme18I GGWCC 5 cut(s) 142, 652, 1392, 1728, 1967
BmeRI GACNNNNNGTC 1 cut(s) 480
BmeT110I CYCGRG 4 cut(s) 92, 121, 715, 1531
BmrFI CCNGG 8 cut(s) 375, 507, 754, 902, 1532, 1533, 1672, 1971
BmrI ACTGGG 2 cut(s) 989, 1576
BmsI GCATC 1 cut(s) 1746
BmuI ACTGGG 2 cut(s) 989, 1576
BoxI GACNNNNGTC 1 cut(s) 1700
BpiI GAAGAC 3 cut(s) 691, 1672, 1719
BplI GAGNNNNNCTC 2 cut(s) 1135, 1167
BpmI CTGGAG 2 cut(s) 528, 1377
Bpu10I CCTNAGC 2 cut(s) 644, 1444
BpuEI CTTGAG 1 cut(s) 1862
BpuMI CCSGG 4 cut(s) 754, 1532, 1533, 1971
BsaAI YACGTR 1 cut(s) 1684
BsaHI GRCGYC 1 cut(s) 1862
BsaI GGTCTC 1 cut(s) 810
BsaJI CCNNGG 9 cut(s) 505, 1114, 1142, 1258, 1530, 1531, 1670, 1731, 1857
BsaXI ACNNNNNCTCC 2 cut(s) 1214, 1244
Bsc4I CCNNNNNNNGG 6 cut(s) 646, 685, 913, 1120, 1536, 1764
Bse1I ACTGG 2 cut(s) 984, 1571
BseBI CCWGG 4 cut(s) 375, 507, 902, 1672
BseDI CCNNGG 9 cut(s) 505, 1114, 1142, 1258, 1530, 1531, 1670, 1731, 1857
BseGI GGATG 4 cut(s) 237, 1236, 1302, 1404
BseLI CCNNNNNNNGG 6 cut(s) 646, 685, 913, 1120, 1536, 1764
BseMII CTCAG 2 cut(s) 658, 1458
BseNI ACTGG 2 cut(s) 984, 1571
BseRI GAGGAG 1 cut(s) 1572
BseSI GKGCMC 2 cut(s) 335, 1499
BseXI GCAGC 3 cut(s) 119, 1078, 1596
BseYI CCCAGC 1 cut(s) 859
BsgI GTGCAG 1 cut(s) 1077
Bsh1236I CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
Bsh1285I CGRYCG 2 cut(s) 226, 1493
BshNI GGYRCC 4 cut(s) 992, 1609, 1767, 1861
BsiEI CGRYCG 2 cut(s) 226, 1493
BsiHKCI CYCGRG 4 cut(s) 92, 121, 715, 1531
BsiSI CCGG 6 cut(s) 306, 640, 753, 1408, 1532, 1971
BslFI GGGAC 5 cut(s) 329, 665, 1121, 1353, 1405
BslI CCNNNNNNNGG 6 cut(s) 646, 685, 913, 1120, 1536, 1764
BsmAI GTCTC 3 cut(s) 810, 1334, 1489
BsmFI GGGAC 5 cut(s) 329, 665, 1121, 1353, 1405
Bso31I GGTCTC 1 cut(s) 810
BsoBI CYCGRG 4 cut(s) 92, 121, 715, 1531
Bsp120I GGGCCC 1 cut(s) 331
Bsp1286I GDGCHC 2 cut(s) 335, 1499
Bsp68I TCGCGA 1 cut(s) 1742
BspCNI CTCAG 2 cut(s) 657, 1457
BspFNI CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
BspHI TCATGA 1 cut(s) 48
BspT107I GGYRCC 4 cut(s) 992, 1609, 1767, 1861
BspTI CTTAAG 1 cut(s) 824
BspTNI GGTCTC 1 cut(s) 810
BsrBI CCGCTC 2 cut(s) 19, 120
BsrI ACTGG 2 cut(s) 984, 1571
BssECI CCNNGG 9 cut(s) 505, 1114, 1142, 1258, 1530, 1531, 1670, 1731, 1857
BssNAI GTATAC 1 cut(s) 1524
