Rroxscaffold_5G00380350

Cell division cycle and apoptosis regulator protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Reverse (-)
60544278 .. 60552410
8133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00380350.1

Sequence Viewer

Length: 4158 bp
ATGTATACGTCCAGAGGGAACAATGCGTATGGACAGCAGTCATATGCTGGGCAATCTGCATATGGCCAAAATTTGGGACCGGGATATCCTGCAAATTCTGTTGGAGGGCCCGATGGGAATGCGCAGCTTCCCATGGTTTCGCGGCATTCAGCAATGTTAGGGGGTTCGGAGGAAGTAGATGCCAATGCGTACAGACCACTTCCTGCAGCTGCAGCTCATTATGGGGGACAGTATAGCTCTATCTACGGTTCAGCTGCTTTGAGCACTGCACCTCAGGCTCCACCCATTGGTGCCAAAGGTTCAGGACCATCGGTTTTGGAAAGTCGTGGCGGCTATGCTTCAGCTAAACAAGATTCGCCAAAATTTTCATCTGGGGACTATATCCCAGCTTCAAGTCATACACAACTGTATGGTGAAAAGGGTCCTGATTATCCAGCAATTGACAGAAGGCAGTTTGGTCGTCAGAGTGCTTACATGGGGAGGGACTTGCAAAGTGAACCAACCAGTCGATTTGCTGATTCTGTTGGTTTCGGTCCTCAGCATCAGGCTGAGATTTATGATCGCATTGATAAGGCGGTGCTGCTTCGGCAAGAACAGTTGCTGAAAGCTCACTCTCTGCAATCTGCTTCTCTTGAAGGGAGTGCAAGACAAGCTGATTATCTTGCAGCAAGGGGTGCCTCTAGTCGTCATCCCACTCAAGAACTTACTTCTTTTGGAGGAAGAATGGATGGTGATCCTCGCAGTTTATCGATGCTTAGTGGTTCTTCATATGGGGAACAACCTGCTCCATCAATATTAGGGGCAGCTCCACGGAGAAATGCAGATGACCTCTTATATTCACAAAATTCTTCAAATCCTGGCTATGGAGTCAGCCTTCCTCCTGGGAGGGACTATGGCAGCGGAAAAGGGCTCCATGTCCCATCACTCGAGTCAGATTACCCAATTAGCTTGTCTCATGGTGGTCATCCAAGGATCGATGAACGCAAGGATGACAGGGCTAGCTATCTTCAAGAATTTGAACTAAGGGAGGAGGCACGGCGTCGAGATCGTTTACGTGAGAGAGAGAGGGATAGAGAAAGGGAGAAGGAATGGGAGCGCGAGCGTGAACGCGAGCGAGAACGAGAAAGAGAGCGTGAAAGAGGCATTTTGGAGCGGCGGTTGAAGGAAAGAGAGCGAGATCGCAAGCGTGCACTTGACACCAGGCGGGAACGAACTCCACCAAGAGTCTCTAGGGATCGTCGCGGTTCGTCTTTGGTGAAGGAGGGGAGATCTTTACGACGGGATTCCCCACATCATGAAGCTGCGCATAGGCGTCATTCACCCGTTAAAGATAAGAGGAGAGAATATGTCTGCAAGGCTTACTCATCCAGCCTGGTAGATGTAGAAAGGGATTATCTTTCAATGGATAAACGATATCCCAGGCTTTTTATACCCTCAGAATTCTGCAAGGCTGTGGTGAACTGGCCAAGGGAGAACCTTCAACTTTCTATCCGGACTCCTGTCAGTTTTGAGCATGATTTTGTGGAAGAAGAGGGTGCAGCTGTAATGAAAGAGCCAACAACTAAAATATTTGCTGAAGAACCTGCAAAATCAGGAGGTGGGAATATTGTGTGGAATGTGAAGGATCCTGATATTTTCAGTTTTCTTTCTGTTAATACAGAGAATCATGACTATCCTACTTTTCTATCCCTCTTTCAGATTATCTTGATGAGTGGGATAAGCAAGAATGCTTTGGAGGAGCTGTCATCTGAAAGAAGTTCTGATGATCGCATACCCCATATCTGCAATATCATTAGGTTTGCCATTCTTAAAAAGGACCGCTCATTCATGACAATTGGTGGTCCATGGAATTCCACTGATGGTGGTGATCCATCAGTTGATGATAGCTCTTTAATTCAAACTGCAATAAGATATGGAAAGCATGTTGCGAAACTTGATCTGCAGAACTGCAAGAACTGGAATCGTTTTCTTGAGATACACTATGATAGAATTGGGAAAGATGGATTCTTTAGCCATAAAGAGATTACTGTCATATTTGTCCCAGATTTGTCTGAGTGTCTCCCTTCATTGGATGCATGGCGAGACCAATGGCTTGCTCACAAGAAAGCTGTTGCAGAAAGAGAGCGTCAGCTTTCTCTGAGAAAAGAGAGATCGAGGGAAAAGGAAATGCTGAAAGAAGCAAAAGAAGTTAAGAACAAGGGACAAGATGGTAGTAATTCGAATGGGAGTGCATCTGAAGGAAAGGGTGATATGAATGATAAGAAGATTGAGAAAAAAGATGACAGTGGTGGTGAGAAAAGCAGTGAGACACGGAGCAATGAGGAAAATAAGGAACAGGTAGAAGCTGCTGAAATTCAGACACCTGGAAGTGCTAAGTCTGGGAAGAAGAAGATTGTAAGAAGGGTTGTCAAACAGAAGGTTGTAGGTAAGTTAGCCAGTGATAGTACAACCAAGCAACCTGACAATGTGGGTGAGAAGAGTAATACTGAAGGGGCAAAAGAAAATCCAGAGACTCCAGGTGAAGAGGAGTCTTCAGCTGATCCTACTGCGACCAAAACCTTTAAGAGAAAAAGACTTGTTAAAAAGGTTTTAGTGGTGAAGGCTGCTCAGAATGAAGATAATATAGACACAAAGGTGAAAGCTGGGCAGGAAACTGGCTGCGCTGAGGAGAAAGCTGAACCAAGCAGTGGTCCAGCCATGCAAGATACTAATGTGAAAACTGTAGTCAAGAAGAAAATAATTAAGAAGGTTGCTAAAAGAAAGGTTGCTGATGTGGAACAGAGCAAAGCGGTTGATGACGATGAGAAAAATGTTGTCGGAGATGAAACAGAAAGTACACAGAAAAAAACAGCAGGTGTGGAAAAGCCAGCACGTGAACTTACAGAATCAGGAAATAAAGTGGTTTCTAAAACAAAGGGGTCAAAAACAGAAGTATCTGAAAAGCAAAATGATGTGGTCAGTTCAATTAAACCAGAGACAAAAGATGTTAAGGAGGATAAGAAAGATGAGAAGCGAACTGGTGACAAAAGTGGCTCTGTTACTAAAGCAGAGAGGAGCAAATCAAAAGATGCTGAAAAATCCAAAGATGAGAAAGACAAAAAGGAGAGAGATGGAAAAGCTGAGTCTAGGGCCAAATCAAATAGAGAAGTGAAAGAAACGAGAAAGCCTGAAGAACCACCTCGACACCCTGGATTAATTCTACAAACAAAATTCAGCAAGGAATCCAAGCTGCGTTCATCATCACTTTCACTTGATTTACTATTGGACTATACTGACAAGGATATCGAAGAATCAACATTTGAGCTTTCAGTATTTGCTGAAACATTCTATGAGATGCTCCAGCATCAAATGGGATGTCGTCTTCTAACATTTCTCCAGAAACTGCGAATAAAATTTGTGACAAAAAGAAACCAACGCAAGAGGCAACGAGAAGAAGAAAATGTTGAGAAAGAAAATGATGAAAACTCATCAGCAAAGCGCCCGAAGACGGATGAGCTCCCGGTGAAAGATCAGCCTGCTAAATCATCTGAAACTTTGAGTGCTAAATCATCTGAAAATTTGAGTGCAACTCAGCCTGATGTCGTGAAACAGGAGGAAGAAAAAGCTATAACTATCTCCAAGGAGAGTAGTTCTGTTGATCATGTTGATGAGGTGAAAATGGAGCAGGTAACAGATGATGAGGAAGATCCAGAGGAAGATCCTGAAGAATATGAACCAATGGAGGATGGAAGTCCTCAACATGACTCCAATGAAAATATTGAGGAAGAAGGGAAAAGCAATGTGAATGCTGTGCCTGGAAATGAGAAGGATGAAGTCAATGTCAAGGAGGAAAAGGACGTGAAGGCCGAAGAAACAAAGGCCAAACCAGAAGCAGATGTATGTGAGAAAAAAGAGGAGAAAGTTGATAAAGACAAGAAAGAAACTCCCCGGGCAAAGGAGGTTGTTGACAAGGAACTACTGCAGGCTTTTAGGTTCTTTGACAGGAATCAAGTCGGCCACATTAGGGTTGAAGATATGAGATTGATAATCCATAACTTGGGAAAGTTCCTCTCACACAGGGATGTCAAGGAACTCGTGCAGAGTGCATTAATAGAGAGCAACACAGCTAGGGATGACCGCATTCTTTACAAAAAGCTGGTGCGGATGACTGACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1385

Amino Acids

155.8

Weight (kDa)

6.69

Isoelectric Point (pI)

52.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBC1 PF14443 593 - 710 5.2e-43 DBC1
