Rorug01G0319300
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
43796326 .. 43801159
4834 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0319300.1

Sequence Viewer

Length: 1446 bp
ATGGCTGAAGGAGCGGAAGTTGATGAGCGGGTGGATCTAGATGAGGACAATTACATGGAAGAGATGGATGATGATGTGGAGGAACAAGCAGATGAAGATGGAGCTGATGGAGGCAGTGATGAAAATGTGGAGGAACATGCTGAAGAAGCAGAGGAAGATCCTACAACCGGGGCTAGCGAGAAAGAGCATTCTCCAGAACCATATGGAAGCGAAAACGGTGGTGAGTTGGTGGAAGATGAAGAGAAACCTTCTGCTTCTCTCAGTCAGGAGGAGAAAGAGAAGCATGCTCAACTGCTTGCCCTTCCTCCTTATGGGTCTGAAGTTTTCATTGGTGGCCTTCCTAAAGATGCCTCAGAAGAAGAGTTGAGGGAGCTATGCAGTGAAATAGGCGAAATTCTTGAGATAAGATTAATGCAAGACAGGGAAACTGGTGAGAGCAAAGGTTATGCATTCATAGGATTCAAGTCTAAAGAGGTTGCACAAACGGCTATTGAAGAATTACATAATAAAGCATTTAAGGGTAAGACTTTAAGATGTTCAATTTCCGAAACAAAACATAGACTGTTCATTGGTAATGTTCCAAAAATCTGGACCGAGGATGAGTTTCGAAAAGTTATTGAAGAGGTTGGTCCTGGAGTTGAGCACATTGAGCTGATAAAGGATCCTCAAAATCCAAGTAGAAATCGCGGTTTTGCTTTTGTTTTGTATTACAACAATGCCTGTGCTGATTATTCAAGACAAAAAATGTCAAATTCAAGTTTTAAGCTGGAGGGAAATACCCCAACTGTGACCTGGGCTGATCCAAAAAGTACATCTGATCACTCTGCTGCTGCTCAGGTGAAGGCTCTTTATGTGAAAAACATTCCTGAGAACACTAGCACTGAAACGCTGAAGGAAATATTCCAGCGCCATGGTGAAGTGATAAAAGTAGTTATGCCACCTGGCAAAGGTGGTCAAGGCAAACGGGATTTTGGATTTGTACACTATGCTGAAAGGTCAAGTGCTCTGAAGGCTGTTAAAGATAGTGAGAAATATGAAATTGATGGCCATCCACTAGAGGTTGTTCTTGCGAAGCCTCAGACTGATAAAAAATCTGATGGGGCTTATCCCTACAATGCTGGGCCTCACACAAATCATGCTCCACACCCAGGGTATGGTGGGTTTGCTGGAAATCCATACGGCTCTGCAGGCGCTGGATTTGGTGTTACCCCAGCATTTCAGCAGCCAATGATATATGGTAGAGGGCCAATGCCATCAGGAATGCAGATGGTGCCAATGGTTCTACCAGATGGTCGAATAGGCTATGTTCTTCAGCAGCCTGGGGTACAGATGCCACCTCCTCGGCCTCGAAGAGGGGATCGAAACAATGGTCCGAGTGGACAACCAGGGAGAGGAGGTGGTAGCAGCGATGAAGGCAATCGTGGCAGGAGATACCGGCCTTATTAG
Functional Annotation

Protein Analysis

481

Amino Acids

52.82

Weight (kDa)

4.88

Isoelectric Point (pI)