BssNI GRCGYC 1 cut(s) 1862
BssT1I CCWWGG 2 cut(s) 1114, 1258
Bst1107I GTATAC 1 cut(s) 1524
Bst2UI CCWGG 4 cut(s) 375, 507, 902, 1672
Bst4CI ACNGT 6 cut(s) 25, 353, 1105, 1123, 1202, 1396
Bst6I CTCTTC 2 cut(s) 156, 249
BstACI GRCGYC 1 cut(s) 1862
BstAFI CTTAAG 1 cut(s) 824
BstBAI YACGTR 1 cut(s) 1684
BstC8I GCNNGC 6 cut(s) 520, 575, 848, 915, 1219, 1735
BstDEI CTNAG 3 cut(s) 146, 644, 1444
BstDSI CCRYGG 1 cut(s) 1731
BstENI CCTNNNNNAGG 1 cut(s) 1762
BstF5I GGATG 4 cut(s) 237, 1236, 1302, 1404
BstFNI CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
BstH2I RGCGCY 1 cut(s) 1865
BstHHI GCGC 3 cut(s) 731, 958, 1864
BstMAI GTCTC 3 cut(s) 810, 1334, 1489
BstMCI CGRYCG 2 cut(s) 226, 1493
BstNI CCWGG 4 cut(s) 375, 507, 902, 1672
BstNSI RCATGY 1 cut(s) 577
BstPAI GACNNNNGTC 1 cut(s) 1700
BstSCI CCNGG 8 cut(s) 373, 505, 752, 900, 1530, 1531, 1670, 1969
BstSFI CTRYAG 3 cut(s) 36, 1316, 1762
BstSLI GKGCMC 2 cut(s) 335, 1499
BstUI CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
BstV1I GCAGC 3 cut(s) 119, 1078, 1596
BstV2I GAAGAC 3 cut(s) 691, 1672, 1719
BstX2I RGATCY 4 cut(s) 417, 1425, 1574, 1923
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 4 cut(s) 417, 1425, 1574, 1923
BstZ17I GTATAC 1 cut(s) 1524
BsuI GTATCC 2 cut(s) 1214, 1280
BtgI CCRYGG 1 cut(s) 1731
BtgZI GCGATG 2 cut(s) 93, 1723
BtsCI GGATG 4 cut(s) 237, 1236, 1302, 1404
BtsIMutI CAGTG 2 cut(s) 358, 1564
BtuMI TCGCGA 1 cut(s) 1742
Cac8I GCNNGC 6 cut(s) 520, 575, 848, 915, 1219, 1735
CciI TCATGA 1 cut(s) 48
CfoI GCGC 3 cut(s) 731, 958, 1864
Cfr42I CCGCGG 1 cut(s) 1734
Cfr9I CCCGGG 1 cut(s) 1531
CseI GACGC 2 cut(s) 1172, 1449
Csp6I GTAC 6 cut(s) 71, 356, 430, 1101, 1119, 1882
CspCI CAANNNNNGTGG 2 cut(s) 1665, 1700
CviAII CATG 4 cut(s) 49, 574, 811, 1502
CviQI GTAC 6 cut(s) 71, 356, 430, 1101, 1119, 1882
DdeI CTNAG 3 cut(s) 146, 644, 1444
DinI GGCGCC 1 cut(s) 1863
DraIII CACNNNGTG 1 cut(s) 353
DriI GACNNNNNGTC 1 cut(s) 480
EaeI YGGCCR 1 cut(s) 1673
Eam1104I CTCTTC 2 cut(s) 156, 249
Eam1105I GACNNNNNGTC 1 cut(s) 480
EarI CTCTTC 2 cut(s) 156, 249
EciI GGCGGA 2 cut(s) 292, 1222
Eco130I CCWWGG 2 cut(s) 1114, 1258
Eco147I AGGCCT 2 cut(s) 664, 900
Eco24I GRGCYC 1 cut(s) 335
Eco31I GGTCTC 1 cut(s) 810
Eco47I GGWCC 5 cut(s) 142, 652, 1392, 1728, 1967