LAIKA PF19256 1059 - 1123 3.4e-19 LAIKA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2843
Acc16I TGCGCA 2 cut(s) 123, 1305
Acc36I ACCTGC 4 cut(s) 790, 1591, 2843, 3655
AccB1I GGYRCC 2 cut(s) 290, 674
AccB7I CCANNNNNTGG 4 cut(s) 73, 287, 2687, 4036
AccBSI CCGCTC 2 cut(s) 1153, 1821
AccI GTMKAC 1 cut(s) 5
AccII CGCG 4 cut(s) 142, 1098, 1110, 1242
AccIII TCCGGA 1 cut(s) 1491
AclWI GGATC 9 cut(s) 728, 980, 1242, 1619, 1632, 1862, 2534, 3680, 3692
AcoI YGGCCR 3 cut(s) 64, 1463, 3994
AcuI CTGAAG 7 cut(s) 324, 1596, 2256, 2508, 2517, 3189, 3723
AcvI CACGTG 1 cut(s) 2873
AcyI GRCGYC 2 cut(s) 1039, 1312
AfaI GTAC 3 cut(s) 191, 2446, 2836
AfiI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 2068, 2687, 3487, 3934, 4003, 4036
AjiI CACGTC 1 cut(s) 3838
AjnI CCWGG 9 cut(s) 856, 880, 1199, 1371, 1418, 2362, 2515, 3187, 3793
AleI CACNNNNGTG 1 cut(s) 2633
Alw21I GWGCWC 3 cut(s) 266, 1192, 3498
Alw26I GTCTC 7 cut(s) 957, 1231, 2063, 2076, 2300, 2504, 2969
Alw44I GTGCAC 1 cut(s) 1188
AlwI GGATC 9 cut(s) 728, 980, 1242, 1619, 1632, 1862, 2534, 3680, 3692
AlwNI CAGNNNCTG 2 cut(s) 601, 3382
Ama87I CYCGRG 2 cut(s) 926, 3927
Aor13HI TCCGGA 1 cut(s) 1491
AoxI GGCC 7 cut(s) 64, 107, 1463, 3129, 3843, 3858, 3994
ApaI GGGCCC 1 cut(s) 111
ApaLI GTGCAC 1 cut(s) 1188
ArsI GACNNNNNNTTYG 2 cut(s) 3340, 3372
AseI ATTAAT 2 cut(s) 3194, 4088
AspLEI GCGC 5 cut(s) 124, 1098, 1306, 2663, 3480
AsuC2I CCSGG 4 cut(s) 81, 3500, 3928, 3929
AsuII TTCGAA 1 cut(s) 2219
AsuNHI GCTAGC 1 cut(s) 998
AvaI CYCGRG 2 cut(s) 926, 3927
AvaII GGWCC 7 cut(s) 77, 305, 422, 533, 1816, 1841, 2690
AxyI CCTNAGG 1 cut(s) 273
BaeGI GKGCMC 2 cut(s) 111, 1192
BaeI ACNNNNGTAYC 4 cut(s) 2697, 2730, 2916, 2949
BalI TGGCCA 2 cut(s) 66, 1465
BamHI GGATCC 1 cut(s) 1624
BanI GGYRCC 2 cut(s) 290, 674
BanII GRGCYC 3 cut(s) 111, 912, 3498
BauI CACGAG 1 cut(s) 4073
BbrPI CACGTG 1 cut(s) 2873
BbsI GAAGAC 3 cut(s) 2523, 3353, 3491
Bbv12I GWGCWC 3 cut(s) 266, 1192, 3498
BbvCI CCTCAGC 2 cut(s) 537, 2664
BceAI ACGGC 1 cut(s) 1052
BcgI CGANNNNNNTGC 4 cut(s) 101, 135, 440, 474
BciT130I CCWGG 9 cut(s) 858, 882, 1201, 1373, 1420, 2364, 2517, 3189, 3795
BclI TGATCA 1 cut(s) 3637
BcnI CCSGG 4 cut(s) 81, 3500, 3928, 3929
BcoDI GTCTC 7 cut(s) 957, 1231, 2063, 2076, 2300, 2504, 2969
BfaI CTAG 5 cut(s) 681, 999, 1230, 3126, 4107
BfmI CTRYAG 5 cut(s) 204, 210, 1940, 2721, 3959
