Rw0G023930
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01103
Physical Location & Seq
Reverse (-)
78356 .. 80633
2278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023930.1

Sequence Viewer

Length: 1530 bp
ATGGCAGGATCAGAAAAAGGATATGCAATTGGAATTGATCTCGGGACAACGTACTCTTGCGTGGCAGTGTGGCAGCACGATCATGTAGAAGTCATTGTTAATGATCAAGGAAACAGGACTGCTCCATCTTGTGTTGCCTTCACTGATACTGAACAGTTGGTTGGAGAGGCAGCATTTAACCAGGTCATGAGAAATCCCGTAAACTCTATCTTTGGTAAGGTAATTGGAGGTCCTAGTGATAAGCCTCTGATTGTGGTTACCCACAAAGGCAGGGAGAAACATTTTGCTGCTGAAGAAATCTCATCTATGGTTATTGCAAAGATGCGCGAAATTGCTGAAGCTTACCTTGGATCAACTGTGGATAATGCTGTCATCACTGTCCCTGCTTACTTCAATAACTCTCAACGTGAGGCTACCAAACATGCTGGCGTTAGTGCTGGCCTAAAGGTGATGCGTATTATTAACGAACCAACTGCTGCAGCCATTGCTTATGGCCTTGACAACAAGGCAGGTTGGTATAGCAAGAGAAATGTGCTCATATTTGATTTGGGTGGAGGGACTTTAGATGTGTCGGTACTTACCATAGGGGATGGTGTCTTTGAAGTGAAAGCCACTGCAGGAGATACACACCTTGGAGGTGAAGACTTCGACAACAAAATGGTGAACTATTGTGTCGAGCAATTCCAGAGGAAGCATGATTTGGACGTCAGTGGAAACTCAATAGCTCTTAGAAAGTTAAGAAGTGCCTGTGAAAAGGCAAAGAGAAGACTTTCGTTTACGTCTACAACTGACATTGAAATTGATAGTCTGCATCAAGGTATTGACTTCTATGTAACTTTTACCCGTGCCAAATTTGAACAACTCAACAATGATTTCTTCATGAAGTGTATGGAGCCTGTAAATAAGTGTTTGAGGGATGCTAAAATGGAAATAAGCAGTGTGGATGATGTTGTTCTTGCCGGTGGGTCTTCTCGAATCCCCAAGGTGCAACAACTATTACAGAATGTGTTCATGGGGAAGGAGCTGTGCAAGAGCCTCAACCCTGATGAGGCCATAGCACATGGTGCCGCTGTTCAGGCTGCAGTTTTGAATGGTAAGAATGTTCCTGGGAAACTTCAAGACTTCACTCTATTGGATGTTACCCCTCTGTCACTTGGGGTGGGGAGTGCCAAAGTTTCCAAAGATGGCAGTTTGGAGCTGTTCATGAATGTCTTGATTCCAAGAAACTTGAGAATTCCCCTGAGGAAGGGAGAGATGGTGTTACTACTGTTAGTGACAACCAACCTTTTGTCAGCTTTCCCATTTATGAGGGTGAGTAGAATACCCAAAGATAATAACTTTTTGGGTAAGCTTAAGCTTGATGACATTGGTCCAGCTCCCAGCGGTGTTCCCAGAATCTGTATCTGCTTTGATATTGATGCCAATGGTATCCTGAGTATATCAGCCGAGGACATGTCCACTGGCCAAAAGAAAGAGATTACGATCAACAGTGACAGAAGAACCAGTGAAGGAATTGAACCAGTGAAGTAA
Functional Annotation

Protein Analysis

509

Amino Acids

55.35

Weight (kDa)

6.35

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 72 7.9e-23 Hsp70 protein
MreB_Mbl PF06723 10 - 358 5.7e-18 MreB/Mbl protein
HSP70 PF00012 74 - 502 8.2e-147 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 708
Acc36I ACCTGC 1 cut(s) 500
AccB1I GGYRCC 1 cut(s) 1064
AccI GTMKAC 1 cut(s) 782
AccII CGCG 1 cut(s) 327
