FvH4_4g31060

Cell division cycle and apoptosis regulator protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
30372143 .. 30381934
9792 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g31060.t4

Sequence Viewer

Length: 4092 bp
ATGTATACGTCCAGAGGGAACAATGCCTATGGACAACAGTCATATGCTGGGCAATCTGCATATGGCCAAAATTTGGGACCGGGTTATCCTGCAAATTCAGTCGGAGGGCCTGATGGGAATGTGCAGCTTCCCATGGTTGCGCGGCATTCAGCAATGTTAGGGGGTTCAGAGGAAGTAGATGCCAATGCGTACAGACCACTTCCTGCAGCTGCTGCTCATTATGGGGGACAGTATAGCTCTCTCTATGGTTCAGCTGCTTTGAGCACTGCACCTCAGGCTCCTCCCATTGGTGCAAAAGGTTCAGGACCATCGGTCTTGGAAAGTCGTGGTGTCTTTGCTTCGGCTAAGCAAGATTCGCCAAAATTTTCATCCGGGGAGTATATCCCAGCTTCAAGTCATGCACAACTGTATGGCGAGAAGGGTCCTGATTATCCAACTATTGACAGAAGGCAGTATGGTCGTCAGAGTGGTTATATGGGAAGGGACTTGCAAAGTGACCCAACTGGTCGATTTGCCGATTCTGTTGGTTTCGGTCCTCAGCATCAGGCTGAGATTTATGATCGCATTGATAAGGCGGTGCTGCTTCGGCAAGAACAGTTGCTGAAAGCTCATTCTCTGCAATCTGCTTCTCTTGAAGGGAGTGCAAGACAAGCTGATTATCTTGCAGCAAGGGGTGCCTCTAGTCGTCATCCCACTCAAGAACTTACTTCTTTTGGAGGAAGAATGGACGGTGATCCTCGCAATTTATCGATGCTTACTGGTTCTTCATATGGCGAACAACCTGCTCCATCAATATTAGGGGCAGCTCCACGGAGAAATGCAGATGACCTCTTATATTCACAAAATCCTTCGAATCCTGGTTATGGAGTCAGCCTTCCTCCTGGGAGGGATTACGGCAGCGGAAAAGGGCTCCATGTCTCATCACTTGAGCCAGATTATCCAATTAGTTTGTCTCATGGTGGTCATCCGAGGATCGATGAACGCAAGGATGACAGAGCTAGCTATCTTCAAGAATTTGAACTAAGGGAGGAGGCACGGCGTCGAGATCGTTTACGTGAGAGAGAGAGGGATAGAGAAAGGGAGAAGGAATGGGACCGTGAACGTGAACGCGAGCGAGAACGAGAAAGAGAGCGTGAAAGAAGCATTTTGGAGCGGCGATTGAAGGACAGAGAGCGAGAACGCAAGCGTGCAATTGACACCAGGAGGGAACGAACTCCACCGAGAGTCTCTAGGGATCGTCGCGCTGCGTCTTTGGTGAAGGAGGGGAGATCTTTACGACGGGATTCCCCACATCTTGAAGCTCCGCATAGGCGTCATTCACCTGTTAAAGATAAACGGAGAGAGTATGTCTGCAAGGTTTACTCAAACAGTCTGATAGATGTAGAAAGGGATTATCTTTCGATGGATAAACGATATCCCAGGCTCTTTATACCATCTGAATTCTGCAAGGCTGTTGTAAGCTGGCCAAGGGAGAACCTTCAACTTTCTATCCGGACTCCTGTCAGTTTTGAGCATGATTTCGTGGAAGAAGAGGGTGCAGCTGTTATGAAAGAGCCAACAGCTACAATATTGGCTGAAGAACCTGCAAAATCAGGAGGTGGAAATATTGTGTGGAATGTGAGGATTATCTTGATGAGTGGGATAAGCAAGAATGCTTTGGAGGAGCTATCATCTGAAAGAAGTCATGATGATCGCATACCCCATATCTGCAATATCATTAGGTTTGCCATTCTTAAAAAGGACCGCTCATTCTTGACAATTGGTGGTCCATGGAATCCCACCGATGGTGGTGATCCGTCAGTTGATGATAGCTCTTTAATTCATACTGCAATAAGATATGGGAAGGATGTTGCAAAACTTGATCTGCAGAACTGCAAGAACTGGAATCGTTTTCTTGAGATACACTATGATAGAATTGGGAAAGATGGATTCTTTAGCCATAAAGAGATAACTGTCATATTTGTCCCAGATTTGTCTGAGTGTCTCCCTTCATTGGATGCATGGCGAGACCAATGGCTTGCACACAAGAAAGCTGTTGCAGAAAGAGAGCGTCAGCTTTCTCTGAGAAAAGAGAGACTGAGGGACAAGGAAGTGCTCAAAGATAAGGAAATTGAATCATCAAAACAAAAAAGAACAGACAAAGAAGTAAAAACTAAAGAGTCTGCATCCACTGGAGAAGCAAAAGAAGTTAAGAACAAGGAACAAGATGGCAATAGTCCAAATGGGAGTACATCTGAAGGAAAGAATGATATGAACGATAAGAAGCATGATACAAAAGATGACAGCGGAGGCAGCGAGACAGGCAAGAATGAGGAGAAAAAGGAACAGGTAGAAGCTGCTGAAATTCAGACACCTGGAAGTGCGAAGTCTGGGAAGAAGAAGATTGTAAGAAGGGTTGTCAAACAGAAGGTTGTAGGTAAATCAGCCAGTGATAGTACAACCAAGGAACCTGACAATGTGGGTGAGAAGGATAACACTGAAGGGGAAAAAGAAAATCCCGAGGCTCCTGGTGAAGATGATTCTTCACCTGATCCTGCTGGGGTCAAAACCTTTAAGAGAAAAAGAATTGTTAAGAAGGTTTCAGTTGCGAAGGCTGCTCAGAATGAAGATAATACAAACACAGAGGTGAAAGTTGGGCAGGAAACTGGCTGCTCTGAGGAGAAAGCTGAACCAAGCAGTGGTCCAGCTGTGCAAGATACTAATGCAAAAACAGTAGTCAAGAAGAAAATAATTAAGAAGGTTGCTAAAAGAAAGGTTGCTGGTGCGGAACTGAGCAAAGGGGTTGATGTTGATCAGAAAAATGTCGTTGGAAATGAAACAGAAAGTACACAGAAAACAACAGCAGTTGTGGAAAAGCCAGCAGCAAAGGGCTCAAAAACAGAAGTACCTGACAAGCAAAAAGATGTTGTCAGTTCAACTAAAGCAGATTCAAAAGATGTTAAGGAGGATAAGAAAGATGAGAAGCGAGCTGGTGACAAAAGTGGTTCTGTTACTAAAGCAGAGAGGAGCAAATCAAAAGATGCTGAAAAATCCAAAGATGAGAAGGAAAAGAGAGATGGAAAAGATGAGTCTAGGGCCAAATTAACTAGAGAAGGGAAAGAAACGAGAAAGCCTGAAGAACCACCTCGACACCCTGGATTCATTCTACAAACAAAATTGAGCAAGGACTCCAAACTGCGTTCATCATCACTTTCACTTGATTTACTATTGGACTATACTGACAAGGATATTGAAGAATCAACATTTGAGCTTTCTGTATTTGCTGAAACATTCTATGAGATGCTCCAGCATCAGATGGGATGTCGTCTTTTAATATTTCTCCAGAAACTGCGAATAAAGTTTGTGACAAAAAGAAACCAACGTAAGAGGCAACGAGAAGAAGAAAATGTTAAGAAAGCGAATGCTGAGAACTCACCAGCAAAGCGCCTGAAGACGGATGAGCTCCCTGTGAAAGATCAGCCTGCTAAATCATCTGAAACATTGGGTGCATCTCAGCCTGATATCGTGAAGCAAGAGGAAGAAAAAGCTATAACTATTTCCAAGGAGAGTAGTTCTGTTGACCATGTTGATGAGGTGAAAATGGAGCATGCAACAGATGATGATGAAGATCCAGAAGAAGATCCTGAGGAAGATCCTGAAGAATATGAACCAATGGAGGATGGAAGTCCTCCTCATGACTCCAATGAGATTATCGAGAAAGAAGGCAAAAGCAATGTGAATGCTGTGTCTGGAAATGAGAAAGATGAAGTCAATGTTAAAGAAGAAAAGGACGTGAAGGCTGAAGAAACGGAGGCCAAACCAGAAGCAGATATGTGTATCAAGAAAGAGGAGAAAGTTGATACACACAAGAAAGAAACTCCCGGGGCAAAGGAGGTTGTTGACAAGGAACTACTGCAGGCTTTTAGGTTCTTTGACAGGAATCAAGTCGGCCACATTAGGGTTGAAGATATGAGATTGATAATCCATAACTTGGGCAAGTTCCTCTCGCACAGGGATGTCAAGGAGCTTGTGCAGAGTGCATTAATAGAGAGCAACACAGCTAGGGATGACCGCATTCTTTACAAAAAGCTGGTGCGGATGACTGACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1364