BfoI RGCGCY 1 cut(s) 3481
BfuAI ACCTGC 4 cut(s) 790, 1591, 2843, 3655
BglII AGATCT 1 cut(s) 1268
Bme18I GGWCC 7 cut(s) 77, 305, 422, 533, 1816, 1841, 2690
BmeT110I CYCGRG 2 cut(s) 926, 3927
BmgBI CACGTC 1 cut(s) 3838
BmiI GGNNCC 8 cut(s) 78, 109, 279, 292, 423, 676, 911, 1626
BmsI GCATC 8 cut(s) 169, 550, 741, 2062, 2240, 3058, 3324, 3352
BmtI GCTAGC 1 cut(s) 1002
BoxI GACNNNNGTC 2 cut(s) 37, 1499
BpiI GAAGAC 3 cut(s) 2523, 3353, 3491
BplI GAGNNNNNCTC 2 cut(s) 3553, 3585
BpmI CTGGAG 3 cut(s) 2499, 3323, 3359
Bpu10I CCTNAGC 2 cut(s) 537, 2664
Bpu14I TTCGAA 1 cut(s) 2219
BpuEI CTTGAG 2 cut(s) 681, 1991
BpuMI CCSGG 4 cut(s) 81, 3500, 3928, 3929
Bsa29I ATCGAT 2 cut(s) 749, 975
BsaAI YACGTR 2 cut(s) 1055, 2873
BsaBI GATNNNNATC 1 cut(s) 732
BsaHI GRCGYC 2 cut(s) 1039, 1312
BsaI GGTCTC 1 cut(s) 2076
BsaWI WCCGGW 1 cut(s) 1491
BsaXI ACNNNNNCTCC 4 cut(s) 1142, 1172, 1727, 1757
Bsc4I CCNNNNNNNGG 9 cut(s) 73, 287, 863, 2068, 2687, 3487, 3934, 4003, 4036
Bse1I ACTGG 6 cut(s) 504, 1466, 1961, 2436, 2659, 3022
Bse21I CCTNAGG 1 cut(s) 273
Bse3DI GCAATG 3 cut(s) 159, 2323, 3784
Bse8I GATNNNNATC 1 cut(s) 732
BseAI TCCGGA 1 cut(s) 1491
BseBI CCWGG 9 cut(s) 858, 882, 1201, 1373, 1420, 2364, 2517, 3189, 3795
BseCI ATCGAT 2 cut(s) 749, 975
BseJI GATNNNNATC 1 cut(s) 732
BseLI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 2068, 2687, 3487, 3934, 4003, 4036
BseMI GCAATG 3 cut(s) 159, 2323, 3784
BseNI ACTGG 6 cut(s) 504, 1466, 1961, 2436, 2659, 3022
BseRI GAGGAG 7 cut(s) 1043, 1351, 1751, 2540, 2681, 3067, 3908
BseSI GKGCMC 2 cut(s) 111, 1192
BseYI CCCAGC 3 cut(s) 47, 385, 2642
BsgI GTGCAG 3 cut(s) 252, 1557, 4097
Bsh1236I CGCG 4 cut(s) 142, 1098, 1110, 1242
BshFI GGCC 7 cut(s) 66, 109, 1465, 3131, 3845, 3860, 3996
BshNI GGYRCC 2 cut(s) 290, 674
BshVI ATCGAT 2 cut(s) 749, 975
BsiHKAI GWGCWC 3 cut(s) 266, 1192, 3498
BsiHKCI CYCGRG 2 cut(s) 926, 3927
BsiSI CCGG 4 cut(s) 80, 1492, 3500, 3928
BslFI GGGAC 8 cut(s) 90, 240, 389, 497, 902, 902, 2024, 2214
BslI CCNNNNNNNGG 9 cut(s) 73, 287, 863, 2068, 2687, 3487, 3934, 4003, 4036
BsmAI GTCTC 7 cut(s) 957, 1231, 2063, 2076, 2300, 2504, 2969
BsmFI GGGAC 8 cut(s) 90, 240, 389, 497, 902, 902, 2024, 2214
BsmI GAATGC 5 cut(s) 124, 145, 1732, 3790, 4119
BsnI GGCC 7 cut(s) 66, 109, 1465, 3131, 3845, 3860, 3996
Bso31I GGTCTC 1 cut(s) 2076
BsoBI CYCGRG 2 cut(s) 926, 3927