AciI CCGC 2 cut(s) 1068, 1383
AclWI GGATC 2 cut(s) 16, 358
AcoI YGGCCR 1 cut(s) 1462
AcsI RAATTY 2 cut(s) 851, 1233
AcuI CTGAAG 2 cut(s) 312, 357
AcyI GRCGYC 1 cut(s) 705
AdeI CACNNNGTG 1 cut(s) 1064
AfaI GTAC 2 cut(s) 53, 576
AfiI CCNNNNNNNGG 2 cut(s) 1048, 1246
AflII CTTAAG 1 cut(s) 1352
AflIII ACRYGT 1 cut(s) 1452
AgsI TTSAA 7 cut(s) 394, 602, 797, 857, 1090, 1118, 1517
AjnI CCWGG 2 cut(s) 180, 1105
AjuI GAANNNNNNNTTGG 6 cut(s) 144, 176, 330, 362, 683, 715
AluBI AGCT 8 cut(s) 341, 725, 1024, 1198, 1295, 1351, 1357, 1376
AluI AGCT 8 cut(s) 341, 725, 1024, 1198, 1295, 1351, 1357, 1376
Alw21I GWGCWC 1 cut(s) 537
AlwI GGATC 2 cut(s) 16, 358
AlwNI CAGNNNCTG 1 cut(s) 1398
Ama87I CYCGRG 1 cut(s) 41
AoxI GGCC 4 cut(s) 439, 493, 1050, 1462
ApeKI GCWGC 6 cut(s) 73, 170, 287, 476, 479, 1079
ApoI RAATTY 2 cut(s) 851, 1233
Asp700I GAANNNNTTC 2 cut(s) 769, 1007
AspLEI GCGC 1 cut(s) 327
AspS9I GGNCC 2 cut(s) 230, 1370
AsuHPI GGTGA 4 cut(s) 460, 650, 673, 1324
AvaI CYCGRG 1 cut(s) 41
AvaII GGWCC 2 cut(s) 230, 1370
AxyI CCTNAGG 1 cut(s) 1241
BalI TGGCCA 1 cut(s) 1464
BanI GGYRCC 1 cut(s) 1064
BbsI GAAGAC 3 cut(s) 648, 772, 960
Bbv12I GWGCWC 1 cut(s) 537
BbvI GCAGC 6 cut(s) 85, 182, 274, 463, 491, 1066
BccI CCATC 4 cut(s) 133, 584, 1178, 1249
BcgI CGANNNNNNTGC 2 cut(s) 455, 489
BciT130I CCWGG 2 cut(s) 182, 1107
BciVI GTATCC 1 cut(s) 1439
BclI TGATCA 1 cut(s) 103
BfaI CTAG 1 cut(s) 234
BfmI CTRYAG 3 cut(s) 477, 615, 1080
BfrI CTTAAG 1 cut(s) 1352
BfuAI ACCTGC 1 cut(s) 500
BfuI GTATCC 1 cut(s) 1439
BisI GCNGC 7 cut(s) 74, 171, 288, 477, 480, 1068, 1080
BlsI GCNGC 7 cut(s) 75, 172, 289, 478, 481, 1069, 1081
Bme1390I CCNGG 2 cut(s) 182, 1107
Bme18I GGWCC 2 cut(s) 230, 1370
BmeT110I CYCGRG 1 cut(s) 41
BmgT120I GGNCC 2 cut(s) 230, 1370
BmiI GGNNCC 2 cut(s) 894, 1066
BmrFI CCNGG 2 cut(s) 182, 1107
BmsI GCATC 5 cut(s) 312, 441, 820, 907, 1408
BoxI GACNNNNGTC 1 cut(s) 1368
BpiI GAAGAC 3 cut(s) 648, 772, 960
BpuEI CTTGAG 1 cut(s) 1249
BsaBI GATNNNNATC 1 cut(s) 1481
BsaHI GRCGYC 1 cut(s) 705
BsaJI CCNNGG 5 cut(s) 346, 631, 981, 1106, 1446
BsaXI ACNNNNNCTCC 2 cut(s) 1242, 1272
Bsc4I CCNNNNNNNGG 2 cut(s) 1048, 1246
Bse118I RCCGGY 1 cut(s) 959
Bse1I ACTGG 3 cut(s) 1465, 1503, 1520
