FvH4_7g15660

Glycosyl transferases group 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012385
Physical Location & Seq
Forward (+)
13500390 .. 13508759
8370 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g15660.t2

Sequence Viewer

Length: 3120 bp
ATGGGTTCTTTGGAAAGTGGGGTTCCATTGAAGAGAGACCCTCTTCTTCGCTCGTCTTCTAATGGTGGCAGAAGTAGTGACAGGCACTTGTTTTTACAGAGACCCAGATCGAGGTTTTCAAGGTTCTTGATTTTGAAGAAGCTTGACTATCTCTTATGGATTTGCACTGTGGCTGTGTTCCTCTTCTTTGTGGTTCTTTTCCAAATGTTCTTGCCTGGTTCTGTGGTGGAGAAGTCTGGGAGTTTGTTGCAGAAGAAGAATGTGGAGCTGGATTATGGAGATTTGAGGTTTGTGAAAGAGTTGGGGTTATTGGATTTTGGGGAAGATATAAGATTTGAGCCTTCAAAGCTTTTGGAGAAGTTTAGGAAAGAAGGTAGAGAGGCTAGTTTGTCTTCTGGTTTCAATAGGACTCTGCAGCATTTTGGGCTCAGAAAACCCCAGCTTGCATTGGTTTTCGCAGATCTGTTGTTTGATTCGCACCAGCTACAGATGGTGACTGTGGCAGCTGCTTTACAGGAGATTGGATATGAATTATGGGTATATTCACTTGAAGATGGTCCTGCACGTGGCGCTTGGAAAAGTTTAGGAGTTCCGGTTACCATTATCCAAACGTGTGATCAGCCAAAGATTGTTGTAGATTGGCTAAATTACAATGGCATACTTGTGAGCTCTCTTGAAGCCAAAGGCATCTTTTCTTGTTTTGTTCAGGAACCTTTCAAGTCTTTACCTGTCATATGGACAATCCATGAAGAAGCGCTTGCCACTCGATCAAGAAAATACTCTTCAAGTAGCCAGATTGAACTTTTAAATGATTGGAAAAGAGTCTTCAACCGATCTACTGTTGTTGTCTTCCCAAATTATTTCCTTCCGATGATTTACTCCACACTTGATGCCGGGAACTTTTTTGTTATTCCTGGTTCTCCTGCTGAAGCTTGCAAGACAGATTCAGATTCTATCGTGGCTTTAGACATAGACAATCTGCAGGGCTCCGCTGGTAATGAGCCTGAGAATGTTGTAATTACAATTGTGGGAAGCAAATTTCTGTACAGGGGCCTGTGGCTGGAACATTCCATTGTTCTGCGAGCTTTACTGCCACTTCTTGAGGACTTTTTGTTGGATAATAATTCCTCTCATCTCAAAATCATTGTTTTGAGCGGAGACTCAACAAGTAACTATAGTTCTGTGGTTGAGGCTATTGCTTACAACTTGAAGTACCCAAGTGGCATTGTGAAGCATGCAGCAATCGATGTGGATGCAGACAATGTTCTAAGCACATCCCACCTCGTGATATATGGATCCTTCCTTGAAGAGCAATCGTTTCCAGACATTTTAATCAAAGCCATGTGCCTTGGGAAAACAGTGGTTGCCCCAGATCTCTCCATGATCAGCAAATATGTTGATGATAGGGTGAATGGCTATCTTTACCCGAGGGAAAATATCAGGGTTCTTTCACAAATCATATTACAAGTGATTCCAAAAGGAAAGCTATCACCTCTATCTCGAAACATTGCCTCGTTGGGGAAACGTACCGCAAAAAGCCTGATGGTGGCGGAAACTGTTGAAGGATACGCTTCACTTCTCGAAAATGTTCTCAAGCTTCCATCAGAAGTTTCACAACCTAAGGCTGCTTCAGAAATCACTCCCAAATGGAAAGAAAAATGGCTATGGAATTTGTTTGAAGCAGTATCAAATTCATCATATCTGGATAGAAATTTGAGAAGCTACACATTTTTAGATGCTTTTGAGGAGCAGTATAATCATACTGAACAACAGAAGCTTAATTCTATACCTGGGACCAATTATTCATTTATATACAGCATATGGGAGGAAGAGAAGAATGCTGAGATGGCTAATATGAAGAGAAGAAAAGAGGGAGAGCTGTTAAAGGATAGAACTGATCAATATCATGGAACATGGGAAGAAGTATATCGAAATGCCAAAAAAGCTGATCGTACCAGGAATGATTTGCATGAAAGGGATGAAGGGGAGATTGAAAGGACAGGCCAACCATTGTGCATATATGAACCTTACTTTGGGGAAGGGACCTGGCCTTTCTTACACCGGACCTCTCTATATCGAGGAATTGGGTTGTCCTCTAAAGGTCGAAGGCCTAGGACTGATGATATTGACGCACCTTCTCGCCTTCCACTTCTTCATAACCCTTATTATCGAGATCTGCTTGGTGAATATGGAGCCTTCTTTTCTATTGCCAACAGAATTGACCGTATACATAAAAATGCATGGATAGGCTTTCAGTCATGGAGGACAACAGCAAGGAAGGCATCTTTGTCTGGAATAGCTGAAAATGCATTGTTAAATGCTATTCAAACAAAAAGGCATGGAGATGCACTCTACTTTTGGGTTAGCATGGACAATGATACACGAAATCCCCTGGGACAAGACTTTTGGTCATTCTGCGATGCTATAAATGCTGGAAACTGCAAGTTTGCGGTTGCTGAAGCCCTTAAAAGGATGTATGGTTTGAAGTACAATTTGGATTCTTTACCACCAATGCCTGTAGATGGGGACACGTGGTCTGTCATGCACAGCTGGGCTTTGCCGACTCGGTCCTTCCTAGAGTTTGTAATGTTTTCTAGAATGTTTGTGGATGCATTGGATGCTGAAATGTATAACGAGCATCATTCAAGTGGACACTGTTATTTGAGTTTGTCAAAAGACAAACATTGCTATTCACGGCTTCTTGAGCTACTGGTAAATGTTTGGGCATACCACAGTGCCAGGCGGATGGTATATGTGAACCCTGAGACTGGTGCAATGCTGGAACAACATAAGTTCAAGAGCCGCAGGGGTCATATGTGGGTCAAATGGTTCTCGGATTCCACCCTAAAGAGCATGGATGAAGAGTTGGCCGAGGAATCAGACATCGAACAACCCACGAGGCGGTGGCTGTGGCCATCAACAGGAGAGGTCTTTTGGCAAGGTATGTATGAAAAAGAGAGACATTTACGGAATAAGCAGAAAGAGAGGAAGAAGCAAAAAAGTAGGGAAAAAATAGAAAGAATAAAGAGACGGACTCACCAGAAAGCAATTGGAAAGTATGTAAAGCCCCCACCAGAAGCAGCAGATAGTTTAAACACGACGATGGTTACAACTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_trans_1_4 Glycos_transf_1

Protein Analysis

1040

Amino Acids

119.11

Weight (kDa)

8.35

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_transf_1 PF00534 207 - 318 3.2e-06 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012385)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G01210
fragaria_vesca FvH4_7g15660 FvH4_7g15660
malus_domestica MD01G1073400.v1.1
prunus_persica Prupe.2G179800_v2.0.a1 Prupe.2G179800_v2.0.a1 Prupe.2G179800_v2.0.a1
pyrus_communis pycom01g10250 pycom07g12650
rosa_chinensis RchiOBHm_Chr1g0358361
rosa_laevigata RLG00000027967
rosa_multiflora Rmu_sc0002144.1_g000017
rosa_roxburghii Rroxscaffold_4G00298130
rosa_rugosa Rorug01G0261100
rosa_samantha Rh1AG275100 Rh1BG242000 Rh1CG258000 Rh1DG270800
rosa_wichuraiana Rw1G024520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1155
AccI GTMKAC 1 cut(s) 2227
AciI CCGC 8 cut(s) 990, 1155, 1530, 1550, 2450, 2743, 2803, 2902
AclWI GGATC 2 cut(s) 1290, 1303
AcoI YGGCCR 2 cut(s) 2868, 2912
AcsI RAATTY 4 cut(s) 1037, 1669, 1690, 1711
AcuI CTGAAG 3 cut(s) 948, 1614, 2478