Bsp119I TTCGAA 1 cut(s) 2219
Bsp120I GGGCCC 1 cut(s) 107
Bsp1286I GDGCHC 5 cut(s) 111, 266, 912, 1192, 3498
Bsp13I TCCGGA 1 cut(s) 1491
Bsp19I CCATGG 2 cut(s) 132, 1844
BspANI GGCC 7 cut(s) 66, 109, 1465, 3131, 3845, 3860, 3996
BspDI ATCGAT 2 cut(s) 749, 975
BspEI TCCGGA 1 cut(s) 1491
BspFNI CGCG 4 cut(s) 142, 1098, 1110, 1242
BspHI TCATGA 3 cut(s) 1294, 1666, 1827
BspLI GGNNCC 8 cut(s) 78, 109, 279, 292, 423, 676, 911, 1626
BspMAI CTGCAG 4 cut(s) 208, 214, 1944, 3963
BspMI ACCTGC 4 cut(s) 790, 1591, 2843, 3655
BspOI GCTAGC 1 cut(s) 1002
BspPI GGATC 9 cut(s) 728, 980, 1242, 1619, 1632, 1862, 2534, 3680, 3692
BspT104I TTCGAA 1 cut(s) 2219
BspT107I GGYRCC 2 cut(s) 290, 674
BspTNI GGTCTC 1 cut(s) 2076
BsrBI CCGCTC 2 cut(s) 1153, 1821
BsrDI GCAATG 3 cut(s) 159, 2323, 3784
BsrI ACTGG 6 cut(s) 504, 1466, 1961, 2436, 2659, 3022
BssNAI GTATAC 1 cut(s) 6
BssNI GRCGYC 2 cut(s) 1039, 1312
BssSI CACGAG 1 cut(s) 4073
BssT1I CCWWGG 5 cut(s) 132, 968, 1466, 1844, 3618
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 4073
Bst2UI CCWGG 9 cut(s) 858, 882, 1201, 1373, 1420, 2364, 2517, 3189, 3795
Bst4CI ACNGT 7 cut(s) 231, 248, 408, 597, 2029, 2285, 2722
Bst6I CTCTTC 3 cut(s) 1524, 2471, 2517
BstACI GRCGYC 2 cut(s) 1039, 1312
BstAPI GCANNNNNTGC 1 cut(s) 674
BstBAI YACGTR 2 cut(s) 1055, 2873
BstBI TTCGAA 1 cut(s) 2219
BstC8I GCNNGC 9 cut(s) 1000, 1100, 1112, 1184, 1188, 2094, 2868, 3516, 3963
BstDSI CCRYGG 3 cut(s) 132, 809, 1844
BstFNI CGCG 4 cut(s) 142, 1098, 1110, 1242
BstH2I RGCGCY 1 cut(s) 3481
BstHHI GCGC 5 cut(s) 124, 1098, 1306, 2663, 3480
BstMAI GTCTC 7 cut(s) 957, 1231, 2063, 2076, 2300, 2504, 2969
BstMWI GCNNNNNNNGC 5 cut(s) 212, 275, 586, 650, 674
BstNI CCWGG 9 cut(s) 858, 882, 1201, 1373, 1420, 2364, 2517, 3189, 3795
BstNSI RCATGY 1 cut(s) 1925
BstPAI GACNNNNGTC 2 cut(s) 37, 1499
BstSFI CTRYAG 5 cut(s) 204, 210, 1940, 2721, 3959
BstSLI GKGCMC 2 cut(s) 111, 1192
BstUI CGCG 4 cut(s) 142, 1098, 1110, 1242
BstV2I GAAGAC 3 cut(s) 2523, 3353, 3491
BstX2I RGATCY 4 cut(s) 1268, 1624, 3685, 3697
BstYI RGATCY 4 cut(s) 1268, 1624, 3685, 3697
BstZ17I GTATAC 1 cut(s) 6
Bsu15I ATCGAT 2 cut(s) 749, 975
Bsu36I CCTNAGG 1 cut(s) 273
BsuRI GGCC 7 cut(s) 66, 109, 1465, 3131, 3845, 3860, 3996
BsuTUI ATCGAT 2 cut(s) 749, 975
BtgI CCRYGG 3 cut(s) 132, 809, 1844
BtrI CACGTC 1 cut(s) 3838
