MD09G1270100.v1.1

protein FAR1-RELATED SEQUENCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0015369
Physical Location & Seq
Forward (+)
34456586 .. 34462048
5463 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1270100.v1.1.491

Sequence Viewer

Length: 2058 bp
ATGATGTCTGAAGACGCTGGACTTAGGAATGACAATATAATGTTAGTGGTTTATGATGATGCTTCGGATCAACGATCTTTGTCTTTGGATGATACCAGCAGCACTGAGGAATCGCCTGATGAGACCAGGCTTTCATTGGAGACCACAAATGATCTAACTCCATATATTGGACAAAGATTTTCTACGCATGATGCAGCTTATGAATACTACAGTGAATTTGCTAAGAGATGTGGATTCTCAATCCGGAGGCACCGCACAGAGGGAAAAGTTGGGGTAGGAAAAGGAATTACAAGACGCTACTTTGTATGTCACCGGGCTGGAAACACCCCCATCAAAAACTCCAGTGAGAGTAAACCTCAAAGGAACAGAAAGTCCTCCCGATGCGGATGCCAAGCTTACATGCGGATAAGCAAGACAACAGAATTAGGAGCACTGGAATGGCGTGTCACAGGTTTTGCAAACCACCATAATCATGAACTCCTGGAACCAAACCAAGTTCGTTTTCTTCCTGCTTACCGAACTATTTCTGAGTCTGATAAGAGCCGGATACTTATGTTTGCCAAGACAGGAATTTCGGTGCAGCAAATGATGAGGCTCATGGAGCTGGAGAAGTGTGTGGAACCGGGGTGTTTACCATTCACTGAAAAGGATGTTAGGAATTTGCTCCAGTCATTTAGGAAATTAGATCCAGAAGAGGAGAGTATTGACTTGTTAAGAATGTGCAGAAGTATCAAGGAGAAAGATCCCAACTTCAAATTTGAGTACACCCTCGACTCAAACCACAGATTAGAGAATATTGCATGGTCATACGCATCATCAGTCCAGGCATATGAGTCATTTGGTGATGCCGTGGTGTTTGATACTACTCACCGCTTAACTGCATTTGACATGCCACTTGGGATATGGGTTGGAATAAACAATTATGGTATGCCTTGTTTTTTCGGCTGTGTGCTTCTACGAGAGGAAAGTTTAAGGTCGTTTTCATGGGCGTTAAAGGCATTCCTGAGCTTCATGTATGGGAAGGCACCACAGACAATATTAACTGACCAAAATGTGTTTCTGAAAGAAGCAATAAGCATGGAAATGCCAACTGCTAAGCATGCACTATGCATATGGATGATAGTGGCAAAGTTTCCCTCCTGGTTCAATGCTGTTTTGGGTGAACGTTACAATGAGTGGAAGAGTGAGTTTTACCGCATATACAATTTGGAGTCCATAGAGGATTTTGAGTTAGGATGGAGGGACTTGGTAAATTCTTTTGGGCTTCACTCTAACAGGCACATAGTCAACTTGTATGGCCTACGTTCGTTATGGGCATTACCGTTCTTGAGAAGCCATTTCTTTGCAGGAATGACTGCAATTGGACAGTCAAAGTCGATTAATGCATTCATCCAACGATTTTTGAGTGCACAGACCCGACTTGCGCACTTTGTTGAACAAGTGGCTGTTGCTGTGGATTTTAAAGATCAAGCTGGAGAACAACAAACAATGCAACAGAATCTCCAAAATATTTGCCTTAAAACAGGAGCGCCCATGGAATCCCATGCTGCCTCAATCCTTACACCTCATGCTTTCTCTAAGCTTCAAGAACAACTTGTTTTGGCTGCCCACTACGCATCTTTTCAGATGGAAGATGGTTTTCTTGTGCGACACCACACAAAAGCTGATGGAGGTCGTAAAGTGTATTGGGTTCCTCGGGAAGGCATCATAAGTTGCAGTTGCCATCACTTTGAGTTCTCTGGAATTCTCTGTCGGCATGCTCTTCGAGTTCTATCCACAGGAAATTGCTTTCAGATCCCTGATAGATACATTCCTGCACGATGGCGCCGGATCAGCATGCCTTCTGCAAAACTCCTTCAGAGTTCCCCAAATGAACATGCGGAAAGAATACAGTTATTGCAGAATATAGTCTCAACTCTTGTAACAGAATCTGCCAAGTCTAGGGAGAGACTAGATATAGCAACTGAGCAAGTCTCCATTCTCTTATCTCGTATACGAGAGGAGCCTGTTTCGTTGCAAAGTACAAGAGAGATTTGTTCTACGCATAGGAATATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