AcvI CACGTG 2 cut(s) 566, 2532
AdeI CACNNNGTG 1 cut(s) 1285
AfaI GTAC 5 cut(s) 1046, 1214, 1528, 1954, 2489
AfeI AGCGCT 1 cut(s) 756
AflIII ACRYGT 2 cut(s) 611, 2529
AhdI GACNNNNNGTC 2 cut(s) 2407, 2533
AjnI CCWGG 7 cut(s) 214, 913, 1789, 1955, 2045, 2391, 2738
AjuI GAANNNNNNNTTGG 4 cut(s) 2016, 2048, 2477, 2509
Alw21I GWGCWC 1 cut(s) 671
Alw26I GTCTC 6 cut(s) 30, 94, 1152, 2759, 2953, 3022
AlwI GGATC 2 cut(s) 1290, 1303
Ama87I CYCGRG 1 cut(s) 1426
Aor51HI AGCGCT 1 cut(s) 756
AoxI GGCC 6 cut(s) 1051, 2002, 2048, 2108, 2868, 2912
ApeKI GCWGC 6 cut(s) 415, 503, 506, 1238, 1625, 3080
ApoI RAATTY 4 cut(s) 1037, 1669, 1690, 1711
ArsI GACNNNNNNTTYG 2 cut(s) 2388, 2420
Asp700I GAANNNNTTC 1 cut(s) 1587
AspA2I CCTAGG 1 cut(s) 2111
AspLEI GCGC 2 cut(s) 572, 757
AspS9I GGNCC 6 cut(s) 557, 1051, 1794, 2043, 2064, 2568
AsuC2I CCSGG 1 cut(s) 895
AsuHPI GGTGA 5 cut(s) 505, 1420, 1482, 2195, 3029
AvaI CYCGRG 1 cut(s) 1426
AvaII GGWCC 5 cut(s) 557, 1794, 2043, 2064, 2568
AvrII CCTAGG 1 cut(s) 2111
AxyI CCTNAGG 1 cut(s) 1620
BalI TGGCCA 1 cut(s) 2914
BamHI GGATCC 1 cut(s) 1295
BanII GRGCYC 3 cut(s) 429, 671, 989
BauI CACGAG 2 cut(s) 1283, 2896
BbrPI CACGTG 2 cut(s) 566, 2532
BbsI GAAGAC 4 cut(s) 48, 384, 817, 841
Bbv12I GWGCWC 1 cut(s) 671
BbvI GCAGC 6 cut(s) 427, 493, 515, 1250, 1612, 3092
BccI CCATC 9 cut(s) 484, 548, 1537, 1609, 1840, 2516, 2740, 2923, 3097
BceAI ACGGC 1 cut(s) 2711
BcgI CGANNNNNNTGC 2 cut(s) 1235, 1269
BciT130I CCWGG 7 cut(s) 216, 915, 1791, 1957, 2047, 2393, 2740
BciVI GTATCC 1 cut(s) 1559
BclI TGATCA 3 cut(s) 616, 1383, 1897
BcnI CCSGG 1 cut(s) 895
BcoDI GTCTC 6 cut(s) 30, 94, 1152, 2759, 2953, 3022
BfaI CTAG 4 cut(s) 384, 2112, 2576, 2595
BfmI CTRYAG 5 cut(s) 413, 485, 980, 1174, 2517
BfoI RGCGCY 2 cut(s) 573, 758
BfuI GTATCC 1 cut(s) 1559
BglII AGATCT 3 cut(s) 460, 1372, 2173
BisI GCNGC 7 cut(s) 416, 504, 507, 1239, 1626, 2803, 3081
BlnI CCTAGG 1 cut(s) 2111
BlsI GCNGC 7 cut(s) 417, 505, 508, 1240, 1627, 2804, 3082
Bme1390I CCNGG 8 cut(s) 216, 895, 915, 1791, 1957, 2047, 2393, 2740
Bme18I GGWCC 5 cut(s) 557, 1794, 2043, 2064, 2568
BmeRI GACNNNNNGTC 2 cut(s) 2407, 2533
BmeT110I CYCGRG 1 cut(s) 1426
BmgT120I GGNCC 6 cut(s) 557, 1051, 1794, 2043, 2064, 2568
