MD13G1044200.v1.1

aluminum-activated malate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0012092
Physical Location & Seq
Forward (+)
3071804 .. 3073966
2163 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1044200.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGAAAAGCCACTTTTGGGCAGCTTCAAAGAAGCCGAGTACCAAACAGCAGAAAGCAGGTGCATGTGTTTCAATTCCATGGGGAAAATGATGATGAATTCTTGGAAGGATTTACTAGATTTTGCAGTAAATGCATGGCAAATGGGCCGTTCTGATCCCAGGAAAATCATCTTTGCAATAAAAATGGGACTGGCATTGTCCACGGTTTCTTTGCTAATATTTTGGAAAAAGTCGTATCGCGACGTTGGTCAGTACTCAATCTGGGCTATCCTCACTGTCATTGTGATGTTCGAATTCAGCATCGGAGGGACTTTCATCAAAGGATTTAACCGCGGGTTGGGGACGTTGTTTGCTGGAATGCTTGCATTCTGCTTTGCTGAGTTATCTTTGCTGGCTGCAAAGTTGGAGGAAGTTGTGATTGTCATAAGCATATTTATCGTTGGATTTTTTGCATCTTACTTGAAGCTGTACCCAACAATGAAGCCCTACGAGTACGGCTTTCGGGTTTTCGTGTTGACATACTGCATCCTAATGGTTGCCGGGAACAGAACAAGGGAGTACAGTGAGGCAGTTGTGACTCGACTGGTTCTTATTGGAGTGGGAGCAGCTGTTTGTTTAGTCGTTAACATATGCATATATCCGATATGGTCGGGAGAGGATCTGCATAACTTGGTGGTGAAGAATTTCAAGGGAGTTGCTACTTCATTAGAAGGCTGCGTTAACGGGTACCTAAATTGTGTCGAATATGAGAGGATCCCATCACGAATTCTTACATACCAAGCTGCAGATGATCCACTGTACAAGGGCTATCGATCCGTGGTAGAATCTACAAGCCAAGAAGAAACTCTGTTGGGATTTGCAATCTGGGAACCACCTCATGGGCGTTACAAAATGTTCAATTATCCTTGGACAAATTTTGTGAAATTAAATGGTGCATTGAAGCATTGTGCGTTTATGGTCATGGCTCTACATGGATGCATTCTTTCCGAAATACAGGCACCAGCAGAAAAGAGGCAGGTTTTGCGCGACGAACTCCAGCGGGTTGGAGCTGAAGGTGCCAAAGTTTTGCGAGAACTCGCCAAGAAAGTGGAGAAGATGGAAAAATTAGGCTCCGGAGACATACTCAAAGACGTGCAACGGGCAGCAGAGGAATTGCAGAAGAAGATAGACCGGAGATCGTATCTTCTGGTCAATTCAGAGAGTTGGGAAATTAGTGCACCACAAAATGCTTCGTCAGAGGACATGCTTGGGGACCAAGCATCTCGGCCCTTGCCTCTCTCATTCAGTGGTGGCGATGGAGTGATGAAGGAATATAACTGTGGAACATATGAAAGCGCGAGCGCCTTGTCCTTGGCCACGTTTGCTTCGCTGCTGATTGAGTTTGTTGCCCGGCTTCAAAATGTGGTTGACACGTTCCAAGAGCTCGGTGAGAAAGCAGACTTCAAGGCGTTTGTTCCGGATGCACCACCTGCAAAGAAGAAATCTGGGACTTGGCCCTGGCAGTGGCGGATTCGGTGTTTCGGGTATAAAAGTGTTATGAATGAAACCAGGGAGGGTCGGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ALMT

Protein Analysis

522

Amino Acids

58.64

Weight (kDa)

8.44

Isoelectric Point (pI)

26.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 46 - 413 2.4e-164 Aluminium activated malate transporter
FUSC_2 PF13515 84 - 208 7e-11 Fusaric acid resistance protein-like
