DNA RNA polymerases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g29101 FvH4_4g15294 |
| rosa_multiflora | Rmu_sc0001374.1_g000055 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 322 |
| AciI | CCGC | 1 cut(s) | 322 |
| AclI | AACGTT | 1 cut(s) | 517 |
| AclWI | GGATC | 1 cut(s) | 184 |
| AcsI | RAATTY | 2 cut(s) | 142, 254 |
| AfaI | GTAC | 1 cut(s) | 278 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 429 |
| AgeI | ACCGGT | 1 cut(s) | 86 |
| AgsI | TTSAA | 5 cut(s) | 112, 254, 259, 266, 469 |
| Alw26I | GTCTC | 1 cut(s) | 95 |
| AlwI | GGATC | 1 cut(s) | 184 |
| ApeKI | GCWGC | 3 cut(s) | 35, 56, 285 |
| ApoI | RAATTY | 2 cut(s) | 142, 254 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 134, 166 |
| AsiGI | ACCGGT | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 229, 464 |
| AsuHPI | GGTGA | 3 cut(s) | 17, 111, 364 |
| AsuII | TTCGAA | 1 cut(s) | 238 |
| BbvI | GCAGC | 3 cut(s) | 22, 43, 297 |
| BccI | CCATC | 3 cut(s) | 46, 275, 354 |
| BcoDI | GTCTC | 1 cut(s) | 95 |
| BisI | GCNGC | 4 cut(s) | 36, 57, 286, 323 |
| BlsI | GCNGC | 4 cut(s) | 37, 58, 287, 324 |
| BpmI | CTGGAG | 1 cut(s) | 530 |
| Bpu14I | TTCGAA | 1 cut(s) | 238 |
| BsaI | GGTCTC | 1 cut(s) | 95 |
| BsaWI | WCCGGW | 2 cut(s) | 86, 121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 437, 467 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 429 |
| Bse118I | RCCGGY | 1 cut(s) | 86 |
| Bse1I | ACTGG | 2 cut(s) | 317, 497 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 429 |
| BseNI | ACTGG | 2 cut(s) | 317, 497 |
| BseRI | GAGGAG | 1 cut(s) | 458 |
| BseXI | GCAGC | 3 cut(s) | 22, 43, 297 |
| BshTI | ACCGGT | 1 cut(s) | 86 |
| BsiSI | CCGG | 2 cut(s) | 87, 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 429 |
| BsmAI | GTCTC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 95 |
| Bsp119I | TTCGAA | 1 cut(s) | 238 |
| Bsp143I | GATC | 2 cut(s) | 176, 369 |
| BspACI | CCGC | 1 cut(s) | 322 |
| BspPI | GGATC | 1 cut(s) | 184 |
| BspT104I | TTCGAA | 1 cut(s) | 238 |
| BspTNI | GGTCTC | 1 cut(s) | 95 |
| BsrBI | CCGCTC | 1 cut(s) | 322 |
| BsrFI | RCCGGY | 1 cut(s) | 86 |
| BsrI | ACTGG | 2 cut(s) | 317, 497 |
| BssAI | RCCGGY | 1 cut(s) | 86 |
| BssMI | GATC | 2 cut(s) | 176, 369 |
| Bst4CI | ACNGT | 1 cut(s) | 102 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 538 |
| BstBI | TTCGAA | 1 cut(s) | 238 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstDEI | CTNAG | 1 cut(s) | 479 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 427 |
| BstKTI | GATC | 2 cut(s) | 179, 372 |
| BstMAI | GTCTC | 1 cut(s) | 95 |
| BstMBI | GATC | 2 cut(s) | 176, 369 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 529, 538 |
| BstV1I | GCAGC | 3 cut(s) | 22, 43, 297 |
| BtgZI | GCGATG | 1 cut(s) | 342 |
| BtsI | GCAGTG | 2 cut(s) | 66, 195 |
| BtsIMutI | CAGTG | 3 cut(s) | 66, 195, 567 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| Cfr10I | RCCGGY | 1 cut(s) | 86 |
| CseI | GACGC | 3 cut(s) | 48, 277, 530 |
| Csp6I | GTAC | 1 cut(s) | 277 |
| CspAI | ACCGGT | 1 cut(s) | 86 |
| CviJI | RGCY | 3 cut(s) | 56, 130, 325 |
| CviKI_1 | RGCY | 3 cut(s) | 56, 130, 325 |
| CviQI | GTAC | 1 cut(s) | 277 |
| DdeI | CTNAG | 1 cut(s) | 479 |
| DpnI | GATC | 2 cut(s) | 178, 371 |
| DpnII | GATC | 2 cut(s) | 176, 369 |
| Eco31I | GGTCTC | 1 cut(s) | 95 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 427 |