Amino Acids

152.88

Weight (kDa)

6.81

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBC1 PF14443 327 - 444 3.1e-43 DBC1
LAIKA PF19256 800 - 862 2.6e-19 LAIKA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 790, 1591
AccB1I GGYRCC 1 cut(s) 674
AccB7I CCANNNNNTGG 3 cut(s) 73, 2678, 3970
AccBSI CCGCTC 2 cut(s) 1153, 1746
AccI GTMKAC 1 cut(s) 5
AccII CGCG 3 cut(s) 142, 1110, 1242
AccIII TCCGGA 1 cut(s) 1491
AclWI GGATC 8 cut(s) 728, 980, 1242, 1787, 2525, 3602, 3614, 3626
AcoI YGGCCR 3 cut(s) 64, 1463, 3928
AcsI RAATTY 6 cut(s) 70, 94, 362, 1013, 1439, 2343
AcuI CTGAAG 7 cut(s) 1596, 2256, 2499, 3135, 3449, 3657, 3801
AcyI GRCGYC 2 cut(s) 1039, 1312
AfaI GTAC 5 cut(s) 191, 2230, 2437, 2827, 2886
AfiI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 1784, 1993, 2678, 3433, 3937, 3970
AhdI GACNNNNNGTC 1 cut(s) 311
AjiI CACGTC 1 cut(s) 3772
AjnI CCWGG 7 cut(s) 856, 880, 1199, 1418, 2353, 2506, 3133
AleI CACNNNNGTG 1 cut(s) 2624
Alw21I GWGCWC 3 cut(s) 266, 2097, 3444
Alw26I GTCTC 7 cut(s) 922, 957, 1231, 1988, 2001, 2068, 2291
AlwI GGATC 8 cut(s) 728, 980, 1242, 1787, 2525, 3602, 3614, 3626
AlwNI CAGNNNCTG 3 cut(s) 212, 601, 3328
Ama87I CYCGRG 2 cut(s) 2498, 3860
Aor13HI TCCGGA 1 cut(s) 1491
AoxI GGCC 6 cut(s) 64, 107, 1463, 3075, 3792, 3928
ApoI RAATTY 6 cut(s) 70, 94, 362, 1013, 1439, 2343
AseI ATTAAT 1 cut(s) 4022
AspLEI GCGC 3 cut(s) 142, 1244, 3426
AsuC2I CCSGG 4 cut(s) 81, 373, 3861, 3862
AsuII TTCGAA 1 cut(s) 851
AsuNHI GCTAGC 1 cut(s) 998
AvaI CYCGRG 2 cut(s) 2498, 3860
AvaII GGWCC 8 cut(s) 77, 305, 422, 533, 1093, 1741, 1766, 2681
AxyI CCTNAGG 2 cut(s) 273, 3624
BaeI ACNNNNGTAYC 2 cut(s) 2868, 2901
BalI TGGCCA 2 cut(s) 66, 1465
BanI GGYRCC 1 cut(s) 674
BanII GRGCYC 3 cut(s) 912, 2873, 3444
BbsI GAAGAC 1 cut(s) 3437
Bbv12I GWGCWC 3 cut(s) 266, 2097, 3444
BbvCI CCTCAGC 1 cut(s) 537
BceAI ACGGC 2 cut(s) 910, 1052
BcgI CGANNNNNNTGC 4 cut(s) 440, 474, 764, 798
BciT130I CCWGG 7 cut(s) 858, 882, 1201, 1420, 2355, 2508, 3135
BclI TGATCA 1 cut(s) 2791
BcnI CCSGG 4 cut(s) 81, 373, 3861, 3862
BcoDI GTCTC 7 cut(s) 922, 957, 1231, 1988, 2001, 2068, 2291
BfaI CTAG 6 cut(s) 681, 999, 1230, 3072, 3087, 4041
BfmI CTRYAG 3 cut(s) 204, 1865, 3893