47.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 108 - 178 2.9e-22 RNA recognition motif
RRM_1 PF00076 188 - 254 1.1e-08 RNA recognition motif
RRM_1 PF00076 283 - 352 1.8e-13 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1270
AccB7I CCANNNNNTGG 1 cut(s) 1154
AccBSI CCGCTC 2 cut(s) 14, 28
AccII CGCG 1 cut(s) 687
AciI CCGC 3 cut(s) 14, 28, 687
AclWI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
AcoI YGGCCR 1 cut(s) 1045
AcsI RAATTY 2 cut(s) 393, 751
AcuI CTGAAG 6 cut(s) 27, 162, 339, 911, 1028, 1295
AfaI GTAC 3 cut(s) 811, 981, 1326
AfiI CCNNNNNNNGG 7 cut(s) 167, 311, 947, 1148, 1154, 1352, 1391
AgsI TTSAA 6 cut(s) 463, 494, 540, 620, 735, 756
AjnI CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
AjuI GAANNNNNNNTTGG 2 cut(s) 312, 344
AluBI AGCT 4 cut(s) 104, 373, 652, 766
AluI AGCT 4 cut(s) 104, 373, 652, 766
Alw21I GWGCWC 2 cut(s) 645, 1006
AlwI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
AlwNI CAGNNNCTG 1 cut(s) 1193
AoxI GGCC 6 cut(s) 334, 1045, 1121, 1244, 1343, 1436
ApeKI GCWGC 5 cut(s) 827, 830, 1222, 1315, 1404
ApoI RAATTY 2 cut(s) 393, 751
ArsI GACNNNNNNTTYG 2 cut(s) 1354, 1386
AseI ATTAAT 1 cut(s) 410
AspLEI GCGC 2 cut(s) 909, 1193
AspS9I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 4 cut(s) 233, 443, 850, 926
AsuII TTCGAA 1 cut(s) 607
AsuNHI GCTAGC 1 cut(s) 173
AvaII GGWCC 3 cut(s) 591, 629, 1370
BalI TGGCCA 1 cut(s) 1047
BamHI GGATCC 1 cut(s) 661
BanI GGYRCC 1 cut(s) 1270
Bbv12I GWGCWC 2 cut(s) 645, 1006
BbvI GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BccI CCATC 9 cut(s) 58, 92, 101, 1037, 1056, 1091, 1261, 1261, 1283
BceAI ACGGC 2 cut(s) 501, 1195
BciT130I CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BclI TGATCA 1 cut(s) 817
BcnI CCSGG 1 cut(s) 169
BfaI CTAG 4 cut(s) 38, 174, 876, 1055
BfmI CTRYAG 1 cut(s) 1185
BfoI RGCGCY 2 cut(s) 910, 1194
BisI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
BlsI GCNGC 5 cut(s) 829, 832, 1224, 1317, 1406
Bme1390I CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
Bme18I GGWCC 3 cut(s) 591, 629, 1370
BmgT120I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
BmiI GGNNCC 2 cut(s) 663, 1272
BmrFI CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
BmsI GCATC 2 cut(s) 337, 1320
BmtI GCTAGC 1 cut(s) 177
BpmI CTGGAG 3 cut(s) 177, 654, 788
Bpu10I CCTNAGC 1 cut(s) 834
Bpu14I TTCGAA 1 cut(s) 607
BpuEI CTTGAG 1 cut(s) 419
BpuMI CCSGG 1 cut(s) 169
BsaBI GATNNNNATC 1 cut(s) 1047
BsaJI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BsaXI ACNNNNNCTCC 3 cut(s) 33, 1381, 1411
Bsc4I CCNNNNNNNGG 7 cut(s) 167, 311, 947, 1148, 1154, 1352, 1391
Bse118I RCCGGY 1 cut(s) 1434
Bse1I ACTGG 1 cut(s) 433
Bse8I GATNNNNATC 1 cut(s) 1047
BseBI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BseDI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BseGI GGATG 3 cut(s) 73, 604, 1048
BseJI GATNNNNATC 1 cut(s) 1047
