MD12G1025800.v1.1
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
2786767 .. 2790563
3797 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1025800.v1.1.491

Sequence Viewer

Length: 1533 bp
ATGACCTTTGCTTGTTTCAGCAATCTATTGAAATTAAAGACGACTAAAGTTCCTGAGTTGAGAATGAGTGGAAAAGAAGGCCACGCAATTGGAATCGATCTGGGGACAACGTATTCTTGTGTAGCAGTGTGGCGATATGATCATATTGAAATTATAGTGAATGGTCAGGGCAACAGAACAACTCCGTCTTATGTTGCTTTCACTGATACTGAAAGGTTAATCGGTGATGCAGCATATAACCAGGTCATTAGAAACCCCTCAAACTCAATCTTTGATGCAAAGCGATTAATTGGAAGGAGATTTGCTGACGCTTCTGTTCAAAATGATTTGAAGCTCTGGCCATTCAAGGTCACTGAAGGTCCTGATCACAAGCCCATGGTTGTGGTTACCCACAAGGGTCAAGAGAAACAGTTTGCTGCTGAAGAAATCTCATCTATGGTTCTCACAAAGATGCGGGAGATTGCTGAGGCCTACCTCGGCTCGGGTGTGAAGAAAGCAGTTATTACTGTCCCTGCTTACTTTACTGACTCACAACGTCAGGCTACAAAATGTGCTGGTGTCACTGCTGGCTTAGAGGTGATGCGAATCATCAATGAACCAACTGCAGCCGCCATTGCTTATGGAATTGACAATAAGGCTGGTTGGTATAGCAAGAGAAATGTTATGATATTTGACTTGGGTGGTGGTACTTTAGATGTGTCACTGCTTACCATAAGTTCTGGTGACTTTGAAGTAAAGGCGACAGCTGGAAATACTCACCTTGGTGGTGAAGATTTTGATAACAATATGGTGAATCACTGTGTCGAGAAGTTTAAGAAGAAGCATAGTTTGGACGTCAGTGGAAACCCTAGAGCTCTTAGGAGGTTAAAAAATGAATGTGAGAAGGCGAAGAGGAGACTTTCGTTTACGTCTGCGACAGATATTGAAATTGACTGTTTGTATCAGGGTTGCATGGAGCCTGTGGAGAAATGTTTGGAGGATGCCAAAATGGACACAAGCGATGTCGATGATGTTGTTCTAGTTGGCGGCTCCTCTAGAATTCCCAAGGTACAGGAGCTATTACACAACGTGTTCATCGGCAAGGAGCTGTCCAATGGCATTAATCCGGATGAGGCTGTGGCATATGGTGCTGCTGTTCAAGCTGCTGTCTTGAATGGTAATCAAAGTTTGAAGCTTCAAGACTTCACTCTCTTCGATGTCATTCCTATGTCACTTGGGACAGAGTATGGTGACGAACAGCTCATGCATGTTATGATCCCAAGAAACACCAAAATTCCCACCAAGAAGAACCATACTTTTGTAACTGGTTACGACAACCAAAGTTCTGTCCCCTGTGGAGTTTACGAGGGTGAGAATGAGCTAACCAAAGATAATAATTATTTGGGTGGATTTTACATCGGTGACATTCCTCCAGCTCCTAAGGGTGTTTCTGAAGTAGATGTTTGCTTTTCTATTGATGAAAATGGAATCCTGAATGTTTCTGCTGAGGTCGTGTCCACCGGCCAGAAGAAAGAGATTGCAATCAAAAGATGA
Functional Annotation

Protein Analysis

511

Amino Acids

55.9

Weight (kDa)