686

Amino Acids

78.61

Weight (kDa)

8.07

Isoelectric Point (pI)

51.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 68 - 161 1.9e-18 FAR1 DNA-binding domain
HTH_FAR1 PF26175 174 - 229 2.8e-26 FAR1 HTH-like domain
ZSWIM1-3_RNaseH-like PF21056 246 - 366 5.6e-07 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 284 - 376 3.7e-18 MULE transposase domain
SWIM PF04434 567 - 593 7e-08 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015369)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10240 AT1G10240
fragaria_vesca FvH4_5g27741
malus_domestica MD09G1270100.v1.1
prunus_persica Prupe.1G583000_v2.0.a1
pyrus_communis pycom09g18130
rosa_chinensis RchiOBHm_Chr7g0219621
rosa_multiflora Rmu_sc0001828.1_g000008
rosa_roxburghii Rroxscaffold_3G00239970
rosa_rugosa Rorug07G0186600.1
rosa_samantha Rh1BG166000 Rh1DG196600 Rh7AG330400 Rh7CG347700 Rh7DG325700
rosa_wichuraiana Rw7G027810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1425
AccB1I GGYRCC 3 cut(s) 249, 1024, 1824
AccB7I CCANNNNNTGG 1 cut(s) 167
AccI GTMKAC 1 cut(s) 1993
AccIII TCCGGA 1 cut(s) 243
AciI CCGC 6 cut(s) 253, 384, 403, 871, 1195, 1880
AclI AACGTT 1 cut(s) 1165
AclWI GGATC 5 cut(s) 75, 680, 737, 1789, 1838
AcsI RAATTY 6 cut(s) 215, 570, 658, 755, 1252, 1743
AcuI CTGAAG 2 cut(s) 30, 1841
AcyI GRCGYC 1 cut(s) 1825
AfaI GTAC 2 cut(s) 764, 2023
AfiI CCNNNNNNNGG 4 cut(s) 167, 259, 1700, 1941
AgsI TTSAA 4 cut(s) 754, 1147, 1436, 1586
AjnI CCWGG 4 cut(s) 125, 480, 822, 1139
AjuI GAANNNNNNNTTGG 4 cut(s) 486, 518, 1041, 1073
AloI GAACNNNNNNTCC 2 cut(s) 356, 388
AluBI AGCT 7 cut(s) 197, 395, 604, 1008, 1472, 1582, 1664
AluI AGCT 7 cut(s) 197, 395, 604, 1008, 1472, 1582, 1664
Alw21I GWGCWC 2 cut(s) 433, 1411
Alw26I GTCTC 5 cut(s) 116, 134, 1915, 1942, 1978
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 5 cut(s) 75, 680, 737, 1789, 1838
AlwNI CAGNNNCTG 1 cut(s) 1931
Ama87I CYCGRG 1 cut(s) 1695
Aor13HI TCCGGA 1 cut(s) 243
AoxI GGCC 1 cut(s) 1297
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 5 cut(s) 99, 194, 580, 1547, 1604
ApoI RAATTY 6 cut(s) 215, 570, 658, 755, 1252, 1743