BseLI CCNNNNNNNGG 7 cut(s) 167, 311, 947, 1148, 1154, 1352, 1391
BseMII CTCAG 5 cut(s) 274, 366, 848, 858, 1091
BseNI ACTGG 1 cut(s) 433
BseRI GAGGAG 3 cut(s) 284, 1329, 1407
BseXI GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BseYI CCCAGC 2 cut(s) 1118, 1210
Bsh1236I CGCG 1 cut(s) 687
BshFI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BshNI GGYRCC 1 cut(s) 1270
BsiHKAI GWGCWC 2 cut(s) 645, 1006
BsiSI CCGG 2 cut(s) 168, 1435
BslI CCNNNNNNNGG 7 cut(s) 167, 311, 947, 1148, 1154, 1352, 1391
BsmI GAATGC 3 cut(s) 187, 449, 1266
BsnI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
Bsp119I TTCGAA 1 cut(s) 607
Bsp1286I GDGCHC 2 cut(s) 645, 1006
Bsp1407I TGTACA 1 cut(s) 979
Bsp143I GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
Bsp19I CCATGG 1 cut(s) 910
BspACI CCGC 3 cut(s) 14, 28, 687
BspANI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BspCNI CTCAG 5 cut(s) 273, 365, 847, 859, 1090
BspFNI CGCG 1 cut(s) 687
BspLI GGNNCC 2 cut(s) 663, 1272
BspMAI CTGCAG 1 cut(s) 1189
BspOI GCTAGC 1 cut(s) 177
BspPI GGATC 6 cut(s) 42, 152, 656, 669, 794, 1365
BspT104I TTCGAA 1 cut(s) 607
BspT107I GGYRCC 1 cut(s) 1270
BsrBI CCGCTC 2 cut(s) 14, 28
BsrFI RCCGGY 1 cut(s) 1434
BsrGI TGTACA 1 cut(s) 979
BsrI ACTGG 1 cut(s) 433
BssAI RCCGGY 1 cut(s) 1434
BssECI CCNNGG 9 cut(s) 168, 594, 792, 910, 1147, 1148, 1319, 1340, 1385
BssMI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
BssT1I CCWWGG 1 cut(s) 910
Bst2UI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
Bst4CI ACNGT 3 cut(s) 218, 564, 787
Bst6I CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
BstAPI GCANNNNNTGC 1 cut(s) 1270
BstAUI TGTACA 1 cut(s) 979
BstBI TTCGAA 1 cut(s) 607
BstC8I GCNNGC 4 cut(s) 175, 285, 297, 1189
BstDEI CTNAG 5 cut(s) 260, 352, 834, 867, 1077
BstDSI CCRYGG 1 cut(s) 910
BstENI CCTNNNNNAGG 2 cut(s) 945, 1350
BstF5I GGATG 3 cut(s) 73, 604, 1048
BstFNI CGCG 1 cut(s) 687
BstH2I RGCGCY 2 cut(s) 910, 1194
BstHHI GCGC 2 cut(s) 909, 1193
BstKTI GATC 6 cut(s) 37, 160, 664, 802, 820, 1360
BstMBI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
BstMWI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
BstNI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
BstNSI RCATGY 2 cut(s) 140, 287
BstSCI CCNGG 7 cut(s) 167, 631, 791, 940, 1147, 1318, 1384
BstSFI CTRYAG 1 cut(s) 1185
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
BstX2I RGATCY 3 cut(s) 34, 157, 661
BstXI CCANNNNNNTGG 2 cut(s) 588, 911
BstYI RGATCY 3 cut(s) 34, 157, 661
BsuRI GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
BtgI CCRYGG 1 cut(s) 910
BtgZI GCGATG 1 cut(s) 1422
BtsCI GGATG 3 cut(s) 73, 604, 1048
BtsI GCAGTG 2 cut(s) 121, 385
BtsIMutI CAGTG 3 cut(s) 121, 385, 879
Cac8I GCNNGC 4 cut(s) 175, 285, 297, 1189
CaiI CAGNNNCTG 1 cut(s) 1193
CfoI GCGC 2 cut(s) 909, 1193
Cfr10I RCCGGY 1 cut(s) 1434
Cfr13I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