BmiI GGNNCC 8 cut(s) 24, 711, 988, 1052, 1297, 1795, 2044, 2194
BmrFI CCNGG 8 cut(s) 216, 895, 915, 1791, 1957, 2047, 2393, 2740
BpiI GAAGAC 4 cut(s) 48, 384, 817, 841
BplI GAGNNNNNCTC 6 cut(s) 25, 57, 2334, 2366, 3019, 3051
BpuEI CTTGAG 3 cut(s) 1121, 1577, 2723
BpuMI CCSGG 1 cut(s) 895
Bsa29I ATCGAT 1 cut(s) 1245
BsaAI YACGTR 2 cut(s) 566, 2532
BsaBI GATNNNNATC 1 cut(s) 1902
BsaI GGTCTC 2 cut(s) 30, 94
BsaJI CCNNGG 7 cut(s) 1348, 1427, 1790, 2111, 2391, 2392, 2871
BsaWI WCCGGW 2 cut(s) 592, 2061
BsaXI ACNNNNNCTCC 2 cut(s) 579, 609
Bse1I ACTGG 2 cut(s) 2715, 2773
Bse21I CCTNAGG 1 cut(s) 1620
Bse3DI GCAATG 3 cut(s) 1506, 2683, 2781
Bse8I GATNNNNATC 1 cut(s) 1902
BseBI CCWGG 7 cut(s) 216, 915, 1791, 1957, 2047, 2393, 2740
BseCI ATCGAT 1 cut(s) 1245
BseDI CCNNGG 7 cut(s) 1348, 1427, 1790, 2111, 2391, 2392, 2871
BseGI GGATG 8 cut(s) 1258, 1274, 1984, 2478, 2614, 2623, 2751, 2863
BseJI GATNNNNATC 1 cut(s) 1902
BseMI GCAATG 3 cut(s) 1506, 2683, 2781
BseMII CTCAG 4 cut(s) 442, 996, 1833, 2754
BseNI ACTGG 2 cut(s) 2715, 2773
BseRI GAGGAG 1 cut(s) 1760
BseXI GCAGC 6 cut(s) 427, 493, 515, 1250, 1612, 3092
BseYI CCCAGC 2 cut(s) 438, 2550
BsgI GTGCAG 1 cut(s) 546
BshFI GGCC 6 cut(s) 1053, 2004, 2050, 2110, 2870, 2914
BshVI ATCGAT 1 cut(s) 1245
BsiHKAI GWGCWC 1 cut(s) 671
BsiHKCI CYCGRG 1 cut(s) 1426
BsiSI CCGG 3 cut(s) 593, 894, 2062
BslFI GGGAC 4 cut(s) 1807, 2056, 2409, 2540
BsmAI GTCTC 6 cut(s) 30, 94, 1152, 2759, 2953, 3022
BsmBI CGTCTC 1 cut(s) 3022
BsmFI GGGAC 4 cut(s) 1807, 2056, 2409, 2540
BsmI GAATGC 1 cut(s) 1843
BsnI GGCC 6 cut(s) 1053, 2004, 2050, 2110, 2870, 2914
Bso31I GGTCTC 2 cut(s) 30, 94
BsoBI CYCGRG 1 cut(s) 1426
Bsp1286I GDGCHC 3 cut(s) 429, 671, 989
Bsp1407I TGTACA 1 cut(s) 1044
BspACI CCGC 8 cut(s) 990, 1155, 1530, 1550, 2450, 2743, 2803, 2902
BspANI GGCC 6 cut(s) 1053, 2004, 2050, 2110, 2870, 2914
BspCNI CTCAG 4 cut(s) 441, 997, 1834, 2755
BspDI ATCGAT 1 cut(s) 1245
BspLI GGNNCC 8 cut(s) 24, 711, 988, 1052, 1297, 1795, 2044, 2194
BspMAI CTGCAG 2 cut(s) 417, 984
BspPI GGATC 2 cut(s) 1290, 1303
BspQI GCTCTTC 1 cut(s) 1302
BspTNI GGTCTC 2 cut(s) 30, 94
BsrBI CCGCTC 1 cut(s) 1155
BsrDI GCAATG 3 cut(s) 1506, 2683, 2781
BsrGI TGTACA 1 cut(s) 1044
BsrI ACTGG 2 cut(s) 2715, 2773
BssECI CCNNGG 7 cut(s) 1348, 1427, 1790, 2111, 2391, 2392, 2871