Bse21I CCTNAGG 1 cut(s) 1241
Bse3DI GCAATG 1 cut(s) 483
Bse8I GATNNNNATC 1 cut(s) 1481
BseBI CCWGG 2 cut(s) 182, 1107
BseDI CCNNGG 5 cut(s) 346, 631, 981, 1106, 1446
BseGI GGATG 4 cut(s) 595, 922, 949, 1141
BseJI GATNNNNATC 1 cut(s) 1481
BseLI CCNNNNNNNGG 2 cut(s) 1048, 1246
BseMI GCAATG 1 cut(s) 483
BseMII CTCAG 2 cut(s) 1232, 1424
BseNI ACTGG 3 cut(s) 1465, 1503, 1520
BseXI GCAGC 6 cut(s) 85, 182, 274, 463, 491, 1066
BseYI CCCAGC 1 cut(s) 1379
Bsh1236I CGCG 1 cut(s) 327
BshFI GGCC 4 cut(s) 441, 495, 1052, 1464
BshNI GGYRCC 1 cut(s) 1064
BsiHKAI GWGCWC 1 cut(s) 537
BsiHKCI CYCGRG 1 cut(s) 41
BsiSI CCGG 1 cut(s) 960
BslFI GGGAC 3 cut(s) 58, 365, 571
BslI CCNNNNNNNGG 2 cut(s) 1048, 1246
BsmFI GGGAC 3 cut(s) 58, 365, 571
BsnI GGCC 4 cut(s) 441, 495, 1052, 1464
BsoBI CYCGRG 1 cut(s) 41
Bsp1286I GDGCHC 1 cut(s) 537
Bsp143I GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
BspACI CCGC 2 cut(s) 1068, 1383
BspANI GGCC 4 cut(s) 441, 495, 1052, 1464
BspCNI CTCAG 2 cut(s) 1233, 1425
BspFNI CGCG 1 cut(s) 327
BspHI TCATGA 3 cut(s) 186, 879, 1203
BspLI GGNNCC 2 cut(s) 894, 1066
BspMAI CTGCAG 3 cut(s) 481, 619, 1084
BspMI ACCTGC 1 cut(s) 500
BspPI GGATC 2 cut(s) 16, 358
BspT107I GGYRCC 1 cut(s) 1064
BspTI CTTAAG 1 cut(s) 1352
BsrDI GCAATG 1 cut(s) 483
BsrFI RCCGGY 1 cut(s) 959
BsrI ACTGG 3 cut(s) 1465, 1503, 1520
BssAI RCCGGY 1 cut(s) 959
BssECI CCNNGG 5 cut(s) 346, 631, 981, 1106, 1446
BssMI GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
BssNI GRCGYC 1 cut(s) 705
BssT1I CCWWGG 3 cut(s) 346, 631, 981
Bst2UI CCWGG 2 cut(s) 182, 1107
Bst4CI ACNGT 5 cut(s) 156, 358, 379, 1269, 1490
BstACI GRCGYC 1 cut(s) 705
BstAFI CTTAAG 1 cut(s) 1352
BstAPI GCANNNNNTGC 2 cut(s) 485, 1064
BstC8I GCNNGC 2 cut(s) 427, 439
BstDEI CTNAG 3 cut(s) 728, 1241, 1433
BstEII GGTNACC 1 cut(s) 256
BstENI CCTNNNNNAGG 1 cut(s) 1244
BstF5I GGATG 4 cut(s) 595, 922, 949, 1141
BstFNI CGCG 1 cut(s) 327
BstHHI GCGC 1 cut(s) 327
BstKTI GATC 6 cut(s) 11, 40, 82, 106, 353, 1485
BstMBI GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
BstMWI GCNNNNNNNGC 3 cut(s) 485, 1064, 1076
BstNI CCWGG 2 cut(s) 182, 1107
BstNSI RCATGY 2 cut(s) 425, 1456