BfoI RGCGCY 1 cut(s) 3427
BfuAI ACCTGC 2 cut(s) 790, 1591
BglII AGATCT 1 cut(s) 1268
BlpI GCTNAGC 1 cut(s) 345
Bme18I GGWCC 8 cut(s) 77, 305, 422, 533, 1093, 1741, 1766, 2681
BmeRI GACNNNNNGTC 1 cut(s) 311
BmeT110I CYCGRG 2 cut(s) 2498, 3860
BmgBI CACGTC 1 cut(s) 3772
BmiI GGNNCC 8 cut(s) 78, 279, 423, 676, 911, 1094, 2448, 2505
BmsI GCATC 9 cut(s) 169, 550, 741, 1987, 2174, 3010, 3270, 3298, 3497
BmtI GCTAGC 1 cut(s) 1002
BoxI GACNNNNGTC 2 cut(s) 37, 1499
BpiI GAAGAC 1 cut(s) 3437
BpmI CTGGAG 3 cut(s) 2193, 3269, 3305
Bpu10I CCTNAGC 1 cut(s) 537
Bpu1102I GCTNAGC 1 cut(s) 345
Bpu14I TTCGAA 1 cut(s) 851
BpuEI CTTGAG 3 cut(s) 681, 947, 1916
BpuMI CCSGG 4 cut(s) 81, 373, 3861, 3862
Bsa29I ATCGAT 2 cut(s) 749, 975
BsaAI YACGTR 1 cut(s) 1055
BsaBI GATNNNNATC 2 cut(s) 2790, 3606
BsaHI GRCGYC 2 cut(s) 1039, 1312
BsaI GGTCTC 1 cut(s) 2001
BsaWI WCCGGW 1 cut(s) 1491
Bsc4I CCNNNNNNNGG 9 cut(s) 73, 287, 863, 1784, 1993, 2678, 3433, 3937, 3970
Bse1I ACTGG 6 cut(s) 508, 763, 1886, 2176, 2427, 2650
Bse21I CCTNAGG 2 cut(s) 273, 3624
Bse3DI GCAATG 2 cut(s) 159, 3718
Bse8I GATNNNNATC 2 cut(s) 2790, 3606
BseAI TCCGGA 1 cut(s) 1491
BseBI CCWGG 7 cut(s) 858, 882, 1201, 1420, 2355, 2508, 3135
BseCI ATCGAT 2 cut(s) 749, 975
BseJI GATNNNNATC 2 cut(s) 2790, 3606
BseLI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 1784, 1993, 2678, 3433, 3937, 3970
BseMI GCAATG 2 cut(s) 159, 3718
BseNI ACTGG 6 cut(s) 508, 763, 1886, 2176, 2427, 2650
BseRI GAGGAG 8 cut(s) 270, 1043, 1676, 2327, 2672, 3019, 3660, 3842
BseYI CCCAGC 3 cut(s) 47, 385, 2537
BsgI GTGCAG 4 cut(s) 143, 252, 1557, 4031
Bsh1236I CGCG 3 cut(s) 142, 1110, 1242
BshFI GGCC 6 cut(s) 66, 109, 1465, 3077, 3794, 3930
BshNI GGYRCC 1 cut(s) 674
BshVI ATCGAT 2 cut(s) 749, 975
BsiHKAI GWGCWC 3 cut(s) 266, 2097, 3444
BsiHKCI CYCGRG 2 cut(s) 2498, 3860
BsiSI CCGG 4 cut(s) 80, 372, 1492, 3861
BslFI GGGAC 6 cut(s) 90, 240, 497, 1106, 1949, 2096
BslI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 1784, 1993, 2678, 3433, 3937, 3970
BsmAI GTCTC 7 cut(s) 922, 957, 1231, 1988, 2001, 2068, 2291
BsmFI GGGAC 6 cut(s) 90, 240, 497, 1106, 1949, 2096
BsmI GAATGC 5 cut(s) 145, 1657, 3406, 3724, 4053
BsnI GGCC 6 cut(s) 66, 109, 1465, 3077, 3794, 3930
