FvH4_5g27741

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0015369
Physical Location & Seq
Forward (+)
18963093 .. 18969320
6228 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g27741.t1

Sequence Viewer

Length: 2040 bp
ATGTCTGAAGAGGCTGGAGTAATGTTGGTGGTTTATGATGATCCCTCAGACCGACAATCTTTCTCTTTGGATGATACCAGCAGCAGTGAGGAATCACTTGATGAAACTAGGCTCTCACTGGAGACTACAAACGATGTGATTCCATATATTGGAAAAAGATTTGCTACTCATGATGCAGCTTATGAGTACTATAGTGAATTTGCAAAGCAATGTGGATTCTCAATCCGGCGACACCGTACAGAGGGGAAAGATGGGGTGGGCAAGGGACTTACAAGACGCTACTTTGTCTGCCACCGTGCTGGAAATACTCCGAGTAAAACATCCAATGAAAGCAAGCCTCGAAGAAATCGAAAGTCCTCCCGATGTGGATGTCAAGCATACATGCGGATAAGCAAGACAACAGAATTAGGATCATTGGAATGGCGTGTGACTGGTTTCACGAACCACCATAATCATGAACTCTTGGAGCCAAACCAAGTTCGTTTTCTTCCTGCATACCGAACTATAACCGAATCTGATAAGAGCCGGATCCTTATGTTTGCCAAGACAGGAATTTCAGTACAGCAAATGATGAGGCTCATGGAGCTTGAGAAGTGTGTCGAACCAGGTTATTTACCCTTTACTGAAAAGGATGTCAGAAATTTACTCCAGTCATTTAGGAAGTTAGATCTGGAAGAGGAGAGCATAGACTTATTAAAAATGTGCAGAAATATCAAGGAGAAGGATAGAAACTTCAAATTTGAGTACACAATTGACTCAAAGAATCGGTTAGAGAATATTGCATGGTCATATGCATCCTCAGTACAGTCGTATGAGACATTTGGAGATGCAGTGGTGTTTGATACTACTCATCGCTTAACTGCATTTGACATGCCACTTGGGATATGGGTTGGAATAAATAATTACGGTATGCCTTGCTTCTTTGGCTGTGTGCTTCTACGAGAGGAAAGTGTCAGGTCATTTTCATGGGCGTTGAAGGCATTCCTGGGGTTCATGCATGGGAAGGCACCACAGACCATATTAACTGATCAAAATTTATTTCTGAAAGAAGCAATCAGCGCAGATATGCCAACAACTAAACACGCACTATGTGTATGGATGATAGTTGCGAAGTTTCCATCTTGGTTCAATGCTGTTTTGGGTGAACGTTACAATGAGTGGAAGAGTGAGTTTTATGGCATTTACAATCTGGAGGCCATAGAGGATTTCGAACTAGGGTGGACGGACTTGGTAAATTCTTTTGGGCTTCAGTCTAACAGGCACATAGTCAACTTGTATGATCTGCGCTCACTTTGGGCACTACCGTTCTTGAGAAGCCATTTCTTTGCAGGAATGGCTACAATTGGTCAATCAAAGTCAATTAATGCATTCATCCAACGATTTTTAAGTGCACAAAGTAGGCTGGCGCACTTCATTGAACAAGTGGCTGTTGCTGTGGATTTTAAAGATCAAGCTGGAGAACAACAAACAATGCAACAGAATCTCCAAAATATATGCCTGAAAACAGGAGCACCGATGGAATCCCATGCTGCGTCTGTTCTTACTCCTTATGCTTTCTCAAAGCTTCAAGAACAACTTGTTTTGGCTGCTCACTATGCATCTTTTCAGATGGATGATGGTTTTCTTGTTCGGCATCACACAAAAGGTGATGGAGGCCGGATAGTGTATTGGGTTCCTCGGGAAGGCATCATAACTTGCAGTTGCCATCATTTTGAGTTCTCAGGGATCCTTTGTCGGCATGCACTTCGAGTTCTCTCTACGGGAAATTGCTTTGAAATCCCGGATAGATATCTTCCTGTCCGTTGGCGTCGGATCAGCACGCCTTCTGCAAAACTCCTTTATAGTGTCCCAAGTGATCATGCAGAAAGAATAGAACTGTTACAACGTATAGTATCGACTCTGGTAACAGAATCTGCGAAGTCTAGGGAGAGGCTAGACATAGCAACTGAGCAGGTCTCGATCCTCTTATCTCGGATAAGAGAGCAGCCTGTTTCATTGCAAAATACAAGAGACCTGGCGCTGAAGAATAGGAATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

680

Amino Acids

77.94

Weight (kDa)

