FvH4_2g27591

receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
21858723 .. 21859344
622 bp
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UTR
Exon/CDS
Intron
FvH4_2g27591.t1

Sequence Viewer

Length: 255 bp
ATGGGTACATTGGTTTTGGTGTTTTGCTTGTGGCTGACCTTCAACATTCCTCCTCTCATTTCTGGCAGAAGTCTAAATGATGAGCACAAAAGGGAGCTTGTTTCGATGAATCCTGTACAAAGGCCAGACATCAGCTATGTGTATGATGAGTTAAGGGAATGCCTGAAAATGGAGATGGCATCTGAGAAACCTCTGGTGATGGAGGGCAACCAAACCTGGTCAAGTGGCTCAGCGTCATACTACTCCTTTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

85

Amino Acids

9.61

Weight (kDa)

4.94

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0027746)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g27591 FvH4_2g27610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 7, 117
AfiI CCNNNNNNNGG 1 cut(s) 169
AgsI TTSAA 1 cut(s) 43
AjnI CCWGG 1 cut(s) 215
AluBI AGCT 2 cut(s) 97, 135
AluI AGCT 2 cut(s) 97, 135
Alw21I GWGCWC 1 cut(s) 87
AoxI GGCC 1 cut(s) 122
AsuHPI GGTGA 1 cut(s) 208
BaeI ACNNNNGTAYC 1 cut(s) 30
Bbv12I GWGCWC 1 cut(s) 87
BccI CCATC 2 cut(s) 169, 193
BciT130I CCWGG 1 cut(s) 217
BlpI GCTNAGC 1 cut(s) 229
Bme1390I CCNGG 1 cut(s) 217
BmrFI CCNGG 1 cut(s) 217
BmsI GCATC 1 cut(s) 188
Bpu1102I GCTNAGC 1 cut(s) 229
Bsc4I CCNNNNNNNGG 1 cut(s) 169
BseBI CCWGG 1 cut(s) 217
BseLI CCNNNNNNNGG 1 cut(s) 169
BseMII CTCAG 2 cut(s) 174, 243
BseRI GAGGAG 1 cut(s) 42
BshFI GGCC 1 cut(s) 124
BsiHKAI GWGCWC 1 cut(s) 87
BslI CCNNNNNNNGG 1 cut(s) 169
BsmI GAATGC 1 cut(s) 164
BsnI GGCC 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 87
Bsp1407I TGTACA 1 cut(s) 115
Bsp1720I GCTNAGC 1 cut(s) 229
BspANI GGCC 1 cut(s) 124
BspCNI CTCAG 2 cut(s) 175, 242
BsrGI TGTACA 1 cut(s) 115
Bst2UI CCWGG 1 cut(s) 217
BstAUI TGTACA 1 cut(s) 115
BstDEI CTNAG 2 cut(s) 183, 229
BstNI CCWGG 1 cut(s) 217
BstSCI CCNGG 1 cut(s) 215
BsuRI GGCC 1 cut(s) 124
CseI GACGC 1 cut(s) 222
CsiI ACCWGGT 1 cut(s) 215
Csp6I GTAC 2 cut(s) 6, 116
CviJI RGCY 5 cut(s) 34, 97, 124, 135, 228
CviKI_1 RGCY 5 cut(s) 34, 97, 124, 135, 228
CviQI GTAC 2 cut(s) 6, 116
DdeI CTNAG 2 cut(s) 183, 229
EcoRII CCWGG 1 cut(s) 215
FaiI YATR 3 cut(s) 138, 144, 238
HaeIII GGCC 1 cut(s) 124
HgaI GACGC 1 cut(s) 222
HinfI GANTC 1 cut(s) 109
HphI GGTGA 1 cut(s) 208
Hpy188I TCNGA 1 cut(s) 184
HpyAV CCTTC 1 cut(s) 49
HpyF3I CTNAG 2 cut(s) 183, 229
LmnI GCTCC 1 cut(s) 94
LpnPI CCDG 7 cut(s) 48, 126, 138, 176, 179, 202, 229
LweI GCATC 1 cut(s) 188
MabI ACCWGGT 1 cut(s) 215
MhlI GDGCHC 1 cut(s) 87
MnlI CCTC 4 cut(s) 60, 63, 196, 201
MseI TTAA 1 cut(s) 152
MspR9I CCNGG 1 cut(s) 217
Mva1269I GAATGC 1 cut(s) 164
MvaI CCWGG 1 cut(s) 217
PctI GAATGC 1 cut(s) 164
PfeI GAWTC 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 215
PspGI CCWGG 1 cut(s) 215
RsaI GTAC 2 cut(s) 7, 117
RsaNI GTAC 2 cut(s) 6, 116
SaqAI TTAA 1 cut(s) 152
ScrFI CCNGG 1 cut(s) 217
SduI GDGCHC 1 cut(s) 87
SetI ASST 5 cut(s) 41, 99, 137, 193, 218
SexAI ACCWGGT 1 cut(s) 215
SfaNI GCATC 1 cut(s) 188
StyD4I CCNGG 1 cut(s) 215
TaqI TCGA 1 cut(s) 104
TatI WGTACW 1 cut(s) 115
TfiI GAWTC 1 cut(s) 109
Tru1I TTAA 1 cut(s) 152
Tru9I TTAA 1 cut(s) 152
TspDTI ATGAA 1 cut(s) 122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.