FvH4_7g20830

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
16847557 .. 16850681
3125 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g20830.t1

Sequence Viewer

Length: 1806 bp
ATGGGTAATGTAACAGTTTCTCCCCAAAATGATACCTTATGGAGATTTTGGGATTCTGATTATTCATACCTGAGATATGAGGGTGTTGCAACATATGTGTCAAAGCCAGAAGCTGTCAAGTTCTCTGCTTCAGTAACGAAGTACATTGCCCCTTCTTCAGTATATGGCACCGCAACCATGCTGGACACGACAAAGGAATCTAGAATGATTGCTAATCTGACATGGAATTTTGATGTTGATCCCGGTTTCAAGTATTTGGTTCGGTTTCACTTCTGTGACATGACGAGTAAGGATGCTGACAAGGTCATGTTCAAAGTTTTTATCAATGATTTGTCTGTCTCTAGCAGTCTTGATCTTAAAAATCTGACATCAAATGTCTTAGGCCGCCCTTATTTTATGGATGTCATCATGAGGGCAAGTGATAGCCCTAAGATGAATGTAAGTGTTGGCCCTTATAGCACAGATGGAGCTTATCTATACCCAATTACCATTCTTAATGGCCTCGAGATCATGAAAGTAAGCAACTCGAGGAGCAGCCTTGATGTCTCGTTGAGTAGCAGCTCTAAGATGAAACTTGGTGTTATAGTGGGTTTGGCTGCTGGATTATTTCTGGCTATTGTTTTGGCTATTGTTTTCTTCCTGCTTTATAGAAGAAGAAGAAGAAGAGGAAGACGAGCACATGCCGTACATTCAAAGGCAGAGGATGTCATGGTGAATGCAGAAGAAGGTAAAGACGCCAATGGCATGGCAATGTTCTCGGCGTCGAAAATTGGGTATCGCTTCCCATTAGCAGCAATTCAAGTGGCTACTGAAAATTTCAGTGAGAATCTGCTCATTGGAGTTGGTGGTTTTGGCAAGGTTTACAAAGGAGTTTTAAGGGACAATACCAAAGTAGCAGTTAAGAGAGGAGCTCCTCAATCAAAGCAGGGTCTTGCAGAATTTCGGACTGAAATTGAAATGTTGTCTCAGTTCCGTCATCGCCATTTGGTGTCCTTGATCGGATATTGTGATGAGAAAGATGAGTTGATCATTATTTACGAGTACATGGAAAATGGGAGCTTGAAGAACCATCTCTATGGCTTAGATCTTCCATGCTTAAGCTGGAGGAAGAGGCTTGAAATATGTGTTGGAGCAGCGAAAGGACTTCACTATCTTCATACCAGCTCTGAAAAGACGATCATTCACCGTGATGTTAAGTCTGCGAATATACTGCTAGATGAGAATTTGATGGTCAAAGTTGCTGATTTTGGGCTTTCAAAAACTGGCCCTGAGATTGATCAGACACATGTCAGCACTGCTGTTAAAGGCAGCTTCGGGTATCTTGATCCAGAGTACTTGACAAGGCAGCAGCTGACTGAGAAATCAGATGTGTACTCATTTGGGGTGGTGATGTTCGAGGTCCTTTGTGGGAGACCTGTTATTGATCCATCGCGTCCAAGGGAAGAGGTAAGTCTAGTTGAATGGGCAATGAAGCGACATCAAAATGGGCAGCTGGAGGAGATTGTTGATCCTCGTCTTGTAGGTCACGTAAAGCCAGACGCACTGAAGAAGTTTGGAGATGTGGCTGCAAAGTGCTTAGCTGAATGTGGTGTTGATCGACCTACTGTGGGGGATGTGTTGTGGAACTTGGAGTTTGTGCTTCAACTCGAAGGAAATGAGGGAAGATCTGATCATGCTAGTCCTGTCAACAACTTGGAGACCAGCACTGTTTCTACTGCAGAATTAAGCATGGGAAGTGTAGGGGACATTGCTGGTATTTCGATGAGCAAGGTTTTTGCTCAGATGGTGAGAGAGGACATGAGGTAG

Protein Analysis

602

Amino Acids

66.91

Weight (kDa)

7.2

Isoelectric Point (pI)