7.88

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 62 - 155 2.3e-18 FAR1 DNA-binding domain
HTH_FAR1 PF26175 168 - 223 1.6e-25 FAR1 HTH-like domain
ZSWIM1-3_RNaseH-like PF21056 239 - 359 7.3e-06 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 278 - 370 1.2e-17 MULE transposase domain
SWIM PF04434 560 - 587 5.4e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015369)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10240 AT1G10240
fragaria_vesca FvH4_5g27741
malus_domestica MD09G1270100.v1.1
prunus_persica Prupe.1G583000_v2.0.a1
pyrus_communis pycom09g18130
rosa_chinensis RchiOBHm_Chr7g0219621
rosa_multiflora Rmu_sc0001828.1_g000008
rosa_roxburghii Rroxscaffold_3G00239970
rosa_rugosa Rorug07G0186600.1
rosa_samantha Rh1BG166000 Rh1DG196600 Rh7AG330400 Rh7CG347700 Rh7DG325700
rosa_wichuraiana Rw7G027810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1942
AccB1I GGYRCC 1 cut(s) 1006
AccB7I CCANNNNNTGG 1 cut(s) 149
AciI CCGC 1 cut(s) 385
AclI AACGTT 1 cut(s) 1147
AclWI GGATC 8 cut(s) 35, 418, 523, 536, 1720, 1733, 1820, 1954
AcsI RAATTY 6 cut(s) 197, 552, 640, 737, 1033, 1234
AcuI CTGAAG 2 cut(s) 27, 1232
AcyI GRCGYC 1 cut(s) 1807
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 5 cut(s) 188, 238, 561, 746, 804
AfiI CCNNNNNNNGG 3 cut(s) 149, 241, 1682
AgsI TTSAA 6 cut(s) 736, 976, 1129, 1418, 1568, 1775
AjnI CCWGG 3 cut(s) 604, 984, 2013
AjuI GAANNNNNNNTTGG 2 cut(s) 468, 500
AluBI AGCT 4 cut(s) 179, 586, 1454, 1564
AluI AGCT 4 cut(s) 179, 586, 1454, 1564
Alw21I GWGCWC 2 cut(s) 1393, 1513
Alw26I GTCTC 4 cut(s) 116, 809, 1960, 2004
Alw44I GTGCAC 1 cut(s) 1389
AlwI GGATC 8 cut(s) 35, 418, 523, 536, 1720, 1733, 1820, 1954
AlwNI CAGNNNCTG 1 cut(s) 1913
Ama87I CYCGRG 1 cut(s) 1677
AoxI GGCC 2 cut(s) 1194, 1654
ApaLI GTGCAC 1 cut(s) 1389
ApeKI GCWGC 5 cut(s) 81, 176, 1529, 1586, 1984
ApoI RAATTY 6 cut(s) 197, 552, 640, 737, 1033, 1234
AseI ATTAAT 1 cut(s) 1362
Asp700I GAANNNNTTC 1 cut(s) 980
AspLEI GCGC 4 cut(s) 1061, 1287, 1408, 2020
AsuC2I CCSGG 1 cut(s) 1781
AsuHPI GGTGA 2 cut(s) 1154, 1658
AsuII TTCGAA 1 cut(s) 1209
AvaI CYCGRG 1 cut(s) 1677
BaeGI GKGCMC 2 cut(s) 1300, 1393
BamHI GGATCC 2 cut(s) 528, 1725
BanI GGYRCC 1 cut(s) 1006
Bbv12I GWGCWC 2 cut(s) 1393, 1513
BbvI GCAGC 5 cut(s) 93, 188, 1516, 1573, 1996
BccI CCATC 7 cut(s) 245, 1126, 1510, 1603, 1610, 1643, 1713
BcgI CGANNNNNNTGC 2 cut(s) 1727, 1761
