FvH4_4g27680

malate transmembrane transporter activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
28558545 .. 28561266
2722 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g27680.t1

Sequence Viewer

Length: 1566 bp
ATGGAGAAGTCGCTTTTGGTTAGCTTCAAAGAGGACGAGTATGAAAGAGAGAGCAGCACATATGTATGCTGTTTCAGTTTCTTGGGCCAAAAGGTAATGAAGTTTAGGGAAGATATACTTGATTTTGCTCTCAAAGCTTGGGAAATGGGTCGTTCTGATCCCAGAAAAGTCATATTTGCTATAAAAATGGGACTGGCATTGTCCATTGTTTCTTCGCTCATATTCTGGAAAGAATCATTCCACAATATCGATATTGGTCAGTACTCAATCTGGGCTATCCTCACCGTCATTGTCATGTTCGAATTCAGCATAGGAGGGACTTTCATTAAAGGATTTAATCGAGGGTTAGGAACCTTGGTTGCTGGAATCCTTGCTTTCTGCTTCGCCGAAGTATCTCTGCTGGCTGGAAATTTGGAGGAAGTTGTAATTGTCATAAGCGTTTTTATAGTTGGATTTTTTGCATCTTACTTGAAGCTGTATCCAACAATGAAACCCTATGAATATGGATTTCGAGTTTTCGTCTTGACATATTGCATTCTTATGGTGGCTGGGAATAGAACAAGGGAGTATAACGGGGCTGTTACGACTCGTTTGGTGCTTATTGCTGTGGGTGCTGCTGTGTGTTTGTTTGTTAACATCTGTATATGCCCAATATGGTCAGGAGAGGATCTGCATAACTTGGTGGTCAAAAATTTCAAGGAAGTTGCTACTTCATTAGAAGGGTGTGTCGATGGCTACCTGAAATTCGTCGAATATGAGAGGACTCCATCGAAAATTCTCACATACCAAGCCTCAGATGATTCAATGTACAAGGGCTATAAATCAGTGATGGAGTCTAAAAGCCAAGAAGAAACTCTGTTGGGGTTTGCAATCTGGGAACCACCTCATGGCCGATATAGAATGTTGAATTATCCTTGGAAAAACTATGTCAAAGTGAGCAGTGCACTGAGGCATTGTGCATTCATGGTCATGGCACTCCATGGATGCCTTCTTTCTGAAATACAGGCCCCAGCCGAAAAGAGACTGGTCTTTTGTACGGAGCTCCGGCGGGTCGGAGCAGAAGGTGCAAAAGTTTTGAGAGAGCTTGGGAAAAAGATAGAGAAGATGGAAAAGTCAGGCCCCGGAGACATACTGAAAGATGTTCATGAGGCAGCAGAGAAGTTACAGAAGAGTATAGACCGTAGATCATACATACTGGTCAATTCAGAGAGTTGGGAAATCGGAAGACGACCTAGAGAACAAGAAGGTGCTGAAAATGTTTCGGATTACAAGGACAGTGATGATATGAAATTGGGACTCAAGTCCTTGAGTGAAACTGTGCTTGACCTGAGGTCTGTTTCTGCTGCATGGACACCTTCTGCAACACAAGGTGCTTCCTCACAATGCGTGTTTAGGAATCAACCAGCTTGGCCATTCGGAGTCGGCAAGGAAGACACAACATATGAAAGTGCAAGCGCCTTGTCCTTGGCTACATTTGTGTCGCTCCTAATCGAATTCGTTGCCAGGCTTCAAAATGTGGTCGATTCATTTGAAGAACTTGGTGAGAAAGCAAAGTTTACGAGTTAG

Protein Analysis

522

Amino Acids

58.61

Weight (kDa)