Bso31I GGTCTC 1 cut(s) 2001
BsoBI CYCGRG 2 cut(s) 2498, 3860
Bsp119I TTCGAA 1 cut(s) 851
Bsp1286I GDGCHC 5 cut(s) 266, 912, 2097, 2873, 3444
Bsp13I TCCGGA 1 cut(s) 1491
Bsp1720I GCTNAGC 1 cut(s) 345
Bsp19I CCATGG 2 cut(s) 132, 1769
BspANI GGCC 6 cut(s) 66, 109, 1465, 3077, 3794, 3930
BspDI ATCGAT 2 cut(s) 749, 975
BspEI TCCGGA 1 cut(s) 1491
BspFNI CGCG 3 cut(s) 142, 1110, 1242
BspHI TCATGA 2 cut(s) 1684, 3673
BspLI GGNNCC 8 cut(s) 78, 279, 423, 676, 911, 1094, 2448, 2505
BspMAI CTGCAG 3 cut(s) 208, 1869, 3897
BspMI ACCTGC 2 cut(s) 790, 1591
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 8 cut(s) 728, 980, 1242, 1787, 2525, 3602, 3614, 3626
BspT104I TTCGAA 1 cut(s) 851
BspT107I GGYRCC 1 cut(s) 674
BspTNI GGTCTC 1 cut(s) 2001
BsrBI CCGCTC 2 cut(s) 1153, 1746
BsrDI GCAATG 2 cut(s) 159, 3718
BsrI ACTGG 6 cut(s) 508, 763, 1886, 2176, 2427, 2650
BssNAI GTATAC 1 cut(s) 6
BssNI GRCGYC 2 cut(s) 1039, 1312
BssT1I CCWWGG 5 cut(s) 132, 1466, 1769, 2442, 3540
Bst1107I GTATAC 1 cut(s) 6
Bst2UI CCWGG 7 cut(s) 858, 882, 1201, 1420, 2355, 2508, 3135
Bst4CI ACNGT 9 cut(s) 39, 231, 408, 597, 731, 1097, 1370, 1954, 2713
Bst6I CTCTTC 1 cut(s) 1524
BstACI GRCGYC 2 cut(s) 1039, 1312
BstAPI GCANNNNNTGC 2 cut(s) 212, 674
BstBAI YACGTR 1 cut(s) 1055
BstBI TTCGAA 1 cut(s) 851
BstDSI CCRYGG 3 cut(s) 132, 809, 1769
BstFNI CGCG 3 cut(s) 142, 1110, 1242
BstH2I RGCGCY 1 cut(s) 3427
BstHHI GCGC 3 cut(s) 142, 1244, 3426
BstMAI GTCTC 7 cut(s) 922, 957, 1231, 1988, 2001, 2068, 2291
BstMWI GCNNNNNNNGC 9 cut(s) 212, 275, 355, 586, 650, 674, 2292, 2301, 2594
BstNI CCWGG 7 cut(s) 858, 882, 1201, 1420, 2355, 2508, 3135
BstNSI RCATGY 1 cut(s) 3590
BstPAI GACNNNNGTC 2 cut(s) 37, 1499
BstSFI CTRYAG 3 cut(s) 204, 1865, 3893
BstUI CGCG 3 cut(s) 142, 1110, 1242
BstV2I GAAGAC 1 cut(s) 3437
BstX2I RGATCY 4 cut(s) 1268, 3607, 3619, 3631
BstYI RGATCY 4 cut(s) 1268, 3607, 3619, 3631
BstZ17I GTATAC 1 cut(s) 6
Bsu15I ATCGAT 2 cut(s) 749, 975
Bsu36I CCTNAGG 2 cut(s) 273, 3624
BsuRI GGCC 6 cut(s) 66, 109, 1465, 3077, 3794, 3930
BsuTUI ATCGAT 2 cut(s) 749, 975
BtgI CCRYGG 3 cut(s) 132, 809, 1769
BtrI CACGTC 1 cut(s) 3772
BtsI GCAGTG 2 cut(s) 264, 2683
BtsIMutI CAGTG 5 cut(s) 264, 2169, 2434, 2475, 2683