35.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 5 - 173 6.4e-14 Malectin-like domain
Pkinase PF00069 277 - 539 2.1e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 279 - 502 6.9e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014981)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39360
fragaria_vesca FvH4_7g20830
malus_domestica MD07G1186200.v1.1
prunus_persica Prupe.2G225000_v2.0.a1
pyrus_communis pycom07g17730
rosa_chinensis RchiOBHm_Chr1g0365071
rosa_laevigata RLG00000027447
rosa_multiflora Rmu_ssc0000112.1_g000011
rosa_roxburghii Rroxscaffold_4G00291500 Rroxscaffold_4G00291950
rosa_rugosa Rorug01G0319300
rosa_samantha Rh1AG328300 Rh1BG289800 Rh1CG306500 Rh1DG321300
rosa_wichuraiana Rw1G029140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 167
AccII CGCG 1 cut(s) 1432
AciI CCGC 2 cut(s) 171, 385
AclWI GGATC 4 cut(s) 233, 1319, 1418, 1502
AcsI RAATTY 4 cut(s) 226, 814, 938, 1222
AcuI CTGAAG 3 cut(s) 114, 141, 1565
AcyI GRCGYC 2 cut(s) 735, 761
AfaI GTAC 5 cut(s) 143, 687, 1043, 1334, 1373
AfiI CCNNNNNNNGG 1 cut(s) 1607
AflII CTTAAG 1 cut(s) 1096
AflIII ACRYGT 1 cut(s) 1285
AjuI GAANNNNNNNTTGG 2 cut(s) 1110, 1142
AleI CACNNNNGTG 1 cut(s) 273
Alw21I GWGCWC 2 cut(s) 679, 913
Alw26I GTCTC 5 cut(s) 343, 550, 969, 1405, 1691
AlwI GGATC 4 cut(s) 233, 1319, 1418, 1502
AlwNI CAGNNNCTG 2 cut(s) 113, 1351
Ama87I CYCGRG 2 cut(s) 503, 526
AoxI GGCC 4 cut(s) 382, 448, 499, 1264
ApoI RAATTY 4 cut(s) 226, 814, 938, 1222
AspS9I GGNCC 3 cut(s) 449, 1265, 1399
AsuC2I CCSGG 1 cut(s) 243
AsuHPI GGTGA 4 cut(s) 724, 1175, 1399, 1798
AvaI CYCGRG 2 cut(s) 503, 526
AvaII GGWCC 1 cut(s) 1399
BanI GGYRCC 1 cut(s) 167
BanII GRGCYC 1 cut(s) 913
BbsI GAAGAC 1 cut(s) 676
Bbv12I GWGCWC 2 cut(s) 679, 913
BccI CCATC 5 cut(s) 458, 1077, 1222, 1435, 1777
BceAI ACGGC 1 cut(s) 668
BcgI CGANNNNNNTGC 4 cut(s) 738, 772, 1192, 1226
BclI TGATCA 3 cut(s) 1026, 1276, 1669
BcnI CCSGG 1 cut(s) 243
BcoDI GTCTC 5 cut(s) 343, 550, 969, 1405, 1691
BfaI CTAG 5 cut(s) 201, 342, 1214, 1454, 1677
BfmI CTRYAG 1 cut(s) 1716
BfrI CTTAAG 1 cut(s) 1096
BglII AGATCT 2 cut(s) 1084, 1664
BlpI GCTNAGC 1 cut(s) 1576
BmcAI AGTACT 1 cut(s) 1334
Bme1390I CCNGG 1 cut(s) 243
Bme18I GGWCC 1 cut(s) 1399
BmeT110I CYCGRG 2 cut(s) 503, 526
BmgT120I GGNCC 3 cut(s) 449, 1265, 1399
BmiI GGNNCC 1 cut(s) 169
BmrFI CCNGG 1 cut(s) 243
BmsI GCATC 1 cut(s) 283
BoxI GACNNNNGTC 1 cut(s) 1286
BpiI GAAGAC 1 cut(s) 676
BplI GAGNNNNNCTC 2 cut(s) 895, 927
BpmI CTGGAG 2 cut(s) 1123, 1514
Bpu1102I GCTNAGC 1 cut(s) 1576