BciT130I CCWGG 3 cut(s) 606, 986, 2015
BclI TGATCA 2 cut(s) 1027, 1855
BcnI CCSGG 1 cut(s) 1781
BcoDI GTCTC 4 cut(s) 116, 809, 1960, 2004
BfaI CTAG 4 cut(s) 108, 1214, 1923, 1934
BfmI CTRYAG 1 cut(s) 190
BfoI RGCGCY 1 cut(s) 2021
BfuAI ACCTGC 1 cut(s) 1942
BglII AGATCT 1 cut(s) 667
BisI GCNGC 5 cut(s) 82, 177, 1530, 1587, 1985
BlsI GCNGC 5 cut(s) 83, 178, 1531, 1588, 1986
BmcAI AGTACT 1 cut(s) 188
Bme1390I CCNGG 4 cut(s) 606, 986, 1781, 2015
BmeT110I CYCGRG 1 cut(s) 1677
BmiI GGNNCC 5 cut(s) 468, 530, 1008, 1674, 1727
BmrFI CCNGG 4 cut(s) 606, 986, 1781, 2015
BmsI GCATC 6 cut(s) 163, 803, 817, 1607, 1642, 1695
BplI GAGNNNNNCTC 2 cut(s) 1940, 1972
BpmI CTGGAG 5 cut(s) 36, 140, 632, 1211, 1476
Bpu14I TTCGAA 1 cut(s) 1209
BpuEI CTTGAG 2 cut(s) 608, 1330
BpuMI CCSGG 1 cut(s) 1781
BsaBI GATNNNNATC 1 cut(s) 1788
BsaHI GRCGYC 1 cut(s) 1807
BsaI GGTCTC 2 cut(s) 1960, 2004
BsaJI CCNNGG 2 cut(s) 985, 1676
BsaXI ACNNNNNCTCC 4 cut(s) 816, 846, 1467, 1497
Bsc4I CCNNNNNNNGG 3 cut(s) 149, 241, 1682
Bse1I ACTGG 3 cut(s) 123, 436, 649
Bse3DI GCAATG 2 cut(s) 215, 1994
Bse8I GATNNNNATC 1 cut(s) 1788
BseBI CCWGG 3 cut(s) 606, 986, 2015
BseDI CCNNGG 2 cut(s) 985, 1676
BseGI GGATG 8 cut(s) 76, 320, 374, 637, 794, 1104, 1371, 1618
BseJI GATNNNNATC 1 cut(s) 1788
BseLI CCNNNNNNNGG 3 cut(s) 149, 241, 1682
BseMI GCAATG 2 cut(s) 215, 1994
BseMII CTCAG 4 cut(s) 60, 813, 1734, 1938
BseNI ACTGG 3 cut(s) 123, 436, 649
BseRI GAGGAG 1 cut(s) 692
BseSI GKGCMC 2 cut(s) 1300, 1393
BseXI GCAGC 5 cut(s) 93, 188, 1516, 1573, 1996
BsgI GTGCAG 1 cut(s) 724
BshFI GGCC 2 cut(s) 1196, 1656
BshNI GGYRCC 1 cut(s) 1006
BsiHKAI GWGCWC 2 cut(s) 1393, 1513
BsiHKCI CYCGRG 1 cut(s) 1677
BsiSI CCGG 4 cut(s) 226, 526, 1657, 1781
BslFI GGGAC 2 cut(s) 279, 1832
BslI CCNNNNNNNGG 3 cut(s) 149, 241, 1682
BsmAI GTCTC 4 cut(s) 116, 809, 1960, 2004
BsmFI GGGAC 2 cut(s) 279, 1832
BsmI GAATGC 2 cut(s) 980, 1367
BsnI GGCC 2 cut(s) 1196, 1656
Bso31I GGTCTC 2 cut(s) 1960, 2004
BsoBI CYCGRG 1 cut(s) 1677
Bsp119I TTCGAA 1 cut(s) 1209
Bsp1286I GDGCHC 3 cut(s) 1300, 1393, 1513
BspACI CCGC 1 cut(s) 385
BspANI GGCC 2 cut(s) 1196, 1656
BspCNI CTCAG 4 cut(s) 59, 812, 1733, 1939
BspHI TCATGA 2 cut(s) 169, 454
BspLI GGNNCC 5 cut(s) 468, 530, 1008, 1674, 1727
BspMI ACCTGC 1 cut(s) 1942
BspPI GGATC 8 cut(s) 35, 418, 523, 536, 1720, 1733, 1820, 1954
BspT104I TTCGAA 1 cut(s) 1209