ALMT PF11744 435 - 476 1.1e-08 Aluminium activated malate transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012092)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68600 AT2G17470 AT2G17470
fragaria_vesca FvH4_4g27680
malus_domestica MD13G1044200.v1.1 MD16G1045000.v1.1
prunus_persica Prupe.1G308300_v2.0.a1 Prupe.1G308300_v2.0.a1 Prupe.1G308300_v2.0.a1
pyrus_communis pycom13g03880
rosa_chinensis RchiOBHm_Chr4g0435521
rosa_laevigata RLG00000006585
rosa_multiflora Rmu_sc0001940.1_g000033
rosa_roxburghii Rroxscaffold_5G00376750
rosa_rugosa Rorug04G0285900
rosa_samantha Rh4BG349800 Rh4CG364500 Rh4DG344100
rosa_wichuraiana Rw4G029800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 48, 1477
Acc36I ACCTGC 3 cut(s) 48, 1006, 1477
Acc65I GGTACC 1 cut(s) 726
AccB1I GGYRCC 3 cut(s) 726, 997, 1055
AccB7I CCANNNNNTGG 1 cut(s) 878
AccII CGCG 4 cut(s) 240, 333, 1026, 1337
AccIII TCCGGA 2 cut(s) 1112, 1456
AciI CCGC 4 cut(s) 331, 333, 1039, 1507
AclWI GGATC 6 cut(s) 149, 666, 748, 761, 785, 807
AcoI YGGCCR 1 cut(s) 1353
AcsI RAATTY 5 cut(s) 97, 293, 682, 765, 913
AcuI CTGAAG 1 cut(s) 1071
AfaI GTAC 7 cut(s) 41, 254, 470, 494, 560, 728, 800
AfiI CCNNNNNNNGG 4 cut(s) 17, 337, 878, 1503
AflIII ACRYGT 1 cut(s) 1410
AgsI TTSAA 8 cut(s) 28, 73, 463, 688, 898, 940, 1397, 1444
AjiI CACGTC 1 cut(s) 1132
AjnI CCWGG 3 cut(s) 158, 1496, 1547
AluBI AGCT 6 cut(s) 24, 466, 608, 782, 1049, 1423
AluI AGCT 6 cut(s) 24, 466, 608, 782, 1049, 1423
Alw21I GWGCWC 2 cut(s) 1219, 1425
Alw26I GTCTC 1 cut(s) 1110
Alw44I GTGCAC 1 cut(s) 1215
AlwI GGATC 6 cut(s) 149, 666, 748, 761, 785, 807
Aor13HI TCCGGA 2 cut(s) 1112, 1456
AoxI GGCC 4 cut(s) 145, 1265, 1353, 1493
ApaLI GTGCAC 1 cut(s) 1215
ApeKI GCWGC 7 cut(s) 21, 395, 605, 714, 782, 1142, 1369
ApoI RAATTY 5 cut(s) 97, 293, 682, 765, 913
Asp700I GAANNNNTTC 1 cut(s) 683
Asp718I GGTACC 1 cut(s) 726
AspLEI GCGC 3 cut(s) 1026, 1337, 1343
AspS9I GGNCC 4 cut(s) 145, 1252, 1266, 1494
AsuC2I CCSGG 2 cut(s) 541, 1390
AsuHPI GGTGA 2 cut(s) 688, 1439
AsuII TTCGAA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 1252
BaeGI GKGCMC 1 cut(s) 1219
BalI TGGCCA 1 cut(s) 1355
BamHI GGATCC 1 cut(s) 753
BanI GGYRCC 3 cut(s) 726, 997, 1055
BanII GRGCYC 1 cut(s) 1425
Bbv12I GWGCWC 2 cut(s) 1219, 1425
BbvI GCAGC 7 cut(s) 33, 382, 617, 701, 769, 1154, 1356