BpuMI CCSGG 1 cut(s) 243
BsaAI YACGTR 1 cut(s) 1528
BsaBI GATNNNNATC 1 cut(s) 237
BsaHI GRCGYC 2 cut(s) 735, 761
BsaI GGTCTC 2 cut(s) 1405, 1691
BsaJI CCNNGG 1 cut(s) 1436
BsaXI ACNNNNNCTCC 1 cut(s) 34
Bsc4I CCNNNNNNNGG 1 cut(s) 1607
Bse1I ACTGG 1 cut(s) 1267
Bse3DI GCAATG 4 cut(s) 144, 756, 1473, 1746
Bse8I GATNNNNATC 1 cut(s) 237
BseDI CCNNGG 1 cut(s) 1436
BseGI GGATG 4 cut(s) 298, 406, 709, 1618
BseJI GATNNNNATC 1 cut(s) 237
BseLI CCNNNNNNNGG 1 cut(s) 1607
BseMI GCAATG 4 cut(s) 144, 756, 1473, 1746
BseMII CTCAG 5 cut(s) 62, 980, 1260, 1347, 1793
BseNI ACTGG 1 cut(s) 1267
BseRI GAGGAG 4 cut(s) 544, 903, 921, 1511
Bsh1236I CGCG 1 cut(s) 1432
BshFI GGCC 4 cut(s) 384, 450, 501, 1266
BshNI GGYRCC 1 cut(s) 167
BsiHKAI GWGCWC 2 cut(s) 679, 913
BsiHKCI CYCGRG 2 cut(s) 503, 526
BsiSI CCGG 1 cut(s) 243
BslFI GGGAC 2 cut(s) 893, 1757
BslI CCNNNNNNNGG 1 cut(s) 1607
BsmAI GTCTC 5 cut(s) 343, 550, 969, 1405, 1691
BsmFI GGGAC 2 cut(s) 893, 1757
BsmI GAATGC 1 cut(s) 721
BsnI GGCC 4 cut(s) 384, 450, 501, 1266
Bso31I GGTCTC 2 cut(s) 1405, 1691
BsoBI CYCGRG 2 cut(s) 503, 526
Bsp1286I GDGCHC 2 cut(s) 679, 913
Bsp1720I GCTNAGC 1 cut(s) 1576
BspACI CCGC 2 cut(s) 171, 385
BspANI GGCC 4 cut(s) 384, 450, 501, 1266
BspCNI CTCAG 5 cut(s) 63, 979, 1261, 1348, 1792
BspFNI CGCG 1 cut(s) 1432
BspHI TCATGA 2 cut(s) 408, 510
BspLI GGNNCC 1 cut(s) 169
BspMAI CTGCAG 1 cut(s) 1720
BspPI GGATC 4 cut(s) 233, 1319, 1418, 1502
BspT107I GGYRCC 1 cut(s) 167
BspTI CTTAAG 1 cut(s) 1096
BspTNI GGTCTC 2 cut(s) 1405, 1691
BsrDI GCAATG 4 cut(s) 144, 756, 1473, 1746
BsrI ACTGG 1 cut(s) 1267
BssECI CCNNGG 1 cut(s) 1436
BssNI GRCGYC 2 cut(s) 735, 761
BssT1I CCWWGG 1 cut(s) 1436
Bst4CI ACNGT 4 cut(s) 16, 1187, 1606, 1708
Bst6I CTCTTC 3 cut(s) 658, 1103, 1437
BstACI GRCGYC 2 cut(s) 735, 761
BstAFI CTTAAG 1 cut(s) 1096
BstBAI YACGTR 1 cut(s) 1528
BstF5I GGATG 4 cut(s) 298, 406, 709, 1618
BstFNI CGCG 1 cut(s) 1432
BstMAI GTCTC 5 cut(s) 343, 550, 969, 1405, 1691
BstMWI GCNNNNNNNGC 1 cut(s) 456
BstNSI RCATGY 2 cut(s) 683, 1289
BstPAI GACNNNNGTC 1 cut(s) 1286
BstSCI CCNGG 1 cut(s) 241
BstSFI CTRYAG 1 cut(s) 1716
BstUI CGCG 1 cut(s) 1432
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 2 cut(s) 1084, 1664
BstXI CCANNNNNNTGG 2 cut(s) 745, 1076
BstYI RGATCY 2 cut(s) 1084, 1664
BsuRI GGCC 4 cut(s) 384, 450, 501, 1266
BtgZI GCGATG 2 cut(s) 962, 1413
BtsCI GGATG 4 cut(s) 298, 406, 709, 1618
BtsI GCAGTG 1 cut(s) 1293
BtsIMutI CAGTG 4 cut(s) 826, 1293, 1541, 1704
CaiI CAGNNNCTG 2 cut(s) 113, 1351