6.2

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 47 - 514 1.4e-176 Aluminium activated malate transporter
FUSC_2 PF13515 82 - 211 4.8e-12 Fusaric acid resistance protein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012092)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 887
AciI CCGC 1 cut(s) 1048
AclWI GGATC 2 cut(s) 152, 675
AcoI YGGCCR 2 cut(s) 889, 1409
AcsI RAATTY 6 cut(s) 302, 409, 691, 743, 774, 1493
AdeI CACNNNGTG 1 cut(s) 1370
AfaI GTAC 3 cut(s) 263, 809, 1036
AfiI CCNNNNNNNGG 1 cut(s) 887
AgsI TTSAA 7 cut(s) 28, 472, 697, 804, 907, 1511, 1532
AhdI GACNNNNNGTC 1 cut(s) 1330
AjnI CCWGG 1 cut(s) 1502
AjuI GAANNNNNNNTTGG 1 cut(s) 31
AluBI AGCT 6 cut(s) 24, 137, 475, 1042, 1084, 1406
AluI AGCT 6 cut(s) 24, 137, 475, 1042, 1084, 1406
Alw21I GWGCWC 2 cut(s) 946, 1044
Alw26I GTCTC 2 cut(s) 1015, 1119
Alw44I GTGCAC 1 cut(s) 942
AlwI GGATC 2 cut(s) 152, 675
AoxI GGCC 5 cut(s) 85, 889, 1005, 1117, 1409
ApaLI GTGCAC 1 cut(s) 942
ApeKI GCWGC 4 cut(s) 54, 614, 1151, 1343
ApoI RAATTY 6 cut(s) 302, 409, 691, 743, 774, 1493
ArsI GACNNNNNNTTYG 2 cut(s) 1014, 1046
AspLEI GCGC 1 cut(s) 1457
AspS9I GGNCC 3 cut(s) 85, 1006, 1118
AsuC2I CCSGG 1 cut(s) 1122
AsuHPI GGTGA 2 cut(s) 274, 1553
AsuII TTCGAA 1 cut(s) 300
AxyI CCTNAGG 1 cut(s) 1328
BaeGI GKGCMC 1 cut(s) 946
BalI TGGCCA 1 cut(s) 1411
BanII GRGCYC 1 cut(s) 1044
BbsI GAAGAC 2 cut(s) 1231, 1437
Bbv12I GWGCWC 2 cut(s) 946, 1044
BbvI GCAGC 4 cut(s) 66, 601, 1163, 1330
BccI CCATC 4 cut(s) 725, 775, 823, 1099
BcgI CGANNNNNNTGC 2 cut(s) 1481, 1515
BciT130I CCWGG 1 cut(s) 1504
BciVI GTATCC 1 cut(s) 489
BcnI CCSGG 1 cut(s) 1122
BcoDI GTCTC 2 cut(s) 1015, 1119
BfaI CTAG 1 cut(s) 1233
BfoI RGCGCY 1 cut(s) 1458
BfuI GTATCC 1 cut(s) 489
BisI GCNGC 4 cut(s) 55, 615, 1152, 1344
BlsI GCNGC 4 cut(s) 56, 616, 1153, 1345
BmcAI AGTACT 1 cut(s) 263
Bme1390I CCNGG 2 cut(s) 1122, 1504
BmeRI GACNNNNNGTC 1 cut(s) 1330
BmgT120I GGNCC 3 cut(s) 85, 1006, 1118
BmiI GGNNCC 4 cut(s) 352, 879, 1008, 1120
BmrFI CCNGG 2 cut(s) 1122, 1504
BmsI GCATC 2 cut(s) 470, 974
BoxI GACNNNNGTC 1 cut(s) 1300
BpiI GAAGAC 2 cut(s) 1231, 1437
Bpu14I TTCGAA 1 cut(s) 300
BpuEI CTTGAG 2 cut(s) 1283, 1327
BpuMI CCSGG 1 cut(s) 1122
Bsa29I ATCGAT 1 cut(s) 249
BsaJI CCNNGG 5 cut(s) 354, 914, 979, 1120, 1464
Bsc4I CCNNNNNNNGG 1 cut(s) 887
Bse1I ACTGG 3 cut(s) 198, 1029, 1200
Bse21I CCTNAGG 1 cut(s) 1328
BseBI CCWGG 1 cut(s) 1504
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 5 cut(s) 354, 914, 979, 1120, 1464
BseGI GGATG 1 cut(s) 989