Eco72I CACGTG 1 cut(s) 1684
Eco88I CYCGRG 4 cut(s) 92, 121, 715, 1531
EcoNI CCTNNNNNAGG 1 cut(s) 1762
EcoO109I RGGNCCY 4 cut(s) 331, 332, 844, 916
EcoRI GAATTC 4 cut(s) 191, 773, 1109, 1589
EcoRII CCWGG 4 cut(s) 373, 505, 900, 1670
EcoT14I CCWWGG 2 cut(s) 1114, 1258
EcoT38I GRGCYC 1 cut(s) 335
EgeI GGCGCC 1 cut(s) 1863
EheI GGCGCC 1 cut(s) 1863
ErhI CCWWGG 2 cut(s) 1114, 1258
FaeI CATG 4 cut(s) 52, 577, 814, 1505
FaqI GGGAC 5 cut(s) 329, 665, 1121, 1353, 1405
FatI CATG 4 cut(s) 48, 573, 810, 1501
FauI CCCGC 4 cut(s) 857, 1540, 1564, 1726
FblI GTMKAC 4 cut(s) 1186, 1315, 1523, 1803
Fnu4HI GCNGC 8 cut(s) 133, 588, 732, 750, 1092, 1545, 1585, 1771
FokI GGATG 4 cut(s) 224, 1223, 1309, 1391
FriOI GRGCYC 1 cut(s) 335
Fsp4HI GCNGC 8 cut(s) 133, 588, 732, 750, 1092, 1545, 1585, 1771
FspBI CTAG 7 cut(s) 878, 1259, 1334, 1838, 2007, 2012, 2017
GlaI GCGC 3 cut(s) 730, 957, 1863
GluI GCNGC 8 cut(s) 133, 588, 732, 750, 1092, 1545, 1585, 1771
GsaI CCCAGC 1 cut(s) 863
GsuI CTGGAG 2 cut(s) 528, 1377
HaeII RGCGCY 1 cut(s) 1865
HapII CCGG 6 cut(s) 306, 640, 753, 1408, 1532, 1971
HgaI GACGC 2 cut(s) 1172, 1449
HhaI GCGC 3 cut(s) 731, 958, 1864
Hin1I GRCGYC 1 cut(s) 1862
Hin1II CATG 4 cut(s) 52, 577, 814, 1505
Hin6I GCGC 3 cut(s) 729, 956, 1862
HinP1I GCGC 3 cut(s) 729, 956, 1862
HincII GTYRAC 2 cut(s) 759, 1804
HindII GTYRAC 2 cut(s) 759, 1804
HindIII AAGCTT 1 cut(s) 520
HpaII CCGG 6 cut(s) 306, 640, 753, 1408, 1532, 1971
HphI GGTGA 2 cut(s) 1274, 1825
Hpy166II GTNNAC 6 cut(s) 356, 759, 1187, 1316, 1524, 1804
Hpy8I GTNNAC 6 cut(s) 356, 759, 1187, 1316, 1524, 1804
Hpy99I CGWCG 6 cut(s) 266, 486, 613, 688, 971, 1712
HpyCH4III ACNGT 6 cut(s) 25, 353, 1105, 1123, 1202, 1396
HpyCH4IV ACGT 4 cut(s) 1024, 1470, 1683, 1701
HpyCH4V TGCA 6 cut(s) 577, 834, 1094, 1438, 1826, 1931
HpyF3I CTNAG 3 cut(s) 146, 644, 1444
HpySE526I ACGT 4 cut(s) 1024, 1470, 1683, 1701
Hsp92I GRCGYC 1 cut(s) 1862
Hsp92II CATG 4 cut(s) 52, 577, 814, 1505
HspAI GCGC 3 cut(s) 729, 956, 1862
KasI GGCGCC 1 cut(s) 1861
KspI CCGCGG 1 cut(s) 1734
LmnI GCTCC 5 cut(s) 535, 561, 1073, 1235, 1452
Lsp1109I GCAGC 3 cut(s) 119, 1078, 1596
LweI GCATC 1 cut(s) 1746
MaeI CTAG 7 cut(s) 878, 1259, 1334, 1838, 2007, 2012, 2017
MaeII ACGT 4 cut(s) 1024, 1470, 1683, 1701