BveI ACCTGC 2 cut(s) 790, 1591
CaiI CAGNNNCTG 3 cut(s) 212, 601, 3328
CciI TCATGA 2 cut(s) 1684, 3673
CfoI GCGC 3 cut(s) 142, 1244, 3426
Cfr9I CCCGGG 1 cut(s) 3860
ClaI ATCGAT 2 cut(s) 749, 975
CseI GACGC 4 cut(s) 1028, 1236, 1301, 2039
Csp6I GTAC 5 cut(s) 190, 2229, 2436, 2826, 2885
CviQI GTAC 5 cut(s) 190, 2229, 2436, 2826, 2885
DriI GACNNNNNGTC 1 cut(s) 311
EaeI YGGCCR 3 cut(s) 64, 1463, 3928
Eam1104I CTCTTC 1 cut(s) 1524
Eam1105I GACNNNNNGTC 1 cut(s) 311
EarI CTCTTC 1 cut(s) 1524
Ecl136II GAGCTC 1 cut(s) 3442
Eco130I CCWWGG 5 cut(s) 132, 1466, 1769, 2442, 3540
Eco24I GRGCYC 3 cut(s) 912, 2873, 3444
Eco31I GGTCTC 1 cut(s) 2001
Eco32I GATATC 2 cut(s) 1415, 3502
Eco47I GGWCC 8 cut(s) 77, 305, 422, 533, 1093, 1741, 1766, 2681
Eco53kI GAGCTC 1 cut(s) 3442
Eco57I CTGAAG 7 cut(s) 1596, 2256, 2499, 3135, 3449, 3657, 3801
Eco81I CCTNAGG 2 cut(s) 273, 3624
Eco88I CYCGRG 2 cut(s) 2498, 3860
EcoICRI GAGCTC 1 cut(s) 3442
EcoO109I RGGNCCY 2 cut(s) 107, 422
EcoRI GAATTC 1 cut(s) 1439
EcoRII CCWGG 7 cut(s) 856, 880, 1199, 1418, 2353, 2506, 3133
EcoRV GATATC 2 cut(s) 1415, 3502
EcoT14I CCWWGG 5 cut(s) 132, 1466, 1769, 2442, 3540
EcoT22I ATGCAT 1 cut(s) 2002
EcoT38I GRGCYC 3 cut(s) 912, 2873, 3444
ErhI CCWWGG 5 cut(s) 132, 1466, 1769, 2442, 3540
FaqI GGGAC 6 cut(s) 90, 240, 497, 1106, 1949, 2096
FauNDI CATATG 3 cut(s) 43, 61, 769
FbaI TGATCA 1 cut(s) 2791
FblI GTMKAC 1 cut(s) 5
FriOI GRGCYC 3 cut(s) 912, 2873, 3444
FspBI CTAG 6 cut(s) 681, 999, 1230, 3072, 3087, 4041
GlaI GCGC 3 cut(s) 141, 1243, 3425
GsaI CCCAGC 3 cut(s) 51, 389, 2541
GsuI CTGGAG 3 cut(s) 2193, 3269, 3305
HaeII RGCGCY 1 cut(s) 3427
HaeIII GGCC 6 cut(s) 66, 109, 1465, 3077, 3794, 3930
HapII CCGG 4 cut(s) 80, 372, 1492, 3861
HgaI GACGC 4 cut(s) 1028, 1236, 1301, 2039
HhaI GCGC 3 cut(s) 142, 1244, 3426
Hin1I GRCGYC 2 cut(s) 1039, 1312
Hin6I GCGC 3 cut(s) 140, 1242, 3424
HinP1I GCGC 3 cut(s) 140, 1242, 3424
HincII GTYRAC 2 cut(s) 3559, 3880
HindII GTYRAC 2 cut(s) 3559, 3880
HpaII CCGG 4 cut(s) 80, 372, 1492, 3861
Hpy166II GTNNAC 8 cut(s) 6, 1052, 1100, 1106, 1360, 2828, 3559, 3880
Hpy8I GTNNAC 8 cut(s) 6, 1052, 1100, 1106, 1360, 2828, 3559, 3880
Hpy99I CGWCG 3 cut(s) 1044, 1242, 1281