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AseI ATTAAT 1 cut(s) 1380
Asp700I GAANNNNTTC 1 cut(s) 523
AspLEI GCGC 3 cut(s) 1426, 1531, 1827
AsuC2I CCSGG 2 cut(s) 314, 624
AsuHPI GGTGA 4 cut(s) 302, 854, 860, 1172
AvaI CYCGRG 1 cut(s) 1695
BaeGI GKGCMC 1 cut(s) 1411
BaeI ACNNNNGTAYC 2 cut(s) 539, 572
BanI GGYRCC 3 cut(s) 249, 1024, 1824
BbsI GAAGAC 1 cut(s) 18
Bbv12I GWGCWC 2 cut(s) 433, 1411
BbvI GCAGC 5 cut(s) 111, 206, 592, 1534, 1591
BccI CCATC 7 cut(s) 338, 1230, 1621, 1628, 1661, 1731, 1815
BceAI ACGGC 1 cut(s) 833
BcgI CGANNNNNNTGC 4 cut(s) 369, 403, 1745, 1779
BciT130I CCWGG 4 cut(s) 127, 482, 824, 1141
BciVI GTATCC 1 cut(s) 540
BcnI CCSGG 2 cut(s) 314, 624
BcoDI GTCTC 5 cut(s) 116, 134, 1915, 1942, 1978
BfaI CTAG 2 cut(s) 1941, 1952
BfmI CTRYAG 1 cut(s) 208
BfoI RGCGCY 2 cut(s) 1532, 1828
BfuI GTATCC 1 cut(s) 540
BisI GCNGC 5 cut(s) 100, 195, 581, 1548, 1605
BlpI GCTNAGC 1 cut(s) 1095
BlsI GCNGC 5 cut(s) 101, 196, 582, 1549, 1606
Bme1390I CCNGG 6 cut(s) 127, 314, 482, 624, 824, 1141
BmeT110I CYCGRG 1 cut(s) 1695
BmiI GGNNCC 7 cut(s) 251, 486, 621, 1026, 1692, 1826, 2004
BmrFI CCNGG 6 cut(s) 127, 314, 482, 624, 824, 1141
BmsI GCATC 8 cut(s) 49, 181, 371, 377, 821, 835, 1625, 1713
BpiI GAAGAC 1 cut(s) 18
BplI GAGNNNNNCTC 4 cut(s) 340, 372, 1958, 1990
BpmI CTGGAG 4 cut(s) 325, 626, 650, 1494
Bpu10I CCTNAGC 1 cut(s) 1004
Bpu1102I GCTNAGC 1 cut(s) 1095
BpuEI CTTGAG 1 cut(s) 1348
BpuMI CCSGG 2 cut(s) 314, 624
BsaHI GRCGYC 1 cut(s) 1825
BsaI GGTCTC 2 cut(s) 116, 134
BsaJI CCNNGG 4 cut(s) 623, 849, 1533, 1694
BsaWI WCCGGW 1 cut(s) 243
BsaXI ACNNNNNCTCC 2 cut(s) 1485, 1515
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 259, 1700, 1941
Bse1I ACTGG 3 cut(s) 342, 438, 667
BseAI TCCGGA 1 cut(s) 243
BseBI CCWGG 4 cut(s) 127, 482, 824, 1141
BseDI CCNNGG 4 cut(s) 623, 849, 1533, 1694
BseGI GGATG 6 cut(s) 94, 392, 655, 1122, 1241, 1389
BseLI CCNNNNNNNGG 4 cut(s) 167, 259, 1700, 1941
BseMII CTCAG 4 cut(s) 96, 519, 995, 1956
BseNI ACTGG 3 cut(s) 342, 438, 667
BseRI GAGGAG 2 cut(s) 710, 2015
BseSI GKGCMC 1 cut(s) 1411
BseXI GCAGC 5 cut(s) 111, 206, 592, 1534, 1591
BsgI GTGCAG 3 cut(s) 599, 742, 1800
BshFI GGCC 1 cut(s) 1299
BshNI GGYRCC 3 cut(s) 249, 1024, 1824
BsiHKAI GWGCWC 2 cut(s) 433, 1411
BsiHKCI CYCGRG 1 cut(s) 1695