BstPAI GACNNNNGTC 1 cut(s) 1368
BstPI GGTNACC 1 cut(s) 256
BstSCI CCNGG 2 cut(s) 180, 1105
BstSFI CTRYAG 3 cut(s) 477, 615, 1080
BstUI CGCG 1 cut(s) 327
BstV1I GCAGC 6 cut(s) 85, 182, 274, 463, 491, 1066
BstV2I GAAGAC 3 cut(s) 648, 772, 960
Bsu36I CCTNAGG 1 cut(s) 1241
BsuI GTATCC 1 cut(s) 1439
BsuRI GGCC 4 cut(s) 441, 495, 1052, 1464
BtsCI GGATG 4 cut(s) 595, 922, 949, 1141
BtsI GCAGTG 3 cut(s) 72, 612, 943
BveI ACCTGC 1 cut(s) 500
Cac8I GCNNGC 2 cut(s) 427, 439
CaiI CAGNNNCTG 1 cut(s) 1398
CciI TCATGA 3 cut(s) 186, 879, 1203
CfoI GCGC 1 cut(s) 327
Cfr10I RCCGGY 1 cut(s) 959
Cfr13I GGNCC 2 cut(s) 230, 1370
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 2 cut(s) 52, 575
CviAII CATG 9 cut(s) 83, 187, 422, 695, 880, 1012, 1061, 1204, 1453
CviQI GTAC 2 cut(s) 52, 575
DdeI CTNAG 3 cut(s) 728, 1241, 1433
DpnI GATC 6 cut(s) 10, 39, 81, 105, 352, 1484
DpnII GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
DraIII CACNNNGTG 1 cut(s) 1064
EaeI YGGCCR 1 cut(s) 1462
Eco130I CCWWGG 3 cut(s) 346, 631, 981
Eco47I GGWCC 2 cut(s) 230, 1370
Eco57I CTGAAG 2 cut(s) 312, 357
Eco81I CCTNAGG 1 cut(s) 1241
Eco88I CYCGRG 1 cut(s) 41
Eco91I GGTNACC 1 cut(s) 256
EcoNI CCTNNNNNAGG 1 cut(s) 1244
EcoO109I RGGNCCY 1 cut(s) 230
EcoO65I GGTNACC 1 cut(s) 256
EcoRI GAATTC 1 cut(s) 1233
EcoRII CCWGG 2 cut(s) 180, 1105
EcoT14I CCWWGG 3 cut(s) 346, 631, 981
ErhI CCWWGG 3 cut(s) 346, 631, 981
FaeI CATG 9 cut(s) 86, 190, 425, 698, 883, 1015, 1064, 1207, 1456
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 3 cut(s) 58, 365, 571
FatI CATG 9 cut(s) 82, 186, 421, 694, 879, 1011, 1060, 1203, 1452
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 1 cut(s) 782
Fnu4HI GCNGC 7 cut(s) 74, 171, 288, 477, 480, 1068, 1080
FokI GGATG 4 cut(s) 602, 929, 956, 1148
Fsp4HI GCNGC 7 cut(s) 74, 171, 288, 477, 480, 1068, 1080
FspBI CTAG 1 cut(s) 234
GlaI GCGC 1 cut(s) 326
GluI GCNGC 7 cut(s) 74, 171, 288, 477, 480, 1068, 1080
GsaI CCCAGC 1 cut(s) 1383
HaeIII GGCC 4 cut(s) 441, 495, 1052, 1464
HapII CCGG 1 cut(s) 960
HhaI GCGC 1 cut(s) 327
Hin1I GRCGYC 1 cut(s) 705
Hin1II CATG 9 cut(s) 86, 190, 425, 698, 883, 1015, 1064, 1207, 1456
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HindIII AAGCTT 3 cut(s) 339, 1349, 1355