BssNAI GTATAC 1 cut(s) 2228
BssSI CACGAG 2 cut(s) 1283, 2896
BssT1I CCWWGG 2 cut(s) 1348, 2111
Bst1107I GTATAC 1 cut(s) 2228
Bst2BI CACGAG 2 cut(s) 1283, 2896
Bst2UI CCWGG 7 cut(s) 216, 915, 1791, 1957, 2047, 2393, 2740
Bst4CI ACNGT 8 cut(s) 169, 499, 841, 1360, 1558, 2225, 2657, 2735
Bst6I CTCTTC 8 cut(s) 26, 48, 188, 787, 1302, 1824, 1853, 2856
BstAPI GCANNNNNTGC 1 cut(s) 2618
BstAUI TGTACA 1 cut(s) 1044
BstBAI YACGTR 2 cut(s) 566, 2532
BstC8I GCNNGC 5 cut(s) 444, 759, 934, 1083, 1236
BstDEI CTNAG 6 cut(s) 428, 1005, 1268, 1620, 1842, 2763
BstEII GGTNACC 1 cut(s) 595
BstF5I GGATG 8 cut(s) 1258, 1274, 1984, 2478, 2614, 2623, 2751, 2863
BstH2I RGCGCY 2 cut(s) 573, 758
BstHHI GCGC 2 cut(s) 572, 757
BstMAI GTCTC 6 cut(s) 30, 94, 1152, 2759, 2953, 3022
BstNI CCWGG 7 cut(s) 216, 915, 1791, 1957, 2047, 2393, 2740
BstNSI RCATGY 1 cut(s) 1238
BstPI GGTNACC 1 cut(s) 595
BstSCI CCNGG 8 cut(s) 214, 893, 913, 1789, 1955, 2045, 2391, 2738
BstSFI CTRYAG 5 cut(s) 413, 485, 980, 1174, 2517
BstV1I GCAGC 6 cut(s) 427, 493, 515, 1250, 1612, 3092
BstV2I GAAGAC 4 cut(s) 48, 384, 817, 841
BstX2I RGATCY 4 cut(s) 460, 1295, 1372, 2173
BstXI CCANNNNNNTGG 1 cut(s) 2746
BstYI RGATCY 4 cut(s) 460, 1295, 1372, 2173
BstZ17I GTATAC 1 cut(s) 2228
Bsu15I ATCGAT 1 cut(s) 1245
Bsu36I CCTNAGG 1 cut(s) 1620
BsuI GTATCC 1 cut(s) 1559
BsuRI GGCC 6 cut(s) 1053, 2004, 2050, 2110, 2870, 2914
BsuTUI ATCGAT 1 cut(s) 1245
BtgZI GCGATG 1 cut(s) 2433
BtsCI GGATG 8 cut(s) 1258, 1274, 1984, 2478, 2614, 2623, 2751, 2863
BtsIMutI CAGTG 4 cut(s) 165, 1365, 2653, 2740
Cac8I GCNNGC 5 cut(s) 444, 759, 934, 1083, 1236
CfoI GCGC 2 cut(s) 572, 757
Cfr13I GGNCC 6 cut(s) 557, 1051, 1794, 2043, 2064, 2568
ClaI ATCGAT 1 cut(s) 1245
CseI GACGC 1 cut(s) 2138
Csp6I GTAC 5 cut(s) 1045, 1213, 1527, 1953, 2488
CspCI CAANNNNNGTGG 2 cut(s) 1230, 1265
CviQI GTAC 5 cut(s) 1045, 1213, 1527, 1953, 2488
DdeI CTNAG 6 cut(s) 428, 1005, 1268, 1620, 1842, 2763
DraI TTTAAA 2 cut(s) 807, 3093
DraIII CACNNNGTG 1 cut(s) 1285
DriI GACNNNNNGTC 2 cut(s) 2407, 2533
EaeI YGGCCR 2 cut(s) 2868, 2912
Eam1104I CTCTTC 8 cut(s) 26, 48, 188, 787, 1302, 1824, 1853, 2856
Eam1105I GACNNNNNGTC 2 cut(s) 2407, 2533
EarI CTCTTC 8 cut(s) 26, 48, 188, 787, 1302, 1824, 1853, 2856