BspT107I GGYRCC 1 cut(s) 1006
BspTNI GGTCTC 2 cut(s) 1960, 2004
BsrDI GCAATG 2 cut(s) 215, 1994
BsrI ACTGG 3 cut(s) 123, 436, 649
BssECI CCNNGG 2 cut(s) 985, 1676
BssNI GRCGYC 1 cut(s) 1807
Bst2UI CCWGG 3 cut(s) 606, 986, 2015
Bst4CI ACNGT 6 cut(s) 236, 296, 807, 908, 1305, 1878
Bst6I CTCTTC 3 cut(s) 3, 669, 1157
BstACI GRCGYC 1 cut(s) 1807
BstBI TTCGAA 1 cut(s) 1209
BstC8I GCNNGC 4 cut(s) 335, 1404, 1740, 1820
BstDEI CTNAG 4 cut(s) 46, 799, 1720, 1947
BstENI CCTNNNNNAGG 1 cut(s) 1680
BstF5I GGATG 8 cut(s) 76, 320, 374, 637, 794, 1104, 1371, 1618
BstH2I RGCGCY 1 cut(s) 2021
BstHHI GCGC 4 cut(s) 1061, 1287, 1408, 2020
BstMAI GTCTC 4 cut(s) 116, 809, 1960, 2004
BstMWI GCNNNNNNNGC 6 cut(s) 583, 924, 977, 1058, 1334, 1595
BstNI CCWGG 3 cut(s) 606, 986, 2015
BstNSI RCATGY 3 cut(s) 385, 874, 1742
BstSCI CCNGG 4 cut(s) 604, 984, 1779, 2013
BstSFI CTRYAG 1 cut(s) 190
BstSLI GKGCMC 2 cut(s) 1300, 1393
BstV1I GCAGC 5 cut(s) 93, 188, 1516, 1573, 1996
BstX2I RGATCY 3 cut(s) 528, 667, 1725
BstXI CCANNNNNNTGG 1 cut(s) 299
BstYI RGATCY 3 cut(s) 528, 667, 1725
BsuRI GGCC 2 cut(s) 1196, 1656
BtgZI GCGATG 1 cut(s) 836
BtsCI GGATG 8 cut(s) 76, 320, 374, 637, 794, 1104, 1371, 1618
BtsI GCAGTG 2 cut(s) 91, 837
BtsIMutI CAGTG 3 cut(s) 91, 116, 837
BveI ACCTGC 1 cut(s) 1942
Cac8I GCNNGC 4 cut(s) 335, 1404, 1740, 1820
CaiI CAGNNNCTG 1 cut(s) 1913
CciI TCATGA 2 cut(s) 169, 454
CfoI GCGC 4 cut(s) 1061, 1287, 1408, 2020
CseI GACGC 3 cut(s) 285, 1521, 1796
CsiI ACCWGGT 1 cut(s) 604
Csp6I GTAC 5 cut(s) 187, 237, 560, 745, 803
CviQI GTAC 5 cut(s) 187, 237, 560, 745, 803
DdeI CTNAG 4 cut(s) 46, 799, 1720, 1947
DraI TTTAAA 1 cut(s) 1444
DraIII CACNNNGTG 1 cut(s) 1091
Eam1104I CTCTTC 3 cut(s) 3, 669, 1157
EarI CTCTTC 3 cut(s) 3, 669, 1157
Eco31I GGTCTC 2 cut(s) 1960, 2004
Eco32I GATATC 1 cut(s) 1790
Eco57I CTGAAG 2 cut(s) 27, 1232
Eco88I CYCGRG 1 cut(s) 1677
EcoNI CCTNNNNNAGG 1 cut(s) 1680
EcoRII CCWGG 3 cut(s) 604, 984, 2013
EcoRV GATATC 1 cut(s) 1790
EcoT22I ATGCAT 4 cut(s) 796, 999, 1369, 1600
FalI AAGNNNNNCTT 2 cut(s) 1560, 1592
FaqI GGGAC 2 cut(s) 279, 1832
FauNDI CATATG 1 cut(s) 790
FbaI TGATCA 2 cut(s) 1027, 1855
Fnu4HI GCNGC 5 cut(s) 82, 177, 1530, 1587, 1985
FokI GGATG 8 cut(s) 83, 307, 381, 644, 781, 1111, 1358, 1625
Fsp4HI GCNGC 5 cut(s) 82, 177, 1530, 1587, 1985
FspBI CTAG 4 cut(s) 108, 1214, 1923, 1934
GlaI GCGC 4 cut(s) 1060, 1286, 1407, 2019