HinfI GANTC 3 cut(s) 975, 1216, 1395
HpaII CCGG 1 cut(s) 960
HphI GGTGA 4 cut(s) 460, 650, 673, 1324
Hpy166II GTNNAC 5 cut(s) 202, 664, 777, 783, 1458
Hpy188I TCNGA 2 cut(s) 13, 249
Hpy188III TCNNGA 9 cut(s) 43, 187, 685, 880, 972, 1118, 1204, 1213, 1432
Hpy8I GTNNAC 5 cut(s) 202, 664, 777, 783, 1458
HpyAV CCTTC 4 cut(s) 148, 1012, 1240, 1502
HpyCH4III ACNGT 5 cut(s) 156, 358, 379, 1269, 1490
HpyCH4IV ACGT 4 cut(s) 50, 406, 705, 779
HpyCH4V TGCA 8 cut(s) 26, 317, 479, 617, 811, 988, 1029, 1082
HpyF10VI GCNNNNNNNGC 3 cut(s) 485, 1064, 1076
HpyF3I CTNAG 3 cut(s) 728, 1241, 1433
HpySE526I ACGT 4 cut(s) 50, 406, 705, 779
Hsp92I GRCGYC 1 cut(s) 705
Hsp92II CATG 9 cut(s) 86, 190, 425, 698, 883, 1015, 1064, 1207, 1456
HspAI GCGC 1 cut(s) 325
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
LmnI GCTCC 5 cut(s) 127, 892, 1021, 1195, 1381
Lsp1109I GCAGC 6 cut(s) 85, 182, 274, 463, 491, 1066
LweI GCATC 5 cut(s) 312, 441, 820, 907, 1408
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 1 cut(s) 234
MaeII ACGT 4 cut(s) 50, 406, 705, 779
MaeIII GTNAC 7 cut(s) 256, 832, 1138, 1149, 1260, 1273, 1490
MalI GATC 6 cut(s) 10, 39, 81, 105, 352, 1484
MboI GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
MboII GAAGA 6 cut(s) 305, 653, 777, 868, 960, 1509
MfeI CAATTG 1 cut(s) 27
MhlI GDGCHC 1 cut(s) 537
MlsI TGGCCA 1 cut(s) 1464
MluCI AATT 9 cut(s) 27, 33, 222, 330, 680, 798, 851, 1233, 1512
MluNI TGGCCA 1 cut(s) 1464
MmeI TCCRAC 1 cut(s) 142
Mox20I TGGCCA 1 cut(s) 1464
MroXI GAANNNNTTC 2 cut(s) 769, 1007
MscI TGGCCA 1 cut(s) 1464
MseI TTAA 5 cut(s) 99, 177, 462, 737, 1353
MslI CAYNNNNRTG 1 cut(s) 81
Msp20I TGGCCA 1 cut(s) 1464
MspA1I CMGCKG 2 cut(s) 1070, 1383
MspCI CTTAAG 1 cut(s) 1352
MspI CCGG 1 cut(s) 960
MspR9I CCNGG 2 cut(s) 182, 1107
MunI CAATTG 1 cut(s) 27
MvaI CCWGG 2 cut(s) 182, 1107
MvnI CGCG 1 cut(s) 327
MwoI GCNNNNNNNGC 3 cut(s) 485, 1064, 1076
NdeII GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
NlaIII CATG 9 cut(s) 86, 190, 425, 698, 883, 1015, 1064, 1207, 1456
NlaIV GGNNCC 2 cut(s) 894, 1066
NmeAIII GCCGAG 1 cut(s) 1471
NmuCI GTSAC 3 cut(s) 1149, 1273, 1490
NspI RCATGY 2 cut(s) 425, 1456