EciI GGCGGA 2 cut(s) 1565, 2758
Ecl136II GAGCTC 1 cut(s) 669
Eco130I CCWWGG 2 cut(s) 1348, 2111
Eco147I AGGCCT 1 cut(s) 2110
Eco24I GRGCYC 3 cut(s) 429, 671, 989
Eco31I GGTCTC 2 cut(s) 30, 94
Eco47I GGWCC 5 cut(s) 557, 1794, 2043, 2064, 2568
Eco47III AGCGCT 1 cut(s) 756
Eco53kI GAGCTC 1 cut(s) 669
Eco57I CTGAAG 3 cut(s) 948, 1614, 2478
Eco72I CACGTG 2 cut(s) 566, 2532
Eco81I CCTNAGG 1 cut(s) 1620
Eco88I CYCGRG 1 cut(s) 1426
Eco91I GGTNACC 1 cut(s) 595
EcoICRI GAGCTC 1 cut(s) 669
EcoO109I RGGNCCY 2 cut(s) 1051, 2043
EcoO65I GGTNACC 1 cut(s) 595
EcoRII CCWGG 7 cut(s) 214, 913, 1789, 1955, 2045, 2391, 2738
EcoT14I CCWWGG 2 cut(s) 1348, 2111
EcoT22I ATGCAT 3 cut(s) 2242, 2311, 2614
EcoT38I GRGCYC 3 cut(s) 429, 671, 989
ErhI CCWWGG 2 cut(s) 1348, 2111
Esp3I CGTCTC 1 cut(s) 3022
FalI AAGNNNNNCTT 2 cut(s) 741, 773
FaqI GGGAC 4 cut(s) 1807, 2056, 2409, 2540
FauNDI CATATG 3 cut(s) 734, 1820, 2814
FbaI TGATCA 3 cut(s) 616, 1383, 1897
FblI GTMKAC 1 cut(s) 2227
Fnu4HI GCNGC 7 cut(s) 416, 504, 507, 1239, 1626, 2803, 3081
FokI GGATG 8 cut(s) 1261, 1265, 1991, 2485, 2621, 2630, 2758, 2870
FriOI GRGCYC 3 cut(s) 429, 671, 989
Fsp4HI GCNGC 7 cut(s) 416, 504, 507, 1239, 1626, 2803, 3081
FspBI CTAG 4 cut(s) 384, 2112, 2576, 2595
GlaI GCGC 2 cut(s) 571, 756
GluI GCNGC 7 cut(s) 416, 504, 507, 1239, 1626, 2803, 3081
GsaI CCCAGC 2 cut(s) 442, 2554
HaeII RGCGCY 2 cut(s) 573, 758
HaeIII GGCC 6 cut(s) 1053, 2004, 2050, 2110, 2870, 2914
HapII CCGG 3 cut(s) 593, 894, 2062
HgaI GACGC 1 cut(s) 2138
HhaI GCGC 2 cut(s) 572, 757
Hin6I GCGC 2 cut(s) 570, 755
HinP1I GCGC 2 cut(s) 570, 755
HindIII AAGCTT 5 cut(s) 140, 347, 930, 1595, 1775
HpaII CCGG 3 cut(s) 593, 894, 2062
HphI GGTGA 5 cut(s) 505, 1420, 1482, 2195, 3029
Hpy166II GTNNAC 3 cut(s) 2228, 2651, 2758
Hpy188I TCNGA 7 cut(s) 431, 870, 949, 1606, 1633, 2836, 2881
Hpy8I GTNNAC 3 cut(s) 2228, 2651, 2758
Hpy99I CGWCG 1 cut(s) 3103
HpyCH4III ACNGT 8 cut(s) 169, 499, 841, 1360, 1558, 2225, 2657, 2735
HpyCH4IV ACGT 4 cut(s) 565, 611, 1525, 2531
HpyF3I CTNAG 6 cut(s) 428, 1005, 1268, 1620, 1842, 2763
HpySE526I ACGT 4 cut(s) 565, 611, 1525, 2531
HspAI GCGC 2 cut(s) 570, 755
Ksp22I TGATCA 3 cut(s) 616, 1383, 1897
LguI GCTCTTC 1 cut(s) 1302
LmnI GCTCC 4 cut(s) 265, 992, 1747, 2192