BccI CCATC 3 cut(s) 766, 1090, 1289
BceAI ACGGC 2 cut(s) 132, 511
BcgI CGANNNNNNTGC 2 cut(s) 418, 452
BciT130I CCWGG 3 cut(s) 160, 1498, 1549
BcnI CCSGG 2 cut(s) 541, 1390
BcoDI GTCTC 1 cut(s) 1110
BfaI CTAG 1 cut(s) 116
BfmI CTRYAG 1 cut(s) 783
BfoI RGCGCY 1 cut(s) 1344
BfuAI ACCTGC 3 cut(s) 48, 1006, 1477
BisI GCNGC 7 cut(s) 22, 396, 606, 715, 783, 1143, 1370
BlsI GCNGC 7 cut(s) 23, 397, 607, 716, 784, 1144, 1371
BmcAI AGTACT 1 cut(s) 254
Bme1390I CCNGG 5 cut(s) 160, 541, 1390, 1498, 1549
Bme18I GGWCC 1 cut(s) 1252
BmgBI CACGTC 1 cut(s) 1132
BmgT120I GGNCC 4 cut(s) 145, 1252, 1266, 1494
BmiI GGNNCC 7 cut(s) 728, 755, 870, 999, 1057, 1111, 1253
BmrFI CCNGG 5 cut(s) 160, 541, 1390, 1498, 1549
BmsI GCATC 6 cut(s) 309, 461, 534, 965, 1268, 1450
BoxI GACNNNNGTC 1 cut(s) 246
BplI GAGNNNNNCTC 2 cut(s) 1107, 1139
BpmI CTGGAG 1 cut(s) 1019
Bpu14I TTCGAA 1 cut(s) 291
BpuMI CCSGG 2 cut(s) 541, 1390
Bsa29I ATCGAT 1 cut(s) 811
BsaJI CCNNGG 9 cut(s) 78, 158, 201, 331, 816, 905, 1350, 1496, 1548
BsaWI WCCGGW 3 cut(s) 1112, 1170, 1456
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 4 cut(s) 17, 337, 878, 1503
Bse1I ACTGG 2 cut(s) 195, 588
BseAI TCCGGA 2 cut(s) 1112, 1456
BseBI CCWGG 3 cut(s) 160, 1498, 1549
BseCI ATCGAT 1 cut(s) 811
BseDI CCNNGG 9 cut(s) 78, 158, 201, 331, 816, 905, 1350, 1496, 1548
BseGI GGATG 3 cut(s) 525, 980, 1465
BseLI CCNNNNNNNGG 4 cut(s) 17, 337, 878, 1503
BseMII CTCAG 1 cut(s) 369
BseNI ACTGG 2 cut(s) 195, 588
BseSI GKGCMC 1 cut(s) 1219
BseXI GCAGC 7 cut(s) 33, 382, 617, 701, 769, 1154, 1356
Bsh1236I CGCG 4 cut(s) 240, 333, 1026, 1337
BshFI GGCC 4 cut(s) 147, 1267, 1355, 1495
BshNI GGYRCC 3 cut(s) 726, 997, 1055
BshVI ATCGAT 1 cut(s) 811
BsiHKAI GWGCWC 2 cut(s) 1219, 1425
BsiSI CCGG 5 cut(s) 540, 1113, 1171, 1390, 1457
BslFI GGGAC 5 cut(s) 201, 322, 355, 1265, 1501
BslI CCNNNNNNNGG 4 cut(s) 17, 337, 878, 1503
BsmAI GTCTC 1 cut(s) 1110
BsmFI GGGAC 5 cut(s) 201, 322, 355, 1265, 1501
BsmI GAATGC 3 cut(s) 363, 365, 978
BsnI GGCC 4 cut(s) 147, 1267, 1355, 1495
Bsp119I TTCGAA 1 cut(s) 291
Bsp1286I GDGCHC 2 cut(s) 1219, 1425
Bsp13I TCCGGA 2 cut(s) 1112, 1456
Bsp1407I TGTACA 1 cut(s) 798
Bsp143I GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
Bsp19I CCATGG 1 cut(s) 78