PagI TCATGA 3 cut(s) 186, 879, 1203
PciI ACATGT 1 cut(s) 1452
PdmI GAANNNNTTC 2 cut(s) 769, 1007
PfeI GAWTC 3 cut(s) 975, 1216, 1395
PkrI GCNGC 7 cut(s) 75, 172, 289, 478, 481, 1069, 1081
PpuMI RGGWCCY 1 cut(s) 230
PscI ACATGT 1 cut(s) 1452
PshAI GACNNNNGTC 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 230
Psp6I CCWGG 2 cut(s) 180, 1105
PspEI GGTNACC 1 cut(s) 256
PspFI CCCAGC 1 cut(s) 1379
PspGI CCWGG 2 cut(s) 180, 1105
PspN4I GGNNCC 2 cut(s) 894, 1066
PspPI GGNCC 2 cut(s) 230, 1370
PspPPI RGGWCCY 1 cut(s) 230
PstI CTGCAG 3 cut(s) 481, 619, 1084
PstNI CAGNNNCTG 1 cut(s) 1398
RsaI GTAC 2 cut(s) 53, 576
RsaNI GTAC 2 cut(s) 52, 575
RseI CAYNNNNRTG 1 cut(s) 81
SaqAI TTAA 5 cut(s) 99, 177, 462, 737, 1353
SatI GCNGC 7 cut(s) 74, 171, 288, 477, 480, 1068, 1080
Sau3AI GATC 6 cut(s) 8, 37, 79, 103, 350, 1482
Sau96I GGNCC 2 cut(s) 230, 1370
ScrFI CCNGG 2 cut(s) 182, 1107
SduI GDGCHC 1 cut(s) 537
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 5 cut(s) 312, 441, 820, 907, 1408
SfcI CTRYAG 3 cut(s) 477, 615, 1080
SinI GGWCC 2 cut(s) 230, 1370
SmiMI CAYNNNNRTG 1 cut(s) 81
SmlI CTYRAG 2 cut(s) 1228, 1352
SmoI CTYRAG 2 cut(s) 1228, 1352
Sse9I AATT 9 cut(s) 27, 33, 222, 330, 680, 798, 851, 1233, 1512
SsiI CCGC 2 cut(s) 1068, 1383
SspMI CTAG 1 cut(s) 234
StyD4I CCNGG 2 cut(s) 180, 1105
StyI CCWWGG 3 cut(s) 346, 631, 981
TaaI ACNGT 5 cut(s) 156, 358, 379, 1269, 1490
TaiI ACGT 4 cut(s) 53, 409, 708, 782
TaqI TCGA 3 cut(s) 648, 675, 973
TasI AATT 9 cut(s) 27, 33, 222, 330, 680, 798, 851, 1233, 1512
TauI GCSGC 1 cut(s) 1070
TfiI GAWTC 3 cut(s) 975, 1216, 1395
Tru1I TTAA 5 cut(s) 99, 177, 462, 737, 1353
Tru9I TTAA 5 cut(s) 99, 177, 462, 737, 1353
TseFI GTSAC 3 cut(s) 1149, 1273, 1490
TseI GCWGC 6 cut(s) 73, 170, 287, 476, 479, 1079
Tsp45I GTSAC 3 cut(s) 1149, 1273, 1490
TspDTI ATGAA 5 cut(s) 868, 896, 1000, 1192, 1220
Vha464I CTTAAG 1 cut(s) 1352
VpaK11BI GGWCC 2 cut(s) 230, 1370
XagI CCTNNNNNAGG 1 cut(s) 1244
XapI RAATTY 2 cut(s) 851, 1233
XceI RCATGY 2 cut(s) 425, 1456
XmiI GTMKAC 1 cut(s) 782
XmnI GAANNNNTTC 2 cut(s) 769, 1007
XspI CTAG 1 cut(s) 234
ZraI GACGTC 1 cut(s) 706
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.