BsiSI CCGG 5 cut(s) 244, 313, 544, 623, 1828
BslFI GGGAC 1 cut(s) 1256
BslI CCNNNNNNNGG 4 cut(s) 167, 259, 1700, 1941
BsmAI GTCTC 5 cut(s) 116, 134, 1915, 1942, 1978
BsmFI GGGAC 1 cut(s) 1256
BsmI GAATGC 2 cut(s) 998, 1385
BsnI GGCC 1 cut(s) 1299
Bso31I GGTCTC 2 cut(s) 116, 134
BsoBI CYCGRG 1 cut(s) 1695
Bsp1286I GDGCHC 2 cut(s) 433, 1411
Bsp13I TCCGGA 1 cut(s) 243
Bsp143I GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
Bsp1720I GCTNAGC 1 cut(s) 1095
Bsp19I CCATGG 1 cut(s) 1533
BspACI CCGC 6 cut(s) 253, 384, 403, 871, 1195, 1880
BspANI GGCC 1 cut(s) 1299
BspCNI CTCAG 4 cut(s) 97, 520, 996, 1957
BspEI TCCGGA 1 cut(s) 243
BspHI TCATGA 1 cut(s) 472
BspLI GGNNCC 7 cut(s) 251, 486, 621, 1026, 1692, 1826, 2004
BspPI GGATC 5 cut(s) 75, 680, 737, 1789, 1838
BspQI GCTCTTC 1 cut(s) 1767
BspT107I GGYRCC 3 cut(s) 249, 1024, 1824
BspTNI GGTCTC 2 cut(s) 116, 134
BsrI ACTGG 3 cut(s) 342, 438, 667
BssECI CCNNGG 4 cut(s) 623, 849, 1533, 1694
BssMI GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
BssNAI GTATAC 1 cut(s) 1994
BssNI GRCGYC 1 cut(s) 1825
BssT1I CCWWGG 1 cut(s) 1533
Bst1107I GTATAC 1 cut(s) 1994
Bst2UI CCWGG 4 cut(s) 127, 482, 824, 1141
Bst4CI ACNGT 4 cut(s) 212, 1323, 1368, 1893
Bst6I CTCTTC 3 cut(s) 687, 1175, 1767
BstACI GRCGYC 1 cut(s) 1825
BstC8I GCNNGC 3 cut(s) 1101, 1758, 1838
BstDEI CTNAG 8 cut(s) 23, 105, 222, 528, 1004, 1095, 1578, 1965
BstDSI CCRYGG 2 cut(s) 849, 1533
BstENI CCTNNNNNAGG 1 cut(s) 1698
BstF5I GGATG 6 cut(s) 94, 392, 655, 1122, 1241, 1389
BstH2I RGCGCY 2 cut(s) 1532, 1828
BstHHI GCGC 3 cut(s) 1426, 1531, 1827
BstKTI GATC 8 cut(s) 70, 77, 154, 688, 745, 1468, 1797, 1833
BstMAI GTCTC 5 cut(s) 116, 134, 1915, 1942, 1978
BstMBI GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
BstMWI GCNNNNNNNGC 5 cut(s) 601, 995, 1100, 1613, 1833
BstNI CCWGG 4 cut(s) 127, 482, 824, 1141
BstNSI RCATGY 6 cut(s) 403, 892, 1103, 1760, 1840, 1880
BstSCI CCNGG 6 cut(s) 125, 312, 480, 622, 822, 1139
BstSFI CTRYAG 1 cut(s) 208
BstSLI GKGCMC 1 cut(s) 1411
BstV1I GCAGC 5 cut(s) 111, 206, 592, 1534, 1591
BstV2I GAAGAC 1 cut(s) 18
BstX2I RGATCY 3 cut(s) 685, 742, 1794
BstYI RGATCY 3 cut(s) 685, 742, 1794
BstZ17I GTATAC 1 cut(s) 1994
BsuI GTATCC 1 cut(s) 540
BsuRI GGCC 1 cut(s) 1299