Bsp68I TCGCGA 1 cut(s) 240
BspACI CCGC 4 cut(s) 331, 333, 1039, 1507
BspANI GGCC 4 cut(s) 147, 1267, 1355, 1495
BspCNI CTCAG 1 cut(s) 370
BspDI ATCGAT 1 cut(s) 811
BspEI TCCGGA 2 cut(s) 1112, 1456
BspFNI CGCG 4 cut(s) 240, 333, 1026, 1337
BspLI GGNNCC 7 cut(s) 728, 755, 870, 999, 1057, 1111, 1253
BspMAI CTGCAG 1 cut(s) 787
BspMI ACCTGC 3 cut(s) 48, 1006, 1477
BspPI GGATC 6 cut(s) 149, 666, 748, 761, 785, 807
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 3 cut(s) 726, 997, 1055
BsrGI TGTACA 1 cut(s) 798
BsrI ACTGG 2 cut(s) 195, 588
BssECI CCNNGG 9 cut(s) 78, 158, 201, 331, 816, 905, 1350, 1496, 1548
BssMI GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
BssT1I CCWWGG 3 cut(s) 78, 905, 1350
Bst2UI CCWGG 3 cut(s) 160, 1498, 1549
Bst4CI ACNGT 5 cut(s) 205, 277, 563, 798, 1319
BstAPI GCANNNNNTGC 3 cut(s) 131, 1021, 1469
BstAUI TGTACA 1 cut(s) 798
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 3 cut(s) 363, 393, 1339
BstDEI CTNAG 1 cut(s) 378
BstDSI CCRYGG 4 cut(s) 78, 201, 331, 816
BstF5I GGATG 3 cut(s) 525, 980, 1465
BstFNI CGCG 4 cut(s) 240, 333, 1026, 1337
BstH2I RGCGCY 1 cut(s) 1344
BstHHI GCGC 3 cut(s) 1026, 1337, 1343
BstKTI GATC 6 cut(s) 157, 661, 756, 793, 815, 1178
BstMAI GTCTC 1 cut(s) 1110
BstMBI GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
BstMWI GCNNNNNNNGC 5 cut(s) 131, 1021, 1055, 1361, 1469
BstNI CCWGG 3 cut(s) 160, 1498, 1549
BstNSI RCATGY 2 cut(s) 67, 1246
BstPAI GACNNNNGTC 1 cut(s) 246
BstSCI CCNGG 5 cut(s) 158, 539, 1388, 1496, 1547
BstSFI CTRYAG 1 cut(s) 783
BstSLI GKGCMC 1 cut(s) 1219
BstUI CGCG 4 cut(s) 240, 333, 1026, 1337
BstV1I GCAGC 7 cut(s) 33, 382, 617, 701, 769, 1154, 1356
BstX2I RGATCY 2 cut(s) 658, 753
BstXI CCANNNNNNTGG 2 cut(s) 1043, 1087
BstYI RGATCY 2 cut(s) 658, 753
Bsu15I ATCGAT 1 cut(s) 811
BsuRI GGCC 4 cut(s) 147, 1267, 1355, 1495
BsuTUI ATCGAT 1 cut(s) 811
BtgI CCRYGG 4 cut(s) 78, 201, 331, 816
BtgZI GCGATG 1 cut(s) 1308
BtrI CACGTC 1 cut(s) 1132
BtsCI GGATG 3 cut(s) 525, 980, 1465
BtsI GCAGTG 1 cut(s) 1508
BtsIMutI CAGTG 5 cut(s) 273, 568, 794, 1291, 1508
BtuMI TCGCGA 1 cut(s) 240
BveI ACCTGC 3 cut(s) 48, 1006, 1477
Cac8I GCNNGC 3 cut(s) 363, 393, 1339
CfoI GCGC 3 cut(s) 1026, 1337, 1343
Cfr13I GGNCC 4 cut(s) 145, 1252, 1266, 1494