CciI TCATGA 2 cut(s) 408, 510
Cfr13I GGNCC 3 cut(s) 449, 1265, 1399
CseI GACGC 4 cut(s) 743, 750, 1421, 1547
Csp6I GTAC 5 cut(s) 142, 686, 1042, 1333, 1372
CspCI CAANNNNNGTGG 2 cut(s) 783, 818
CviQI GTAC 5 cut(s) 142, 686, 1042, 1333, 1372
Eam1104I CTCTTC 3 cut(s) 658, 1103, 1437
EarI CTCTTC 3 cut(s) 658, 1103, 1437
Ecl136II GAGCTC 1 cut(s) 911
Eco130I CCWWGG 1 cut(s) 1436
Eco24I GRGCYC 1 cut(s) 913
Eco31I GGTCTC 2 cut(s) 1405, 1691
Eco47I GGWCC 1 cut(s) 1399
Eco53kI GAGCTC 1 cut(s) 911
Eco57I CTGAAG 3 cut(s) 114, 141, 1565
Eco88I CYCGRG 2 cut(s) 503, 526
EcoICRI GAGCTC 1 cut(s) 911
EcoO109I RGGNCCY 1 cut(s) 1399
EcoT14I CCWWGG 1 cut(s) 1436
EcoT38I GRGCYC 1 cut(s) 913
ErhI CCWWGG 1 cut(s) 1436
FaqI GGGAC 2 cut(s) 893, 1757
FauNDI CATATG 1 cut(s) 94
FbaI TGATCA 3 cut(s) 1026, 1276, 1669
FokI GGATG 4 cut(s) 305, 413, 716, 1625
FriOI GRGCYC 1 cut(s) 913
FspBI CTAG 5 cut(s) 201, 342, 1214, 1454, 1677
GsuI CTGGAG 2 cut(s) 1123, 1514
HaeIII GGCC 4 cut(s) 384, 450, 501, 1266
HapII CCGG 1 cut(s) 243
HgaI GACGC 4 cut(s) 743, 750, 1421, 1547
Hin1I GRCGYC 2 cut(s) 735, 761
HincII GTYRAC 1 cut(s) 1687
HindII GTYRAC 1 cut(s) 1687
HinfI GANTC 3 cut(s) 53, 197, 826
HpaII CCGG 1 cut(s) 243
HphI GGTGA 4 cut(s) 724, 1175, 1399, 1798
Hpy166II GTNNAC 3 cut(s) 862, 1372, 1687
Hpy188III TCNNGA 7 cut(s) 201, 350, 409, 505, 511, 1322, 1328
Hpy8I GTNNAC 3 cut(s) 862, 1372, 1687
Hpy99I CGWCG 1 cut(s) 766
HpyAV CCTTC 3 cut(s) 162, 719, 1643
HpyCH4III ACNGT 4 cut(s) 16, 1187, 1606, 1708
HpyCH4IV ACGT 1 cut(s) 1527
HpyCH4V TGCA 5 cut(s) 89, 719, 935, 1568, 1718
HpyF10VI GCNNNNNNNGC 1 cut(s) 456
HpySE526I ACGT 1 cut(s) 1527
Hsp92I GRCGYC 2 cut(s) 735, 761
Ksp22I TGATCA 3 cut(s) 1026, 1276, 1669
LmnI GCTCC 6 cut(s) 467, 531, 908, 916, 1056, 1130
LweI GCATC 1 cut(s) 283
MaeI CTAG 5 cut(s) 201, 342, 1214, 1454, 1677
MaeII ACGT 1 cut(s) 1527
MaeIII GTNAC 4 cut(s) 10, 133, 275, 1523
MflI RGATCY 2 cut(s) 1084, 1664
MhlI GDGCHC 2 cut(s) 679, 913
MluCI AATT 9 cut(s) 226, 483, 768, 795, 814, 938, 951, 1222, 1721
MmeI TCCRAC 1 cut(s) 1108
MseI TTAA 8 cut(s) 357, 495, 875, 900, 1097, 1194, 1302, 1724
MslI CAYNNNNRTG 5 cut(s) 273, 749, 1074, 1188, 1482
MspA1I CMGCKG 2 cut(s) 1351, 1492
MspCI CTTAAG 1 cut(s) 1096
MspI CCGG 1 cut(s) 243
MspR9I CCNGG 1 cut(s) 243
Mva1269I GAATGC 1 cut(s) 721
MvnI CGCG 1 cut(s) 1432
MwoI GCNNNNNNNGC 1 cut(s) 456
NciI CCSGG 1 cut(s) 243
NdeI CATATG 1 cut(s) 94
NlaIV GGNNCC 1 cut(s) 169
NmeAIII GCCGAG 1 cut(s) 737
NmuCI GTSAC 2 cut(s) 275, 1523
NspI RCATGY 2 cut(s) 683, 1289