BtgI CCRYGG 2 cut(s) 849, 1533
BtsCI GGATG 6 cut(s) 94, 392, 655, 1122, 1241, 1389
BtsIMutI CAGTG 5 cut(s) 102, 217, 349, 431, 639
Cac8I GCNNGC 3 cut(s) 1101, 1758, 1838
CaiI CAGNNNCTG 1 cut(s) 1931
CciI TCATGA 1 cut(s) 472
CfoI GCGC 3 cut(s) 1426, 1531, 1827
CseI GACGC 2 cut(s) 23, 303
Csp6I GTAC 2 cut(s) 763, 2022
CviQI GTAC 2 cut(s) 763, 2022
DdeI CTNAG 8 cut(s) 23, 105, 222, 528, 1004, 1095, 1578, 1965
DinI GGCGCC 1 cut(s) 1826
DpnI GATC 8 cut(s) 69, 76, 153, 687, 744, 1467, 1796, 1832
DpnII GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
DraI TTTAAA 1 cut(s) 1462
Eam1104I CTCTTC 3 cut(s) 687, 1175, 1767
EarI CTCTTC 3 cut(s) 687, 1175, 1767
Eco130I CCWWGG 1 cut(s) 1533
Eco31I GGTCTC 2 cut(s) 116, 134
Eco57I CTGAAG 2 cut(s) 30, 1841
Eco88I CYCGRG 1 cut(s) 1695
EcoNI CCTNNNNNAGG 1 cut(s) 1698
EcoRI GAATTC 1 cut(s) 1743
EcoRII CCWGG 4 cut(s) 125, 480, 822, 1139
EcoT14I CCWWGG 1 cut(s) 1533
EcoT22I ATGCAT 2 cut(s) 1112, 1387
EgeI GGCGCC 1 cut(s) 1826
EheI GGCGCC 1 cut(s) 1826
ErhI CCWWGG 1 cut(s) 1533
FalI AAGNNNNNCTT 2 cut(s) 1578, 1610
FaqI GGGAC 1 cut(s) 1256
FauNDI CATATG 2 cut(s) 829, 1112
FblI GTMKAC 1 cut(s) 1993
Fnu4HI GCNGC 5 cut(s) 100, 195, 581, 1548, 1605
FokI GGATG 6 cut(s) 101, 399, 662, 1129, 1248, 1376
Fsp4HI GCNGC 5 cut(s) 100, 195, 581, 1548, 1605
FspBI CTAG 2 cut(s) 1941, 1952
FspI TGCGCA 1 cut(s) 1425
GlaI GCGC 3 cut(s) 1425, 1530, 1826
GluI GCNGC 5 cut(s) 100, 195, 581, 1548, 1605
GsuI CTGGAG 4 cut(s) 325, 626, 650, 1494
HaeII RGCGCY 2 cut(s) 1532, 1828
HaeIII GGCC 1 cut(s) 1299
HapII CCGG 5 cut(s) 244, 313, 544, 623, 1828
HgaI GACGC 2 cut(s) 23, 303
HhaI GCGC 3 cut(s) 1426, 1531, 1827
Hin1I GRCGYC 1 cut(s) 1825
Hin6I GCGC 3 cut(s) 1424, 1529, 1825
HinP1I GCGC 3 cut(s) 1424, 1529, 1825
HincII GTYRAC 1 cut(s) 1288
HindII GTYRAC 1 cut(s) 1288
HindIII AAGCTT 2 cut(s) 393, 1580
HinfI GANTC 9 cut(s) 110, 234, 530, 773, 833, 1211, 1498, 1538, 1928
HpaII CCGG 5 cut(s) 244, 313, 544, 623, 1828
HphI GGTGA 4 cut(s) 302, 854, 860, 1172
Hpy166II GTNNAC 7 cut(s) 353, 632, 765, 1163, 1288, 1409, 1994
Hpy188I TCNGA 8 cut(s) 10, 67, 529, 535, 1062, 1626, 1794, 1860
Hpy188III TCNNGA 9 cut(s) 244, 378, 473, 689, 1003, 1327, 1586, 1697, 1740
Hpy8I GTNNAC 7 cut(s) 353, 632, 765, 1163, 1288, 1409, 1994