Lsp1109I GCAGC 6 cut(s) 427, 493, 515, 1250, 1612, 3092
MaeI CTAG 4 cut(s) 384, 2112, 2576, 2595
MaeII ACGT 4 cut(s) 565, 611, 1525, 2531
MaeIII GTNAC 5 cut(s) 77, 493, 595, 1169, 3106
MbiI CCGCTC 1 cut(s) 1155
MfeI CAATTG 2 cut(s) 1023, 3048
MflI RGATCY 4 cut(s) 460, 1295, 1372, 2173
MhlI GDGCHC 3 cut(s) 429, 671, 989
MlsI TGGCCA 1 cut(s) 2914
MluNI TGGCCA 1 cut(s) 2914
MlyI GAGTC 5 cut(s) 403, 831, 1154, 2557, 3028
MmeI TCCRAC 1 cut(s) 1095
Mox20I TGGCCA 1 cut(s) 2914
Mph1103I ATGCAT 3 cut(s) 2242, 2311, 2614
MroXI GAANNNNTTC 1 cut(s) 1587
MscI TGGCCA 1 cut(s) 2914
MseI TTAA 7 cut(s) 806, 1331, 1779, 1883, 2315, 2466, 3092
MslI CAYNNNNRTG 5 cut(s) 662, 2235, 2343, 2646, 3101
Msp20I TGGCCA 1 cut(s) 2914
MspA1I CMGCKG 3 cut(s) 506, 992, 2550
MspI CCGG 3 cut(s) 593, 894, 2062
MspR9I CCNGG 8 cut(s) 216, 895, 915, 1791, 1957, 2047, 2393, 2740
MssI GTTTAAAC 1 cut(s) 3093
MunI CAATTG 2 cut(s) 1023, 3048
Mva1269I GAATGC 1 cut(s) 1843
MvaI CCWGG 7 cut(s) 216, 915, 1791, 1957, 2047, 2393, 2740
NciI CCSGG 1 cut(s) 895
NdeI CATATG 3 cut(s) 734, 1820, 2814
NlaIV GGNNCC 8 cut(s) 24, 711, 988, 1052, 1297, 1795, 2044, 2194
NmeAIII GCCGAG 1 cut(s) 2896
NmuCI GTSAC 2 cut(s) 77, 493
NsiI ATGCAT 3 cut(s) 2242, 2311, 2614
NspI RCATGY 1 cut(s) 1238
PaeI GCATGC 1 cut(s) 1238
PasI CCCWGGG 1 cut(s) 2392
PceI AGGCCT 1 cut(s) 2110
PciSI GCTCTTC 1 cut(s) 1302
PctI GAATGC 1 cut(s) 1843
PdmI GAANNNNTTC 1 cut(s) 1587
PfeI GAWTC 7 cut(s) 473, 944, 950, 1471, 2498, 2837, 2876
PflFI GACNNNGTC 1 cut(s) 2566
PkrI GCNGC 7 cut(s) 417, 505, 508, 1240, 1627, 2804, 3082
PleI GAGTC 5 cut(s) 403, 830, 1154, 2557, 3028
PmaCI CACGTG 2 cut(s) 566, 2532
PmeI GTTTAAAC 1 cut(s) 3093
PmlI CACGTG 2 cut(s) 566, 2532
PpsI GAGTC 5 cut(s) 403, 830, 1154, 2557, 3028
Ppu21I YACGTR 2 cut(s) 566, 2532
PpuMI RGGWCCY 1 cut(s) 2043
Psp124BI GAGCTC 1 cut(s) 671
Psp5II RGGWCCY 1 cut(s) 2043
Psp6I CCWGG 7 cut(s) 214, 913, 1789, 1955, 2045, 2391, 2738
PspCI CACGTG 2 cut(s) 566, 2532
PspEI GGTNACC 1 cut(s) 595
PspFI CCCAGC 2 cut(s) 438, 2550
PspGI CCWGG 7 cut(s) 214, 913, 1789, 1955, 2045, 2391, 2738
PspN4I GGNNCC 8 cut(s) 24, 711, 988, 1052, 1297, 1795, 2044, 2194
PspPI GGNCC 6 cut(s) 557, 1051, 1794, 2043, 2064, 2568
PspPPI RGGWCCY 1 cut(s) 2043