BseLI CCNNNNNNNGG 1 cut(s) 887
BseMII CTCAG 3 cut(s) 807, 938, 1319
BseNI ACTGG 3 cut(s) 198, 1029, 1200
BseSI GKGCMC 1 cut(s) 946
BseXI GCAGC 4 cut(s) 66, 601, 1163, 1330
BseYI CCCAGC 2 cut(s) 548, 1009
BshFI GGCC 5 cut(s) 87, 891, 1007, 1119, 1411
BshVI ATCGAT 1 cut(s) 249
BsiHKAI GWGCWC 2 cut(s) 946, 1044
BsiSI CCGG 2 cut(s) 1045, 1122
BslFI GGGAC 3 cut(s) 204, 331, 1308
BslI CCNNNNNNNGG 1 cut(s) 887
BsmAI GTCTC 2 cut(s) 1015, 1119
BsmFI GGGAC 3 cut(s) 204, 331, 1308
BsmI GAATGC 2 cut(s) 534, 959
BsnI GGCC 5 cut(s) 87, 891, 1007, 1119, 1411
Bsp119I TTCGAA 1 cut(s) 300
Bsp1286I GDGCHC 2 cut(s) 946, 1044
Bsp1407I TGTACA 1 cut(s) 807
Bsp143I GATC 3 cut(s) 157, 667, 1184
Bsp19I CCATGG 1 cut(s) 979
BspACI CCGC 1 cut(s) 1048
BspANI GGCC 5 cut(s) 87, 891, 1007, 1119, 1411
BspCNI CTCAG 3 cut(s) 806, 939, 1320
BspDI ATCGAT 1 cut(s) 249
BspHI TCATGA 1 cut(s) 1144
BspLI GGNNCC 4 cut(s) 352, 879, 1008, 1120
BspPI GGATC 2 cut(s) 152, 675
BspT104I TTCGAA 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 807
BsrI ACTGG 3 cut(s) 198, 1029, 1200
BssECI CCNNGG 5 cut(s) 354, 914, 979, 1120, 1464
BssMI GATC 3 cut(s) 157, 667, 1184
BssT1I CCWWGG 4 cut(s) 354, 914, 979, 1464
Bst2UI CCWGG 1 cut(s) 1504
Bst4CI ACNGT 4 cut(s) 286, 1181, 1277, 1318
Bst6I CTCTTC 1 cut(s) 1163
BstAPI GCANNNNNTGC 1 cut(s) 1064
BstAUI TGTACA 1 cut(s) 807
BstBI TTCGAA 1 cut(s) 300
BstC8I GCNNGC 2 cut(s) 402, 1453
BstDEI CTNAG 3 cut(s) 793, 947, 1328
BstDSI CCRYGG 1 cut(s) 979
BstF5I GGATG 1 cut(s) 989
BstH2I RGCGCY 1 cut(s) 1458
BstHHI GCGC 1 cut(s) 1457
BstKTI GATC 3 cut(s) 160, 670, 1187
BstMAI GTCTC 2 cut(s) 1015, 1119
BstMBI GATC 3 cut(s) 157, 667, 1184
BstMWI GCNNNNNNNGC 3 cut(s) 134, 611, 1064
BstNI CCWGG 1 cut(s) 1504
BstPAI GACNNNNGTC 1 cut(s) 1300
BstSCI CCNGG 2 cut(s) 1120, 1502
BstSLI GKGCMC 1 cut(s) 946
BstV1I GCAGC 4 cut(s) 66, 601, 1163, 1330
BstV2I GAAGAC 2 cut(s) 1231, 1437
BstX2I RGATCY 1 cut(s) 667
BstYI RGATCY 1 cut(s) 667
Bsu15I ATCGAT 1 cut(s) 249
Bsu36I CCTNAGG 1 cut(s) 1328
BsuI GTATCC 1 cut(s) 489
BsuRI GGCC 5 cut(s) 87, 891, 1007, 1119, 1411
BsuTUI ATCGAT 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 979
BtsCI GGATG 1 cut(s) 989
BtsI GCAGTG 1 cut(s) 946
BtsIMutI CAGTG 4 cut(s) 831, 944, 946, 1282
Cac8I GCNNGC 2 cut(s) 402, 1453
CciI TCATGA 1 cut(s) 1144
CfoI GCGC 1 cut(s) 1457
Cfr13I GGNCC 3 cut(s) 85, 1006, 1118
ClaI ATCGAT 1 cut(s) 249
Csp6I GTAC 3 cut(s) 262, 808, 1035
CviAII CATG 7 cut(s) 295, 887, 964, 970, 980, 1145, 1347
CviQI GTAC 3 cut(s) 262, 808, 1035
DdeI CTNAG 3 cut(s) 793, 947, 1328