MaeIII GTNAC 1 cut(s) 950
MbiI CCGCTC 2 cut(s) 19, 120
MboII GAAGA 7 cut(s) 173, 266, 524, 691, 1674, 1677, 1724
MflI RGATCY 4 cut(s) 417, 1425, 1574, 1923
MhlI GDGCHC 2 cut(s) 335, 1499
MlsI TGGCCA 1 cut(s) 1675
MluCI AATT 9 cut(s) 191, 243, 435, 773, 802, 1109, 1160, 1589, 1723
MluI ACGCGT 1 cut(s) 1458
MluNI TGGCCA 1 cut(s) 1675
Mly113I GGCGCC 1 cut(s) 1862
MlyI GAGTC 8 cut(s) 228, 306, 462, 1144, 1321, 1336, 1368, 1886
MmeI TCCRAC 3 cut(s) 445, 1430, 1517
Mox20I TGGCCA 1 cut(s) 1675
MscI TGGCCA 1 cut(s) 1675
MseI TTAA 6 cut(s) 470, 567, 705, 825, 923, 938
MslI CAYNNNNRTG 1 cut(s) 554
Msp20I TGGCCA 1 cut(s) 1675
MspA1I CMGCKG 3 cut(s) 1285, 1355, 1733
MspCI CTTAAG 1 cut(s) 824
MspI CCGG 6 cut(s) 306, 640, 753, 1408, 1532, 1971
MspR9I CCNGG 8 cut(s) 375, 507, 754, 902, 1532, 1533, 1672, 1971
MvaI CCWGG 4 cut(s) 375, 507, 902, 1672
MvnI CGCG 6 cut(s) 956, 958, 1460, 1733, 1742, 1773
NarI GGCGCC 1 cut(s) 1862
NciI CCSGG 4 cut(s) 754, 1532, 1533, 1971
NlaIII CATG 4 cut(s) 52, 577, 814, 1505
NmeAIII GCCGAG 1 cut(s) 1838
NruI TCGCGA 1 cut(s) 1742
NspI RCATGY 1 cut(s) 577
PaeI GCATGC 1 cut(s) 577
PaeR7I CTCGAG 1 cut(s) 715
PagI TCATGA 1 cut(s) 48
PceI AGGCCT 2 cut(s) 664, 900
PcsI WCGNNNNNNNCGW 3 cut(s) 993, 1707, 1716
PfeI GAWTC 4 cut(s) 77, 171, 984, 1813
PflFI GACNNNGTC 1 cut(s) 1971
PkrI GCNGC 8 cut(s) 134, 589, 733, 751, 1093, 1546, 1586, 1772
Ple19I CGATCG 1 cut(s) 1493
PleI GAGTC 8 cut(s) 228, 306, 461, 1144, 1320, 1336, 1367, 1886
PluTI GGCGCC 1 cut(s) 1865
PmaCI CACGTG 1 cut(s) 1684
PmlI CACGTG 1 cut(s) 1684
PpsI GAGTC 8 cut(s) 228, 306, 461, 1144, 1320, 1336, 1367, 1886
Ppu21I YACGTR 1 cut(s) 1684
PshAI GACNNNNGTC 1 cut(s) 1700
Psp6I CCWGG 4 cut(s) 373, 505, 900, 1670
PspCI CACGTG 1 cut(s) 1684
PspFI CCCAGC 1 cut(s) 859
PspGI CCWGG 4 cut(s) 373, 505, 900, 1670
PspOMI GGGCCC 1 cut(s) 331
PspXI VCTCGAGB 1 cut(s) 715
PsuI RGATCY 4 cut(s) 417, 1425, 1574, 1923
PsyI GACNNNGTC 1 cut(s) 1971
PvuI CGATCG 1 cut(s) 1493
PvuII CAGCTG 2 cut(s) 1285, 1355
RruI TCGCGA 1 cut(s) 1742
RsaI GTAC 6 cut(s) 72, 357, 431, 1102, 1120, 1883
RsaNI GTAC 6 cut(s) 71, 356, 430, 1101, 1119, 1882
RseI CAYNNNNRTG 1 cut(s) 554
SacII CCGCGG 1 cut(s) 1734
SalI GTCGAC 1 cut(s) 1802