PsrI GAACNNNNNNTAC 2 cut(s) 1162, 1194
PstI CTGCAG 2 cut(s) 417, 984
PsuI RGATCY 4 cut(s) 460, 1295, 1372, 2173
PsyI GACNNNGTC 1 cut(s) 2566
PvuII CAGCTG 2 cut(s) 506, 2550
RsaI GTAC 5 cut(s) 1046, 1214, 1528, 1954, 2489
RsaNI GTAC 5 cut(s) 1045, 1213, 1527, 1953, 2488
RseI CAYNNNNRTG 5 cut(s) 662, 2235, 2343, 2646, 3101
SacI GAGCTC 1 cut(s) 671
SapI GCTCTTC 1 cut(s) 1302
SaqAI TTAA 7 cut(s) 806, 1331, 1779, 1883, 2315, 2466, 3092
SatI GCNGC 7 cut(s) 416, 504, 507, 1239, 1626, 2803, 3081
Sau96I GGNCC 6 cut(s) 557, 1051, 1794, 2043, 2064, 2568
SchI GAGTC 5 cut(s) 403, 831, 1154, 2557, 3028
ScrFI CCNGG 8 cut(s) 216, 895, 915, 1791, 1957, 2047, 2393, 2740
SduI GDGCHC 3 cut(s) 429, 671, 989
SfcI CTRYAG 5 cut(s) 413, 485, 980, 1174, 2517
SinI GGWCC 5 cut(s) 557, 1794, 2043, 2064, 2568
SmiMI CAYNNNNRTG 5 cut(s) 662, 2235, 2343, 2646, 3101
SmlI CTYRAG 3 cut(s) 1100, 1592, 2702
SmoI CTYRAG 3 cut(s) 1100, 1592, 2702
SphI GCATGC 1 cut(s) 1238
SseBI AGGCCT 1 cut(s) 2110
SsiI CCGC 8 cut(s) 990, 1155, 1530, 1550, 2450, 2743, 2803, 2902
SspMI CTAG 4 cut(s) 384, 2112, 2576, 2595
SstI GAGCTC 1 cut(s) 671
StuI AGGCCT 1 cut(s) 2110
StyD4I CCNGG 8 cut(s) 214, 893, 913, 1789, 1955, 2045, 2391, 2738
StyI CCWWGG 2 cut(s) 1348, 2111
TaaI ACNGT 8 cut(s) 169, 499, 841, 1360, 1558, 2225, 2657, 2735
TaiI ACGT 4 cut(s) 568, 614, 1528, 2534
TaqII GACCGA 1 cut(s) 2556
TatI WGTACW 2 cut(s) 1044, 2487
TauI GCSGC 1 cut(s) 2805
TfiI GAWTC 7 cut(s) 473, 944, 950, 1471, 2498, 2837, 2876
Tru1I TTAA 7 cut(s) 806, 1331, 1779, 1883, 2315, 2466, 3092
Tru9I TTAA 7 cut(s) 806, 1331, 1779, 1883, 2315, 2466, 3092
TscAI CASTG 4 cut(s) 172, 1365, 2660, 2740
TseFI GTSAC 2 cut(s) 77, 493
TseI GCWGC 6 cut(s) 415, 503, 506, 1238, 1625, 3080
Tsp45I GTSAC 2 cut(s) 77, 493
TspGWI ACGGA 2 cut(s) 2983, 3046
TspRI CASTG 4 cut(s) 172, 1365, 2660, 2740
Tth111I GACNNNGTC 1 cut(s) 2566
VpaK11BI GGWCC 5 cut(s) 557, 1794, 2043, 2064, 2568
XapI RAATTY 4 cut(s) 1037, 1669, 1690, 1711
XbaI TCTAGA 1 cut(s) 2594
XceI RCATGY 1 cut(s) 1238
XcmI CCANNNNNNNNNTGG 1 cut(s) 3047
XmaJI CCTAGG 1 cut(s) 2111
XmiI GTMKAC 1 cut(s) 2227
XmnI GAANNNNTTC 1 cut(s) 1587
XspI CTAG 4 cut(s) 384, 2112, 2576, 2595
Zsp2I ATGCAT 3 cut(s) 2242, 2311, 2614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.