HpyCH4III ACNGT 9 cut(s) 39, 231, 408, 597, 731, 1097, 1370, 1954, 2713
HpyCH4IV ACGT 5 cut(s) 8, 1054, 1102, 3361, 3771
HpyF10VI GCNNNNNNNGC 9 cut(s) 212, 275, 355, 586, 650, 674, 2292, 2301, 2594
HpySE526I ACGT 5 cut(s) 8, 1054, 1102, 3361, 3771
Hsp92I GRCGYC 2 cut(s) 1039, 1312
HspAI GCGC 3 cut(s) 140, 1242, 3424
Kpn2I TCCGGA 1 cut(s) 1491
Ksp22I TGATCA 1 cut(s) 2791
LweI GCATC 9 cut(s) 169, 550, 741, 1987, 2174, 3010, 3270, 3298, 3497
MaeI CTAG 6 cut(s) 681, 999, 1230, 3072, 3087, 4041
MaeII ACGT 5 cut(s) 8, 1054, 1102, 3361, 3771
MaeIII GTNAC 4 cut(s) 494, 2972, 2989, 3343
MbiI CCGCTC 2 cut(s) 1153, 1746
MfeI CAATTG 2 cut(s) 1191, 1758
MflI RGATCY 4 cut(s) 1268, 3607, 3619, 3631
MhlI GDGCHC 5 cut(s) 266, 912, 2097, 2873, 3444
MlsI TGGCCA 2 cut(s) 66, 1465
MluNI TGGCCA 2 cut(s) 66, 1465
MlyI GAGTC 7 cut(s) 876, 1233, 1489, 2168, 3077, 3161, 3671
MmeI TCCRAC 3 cut(s) 82, 458, 2788
Mox20I TGGCCA 2 cut(s) 66, 1465
Mph1103I ATGCAT 1 cut(s) 2002
MroI TCCGGA 1 cut(s) 1491
MscI TGGCCA 2 cut(s) 66, 1465
MslI CAYNNNNRTG 3 cut(s) 2624, 3567, 3993
Msp20I TGGCCA 2 cut(s) 66, 1465
MspA1I CMGCKG 6 cut(s) 209, 254, 900, 1541, 2286, 2687
MspI CCGG 4 cut(s) 80, 372, 1492, 3861
MunI CAATTG 2 cut(s) 1191, 1758
Mva1269I GAATGC 5 cut(s) 145, 1657, 3406, 3724, 4053
MvaI CCWGG 7 cut(s) 858, 882, 1201, 1420, 2355, 2508, 3135
MvnI CGCG 3 cut(s) 142, 1110, 1242
MwoI GCNNNNNNNGC 9 cut(s) 212, 275, 355, 586, 650, 674, 2292, 2301, 2594
NciI CCSGG 4 cut(s) 81, 373, 3861, 3862
NcoI CCATGG 2 cut(s) 132, 1769
NdeI CATATG 3 cut(s) 43, 61, 769
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 8 cut(s) 78, 279, 423, 676, 911, 1094, 2448, 2505
NmuCI GTSAC 3 cut(s) 494, 2972, 3343
NsiI ATGCAT 1 cut(s) 2002
NspI RCATGY 1 cut(s) 3590
NspV TTCGAA 1 cut(s) 851
OliI CACNNNNGTG 1 cut(s) 2624
PaeI GCATGC 1 cut(s) 3590
PagI TCATGA 2 cut(s) 1684, 3673
PctI GAATGC 5 cut(s) 145, 1657, 3406, 3724, 4053
PflMI CCANNNNNTGG 3 cut(s) 73, 2678, 3970
PleI GAGTC 7 cut(s) 875, 1232, 1489, 2167, 3076, 3161, 3671
PpsI GAGTC 7 cut(s) 875, 1232, 1489, 2167, 3076, 3161, 3671
Ppu21I YACGTR 1 cut(s) 1055
PpuMI RGGWCCY 1 cut(s) 422
PshAI GACNNNNGTC 2 cut(s) 37, 1499
PshBI ATTAAT 1 cut(s) 4022
Psp124BI GAGCTC 1 cut(s) 3444