5.79

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 29 - 312 6.2e-126 Hsp70 protein
MreB_Mbl PF06723 163 - 272 2.2e-10 MreB/Mbl protein
HSP70 PF00012 313 - 509 1.2e-65 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 837
AccIII TCCGGA 1 cut(s) 1105
AciI CCGC 3 cut(s) 454, 609, 1026
AclWI GGATC 1 cut(s) 1249
AcoI YGGCCR 2 cut(s) 338, 1501
AcsI RAATTY 2 cut(s) 1038, 1272
AcuI CTGAAG 3 cut(s) 375, 441, 1452
AcyI GRCGYC 1 cut(s) 834
AdeI CACNNNGTG 1 cut(s) 1069
AfaI GTAC 2 cut(s) 688, 1050
AfiI CCNNNNNNNGG 1 cut(s) 481
AflIII ACRYGT 1 cut(s) 1068
AjnI CCWGG 1 cut(s) 240
AjuI GAANNNNNNNTTGG 2 cut(s) 812, 844
AleI CACNNNNGTG 1 cut(s) 762
Alw21I GWGCWC 1 cut(s) 856
Alw26I GTCTC 1 cut(s) 889
AlwI GGATC 1 cut(s) 1249
Ama87I CYCGRG 1 cut(s) 481
Aor13HI TCCGGA 1 cut(s) 1105
AoxI GGCC 4 cut(s) 79, 338, 468, 1501
ApeKI GCWGC 5 cut(s) 230, 416, 605, 1130, 1142
ApoI RAATTY 2 cut(s) 1038, 1272
AseI ATTAAT 2 cut(s) 287, 1101
AspS9I GGNCC 1 cut(s) 359
AsuHPI GGTGA 9 cut(s) 236, 589, 734, 749, 779, 802, 1241, 1361, 1412
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 1 cut(s) 359
AxyI CCTNAGG 1 cut(s) 1419
BalI TGGCCA 1 cut(s) 340
BanII GRGCYC 1 cut(s) 856
Bbv12I GWGCWC 1 cut(s) 856
BbvCI CCTCAGC 2 cut(s) 465, 1485
BbvI GCAGC 5 cut(s) 242, 403, 617, 1117, 1129
BciT130I CCWGG 1 cut(s) 242
BclI TGATCA 2 cut(s) 139, 364
BcoDI GTCTC 1 cut(s) 889
BfaI CTAG 3 cut(s) 849, 1019, 1035
BfmI CTRYAG 1 cut(s) 603
BisI GCNGC 7 cut(s) 231, 417, 606, 609, 1027, 1131, 1143
BlsI GCNGC 7 cut(s) 232, 418, 607, 610, 1028, 1132, 1144
Bme1390I CCNGG 1 cut(s) 242
Bme18I GGWCC 1 cut(s) 359
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 1 cut(s) 359
BmiI GGNNCC 2 cut(s) 957, 1030
BmrFI CCNGG 1 cut(s) 242
BmsI GCATC 5 cut(s) 217, 265, 441, 570, 970
BpmI CTGGAG 1 cut(s) 1395
Bpu10I CCTNAGC 2 cut(s) 465, 1485
Bsa29I ATCGAT 1 cut(s) 96
BsaBI GATNNNNATC 2 cut(s) 584, 1520
BsaHI GRCGYC 1 cut(s) 834
BsaJI CCNNGG 4 cut(s) 375, 475, 760, 1044
BsaWI WCCGGW 1 cut(s) 1105
Bsc4I CCNNNNNNNGG 1 cut(s) 481
Bse118I RCCGGY 1 cut(s) 1499
Bse1I ACTGG 1 cut(s) 1309
Bse21I CCTNAGG 1 cut(s) 1419
Bse3DI GCAATG 1 cut(s) 612
Bse8I GATNNNNATC 2 cut(s) 584, 1520
BseAI TCCGGA 1 cut(s) 1105
BseBI CCWGG 1 cut(s) 242
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 4 cut(s) 375, 475, 760, 1044
BseGI GGATG 2 cut(s) 985, 1114
BseJI GATNNNNATC 2 cut(s) 584, 1520
BseLI CCNNNNNNNGG 1 cut(s) 481
BseMI GCAATG 1 cut(s) 612
BseMII CTCAG 3 cut(s) 45, 456, 1476
BseNI ACTGG 1 cut(s) 1309
BseRI GAGGAG 2 cut(s) 907, 1021
BseXI GCAGC 5 cut(s) 242, 403, 617, 1117, 1129
BshFI GGCC 4 cut(s) 81, 340, 470, 1503
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 1 cut(s) 856
BsiHKCI CYCGRG 1 cut(s) 481
BsiSI CCGG 2 cut(s) 1106, 1500
BslFI GGGAC 4 cut(s) 118, 494, 1231, 1313