HpyAV CCTTC 4 cut(s) 1015, 1694, 1851, 1865
HpyCH4III ACNGT 4 cut(s) 212, 1323, 1368, 1893
HpyCH4IV ACGT 2 cut(s) 1165, 1303
HpyF10VI GCNNNNNNNGC 5 cut(s) 601, 995, 1100, 1613, 1833
HpyF3I CTNAG 8 cut(s) 23, 105, 222, 528, 1004, 1095, 1578, 1965
HpySE526I ACGT 2 cut(s) 1165, 1303
Hsp92I GRCGYC 1 cut(s) 1825
HspAI GCGC 3 cut(s) 1424, 1529, 1825
KasI GGCGCC 1 cut(s) 1824
Kpn2I TCCGGA 1 cut(s) 243
Kzo9I GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
LguI GCTCTTC 1 cut(s) 1767
LmnI GCTCC 5 cut(s) 428, 601, 669, 1526, 2002
Lsp1109I GCAGC 5 cut(s) 111, 206, 592, 1534, 1591
LweI GCATC 8 cut(s) 49, 181, 371, 377, 821, 835, 1625, 1713
MaeI CTAG 2 cut(s) 1941, 1952
MaeII ACGT 2 cut(s) 1165, 1303
MaeIII GTNAC 4 cut(s) 308, 445, 1166, 1921
MalI GATC 8 cut(s) 69, 76, 153, 687, 744, 1467, 1796, 1832
MboI GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
MboII GAAGA 6 cut(s) 23, 497, 704, 1192, 1643, 1754
MfeI CAATTG 1 cut(s) 1359
MflI RGATCY 3 cut(s) 685, 742, 1794
MhlI GDGCHC 2 cut(s) 433, 1411
Mly113I GGCGCC 1 cut(s) 1825
MlyI GAGTC 4 cut(s) 539, 767, 842, 1220
MmeI TCCRAC 2 cut(s) 889, 1417
Mph1103I ATGCAT 2 cut(s) 1112, 1387
MroI TCCGGA 1 cut(s) 243
MroXI GAANNNNTTC 1 cut(s) 523
MseI TTAA 8 cut(s) 713, 875, 971, 992, 1040, 1380, 1461, 1518
MslI CAYNNNNRTG 4 cut(s) 436, 471, 1082, 1115
MspI CCGG 5 cut(s) 244, 313, 544, 623, 1828
MspR9I CCNGG 6 cut(s) 127, 314, 482, 624, 824, 1141
MunI CAATTG 1 cut(s) 1359
Mva1269I GAATGC 2 cut(s) 998, 1385
MvaI CCWGG 4 cut(s) 127, 482, 824, 1141
MwoI GCNNNNNNNGC 5 cut(s) 601, 995, 1100, 1613, 1833
NarI GGCGCC 1 cut(s) 1825
NciI CCSGG 2 cut(s) 314, 624
NcoI CCATGG 1 cut(s) 1533
NdeI CATATG 2 cut(s) 829, 1112
NdeII GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
NlaIV GGNNCC 7 cut(s) 251, 486, 621, 1026, 1692, 1826, 2004
NmuCI GTSAC 2 cut(s) 308, 445
NsbI TGCGCA 1 cut(s) 1425
NsiI ATGCAT 2 cut(s) 1112, 1387
NspI RCATGY 6 cut(s) 403, 892, 1103, 1760, 1840, 1880
PaeI GCATGC 3 cut(s) 1103, 1760, 1840
PagI TCATGA 1 cut(s) 472
PciSI GCTCTTC 1 cut(s) 1767
PctI GAATGC 2 cut(s) 998, 1385
PdmI GAANNNNTTC 1 cut(s) 523
PfeI GAWTC 5 cut(s) 110, 234, 1498, 1538, 1928
PflMI CCANNNNNTGG 1 cut(s) 167
PfoI TCCNGGA 1 cut(s) 480
PkrI GCNGC 5 cut(s) 101, 196, 582, 1549, 1606
PleI GAGTC 4 cut(s) 538, 767, 841, 1219