Cfr42I CCGCGG 1 cut(s) 334
ClaI ATCGAT 1 cut(s) 811
Csp6I GTAC 7 cut(s) 40, 253, 469, 493, 559, 727, 799
CviAII CATG 7 cut(s) 64, 79, 135, 878, 961, 971, 1243
CviQI GTAC 7 cut(s) 40, 253, 469, 493, 559, 727, 799
DdeI CTNAG 1 cut(s) 378
DpnI GATC 6 cut(s) 156, 660, 755, 792, 814, 1177
DpnII GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
EaeI YGGCCR 1 cut(s) 1353
EciI GGCGGA 1 cut(s) 1522
Ecl136II GAGCTC 1 cut(s) 1423
Eco130I CCWWGG 3 cut(s) 78, 905, 1350
Eco24I GRGCYC 1 cut(s) 1425
Eco47I GGWCC 1 cut(s) 1252
Eco53kI GAGCTC 1 cut(s) 1423
Eco57I CTGAAG 1 cut(s) 1071
EcoICRI GAGCTC 1 cut(s) 1423
EcoRI GAATTC 3 cut(s) 97, 293, 765
EcoRII CCWGG 3 cut(s) 158, 1496, 1547
EcoT14I CCWWGG 3 cut(s) 78, 905, 1350
EcoT22I ATGCAT 3 cut(s) 136, 635, 980
EcoT38I GRGCYC 1 cut(s) 1425
ErhI CCWWGG 3 cut(s) 78, 905, 1350
FaeI CATG 7 cut(s) 67, 82, 138, 881, 964, 974, 1246
FaqI GGGAC 5 cut(s) 201, 322, 355, 1265, 1501
FatI CATG 7 cut(s) 63, 78, 134, 877, 960, 970, 1242
FauI CCCGC 2 cut(s) 326, 1032
FauNDI CATATG 2 cut(s) 629, 1327
Fnu4HI GCNGC 7 cut(s) 22, 396, 606, 715, 783, 1143, 1370
FokI GGATG 3 cut(s) 512, 987, 1472
FriOI GRGCYC 1 cut(s) 1425
Fsp4HI GCNGC 7 cut(s) 22, 396, 606, 715, 783, 1143, 1370
FspBI CTAG 1 cut(s) 116
GlaI GCGC 3 cut(s) 1025, 1336, 1342
GluI GCNGC 7 cut(s) 22, 396, 606, 715, 783, 1143, 1370
GsuI CTGGAG 1 cut(s) 1019
HaeII RGCGCY 1 cut(s) 1344
HaeIII GGCC 4 cut(s) 147, 1267, 1355, 1495
HapII CCGG 5 cut(s) 540, 1113, 1171, 1390, 1457
HhaI GCGC 3 cut(s) 1026, 1337, 1343
Hin1II CATG 7 cut(s) 67, 82, 138, 881, 964, 974, 1246
Hin6I GCGC 3 cut(s) 1024, 1335, 1341
HinP1I GCGC 3 cut(s) 1024, 1335, 1341
HincII GTYRAC 4 cut(s) 516, 625, 721, 1408
HindII GTYRAC 4 cut(s) 516, 625, 721, 1408
HinfI GANTC 3 cut(s) 577, 824, 1510
HpaI GTTAAC 2 cut(s) 625, 721
HpaII CCGG 5 cut(s) 540, 1113, 1171, 1390, 1457
HphI GGTGA 2 cut(s) 688, 1439
Hpy166II GTNNAC 6 cut(s) 201, 516, 625, 721, 1217, 1408
Hpy188I TCNGA 6 cut(s) 154, 305, 642, 988, 1198, 1237
Hpy188III TCNNGA 5 cut(s) 239, 651, 762, 1113, 1457
Hpy8I GTNNAC 6 cut(s) 201, 516, 625, 721, 1217, 1408
Hpy99I CGWCG 2 cut(s) 245, 1031
HpyAV CCTTC 4 cut(s) 100, 704, 1046, 1300
HpyCH4III ACNGT 5 cut(s) 205, 277, 563, 798, 1319