BtsI GCAGTG 3 cut(s) 264, 2308, 2692
BtsIMutI CAGTG 6 cut(s) 264, 1854, 2290, 2308, 2443, 2692
BveI ACCTGC 4 cut(s) 790, 1591, 2843, 3655
Cac8I GCNNGC 9 cut(s) 1000, 1100, 1112, 1184, 1188, 2094, 2868, 3516, 3963
CaiI CAGNNNCTG 2 cut(s) 601, 3382
CciI TCATGA 3 cut(s) 1294, 1666, 1827
CfoI GCGC 5 cut(s) 124, 1098, 1306, 2663, 3480
Cfr9I CCCGGG 1 cut(s) 3927
ClaI ATCGAT 2 cut(s) 749, 975
CseI GACGC 3 cut(s) 1028, 1301, 2114
Csp6I GTAC 3 cut(s) 190, 2445, 2835
CviQI GTAC 3 cut(s) 190, 2445, 2835
EaeI YGGCCR 3 cut(s) 64, 1463, 3994
Eam1104I CTCTTC 3 cut(s) 1524, 2471, 2517
EarI CTCTTC 3 cut(s) 1524, 2471, 2517
Ecl136II GAGCTC 1 cut(s) 3496
Eco130I CCWWGG 5 cut(s) 132, 968, 1466, 1844, 3618
Eco24I GRGCYC 3 cut(s) 111, 912, 3498
Eco31I GGTCTC 1 cut(s) 2076
Eco32I GATATC 3 cut(s) 86, 1415, 3283
Eco47I GGWCC 7 cut(s) 77, 305, 422, 533, 1816, 1841, 2690
Eco53kI GAGCTC 1 cut(s) 3496
Eco57I CTGAAG 7 cut(s) 324, 1596, 2256, 2508, 2517, 3189, 3723
Eco72I CACGTG 1 cut(s) 2873
Eco81I CCTNAGG 1 cut(s) 273
Eco88I CYCGRG 2 cut(s) 926, 3927
EcoICRI GAGCTC 1 cut(s) 3496
EcoO109I RGGNCCY 2 cut(s) 107, 422
EcoRI GAATTC 2 cut(s) 1439, 1849
EcoRII CCWGG 9 cut(s) 856, 880, 1199, 1371, 1418, 2362, 2515, 3187, 3793
EcoRV GATATC 3 cut(s) 86, 1415, 3283
EcoT14I CCWWGG 5 cut(s) 132, 968, 1466, 1844, 3618
EcoT22I ATGCAT 1 cut(s) 2077
EcoT38I GRGCYC 3 cut(s) 111, 912, 3498
ErhI CCWWGG 5 cut(s) 132, 968, 1466, 1844, 3618
FaqI GGGAC 8 cut(s) 90, 240, 389, 497, 902, 902, 2024, 2214
FauI CCCGC 1 cut(s) 1197
FauNDI CATATG 3 cut(s) 43, 61, 769
FbaI TGATCA 1 cut(s) 3637
FblI GTMKAC 1 cut(s) 5
FriOI GRGCYC 3 cut(s) 111, 912, 3498
FspBI CTAG 5 cut(s) 681, 999, 1230, 3126, 4107
FspI TGCGCA 2 cut(s) 123, 1305
GlaI GCGC 5 cut(s) 123, 1097, 1305, 2662, 3479
GsaI CCCAGC 3 cut(s) 51, 389, 2646
GsuI CTGGAG 3 cut(s) 2499, 3323, 3359
HaeII RGCGCY 1 cut(s) 3481
HaeIII GGCC 7 cut(s) 66, 109, 1465, 3131, 3845, 3860, 3996
HapII CCGG 4 cut(s) 80, 1492, 3500, 3928
HgaI GACGC 3 cut(s) 1028, 1301, 2114
HhaI GCGC 5 cut(s) 124, 1098, 1306, 2663, 3480
Hin1I GRCGYC 2 cut(s) 1039, 1312
Hin6I GCGC 5 cut(s) 122, 1096, 1304, 2661, 3478
HinP1I GCGC 5 cut(s) 122, 1096, 1304, 2661, 3478
HincII GTYRAC 1 cut(s) 3946
HindII GTYRAC 1 cut(s) 3946
HpaII CCGG 4 cut(s) 80, 1492, 3500, 3928
Hpy166II GTNNAC 9 cut(s) 6, 497, 1052, 1106, 1190, 1459, 2837, 2876, 3946