GluI GCNGC 5 cut(s) 82, 177, 1530, 1587, 1985
GsuI CTGGAG 5 cut(s) 36, 140, 632, 1211, 1476
HaeII RGCGCY 1 cut(s) 2021
HaeIII GGCC 2 cut(s) 1196, 1656
HapII CCGG 4 cut(s) 226, 526, 1657, 1781
HgaI GACGC 3 cut(s) 285, 1521, 1796
HhaI GCGC 4 cut(s) 1061, 1287, 1408, 2020
Hin1I GRCGYC 1 cut(s) 1807
Hin6I GCGC 4 cut(s) 1059, 1285, 1406, 2018
HinP1I GCGC 4 cut(s) 1059, 1285, 1406, 2018
HincII GTYRAC 1 cut(s) 1270
HindII GTYRAC 1 cut(s) 1270
HindIII AAGCTT 1 cut(s) 1562
HpaII CCGG 4 cut(s) 226, 526, 1657, 1781
HphI GGTGA 2 cut(s) 1154, 1658
Hpy166II GTNNAC 5 cut(s) 747, 1145, 1221, 1270, 1391
Hpy188I TCNGA 9 cut(s) 7, 49, 312, 517, 638, 1044, 1608, 1812, 1974
Hpy8I GTNNAC 5 cut(s) 747, 1145, 1221, 1270, 1391
Hpy99I CGWCG 1 cut(s) 1812
HpyAV CCTTC 5 cut(s) 715, 970, 997, 1676, 1833
HpyCH4III ACNGT 6 cut(s) 236, 296, 807, 908, 1305, 1878
HpyCH4IV ACGT 2 cut(s) 1147, 1885
HpyF10VI GCNNNNNNNGC 6 cut(s) 583, 924, 977, 1058, 1334, 1595
HpyF3I CTNAG 4 cut(s) 46, 799, 1720, 1947
HpySE526I ACGT 2 cut(s) 1147, 1885
Hsp92I GRCGYC 1 cut(s) 1807
HspAI GCGC 4 cut(s) 1059, 1285, 1406, 2018
Ksp22I TGATCA 2 cut(s) 1027, 1855
LmnI GCTCC 3 cut(s) 466, 583, 1508
Lsp1109I GCAGC 5 cut(s) 93, 188, 1516, 1573, 1996
LweI GCATC 6 cut(s) 163, 803, 817, 1607, 1642, 1695
MabI ACCWGGT 1 cut(s) 604
MaeI CTAG 4 cut(s) 108, 1214, 1923, 1934
MaeII ACGT 2 cut(s) 1147, 1885
MaeIII GTNAC 4 cut(s) 427, 1148, 1878, 1903
MboII GAAGA 7 cut(s) 20, 354, 479, 686, 1174, 1784, 2035
MfeI CAATTG 2 cut(s) 750, 1341
MflI RGATCY 3 cut(s) 528, 667, 1725
MhlI GDGCHC 3 cut(s) 1300, 1393, 1513
MlyI GAGTC 2 cut(s) 749, 1891
MmeI TCCRAC 3 cut(s) 871, 1399, 1790
Mph1103I ATGCAT 4 cut(s) 796, 999, 1369, 1600
MroXI GAANNNNTTC 1 cut(s) 980
MseI TTAA 6 cut(s) 695, 857, 1022, 1362, 1385, 1443
MslI CAYNNNNRTG 3 cut(s) 418, 453, 964
MspI CCGG 4 cut(s) 226, 526, 1657, 1781
MspR9I CCNGG 4 cut(s) 606, 986, 1781, 2015
MunI CAATTG 2 cut(s) 750, 1341
Mva1269I GAATGC 2 cut(s) 980, 1367
MvaI CCWGG 3 cut(s) 606, 986, 2015
MwoI GCNNNNNNNGC 6 cut(s) 583, 924, 977, 1058, 1334, 1595
NciI CCSGG 1 cut(s) 1781
NdeI CATATG 1 cut(s) 790
NlaIV GGNNCC 5 cut(s) 468, 530, 1008, 1674, 1727
NmuCI GTSAC 1 cut(s) 427
NsiI ATGCAT 4 cut(s) 796, 999, 1369, 1600
NspI RCATGY 3 cut(s) 385, 874, 1742
NspV TTCGAA 1 cut(s) 1209
PaeI GCATGC 1 cut(s) 1742
PagI TCATGA 2 cut(s) 169, 454
PcsI WCGNNNNNNNCGW 1 cut(s) 346