HpyCH4IV ACGT 5 cut(s) 243, 344, 1131, 1358, 1412
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 1021, 1055, 1361, 1469
HpyF3I CTNAG 1 cut(s) 378
HpySE526I ACGT 5 cut(s) 243, 344, 1131, 1358, 1412
Hsp92II CATG 7 cut(s) 67, 82, 138, 881, 964, 974, 1246
HspAI GCGC 3 cut(s) 1024, 1335, 1341
Kpn2I TCCGGA 2 cut(s) 1112, 1456
KpnI GGTACC 1 cut(s) 730
KspAI GTTAAC 2 cut(s) 625, 721
KspI CCGCGG 1 cut(s) 334
Kzo9I GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
LmnI GCTCC 3 cut(s) 602, 1046, 1115
Lsp1109I GCAGC 7 cut(s) 33, 382, 617, 701, 769, 1154, 1356
LweI GCATC 6 cut(s) 309, 461, 534, 965, 1268, 1450
MaeI CTAG 1 cut(s) 116
MaeII ACGT 5 cut(s) 243, 344, 1131, 1358, 1412
MaeIII GTNAC 2 cut(s) 574, 884
MalI GATC 6 cut(s) 156, 660, 755, 792, 814, 1177
MboI GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
MboII GAAGA 7 cut(s) 691, 851, 1105, 1171, 1174, 1175, 1489
MflI RGATCY 2 cut(s) 658, 753
MhlI GDGCHC 2 cut(s) 1219, 1425
MlsI TGGCCA 1 cut(s) 1355
MluNI TGGCCA 1 cut(s) 1355
MlyI GAGTC 1 cut(s) 571
MmeI TCCRAC 3 cut(s) 384, 421, 1024
Mox20I TGGCCA 1 cut(s) 1355
Mph1103I ATGCAT 3 cut(s) 136, 635, 980
MroI TCCGGA 2 cut(s) 1112, 1456
MroXI GAANNNNTTC 1 cut(s) 683
MscI TGGCCA 1 cut(s) 1355
MseI TTAA 4 cut(s) 327, 624, 720, 926
MslI CAYNNNNRTG 2 cut(s) 284, 530
Msp20I TGGCCA 1 cut(s) 1355
MspA1I CMGCKG 3 cut(s) 333, 608, 1039
MspI CCGG 5 cut(s) 540, 1113, 1171, 1390, 1457
MspR9I CCNGG 5 cut(s) 160, 541, 1390, 1498, 1549
Mva1269I GAATGC 3 cut(s) 363, 365, 978
MvaI CCWGG 3 cut(s) 160, 1498, 1549
MvnI CGCG 4 cut(s) 240, 333, 1026, 1337
MwoI GCNNNNNNNGC 5 cut(s) 131, 1021, 1055, 1361, 1469
NciI CCSGG 2 cut(s) 541, 1390
NcoI CCATGG 1 cut(s) 78
NdeI CATATG 2 cut(s) 629, 1327
NdeII GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
NlaIII CATG 7 cut(s) 67, 82, 138, 881, 964, 974, 1246
NlaIV GGNNCC 7 cut(s) 728, 755, 870, 999, 1057, 1111, 1253
NmeAIII GCCGAG 2 cut(s) 61, 1243
NmuCI GTSAC 1 cut(s) 574
NruI TCGCGA 1 cut(s) 240
NsiI ATGCAT 3 cut(s) 136, 635, 980
NspI RCATGY 2 cut(s) 67, 1246
NspV TTCGAA 1 cut(s) 291
PaqCI CACCTGC 2 cut(s) 48, 1477
PctI GAATGC 3 cut(s) 363, 365, 978
PdmI GAANNNNTTC 1 cut(s) 683
PfeI GAWTC 2 cut(s) 824, 1510
PflMI CCANNNNNTGG 1 cut(s) 878
PkrI GCNGC 7 cut(s) 23, 397, 607, 716, 784, 1144, 1371