SaqAI TTAA 6 cut(s) 470, 567, 705, 825, 923, 938
SatI GCNGC 8 cut(s) 133, 588, 732, 750, 1092, 1545, 1585, 1771
ScaI AGTACT 1 cut(s) 1883
SchI GAGTC 8 cut(s) 228, 306, 462, 1144, 1321, 1336, 1368, 1886
ScrFI CCNGG 8 cut(s) 375, 507, 754, 902, 1532, 1533, 1672, 1971
SduI GDGCHC 2 cut(s) 335, 1499
SfaNI GCATC 1 cut(s) 1746
SfcI CTRYAG 3 cut(s) 36, 1316, 1762
SfoI GGCGCC 1 cut(s) 1863
Sfr274I CTCGAG 1 cut(s) 715
Sfr303I CCGCGG 1 cut(s) 1734
SgrBI CCGCGG 1 cut(s) 1734
SinI GGWCC 5 cut(s) 142, 652, 1392, 1728, 1967
SlaI CTCGAG 1 cut(s) 715
SmaI CCCGGG 1 cut(s) 1533
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 3 cut(s) 715, 824, 1877
SmoI CTYRAG 3 cut(s) 715, 824, 1877
SpeI ACTAGT 2 cut(s) 877, 2006
SphI GCATGC 1 cut(s) 577
Sse9I AATT 9 cut(s) 191, 243, 435, 773, 802, 1109, 1160, 1589, 1723
SseBI AGGCCT 2 cut(s) 664, 900
SspDI GGCGCC 1 cut(s) 1861
SspI AATATT 2 cut(s) 1830, 1900
SspMI CTAG 7 cut(s) 878, 1259, 1334, 1838, 2007, 2012, 2017
StuI AGGCCT 2 cut(s) 664, 900
StyD4I CCNGG 8 cut(s) 373, 505, 752, 900, 1530, 1531, 1670, 1969
StyI CCWWGG 2 cut(s) 1114, 1258
TaaI ACNGT 6 cut(s) 25, 353, 1105, 1123, 1202, 1396
TaiI ACGT 4 cut(s) 1027, 1473, 1686, 1704
TaqI TCGA 9 cut(s) 75, 195, 222, 232, 261, 399, 716, 1645, 1803
TaqII GACCGA 2 cut(s) 130, 240
TasI AATT 9 cut(s) 191, 243, 435, 773, 802, 1109, 1160, 1589, 1723
TatI WGTACW 2 cut(s) 355, 1881
TauI GCSGC 5 cut(s) 590, 734, 752, 1547, 1773
TfiI GAWTC 4 cut(s) 77, 171, 984, 1813
Tru1I TTAA 6 cut(s) 470, 567, 705, 825, 923, 938
Tru9I TTAA 6 cut(s) 470, 567, 705, 825, 923, 938
TscAI CASTG 2 cut(s) 358, 1571
TseI GCWGC 3 cut(s) 132, 1091, 1584
TspDTI ATGAA 2 cut(s) 65, 584
TspGWI ACGGA 3 cut(s) 166, 331, 1111
TspMI CCCGGG 1 cut(s) 1531
TspRI CASTG 2 cut(s) 358, 1571
Tth111I GACNNNGTC 1 cut(s) 1971
Vha464I CTTAAG 1 cut(s) 824
VpaK11BI GGWCC 5 cut(s) 142, 652, 1392, 1728, 1967
XagI CCTNNNNNAGG 1 cut(s) 1762
XapI RAATTY 6 cut(s) 191, 243, 435, 773, 1109, 1589
XceI RCATGY 1 cut(s) 577
XcmI CCANNNNNNNNNTGG 1 cut(s) 503
XhoI CTCGAG 1 cut(s) 715
XmaI CCCGGG 1 cut(s) 1531
XmaJI CCTAGG 1 cut(s) 1258
XmiI GTMKAC 4 cut(s) 1186, 1315, 1523, 1803
XspI CTAG 7 cut(s) 878, 1259, 1334, 1838, 2007, 2012, 2017
ZrmI AGTACT 1 cut(s) 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.