Csp6I GTAC 3 cut(s) 810, 980, 1325
CviAII CATG 5 cut(s) 55, 137, 284, 911, 1136
CviQI GTAC 3 cut(s) 810, 980, 1325
DdeI CTNAG 5 cut(s) 260, 352, 834, 867, 1077
DpnI GATC 6 cut(s) 36, 159, 663, 801, 819, 1359
DpnII GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
EaeI YGGCCR 1 cut(s) 1045
Eam1104I CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
EarI CTCTTC 5 cut(s) 54, 234, 354, 615, 1345
Eco130I CCWWGG 1 cut(s) 910
Eco47I GGWCC 3 cut(s) 591, 629, 1370
Eco57I CTGAAG 6 cut(s) 27, 162, 339, 911, 1028, 1295
EcoNI CCTNNNNNAGG 2 cut(s) 945, 1350
EcoRII CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
EcoT14I CCWWGG 1 cut(s) 910
EcoT22I ATGCAT 1 cut(s) 451
ErhI CCWWGG 1 cut(s) 910
FaeI CATG 5 cut(s) 58, 140, 287, 914, 1139
FatI CATG 5 cut(s) 54, 136, 283, 910, 1135
FauI CCCGC 1 cut(s) 21
FauNDI CATATG 1 cut(s) 202
FbaI TGATCA 1 cut(s) 817
Fnu4HI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
FokI GGATG 3 cut(s) 80, 611, 1035
Fsp4HI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
FspBI CTAG 4 cut(s) 38, 174, 876, 1055
GlaI GCGC 2 cut(s) 908, 1192
GluI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
GsaI CCCAGC 2 cut(s) 1122, 1214
GsuI CTGGAG 3 cut(s) 177, 654, 788
HaeII RGCGCY 2 cut(s) 910, 1194
HaeIII GGCC 6 cut(s) 336, 1047, 1123, 1246, 1345, 1438
HapII CCGG 2 cut(s) 168, 1435
HhaI GCGC 2 cut(s) 909, 1193
Hin1II CATG 5 cut(s) 58, 140, 287, 914, 1139
Hin6I GCGC 2 cut(s) 907, 1191
HinP1I GCGC 2 cut(s) 907, 1191
HinfI GANTC 1 cut(s) 459
HpaII CCGG 2 cut(s) 168, 1435
HphI GGTGA 4 cut(s) 233, 443, 850, 926
Hpy166II GTNNAC 2 cut(s) 982, 1379
Hpy188I TCNGA 8 cut(s) 319, 355, 547, 817, 1008, 1080, 1096, 1374
Hpy188III TCNNGA 8 cut(s) 38, 194, 266, 398, 589, 735, 866, 1257
Hpy8I GTNNAC 2 cut(s) 982, 1379
HpyAV CCTTC 7 cut(s) 258, 311, 347, 835, 886, 1003, 1406
HpyCH4III ACNGT 3 cut(s) 218, 564, 787
HpyCH4V TGCA 6 cut(s) 378, 415, 449, 479, 1187, 1264
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
HpyF3I CTNAG 5 cut(s) 260, 352, 834, 867, 1077
Hsp92II CATG 5 cut(s) 58, 140, 287, 914, 1139
HspAI GCGC 2 cut(s) 907, 1191
Ksp22I TGATCA 1 cut(s) 817
Kzo9I GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
LmnI GCTCC 4 cut(s) 11, 101, 370, 1144
Lsp1109I GCAGC 5 cut(s) 814, 817, 1234, 1327, 1416
LweI GCATC 2 cut(s) 337, 1320
MaeI CTAG 4 cut(s) 38, 174, 876, 1055
MaeIII GTNAC 2 cut(s) 787, 1204
MalI GATC 6 cut(s) 36, 159, 663, 801, 819, 1359
MbiI CCGCTC 2 cut(s) 14, 28
MboI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
MflI RGATCY 3 cut(s) 34, 157, 661
MhlI GDGCHC 2 cut(s) 645, 1006
MlsI TGGCCA 1 cut(s) 1047
MluCI AATT 6 cut(s) 49, 393, 497, 540, 751, 1038
MluNI TGGCCA 1 cut(s) 1047
Mox20I TGGCCA 1 cut(s) 1047
Mph1103I ATGCAT 1 cut(s) 451
MscI TGGCCA 1 cut(s) 1047
MseI TTAA 5 cut(s) 410, 516, 530, 762, 1017
Msp20I TGGCCA 1 cut(s) 1047
MspI CCGG 2 cut(s) 168, 1435
MspR9I CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