PleI GAGTC 1 cut(s) 571
PpsI GAGTC 1 cut(s) 571
PshAI GACNNNNGTC 1 cut(s) 246
Psp124BI GAGCTC 1 cut(s) 1425
Psp6I CCWGG 3 cut(s) 158, 1496, 1547
PspGI CCWGG 3 cut(s) 158, 1496, 1547
PspN4I GGNNCC 7 cut(s) 728, 755, 870, 999, 1057, 1111, 1253
PspPI GGNCC 4 cut(s) 145, 1252, 1266, 1494
PstI CTGCAG 1 cut(s) 787
PsuI RGATCY 2 cut(s) 658, 753
PvuII CAGCTG 1 cut(s) 608
RruI TCGCGA 1 cut(s) 240
RsaI GTAC 7 cut(s) 41, 254, 470, 494, 560, 728, 800
RsaNI GTAC 7 cut(s) 40, 253, 469, 493, 559, 727, 799
RseI CAYNNNNRTG 2 cut(s) 284, 530
SacI GAGCTC 1 cut(s) 1425
SacII CCGCGG 1 cut(s) 334
SaqAI TTAA 4 cut(s) 327, 624, 720, 926
SatI GCNGC 7 cut(s) 22, 396, 606, 715, 783, 1143, 1370
Sau3AI GATC 6 cut(s) 154, 658, 753, 790, 812, 1175
Sau96I GGNCC 4 cut(s) 145, 1252, 1266, 1494
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 1 cut(s) 571
ScrFI CCNGG 5 cut(s) 160, 541, 1390, 1498, 1549
SduI GDGCHC 2 cut(s) 1219, 1425
SfaNI GCATC 6 cut(s) 309, 461, 534, 965, 1268, 1450
SfcI CTRYAG 1 cut(s) 783
Sfr303I CCGCGG 1 cut(s) 334
SfuI TTCGAA 1 cut(s) 291
SgrBI CCGCGG 1 cut(s) 334
SinI GGWCC 1 cut(s) 1252
SmiMI CAYNNNNRTG 2 cut(s) 284, 530
SsiI CCGC 4 cut(s) 331, 333, 1039, 1507
SspI AATATT 1 cut(s) 219
SspMI CTAG 1 cut(s) 116
SstI GAGCTC 1 cut(s) 1425
StyD4I CCNGG 5 cut(s) 158, 539, 1388, 1496, 1547
StyI CCWWGG 3 cut(s) 78, 905, 1350
TaaI ACNGT 5 cut(s) 205, 277, 563, 798, 1319
TaiI ACGT 5 cut(s) 246, 347, 1134, 1361, 1415
TaqI TCGA 4 cut(s) 291, 580, 741, 811
TatI WGTACW 3 cut(s) 252, 558, 798
TfiI GAWTC 2 cut(s) 824, 1510
Tru1I TTAA 4 cut(s) 327, 624, 720, 926
Tru9I TTAA 4 cut(s) 327, 624, 720, 926
TscAI CASTG 5 cut(s) 280, 568, 801, 1291, 1508
TseFI GTSAC 1 cut(s) 574
TseI GCWGC 7 cut(s) 21, 395, 605, 714, 782, 1142, 1369
Tsp45I GTSAC 1 cut(s) 574
TspDTI ATGAA 8 cut(s) 110, 304, 494, 693, 1319, 1344, 1553, 1557
TspGWI ACGGA 1 cut(s) 805
TspRI CASTG 5 cut(s) 280, 568, 801, 1291, 1508
Van91I CCANNNNNTGG 1 cut(s) 878
VneI GTGCAC 1 cut(s) 1215
VpaK11BI GGWCC 1 cut(s) 1252
XapI RAATTY 5 cut(s) 97, 293, 682, 765, 913
XceI RCATGY 2 cut(s) 67, 1246
XmnI GAANNNNTTC 1 cut(s) 683
XspI CTAG 1 cut(s) 116
ZrmI AGTACT 1 cut(s) 254
Zsp2I ATGCAT 3 cut(s) 136, 635, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.