PluTI GGCGCC 1 cut(s) 1828
PpsI GAGTC 4 cut(s) 538, 767, 841, 1219
PshBI ATTAAT 1 cut(s) 1380
Psp1406I AACGTT 1 cut(s) 1165
Psp6I CCWGG 4 cut(s) 125, 480, 822, 1139
PspGI CCWGG 4 cut(s) 125, 480, 822, 1139
PspN4I GGNNCC 7 cut(s) 251, 486, 621, 1026, 1692, 1826, 2004
PstNI CAGNNNCTG 1 cut(s) 1931
PsuI RGATCY 3 cut(s) 685, 742, 1794
RsaI GTAC 2 cut(s) 764, 2023
RsaNI GTAC 2 cut(s) 763, 2022
RseI CAYNNNNRTG 4 cut(s) 436, 471, 1082, 1115
SapI GCTCTTC 1 cut(s) 1767
SaqAI TTAA 8 cut(s) 713, 875, 971, 992, 1040, 1380, 1461, 1518
SatI GCNGC 5 cut(s) 100, 195, 581, 1548, 1605
Sau3AI GATC 8 cut(s) 67, 74, 151, 685, 742, 1465, 1794, 1830
SchI GAGTC 4 cut(s) 539, 767, 842, 1220
ScrFI CCNGG 6 cut(s) 127, 314, 482, 624, 824, 1141
SduI GDGCHC 2 cut(s) 433, 1411
SfaNI GCATC 8 cut(s) 49, 181, 371, 377, 821, 835, 1625, 1713
SfcI CTRYAG 1 cut(s) 208
SfoI GGCGCC 1 cut(s) 1826
SmiMI CAYNNNNRTG 4 cut(s) 436, 471, 1082, 1115
SmlI CTYRAG 1 cut(s) 1327
SmoI CTYRAG 1 cut(s) 1327
SphI GCATGC 3 cut(s) 1103, 1760, 1840
SsiI CCGC 6 cut(s) 253, 384, 403, 871, 1195, 1880
SspDI GGCGCC 1 cut(s) 1824
SspI AATATT 4 cut(s) 796, 1038, 1510, 2053
SspMI CTAG 2 cut(s) 1941, 1952
StyD4I CCNGG 6 cut(s) 125, 312, 480, 622, 822, 1139
StyI CCWWGG 1 cut(s) 1533
TaaI ACNGT 4 cut(s) 212, 1323, 1368, 1893
TaiI ACGT 2 cut(s) 1168, 1306
TaqI TCGA 3 cut(s) 771, 1376, 1765
TatI WGTACW 2 cut(s) 762, 2021
TfiI GAWTC 5 cut(s) 110, 234, 1498, 1538, 1928
Tru1I TTAA 8 cut(s) 713, 875, 971, 992, 1040, 1380, 1461, 1518
Tru9I TTAA 8 cut(s) 713, 875, 971, 992, 1040, 1380, 1461, 1518
TscAI CASTG 5 cut(s) 109, 217, 349, 438, 646
TseFI GTSAC 2 cut(s) 308, 445
TseI GCWGC 5 cut(s) 99, 194, 580, 1547, 1604
Tsp45I GTSAC 2 cut(s) 308, 445
TspDTI ATGAA 7 cut(s) 123, 216, 489, 972, 1000, 1378, 1887
TspRI CASTG 5 cut(s) 109, 217, 349, 438, 646
Van91I CCANNNNNTGG 1 cut(s) 167
VneI GTGCAC 1 cut(s) 1407
VspI ATTAAT 1 cut(s) 1380
XagI CCTNNNNNAGG 1 cut(s) 1698
XapI RAATTY 6 cut(s) 215, 570, 658, 755, 1252, 1743
XceI RCATGY 6 cut(s) 403, 892, 1103, 1760, 1840, 1880
XcmI CCANNNNNNNNNTGG 2 cut(s) 133, 900
XmiI GTMKAC 1 cut(s) 1993
XmnI GAANNNNTTC 1 cut(s) 523
XspI CTAG 2 cut(s) 1941, 1952
Zsp2I ATGCAT 2 cut(s) 1112, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.