Psp5II RGGWCCY 1 cut(s) 422
Psp6I CCWGG 7 cut(s) 856, 880, 1199, 1418, 2353, 2506, 3133
PspFI CCCAGC 3 cut(s) 47, 385, 2537
PspGI CCWGG 7 cut(s) 856, 880, 1199, 1418, 2353, 2506, 3133
PspN4I GGNNCC 8 cut(s) 78, 279, 423, 676, 911, 1094, 2448, 2505
PspPPI RGGWCCY 1 cut(s) 422
PstI CTGCAG 3 cut(s) 208, 1869, 3897
PstNI CAGNNNCTG 3 cut(s) 212, 601, 3328
PsuI RGATCY 4 cut(s) 1268, 3607, 3619, 3631
PvuII CAGCTG 4 cut(s) 209, 254, 1541, 2687
RsaI GTAC 5 cut(s) 191, 2230, 2437, 2827, 2886
RsaNI GTAC 5 cut(s) 190, 2229, 2436, 2826, 2885
RseI CAYNNNNRTG 3 cut(s) 2624, 3567, 3993
SacI GAGCTC 1 cut(s) 3444
SchI GAGTC 7 cut(s) 876, 1233, 1489, 2168, 3077, 3161, 3671
SduI GDGCHC 5 cut(s) 266, 912, 2097, 2873, 3444
SfaNI GCATC 9 cut(s) 169, 550, 741, 1987, 2174, 3010, 3270, 3298, 3497
SfcI CTRYAG 3 cut(s) 204, 1865, 3893
SfuI TTCGAA 1 cut(s) 851
SinI GGWCC 8 cut(s) 77, 305, 422, 533, 1093, 1741, 1766, 2681
SmaI CCCGGG 1 cut(s) 3862
SmiMI CAYNNNNRTG 3 cut(s) 2624, 3567, 3993
SmlI CTYRAG 3 cut(s) 696, 926, 1895
SmoI CTYRAG 3 cut(s) 696, 926, 1895
SphI GCATGC 1 cut(s) 3590
SspI AATATT 4 cut(s) 795, 1569, 1606, 3315
SspMI CTAG 6 cut(s) 681, 999, 1230, 3072, 3087, 4041
SstI GAGCTC 1 cut(s) 3444
StyI CCWWGG 5 cut(s) 132, 1466, 1769, 2442, 3540
TaaI ACNGT 9 cut(s) 39, 231, 408, 597, 731, 1097, 1370, 1954, 2713
TaiI ACGT 5 cut(s) 11, 1057, 1105, 3364, 3774
TaqI TCGA 8 cut(s) 508, 749, 851, 975, 1042, 1400, 3127, 3693
TaqII GACCGA 2 cut(s) 301, 521
TatI WGTACW 3 cut(s) 2228, 2435, 2825
TauI GCSGC 2 cut(s) 145, 1156
TscAI CASTG 5 cut(s) 271, 2176, 2434, 2482, 2683
TseFI GTSAC 3 cut(s) 494, 2972, 3343
Tsp45I GTSAC 3 cut(s) 494, 2972, 3343
TspGWI ACGGA 5 cut(s) 826, 1351, 1785, 3449, 3803
TspMI CCCGGG 1 cut(s) 3860
TspRI CASTG 5 cut(s) 271, 2176, 2434, 2482, 2683
Van91I CCANNNNNTGG 3 cut(s) 73, 2678, 3970
VpaK11BI GGWCC 8 cut(s) 77, 305, 422, 533, 1093, 1741, 1766, 2681
VspI ATTAAT 1 cut(s) 4022
XapI RAATTY 6 cut(s) 70, 94, 362, 1013, 1439, 2343
XceI RCATGY 1 cut(s) 3590
XmaI CCCGGG 1 cut(s) 3860
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 6 cut(s) 681, 999, 1230, 3072, 3087, 4041
Zsp2I ATGCAT 1 cut(s) 2002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.