Mva1269I GAATGC 3 cut(s) 187, 449, 1266
MvaI CCWGG 6 cut(s) 633, 793, 942, 1149, 1320, 1386
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 9 cut(s) 11, 146, 485, 649, 1010, 1188, 1270, 1413, 1422
NciI CCSGG 1 cut(s) 169
NcoI CCATGG 1 cut(s) 910
NdeI CATATG 1 cut(s) 202
NdeII GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
NheI GCTAGC 1 cut(s) 173
NlaIII CATG 5 cut(s) 58, 140, 287, 914, 1139
NlaIV GGNNCC 2 cut(s) 663, 1272
NmeAIII GCCGAG 1 cut(s) 1321
NmuCI GTSAC 1 cut(s) 787
NsiI ATGCAT 1 cut(s) 451
NspI RCATGY 2 cut(s) 140, 287
NspV TTCGAA 1 cut(s) 607
PaeI GCATGC 1 cut(s) 287
PasI CCCWGGG 1 cut(s) 1148
PctI GAATGC 3 cut(s) 187, 449, 1266
PfeI GAWTC 1 cut(s) 459
PflMI CCANNNNNTGG 1 cut(s) 1154
PfoI TCCNGGA 1 cut(s) 631
PkrI GCNGC 5 cut(s) 829, 832, 1224, 1317, 1406
PshBI ATTAAT 1 cut(s) 410
Psp6I CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
PspFI CCCAGC 2 cut(s) 1118, 1210
PspGI CCWGG 6 cut(s) 631, 791, 940, 1147, 1318, 1384
PspN4I GGNNCC 2 cut(s) 663, 1272
PspPI GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
PstI CTGCAG 1 cut(s) 1189
PstNI CAGNNNCTG 1 cut(s) 1193
PsuI RGATCY 3 cut(s) 34, 157, 661
RsaI GTAC 3 cut(s) 811, 981, 1326
RsaNI GTAC 3 cut(s) 810, 980, 1325
SaqAI TTAA 5 cut(s) 410, 516, 530, 762, 1017
SatI GCNGC 5 cut(s) 828, 831, 1223, 1316, 1405
Sau3AI GATC 6 cut(s) 34, 157, 661, 799, 817, 1357
Sau96I GGNCC 5 cut(s) 591, 629, 1121, 1244, 1370
ScrFI CCNGG 7 cut(s) 169, 633, 793, 942, 1149, 1320, 1386
SduI GDGCHC 2 cut(s) 645, 1006
SfaNI GCATC 2 cut(s) 337, 1320
SfcI CTRYAG 1 cut(s) 1185
SfuI TTCGAA 1 cut(s) 607
SinI GGWCC 3 cut(s) 591, 629, 1370
SmlI CTYRAG 1 cut(s) 398
SmoI CTYRAG 1 cut(s) 398
SphI GCATGC 1 cut(s) 287
Sse9I AATT 6 cut(s) 49, 393, 497, 540, 751, 1038
SsiI CCGC 3 cut(s) 14, 28, 687
SspI AATATT 1 cut(s) 900
SspMI CTAG 4 cut(s) 38, 174, 876, 1055
StyD4I CCNGG 7 cut(s) 167, 631, 791, 940, 1147, 1318, 1384
StyI CCWWGG 1 cut(s) 910
TaaI ACNGT 3 cut(s) 218, 564, 787
TaqI TCGA 4 cut(s) 607, 1294, 1348, 1360
TaqII GACCGA 1 cut(s) 608
TasI AATT 6 cut(s) 49, 393, 497, 540, 751, 1038
TatI WGTACW 2 cut(s) 809, 979
TfiI GAWTC 1 cut(s) 459
Tru1I TTAA 5 cut(s) 410, 516, 530, 762, 1017
Tru9I TTAA 5 cut(s) 410, 516, 530, 762, 1017
TscAI CASTG 3 cut(s) 121, 385, 886
TseFI GTSAC 1 cut(s) 787
TseI GCWGC 5 cut(s) 827, 830, 1222, 1315, 1404
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 8 cut(s) 108, 135, 252, 316, 442, 556, 1050, 1425
TspRI CASTG 3 cut(s) 121, 385, 886
Van91I CCANNNNNTGG 1 cut(s) 1154
VpaK11BI GGWCC 3 cut(s) 591, 629, 1370
VspI ATTAAT 1 cut(s) 410
XagI CCTNNNNNAGG 2 cut(s) 945, 1350
XapI RAATTY 2 cut(s) 393, 751
XbaI TCTAGA 1 cut(s) 37
XceI RCATGY 2 cut(s) 140, 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 789
XspI CTAG 4 cut(s) 38, 174, 876, 1055
Zsp2I ATGCAT 1 cut(s) 451
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.