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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g19830 |
| rosa_laevigata | RLG00000033462 |
| rosa_multiflora | Rmu_sc0002206.1_g000002 Rmu_sc0002681.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00046710 |
| rosa_rugosa | Rorug05G0138700 |
| rosa_samantha | Rh5AG230400 Rh5BG231300 Rh5CG259300 Rh5DG236500 |
| rosa_wichuraiana | Rw5G021050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 168, 305 |
| AcsI | RAATTY | 1 cut(s) | 4 |
| AfaI | GTAC | 3 cut(s) | 51, 149, 184 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 84 |
| AgsI | TTSAA | 2 cut(s) | 82, 312 |
| AhlI | ACTAGT | 1 cut(s) | 347 |
| AluBI | AGCT | 3 cut(s) | 137, 259, 377 |
| AluI | AGCT | 3 cut(s) | 137, 259, 377 |
| Alw21I | GWGCWC | 2 cut(s) | 248, 261 |
| ApeKI | GCWGC | 5 cut(s) | 105, 134, 269, 291, 332 |
| ApoI | RAATTY | 1 cut(s) | 4 |
| AspS9I | GGNCC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 1 cut(s) | 361 |
| AvaII | GGWCC | 1 cut(s) | 25 |
| BanII | GRGCYC | 1 cut(s) | 261 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 216, 248 |
| BauI | CACGAG | 1 cut(s) | 359 |
| Bbv12I | GWGCWC | 2 cut(s) | 248, 261 |
| BbvI | GCAGC | 5 cut(s) | 117, 146, 281, 303, 344 |
| BcuI | ACTAGT | 1 cut(s) | 347 |
| BfaI | CTAG | 1 cut(s) | 348 |
| BfmI | CTRYAG | 1 cut(s) | 327 |
| BisI | GCNGC | 6 cut(s) | 106, 135, 270, 292, 305, 333 |
| BlsI | GCNGC | 6 cut(s) | 107, 136, 271, 293, 306, 334 |
| Bme18I | GGWCC | 1 cut(s) | 25 |
| BmgT120I | GGNCC | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 84 |
| Bse1I | ACTGG | 2 cut(s) | 67, 145 |
| Bse3DI | GCAATG | 1 cut(s) | 10 |
| BseGI | GGATG | 1 cut(s) | 74 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 84 |
| BseMI | GCAATG | 1 cut(s) | 10 |
| BseNI | ACTGG | 2 cut(s) | 67, 145 |
| BseXI | GCAGC | 5 cut(s) | 117, 146, 281, 303, 344 |
| BseYI | CCCAGC | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 2 cut(s) | 248, 261 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 84 |
| Bsp1286I | GDGCHC | 2 cut(s) | 248, 261 |
| BspACI | CCGC | 2 cut(s) | 168, 305 |
| BsrDI | GCAATG | 1 cut(s) | 10 |
| BsrI | ACTGG | 2 cut(s) | 67, 145 |
| BssSI | CACGAG | 1 cut(s) | 359 |
| Bst2BI | CACGAG | 1 cut(s) | 359 |
| Bst4CI | ACNGT | 1 cut(s) | 328 |
| BstC8I | GCNNGC | 1 cut(s) | 166 |
| BstF5I | GGATG | 1 cut(s) | 74 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 134, 329 |
| BstSFI | CTRYAG | 1 cut(s) | 327 |
| BstV1I | GCAGC | 5 cut(s) | 117, 146, 281, 303, 344 |
| BtsCI | GGATG | 1 cut(s) | 74 |
| BtsI | GCAGTG | 1 cut(s) | 301 |
| BtsIMutI | CAGTG | 2 cut(s) | 60, 301 |
| Cac8I | GCNNGC | 1 cut(s) | 166 |
| Cfr13I | GGNCC | 1 cut(s) | 25 |
| Csp6I | GTAC | 3 cut(s) | 50, 148, 183 |
| CviAII | CATG | 1 cut(s) | 22 |
| CviJI | RGCY | 5 cut(s) | 91, 137, 259, 272, 377 |
| CviKI_1 | RGCY | 5 cut(s) | 91, 137, 259, 272, 377 |
| CviQI | GTAC | 3 cut(s) | 50, 148, 183 |
| Ecl136II | GAGCTC | 1 cut(s) | 259 |
| Eco24I | GRGCYC | 1 cut(s) | 261 |
| Eco47I | GGWCC | 1 cut(s) | 25 |
| Eco53kI | GAGCTC | 1 cut(s) | 259 |
| EcoICRI | GAGCTC | 1 cut(s) | 259 |
| EcoRI | GAATTC | 1 cut(s) | 4 |
| EcoT38I | GRGCYC | 1 cut(s) | 261 |
| FaeI | CATG | 1 cut(s) | 25 |
| FaiI | YATR | 5 cut(s) | 23, 174, 251, 253, 255 |