DpnI GATC 3 cut(s) 159, 669, 1186
DpnII GATC 3 cut(s) 157, 667, 1184
DraIII CACNNNGTG 1 cut(s) 1370
DriI GACNNNNNGTC 1 cut(s) 1330
EaeI YGGCCR 2 cut(s) 889, 1409
Eam1104I CTCTTC 1 cut(s) 1163
Eam1105I GACNNNNNGTC 1 cut(s) 1330
EarI CTCTTC 1 cut(s) 1163
Ecl136II GAGCTC 1 cut(s) 1042
Eco130I CCWWGG 4 cut(s) 354, 914, 979, 1464
Eco24I GRGCYC 1 cut(s) 1044
Eco53kI GAGCTC 1 cut(s) 1042
Eco81I CCTNAGG 1 cut(s) 1328
EcoICRI GAGCTC 1 cut(s) 1042
EcoO109I RGGNCCY 2 cut(s) 1006, 1118
EcoRI GAATTC 2 cut(s) 302, 1493
EcoRII CCWGG 1 cut(s) 1502
EcoT14I CCWWGG 4 cut(s) 354, 914, 979, 1464
EcoT38I GRGCYC 1 cut(s) 1044
ErhI CCWWGG 4 cut(s) 354, 914, 979, 1464
FaeI CATG 7 cut(s) 298, 890, 967, 973, 983, 1148, 1350
FalI AAGNNNNNCTT 2 cut(s) 102, 134
FaqI GGGAC 3 cut(s) 204, 331, 1308
FatI CATG 7 cut(s) 294, 886, 963, 969, 979, 1144, 1346
FauI CCCGC 1 cut(s) 1041
FauNDI CATATG 2 cut(s) 61, 1441
Fnu4HI GCNGC 4 cut(s) 55, 615, 1152, 1344
FokI GGATG 1 cut(s) 996
FriOI GRGCYC 1 cut(s) 1044
Fsp4HI GCNGC 4 cut(s) 55, 615, 1152, 1344
FspBI CTAG 1 cut(s) 1233
GlaI GCGC 1 cut(s) 1456
GluI GCNGC 4 cut(s) 55, 615, 1152, 1344
GsaI CCCAGC 2 cut(s) 552, 1013
HaeII RGCGCY 1 cut(s) 1458
HaeIII GGCC 5 cut(s) 87, 891, 1007, 1119, 1411
HapII CCGG 2 cut(s) 1045, 1122
HhaI GCGC 1 cut(s) 1457
Hin1II CATG 7 cut(s) 298, 890, 967, 973, 983, 1148, 1350
Hin6I GCGC 1 cut(s) 1455
HinP1I GCGC 1 cut(s) 1455
HincII GTYRAC 1 cut(s) 634
HindII GTYRAC 1 cut(s) 634
HindIII AAGCTT 1 cut(s) 135
HpaI GTTAAC 1 cut(s) 634
HpaII CCGG 2 cut(s) 1045, 1122
HphI GGTGA 2 cut(s) 274, 1553
Hpy166II GTNNAC 3 cut(s) 634, 944, 1557
Hpy188I TCNGA 8 cut(s) 157, 796, 997, 1055, 1207, 1223, 1264, 1418
Hpy188III TCNNGA 4 cut(s) 226, 523, 660, 1145
Hpy8I GTNNAC 3 cut(s) 634, 944, 1557
Hpy99I CGWCG 1 cut(s) 752
HpyAV CCTTC 5 cut(s) 713, 998, 1055, 1238, 1365
HpyCH4III ACNGT 4 cut(s) 286, 1181, 1277, 1318
HpyF10VI GCNNNNNNNGC 3 cut(s) 134, 611, 1064
HpyF3I CTNAG 3 cut(s) 793, 947, 1328
Hsp92II CATG 7 cut(s) 298, 890, 967, 973, 983, 1148, 1350
HspAI GCGC 1 cut(s) 1455
KspAI GTTAAC 1 cut(s) 634
Kzo9I GATC 3 cut(s) 157, 667, 1184
LmnI GCTCC 4 cut(s) 1039, 1047, 1055, 1488
Lsp1109I GCAGC 4 cut(s) 66, 601, 1163, 1330
LweI GCATC 2 cut(s) 470, 974
MaeI CTAG 1 cut(s) 1233
MaeIII GTNAC 2 cut(s) 580, 1161
MalI GATC 3 cut(s) 159, 669, 1186
MboI GATC 3 cut(s) 157, 667, 1184
MboII GAAGA 8 cut(s) 122, 204, 860, 1114, 1180, 1236, 1442, 1544
MflI RGATCY 1 cut(s) 667
MhlI GDGCHC 2 cut(s) 946, 1044
MlsI TGGCCA 1 cut(s) 1411
MluNI TGGCCA 1 cut(s) 1411