PctI GAATGC 2 cut(s) 980, 1367
PdmI GAANNNNTTC 1 cut(s) 980
PfeI GAWTC 8 cut(s) 92, 139, 216, 512, 763, 1480, 1520, 1910
PflMI CCANNNNNTGG 1 cut(s) 149
PfoI TCCNGGA 1 cut(s) 1779
PkrI GCNGC 5 cut(s) 83, 178, 1531, 1588, 1986
PleI GAGTC 2 cut(s) 749, 1891
PpsI GAGTC 2 cut(s) 749, 1891
PshBI ATTAAT 1 cut(s) 1362
Psp1406I AACGTT 1 cut(s) 1147
Psp6I CCWGG 3 cut(s) 604, 984, 2013
PspGI CCWGG 3 cut(s) 604, 984, 2013
PspN4I GGNNCC 5 cut(s) 468, 530, 1008, 1674, 1727
PstNI CAGNNNCTG 1 cut(s) 1913
PsuI RGATCY 3 cut(s) 528, 667, 1725
RsaI GTAC 5 cut(s) 188, 238, 561, 746, 804
RsaNI GTAC 5 cut(s) 187, 237, 560, 745, 803
RseI CAYNNNNRTG 3 cut(s) 418, 453, 964
SaqAI TTAA 6 cut(s) 695, 857, 1022, 1362, 1385, 1443
SatI GCNGC 5 cut(s) 82, 177, 1530, 1587, 1985
ScaI AGTACT 1 cut(s) 188
SchI GAGTC 2 cut(s) 749, 1891
ScrFI CCNGG 4 cut(s) 606, 986, 1781, 2015
SduI GDGCHC 3 cut(s) 1300, 1393, 1513
SexAI ACCWGGT 1 cut(s) 604
SfaNI GCATC 6 cut(s) 163, 803, 817, 1607, 1642, 1695
SfcI CTRYAG 1 cut(s) 190
SfuI TTCGAA 1 cut(s) 1209
SmiMI CAYNNNNRTG 3 cut(s) 418, 453, 964
SmlI CTYRAG 2 cut(s) 587, 1309
SmoI CTYRAG 2 cut(s) 587, 1309
SphI GCATGC 1 cut(s) 1742
SsiI CCGC 1 cut(s) 385
SspI AATATT 1 cut(s) 778
SspMI CTAG 4 cut(s) 108, 1214, 1923, 1934
StyD4I CCNGG 4 cut(s) 604, 984, 1779, 2013
TaaI ACNGT 6 cut(s) 236, 296, 807, 908, 1305, 1878
TaiI ACGT 2 cut(s) 1150, 1888
TaqI TCGA 7 cut(s) 340, 349, 600, 1209, 1747, 1895, 1958
TaqII GACCGA 1 cut(s) 66
TatI WGTACW 4 cut(s) 186, 559, 744, 802
TfiI GAWTC 8 cut(s) 92, 139, 216, 512, 763, 1480, 1520, 1910
Tru1I TTAA 6 cut(s) 695, 857, 1022, 1362, 1385, 1443
Tru9I TTAA 6 cut(s) 695, 857, 1022, 1362, 1385, 1443
TscAI CASTG 3 cut(s) 91, 123, 837
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 5 cut(s) 81, 176, 1529, 1586, 1984
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 8 cut(s) 117, 342, 471, 954, 982, 1360, 1402, 1983
TspGWI ACGGA 2 cut(s) 1238, 1790
TspRI CASTG 3 cut(s) 91, 123, 837
Van91I CCANNNNNTGG 1 cut(s) 149
VneI GTGCAC 1 cut(s) 1389
VspI ATTAAT 1 cut(s) 1362
XagI CCTNNNNNAGG 1 cut(s) 1680
XapI RAATTY 6 cut(s) 197, 552, 640, 737, 1033, 1234
XceI RCATGY 3 cut(s) 385, 874, 1742
XcmI CCANNNNNNNNNTGG 1 cut(s) 882
XmnI GAANNNNTTC 1 cut(s) 980
XspI CTAG 4 cut(s) 108, 1214, 1923, 1934
ZrmI AGTACT 1 cut(s) 188
Zsp2I ATGCAT 4 cut(s) 796, 999, 1369, 1600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.