| FatI | CATG | 1 cut(s) | 21 |
| Fnu4HI | GCNGC | 6 cut(s) | 106, 135, 270, 292, 305, 333 |
| FokI | GGATG | 1 cut(s) | 61 |
| FriOI | GRGCYC | 1 cut(s) | 261 |
| Fsp4HI | GCNGC | 6 cut(s) | 106, 135, 270, 292, 305, 333 |
| FspBI | CTAG | 1 cut(s) | 348 |
| GluI | GCNGC | 6 cut(s) | 106, 135, 270, 292, 305, 333 |
| GsaI | CCCAGC | 1 cut(s) | 105 |
| Hin1II | CATG | 1 cut(s) | 25 |
| HindIII | AAGCTT | 1 cut(s) | 375 |
| HinfI | GANTC | 2 cut(s) | 227, 357 |
| HphI | GGTGA | 1 cut(s) | 361 |
| Hpy166II | GTNNAC | 3 cut(s) | 72, 142, 369 |
| Hpy188I | TCNGA | 1 cut(s) | 343 |
| Hpy188III | TCNNGA | 2 cut(s) | 210, 361 |
| Hpy8I | GTNNAC | 3 cut(s) | 72, 142, 369 |
| Hpy99I | CGWCG | 1 cut(s) | 59 |
| HpyAV | CCTTC | 3 cut(s) | 88, 207, 318 |
| HpyCH4III | ACNGT | 1 cut(s) | 328 |
| HpyCH4IV | ACGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 2 cut(s) | 179, 269 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 134, 329 |
| HpySE526I | ACGT | 1 cut(s) | 185 |
| Hsp92II | CATG | 1 cut(s) | 25 |
| LpnPI | CCDG | 4 cut(s) | 48, 115, 150, 158 |
| Lsp1109I | GCAGC | 5 cut(s) | 117, 146, 281, 303, 344 |
| MaeI | CTAG | 1 cut(s) | 348 |
| MaeII | ACGT | 1 cut(s) | 185 |
| MaeIII | GTNAC | 2 cut(s) | 186, 296 |
| MboII | GAAGA | 1 cut(s) | 236 |
| MfeI | CAATTG | 1 cut(s) | 82 |
| MhlI | GDGCHC | 2 cut(s) | 248, 261 |
| MluCI | AATT | 3 cut(s) | 4, 82, 313 |
| MlyI | GAGTC | 1 cut(s) | 351 |
| MnlI | CCTC | 3 cut(s) | 29, 54, 246 |
| MseI | TTAA | 1 cut(s) | 195 |
| MspA1I | CMGCKG | 1 cut(s) | 137 |
| MunI | CAATTG | 1 cut(s) | 82 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 134, 329 |
| NlaIII | CATG | 1 cut(s) | 25 |
| NmuCI | GTSAC | 1 cut(s) | 296 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| PkrI | GCNGC | 6 cut(s) | 107, 136, 271, 293, 306, 334 |
| PleI | GAGTC | 1 cut(s) | 351 |
| PpsI | GAGTC | 1 cut(s) | 351 |
| Psp124BI | GAGCTC | 1 cut(s) | 261 |
| PspFI | CCCAGC | 1 cut(s) | 101 |
| PspPI | GGNCC | 1 cut(s) | 25 |
| PvuII | CAGCTG | 1 cut(s) | 137 |
| RsaI | GTAC | 3 cut(s) | 51, 149, 184 |
| RsaNI | GTAC | 3 cut(s) | 50, 148, 183 |
| SacI | GAGCTC | 1 cut(s) | 261 |
| SaqAI | TTAA | 1 cut(s) | 195 |
| SatI | GCNGC | 6 cut(s) | 106, 135, 270, 292, 305, 333 |
| Sau96I | GGNCC | 1 cut(s) | 25 |
| SchI | GAGTC | 1 cut(s) | 351 |
| SduI | GDGCHC | 2 cut(s) | 248, 261 |
| SetI | ASST | 5 cut(s) | 139, 188, 238, 261, 379 |
| SfcI | CTRYAG | 1 cut(s) | 327 |
| SinI | GGWCC | 1 cut(s) | 25 |
| SpeI | ACTAGT | 1 cut(s) | 347 |
| Sse9I | AATT | 3 cut(s) | 4, 82, 313 |
| SsiI | CCGC | 2 cut(s) | 168, 305 |
| SspMI | CTAG | 1 cut(s) | 348 |
| SstI | GAGCTC | 1 cut(s) | 261 |
| TaaI | ACNGT | 1 cut(s) | 328 |
| TaiI | ACGT | 1 cut(s) | 188 |
| TasI | AATT | 3 cut(s) | 4, 82, 313 |
| TatI | WGTACW | 1 cut(s) | 147 |
| TauI | GCSGC | 1 cut(s) | 307 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 1 cut(s) | 195 |
| Tru9I | TTAA | 1 cut(s) | 195 |
| TscAI | CASTG | 2 cut(s) | 67, 301 |
| TseFI | GTSAC | 1 cut(s) | 296 |
| TseI | GCWGC | 5 cut(s) | 105, 134, 269, 291, 332 |
| Tsp45I | GTSAC | 1 cut(s) | 296 |
| TspDTI | ATGAA | 2 cut(s) | 17, 273 |
| TspRI | CASTG | 2 cut(s) | 67, 301 |
| VpaK11BI | GGWCC | 1 cut(s) | 25 |
| XapI | RAATTY | 1 cut(s) | 4 |
| XspI | CTAG | 1 cut(s) | 348 |