Hpy8I GTNNAC 9 cut(s) 6, 497, 1052, 1106, 1190, 1459, 2837, 2876, 3946
Hpy99I CGWCG 3 cut(s) 1044, 1242, 1281
HpyCH4III ACNGT 7 cut(s) 231, 248, 408, 597, 2029, 2285, 2722
HpyCH4IV ACGT 4 cut(s) 8, 1054, 2872, 3837
HpyF10VI GCNNNNNNNGC 5 cut(s) 212, 275, 586, 650, 674
HpySE526I ACGT 4 cut(s) 8, 1054, 2872, 3837
Hsp92I GRCGYC 2 cut(s) 1039, 1312
HspAI GCGC 5 cut(s) 122, 1096, 1304, 2661, 3478
Kpn2I TCCGGA 1 cut(s) 1491
Ksp22I TGATCA 1 cut(s) 3637
LweI GCATC 8 cut(s) 169, 550, 741, 2062, 2240, 3058, 3324, 3352
MaeI CTAG 5 cut(s) 681, 999, 1230, 3126, 4107
MaeII ACGT 4 cut(s) 8, 1054, 2872, 3837
MaeIII GTNAC 4 cut(s) 3020, 3037, 3397, 3667
MbiI CCGCTC 2 cut(s) 1153, 1821
MfeI CAATTG 2 cut(s) 438, 1833
MflI RGATCY 4 cut(s) 1268, 1624, 3685, 3697
MhlI GDGCHC 5 cut(s) 111, 266, 912, 1192, 3498
MlsI TGGCCA 2 cut(s) 66, 1465
MluNI TGGCCA 2 cut(s) 66, 1465
MlyI GAGTC 8 cut(s) 876, 938, 1233, 1489, 2506, 2537, 3131, 3737
MmeI TCCRAC 2 cut(s) 82, 2797
Mox20I TGGCCA 2 cut(s) 66, 1465
Mph1103I ATGCAT 1 cut(s) 2077
MroI TCCGGA 1 cut(s) 1491
MscI TGGCCA 2 cut(s) 66, 1465
MslI CAYNNNNRTG 3 cut(s) 2633, 3645, 4059
Msp20I TGGCCA 2 cut(s) 66, 1465
MspA1I CMGCKG 5 cut(s) 209, 254, 900, 1541, 2537
MspI CCGG 4 cut(s) 80, 1492, 3500, 3928
MunI CAATTG 2 cut(s) 438, 1833
Mva1269I GAATGC 5 cut(s) 124, 145, 1732, 3790, 4119
MvaI CCWGG 9 cut(s) 858, 882, 1201, 1373, 1420, 2364, 2517, 3189, 3795
MvnI CGCG 4 cut(s) 142, 1098, 1110, 1242
MwoI GCNNNNNNNGC 5 cut(s) 212, 275, 586, 650, 674
NciI CCSGG 4 cut(s) 81, 3500, 3928, 3929
NcoI CCATGG 2 cut(s) 132, 1844
NdeI CATATG 3 cut(s) 43, 61, 769
NheI GCTAGC 1 cut(s) 998
NlaIV GGNNCC 8 cut(s) 78, 109, 279, 292, 423, 676, 911, 1626
NmuCI GTSAC 2 cut(s) 3020, 3397
NsbI TGCGCA 2 cut(s) 123, 1305
NsiI ATGCAT 1 cut(s) 2077
NspI RCATGY 1 cut(s) 1925
NspV TTCGAA 1 cut(s) 2219
OliI CACNNNNGTG 1 cut(s) 2633
PaeR7I CTCGAG 1 cut(s) 926
PagI TCATGA 3 cut(s) 1294, 1666, 1827
PaqCI CACCTGC 1 cut(s) 2843
PcsI WCGNNNNNNNCGW 1 cut(s) 3843
PctI GAATGC 5 cut(s) 124, 145, 1732, 3790, 4119
PflMI CCANNNNNTGG 4 cut(s) 73, 287, 2687, 4036
PleI GAGTC 8 cut(s) 875, 937, 1232, 1489, 2506, 2536, 3130, 3737
PmaCI CACGTG 1 cut(s) 2873
PmlI CACGTG 1 cut(s) 2873
PpsI GAGTC 8 cut(s) 875, 937, 1232, 1489, 2506, 2536, 3130, 3737
Ppu21I YACGTR 2 cut(s) 1055, 2873
PpuMI RGGWCCY 1 cut(s) 422