OliI CACNNNNGTG 1 cut(s) 273
PaeR7I CTCGAG 2 cut(s) 503, 526
PagI TCATGA 2 cut(s) 408, 510
PciI ACATGT 1 cut(s) 1285
PctI GAATGC 1 cut(s) 721
PfeI GAWTC 3 cut(s) 53, 197, 826
PflFI GACNNNGTC 1 cut(s) 302
Ppu21I YACGTR 1 cut(s) 1528
PpuMI RGGWCCY 1 cut(s) 1399
PscI ACATGT 1 cut(s) 1285
PshAI GACNNNNGTC 1 cut(s) 1286
Psp124BI GAGCTC 1 cut(s) 913
Psp5II RGGWCCY 1 cut(s) 1399
PspN4I GGNNCC 1 cut(s) 169
PspPI GGNCC 3 cut(s) 449, 1265, 1399
PspPPI RGGWCCY 1 cut(s) 1399
PspXI VCTCGAGB 1 cut(s) 526
PstI CTGCAG 1 cut(s) 1720
PstNI CAGNNNCTG 2 cut(s) 113, 1351
PsuI RGATCY 2 cut(s) 1084, 1664
PsyI GACNNNGTC 1 cut(s) 302
PvuII CAGCTG 2 cut(s) 1351, 1492
RsaI GTAC 5 cut(s) 143, 687, 1043, 1334, 1373
RsaNI GTAC 5 cut(s) 142, 686, 1042, 1333, 1372
RseI CAYNNNNRTG 5 cut(s) 273, 749, 1074, 1188, 1482
SacI GAGCTC 1 cut(s) 913
SaqAI TTAA 8 cut(s) 357, 495, 875, 900, 1097, 1194, 1302, 1724
Sau96I GGNCC 3 cut(s) 449, 1265, 1399
ScaI AGTACT 1 cut(s) 1334
ScrFI CCNGG 1 cut(s) 243
SduI GDGCHC 2 cut(s) 679, 913
SfaNI GCATC 1 cut(s) 283
SfcI CTRYAG 1 cut(s) 1716
Sfr274I CTCGAG 2 cut(s) 503, 526
SinI GGWCC 1 cut(s) 1399
SlaI CTCGAG 2 cut(s) 503, 526
SmiMI CAYNNNNRTG 5 cut(s) 273, 749, 1074, 1188, 1482
SmlI CTYRAG 3 cut(s) 503, 526, 1096
SmoI CTYRAG 3 cut(s) 503, 526, 1096
Sse9I AATT 9 cut(s) 226, 483, 768, 795, 814, 938, 951, 1222, 1721
SsiI CCGC 2 cut(s) 171, 385
SspMI CTAG 5 cut(s) 201, 342, 1214, 1454, 1677
SstI GAGCTC 1 cut(s) 913
StyD4I CCNGG 1 cut(s) 241
StyI CCWWGG 1 cut(s) 1436
TaaI ACNGT 4 cut(s) 16, 1187, 1606, 1708
TaiI ACGT 1 cut(s) 1530
TaqI TCGA 7 cut(s) 504, 527, 764, 1395, 1597, 1647, 1760
TasI AATT 9 cut(s) 226, 483, 768, 795, 814, 938, 951, 1222, 1721
TatI WGTACW 4 cut(s) 141, 1041, 1332, 1371
TauI GCSGC 1 cut(s) 387
TfiI GAWTC 3 cut(s) 53, 197, 826
Tru1I TTAA 8 cut(s) 357, 495, 875, 900, 1097, 1194, 1302, 1724
Tru9I TTAA 8 cut(s) 357, 495, 875, 900, 1097, 1194, 1302, 1724
TscAI CASTG 4 cut(s) 826, 1300, 1548, 1711
TseFI GTSAC 2 cut(s) 275, 1523
Tsp45I GTSAC 2 cut(s) 275, 1523
TspDTI ATGAA 6 cut(s) 54, 449, 527, 584, 1145, 1484
TspGWI ACGGA 1 cut(s) 962
TspRI CASTG 4 cut(s) 826, 1300, 1548, 1711
Tth111I GACNNNGTC 1 cut(s) 302
Vha464I CTTAAG 1 cut(s) 1096
VpaK11BI GGWCC 1 cut(s) 1399
XapI RAATTY 4 cut(s) 226, 814, 938, 1222
XbaI TCTAGA 1 cut(s) 200
XceI RCATGY 2 cut(s) 683, 1289
XcmI CCANNNNNNNNNTGG 1 cut(s) 1098
XhoI CTCGAG 2 cut(s) 503, 526
XspI CTAG 5 cut(s) 201, 342, 1214, 1454, 1677
ZrmI AGTACT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.