| EcoRI | GAATTC | 2 cut(s) | 142, 254 |
| FaiI | YATR | 2 cut(s) | 334, 534 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 15, 47, 217, 249, 462, 494 |
| Fnu4HI | GCNGC | 4 cut(s) | 36, 57, 286, 323 |
| Fsp4HI | GCNGC | 4 cut(s) | 36, 57, 286, 323 |
| GluI | GCNGC | 4 cut(s) | 36, 57, 286, 323 |
| GsuI | CTGGAG | 1 cut(s) | 530 |
| HapII | CCGG | 2 cut(s) | 87, 122 |
| HgaI | GACGC | 3 cut(s) | 48, 277, 530 |
| HincII | GTYRAC | 1 cut(s) | 298 |
| HindII | GTYRAC | 1 cut(s) | 298 |
| HinfI | GANTC | 3 cut(s) | 116, 149, 382 |
| HpaII | CCGG | 2 cut(s) | 87, 122 |
| HphI | GGTGA | 3 cut(s) | 17, 111, 364 |
| Hpy166II | GTNNAC | 1 cut(s) | 298 |
| Hpy188I | TCNGA | 6 cut(s) | 148, 154, 181, 273, 387, 546 |
| Hpy188III | TCNNGA | 2 cut(s) | 259, 509 |
| Hpy8I | GTNNAC | 1 cut(s) | 298 |
| HpyAV | CCTTC | 5 cut(s) | 106, 127, 215, 219, 423 |
| HpyCH4III | ACNGT | 1 cut(s) | 102 |
| HpyCH4IV | ACGT | 2 cut(s) | 341, 517 |
| HpyCH4V | TGCA | 1 cut(s) | 71 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 529, 538 |
| HpyF3I | CTNAG | 1 cut(s) | 479 |
| HpySE526I | ACGT | 2 cut(s) | 341, 517 |
| Kzo9I | GATC | 2 cut(s) | 176, 369 |
| LpnPI | CCDG | 8 cut(s) | 30, 100, 135, 214, 298, 388, 494, 510 |
| Lsp1109I | GCAGC | 3 cut(s) | 22, 43, 297 |
| MaeII | ACGT | 2 cut(s) | 341, 517 |
| MalI | GATC | 2 cut(s) | 178, 371 |
| MbiI | CCGCTC | 1 cut(s) | 322 |
| MboI | GATC | 2 cut(s) | 176, 369 |
| MboII | GAAGA | 3 cut(s) | 167, 170, 379 |
| MfeI | CAATTG | 1 cut(s) | 72 |
| MluCI | AATT | 5 cut(s) | 72, 80, 142, 254, 473 |
| MlyI | GAGTC | 2 cut(s) | 158, 376 |
| MmeI | TCCRAC | 3 cut(s) | 21, 132, 285 |
| MnlI | CCTC | 4 cut(s) | 220, 436, 439, 505 |
| MroXI | GAANNNNTTC | 2 cut(s) | 229, 464 |
| MseI | TTAA | 2 cut(s) | 245, 407 |
| MspI | CCGG | 2 cut(s) | 87, 122 |
| MunI | CAATTG | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 529, 538 |
| NdeII | GATC | 2 cut(s) | 176, 369 |
| NspV | TTCGAA | 1 cut(s) | 238 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 285 |
| PdmI | GAANNNNTTC | 2 cut(s) | 229, 464 |
| PfeI | GAWTC | 1 cut(s) | 116 |
| PinAI | ACCGGT | 1 cut(s) | 86 |
| PkrI | GCNGC | 4 cut(s) | 37, 58, 287, 324 |
| PleI | GAGTC | 2 cut(s) | 157, 376 |
| PpsI | GAGTC | 2 cut(s) | 157, 376 |
| Psp1406I | AACGTT | 1 cut(s) | 517 |
| RsaI | GTAC | 1 cut(s) | 278 |
| RsaNI | GTAC | 1 cut(s) | 277 |
| SaqAI | TTAA | 2 cut(s) | 245, 407 |
| SatI | GCNGC | 4 cut(s) | 36, 57, 286, 323 |
| Sau3AI | GATC | 2 cut(s) | 176, 369 |
| SchI | GAGTC | 2 cut(s) | 158, 376 |
| SetI | ASST | 5 cut(s) | 212, 344, 377, 450, 520 |
| SfuI | TTCGAA | 1 cut(s) | 238 |
| Sse9I | AATT | 5 cut(s) | 72, 80, 142, 254, 473 |
| SsiI | CCGC | 1 cut(s) | 322 |
| TaaI | ACNGT | 1 cut(s) | 102 |
| TaiI | ACGT | 2 cut(s) | 344, 520 |
| TaqI | TCGA | 1 cut(s) | 238 |
| TasI | AATT | 5 cut(s) | 72, 80, 142, 254, 473 |
| TauI | GCSGC | 1 cut(s) | 325 |
| TfiI | GAWTC | 1 cut(s) | 116 |
| Tru1I | TTAA | 2 cut(s) | 245, 407 |
| Tru9I | TTAA | 2 cut(s) | 245, 407 |
| TscAI | CASTG | 3 cut(s) | 73, 202, 567 |
| TseI | GCWGC | 3 cut(s) | 35, 56, 285 |
| TspDTI | ATGAA | 1 cut(s) | 24 |
| TspRI | CASTG | 3 cut(s) | 73, 202, 567 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 427 |
| XapI | RAATTY | 2 cut(s) | 142, 254 |
| XmnI | GAANNNNTTC | 2 cut(s) | 229, 464 |