PshAI GACNNNNGTC 2 cut(s) 37, 1499
PshBI ATTAAT 2 cut(s) 3194, 4088
Psp124BI GAGCTC 1 cut(s) 3498
Psp5II RGGWCCY 1 cut(s) 422
Psp6I CCWGG 9 cut(s) 856, 880, 1199, 1371, 1418, 2362, 2515, 3187, 3793
PspCI CACGTG 1 cut(s) 2873
PspFI CCCAGC 3 cut(s) 47, 385, 2642
PspGI CCWGG 9 cut(s) 856, 880, 1199, 1371, 1418, 2362, 2515, 3187, 3793
PspN4I GGNNCC 8 cut(s) 78, 109, 279, 292, 423, 676, 911, 1626
PspOMI GGGCCC 1 cut(s) 107
PspPPI RGGWCCY 1 cut(s) 422
PspXI VCTCGAGB 1 cut(s) 926
PstI CTGCAG 4 cut(s) 208, 214, 1944, 3963
PstNI CAGNNNCTG 2 cut(s) 601, 3382
PsuI RGATCY 4 cut(s) 1268, 1624, 3685, 3697
PvuII CAGCTG 4 cut(s) 209, 254, 1541, 2537
RsaI GTAC 3 cut(s) 191, 2446, 2836
RsaNI GTAC 3 cut(s) 190, 2445, 2835
RseI CAYNNNNRTG 3 cut(s) 2633, 3645, 4059
SacI GAGCTC 1 cut(s) 3498
SchI GAGTC 8 cut(s) 876, 938, 1233, 1489, 2506, 2537, 3131, 3737
SduI GDGCHC 5 cut(s) 111, 266, 912, 1192, 3498
SfaNI GCATC 8 cut(s) 169, 550, 741, 2062, 2240, 3058, 3324, 3352
SfcI CTRYAG 5 cut(s) 204, 210, 1940, 2721, 3959
Sfr274I CTCGAG 1 cut(s) 926
SfuI TTCGAA 1 cut(s) 2219
SinI GGWCC 7 cut(s) 77, 305, 422, 533, 1816, 1841, 2690
SlaI CTCGAG 1 cut(s) 926
SmaI CCCGGG 1 cut(s) 3929
SmiMI CAYNNNNRTG 3 cut(s) 2633, 3645, 4059
SmlI CTYRAG 3 cut(s) 696, 926, 1970
SmoI CTYRAG 3 cut(s) 696, 926, 1970
SspI AATATT 4 cut(s) 795, 1569, 1606, 3757
SspMI CTAG 5 cut(s) 681, 999, 1230, 3126, 4107
SstI GAGCTC 1 cut(s) 3498
StyI CCWWGG 5 cut(s) 132, 968, 1466, 1844, 3618
TaaI ACNGT 7 cut(s) 231, 248, 408, 597, 2029, 2285, 2722
TaiI ACGT 4 cut(s) 11, 1057, 2875, 3840
TaqI TCGA 9 cut(s) 508, 749, 927, 975, 1042, 2153, 2219, 3181, 3285
TaqII GACCGA 1 cut(s) 521
TatI WGTACW 2 cut(s) 2444, 2834
TauI GCSGC 3 cut(s) 145, 333, 1156
TscAI CASTG 6 cut(s) 271, 1861, 2290, 2308, 2443, 2692
TseFI GTSAC 2 cut(s) 3020, 3397
Tsp45I GTSAC 2 cut(s) 3020, 3397
TspGWI ACGGA 3 cut(s) 826, 2326, 3503
TspMI CCCGGG 1 cut(s) 3927
TspRI CASTG 6 cut(s) 271, 1861, 2290, 2308, 2443, 2692
Van91I CCANNNNNTGG 4 cut(s) 73, 287, 2687, 4036
VneI GTGCAC 1 cut(s) 1188
VpaK11BI GGWCC 7 cut(s) 77, 305, 422, 533, 1816, 1841, 2690
VspI ATTAAT 2 cut(s) 3194, 4088
XceI RCATGY 1 cut(s) 1925
XhoI CTCGAG 1 cut(s) 926
XmaI CCCGGG 1 cut(s) 3927
XmiI GTMKAC 1 cut(s) 5
XspI CTAG 5 cut(s) 681, 999, 1230, 3126, 4107
Zsp2I ATGCAT 1 cut(s) 2077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.