MlyI GAGTC 5 cut(s) 580, 757, 842, 1290, 1428
MmeI TCCRAC 3 cut(s) 430, 506, 1033
Mox20I TGGCCA 1 cut(s) 1411
MscI TGGCCA 1 cut(s) 1411
MseI TTAA 3 cut(s) 327, 336, 633
MslI CAYNNNNRTG 4 cut(s) 64, 293, 539, 968
Msp20I TGGCCA 1 cut(s) 1411
MspI CCGG 2 cut(s) 1045, 1122
MspR9I CCNGG 2 cut(s) 1122, 1504
Mva1269I GAATGC 2 cut(s) 534, 959
MvaI CCWGG 1 cut(s) 1504
MwoI GCNNNNNNNGC 3 cut(s) 134, 611, 1064
NciI CCSGG 1 cut(s) 1122
NcoI CCATGG 1 cut(s) 979
NdeI CATATG 2 cut(s) 61, 1441
NdeII GATC 3 cut(s) 157, 667, 1184
NlaIII CATG 7 cut(s) 298, 890, 967, 973, 983, 1148, 1350
NlaIV GGNNCC 4 cut(s) 352, 879, 1008, 1120
NspV TTCGAA 1 cut(s) 300
PagI TCATGA 1 cut(s) 1144
PctI GAATGC 2 cut(s) 534, 959
PfeI GAWTC 5 cut(s) 233, 366, 800, 1396, 1523
PflMI CCANNNNNTGG 1 cut(s) 887
PkrI GCNGC 4 cut(s) 56, 616, 1153, 1345
PleI GAGTC 5 cut(s) 580, 757, 841, 1290, 1427
PpsI GAGTC 5 cut(s) 580, 757, 841, 1290, 1427
PshAI GACNNNNGTC 1 cut(s) 1300
Psp124BI GAGCTC 1 cut(s) 1044
Psp6I CCWGG 1 cut(s) 1502
PspFI CCCAGC 2 cut(s) 548, 1009
PspGI CCWGG 1 cut(s) 1502
PspN4I GGNNCC 4 cut(s) 352, 879, 1008, 1120
PspPI GGNCC 3 cut(s) 85, 1006, 1118
PsuI RGATCY 1 cut(s) 667
RsaI GTAC 3 cut(s) 263, 809, 1036
RsaNI GTAC 3 cut(s) 262, 808, 1035
RseI CAYNNNNRTG 4 cut(s) 64, 293, 539, 968
SacI GAGCTC 1 cut(s) 1044
SaqAI TTAA 3 cut(s) 327, 336, 633
SatI GCNGC 4 cut(s) 55, 615, 1152, 1344
Sau3AI GATC 3 cut(s) 157, 667, 1184
Sau96I GGNCC 3 cut(s) 85, 1006, 1118
ScaI AGTACT 1 cut(s) 263
SchI GAGTC 5 cut(s) 580, 757, 842, 1290, 1428
ScrFI CCNGG 2 cut(s) 1122, 1504
SduI GDGCHC 2 cut(s) 946, 1044
SfaNI GCATC 2 cut(s) 470, 974
SfuI TTCGAA 1 cut(s) 300
SmiMI CAYNNNNRTG 4 cut(s) 64, 293, 539, 968
SmlI CTYRAG 2 cut(s) 1298, 1306
SmoI CTYRAG 2 cut(s) 1298, 1306
SsiI CCGC 1 cut(s) 1048
SspMI CTAG 1 cut(s) 1233
SstI GAGCTC 1 cut(s) 1044
StyD4I CCNGG 2 cut(s) 1120, 1502
StyI CCWWGG 4 cut(s) 354, 914, 979, 1464
TaaI ACNGT 4 cut(s) 286, 1181, 1277, 1318
TaqI TCGA 9 cut(s) 249, 300, 340, 511, 729, 750, 770, 1491, 1521
TatI WGTACW 2 cut(s) 261, 807
TfiI GAWTC 5 cut(s) 233, 366, 800, 1396, 1523
Tru1I TTAA 3 cut(s) 327, 336, 633
Tru9I TTAA 3 cut(s) 327, 336, 633
TscAI CASTG 4 cut(s) 831, 946, 951, 1282
TseI GCWGC 4 cut(s) 54, 614, 1151, 1343
TspGWI ACGGA 1 cut(s) 1052
TspRI CASTG 4 cut(s) 831, 946, 951, 1282
Van91I CCANNNNNTGG 1 cut(s) 887
VneI GTGCAC 1 cut(s) 942
XapI RAATTY 6 cut(s) 302, 409, 691, 743, 774, 1493
XspI CTAG 1 cut(s) 1233
ZrmI AGTACT 1 cut(s) 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.