BslI CCNNNNNNNGG 1 cut(s) 481
BsmAI GTCTC 1 cut(s) 889
BsmFI GGGAC 4 cut(s) 118, 494, 1231, 1313
BsnI GGCC 4 cut(s) 81, 340, 470, 1503
BsoBI CYCGRG 1 cut(s) 481
Bsp1286I GDGCHC 1 cut(s) 856
Bsp13I TCCGGA 1 cut(s) 1105
Bsp143I GATC 4 cut(s) 97, 139, 364, 1254
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 3 cut(s) 454, 609, 1026
BspANI GGCC 4 cut(s) 81, 340, 470, 1503
BspCNI CTCAG 3 cut(s) 46, 457, 1477
BspDI ATCGAT 1 cut(s) 96
BspEI TCCGGA 1 cut(s) 1105
BspLI GGNNCC 2 cut(s) 957, 1030
BspMAI CTGCAG 1 cut(s) 607
BspPI GGATC 1 cut(s) 1249
BsrDI GCAATG 1 cut(s) 612
BsrFI RCCGGY 1 cut(s) 1499
BsrI ACTGG 1 cut(s) 1309
BssAI RCCGGY 1 cut(s) 1499
BssECI CCNNGG 4 cut(s) 375, 475, 760, 1044
BssMI GATC 4 cut(s) 97, 139, 364, 1254
BssNI GRCGYC 1 cut(s) 834
BssT1I CCWWGG 3 cut(s) 375, 760, 1044
Bst2UI CCWGG 1 cut(s) 242
Bst4CI ACNGT 4 cut(s) 411, 508, 800, 935
Bst6I CTCTTC 2 cut(s) 884, 1196
BstACI GRCGYC 1 cut(s) 834
BstAPI GCANNNNNTGC 1 cut(s) 1127
BstC8I GCNNGC 1 cut(s) 568
BstDEI CTNAG 6 cut(s) 54, 465, 571, 857, 1419, 1485
BstDSI CCRYGG 1 cut(s) 375
BstEII GGTNACC 1 cut(s) 385
BstF5I GGATG 2 cut(s) 985, 1114
BstKTI GATC 4 cut(s) 100, 142, 367, 1257
BstMAI GTCTC 1 cut(s) 889
BstMBI GATC 4 cut(s) 97, 139, 364, 1254
BstMWI GCNNNNNNNGC 3 cut(s) 614, 1127, 1139
BstNI CCWGG 1 cut(s) 242
BstNSI RCATGY 1 cut(s) 1250
BstPI GGTNACC 1 cut(s) 385
BstSCI CCNGG 1 cut(s) 240
BstSFI CTRYAG 1 cut(s) 603
BstV1I GCAGC 5 cut(s) 242, 403, 617, 1117, 1129
BstXI CCANNNNNNTGG 2 cut(s) 89, 382
Bsu15I ATCGAT 1 cut(s) 96
Bsu36I CCTNAGG 1 cut(s) 1419
BsuRI GGCC 4 cut(s) 81, 340, 470, 1503
BsuTUI ATCGAT 1 cut(s) 96
BtgI CCRYGG 1 cut(s) 375
BtgZI GCGATG 1 cut(s) 1014
BtsCI GGATG 2 cut(s) 985, 1114
BtsI GCAGTG 3 cut(s) 132, 561, 701
BtsIMutI CAGTG 7 cut(s) 132, 201, 351, 561, 701, 796, 844
Cac8I GCNNGC 1 cut(s) 568
Cfr10I RCCGGY 1 cut(s) 1499
Cfr13I GGNCC 1 cut(s) 359
ClaI ATCGAT 1 cut(s) 96
CseI GACGC 1 cut(s) 317
CsiI ACCWGGT 1 cut(s) 240
Csp6I GTAC 2 cut(s) 687, 1049
CviAII CATG 4 cut(s) 376, 952, 1243, 1247
CviQI GTAC 2 cut(s) 687, 1049
DdeI CTNAG 6 cut(s) 54, 465, 571, 857, 1419, 1485
DpnI GATC 4 cut(s) 99, 141, 366, 1256
DpnII GATC 4 cut(s) 97, 139, 364, 1254
DraIII CACNNNGTG 1 cut(s) 1069
EaeI YGGCCR 2 cut(s) 338, 1501
Eam1104I CTCTTC 2 cut(s) 884, 1196
EarI CTCTTC 2 cut(s) 884, 1196
Ecl136II GAGCTC 1 cut(s) 854
Eco130I CCWWGG 3 cut(s) 375, 760, 1044
Eco147I AGGCCT 1 cut(s) 470
Eco24I GRGCYC 1 cut(s) 856
Eco47I GGWCC 1 cut(s) 359
Eco53kI GAGCTC 1 cut(s) 854
Eco57I CTGAAG 3 cut(s) 375, 441, 1452
Eco81I CCTNAGG 1 cut(s) 1419
Eco88I CYCGRG 1 cut(s) 481
Eco91I GGTNACC 1 cut(s) 385
EcoICRI GAGCTC 1 cut(s) 854
EcoO109I RGGNCCY 1 cut(s) 359
EcoO65I GGTNACC 1 cut(s) 385
EcoRI GAATTC 1 cut(s) 1038
EcoRII CCWGG 1 cut(s) 240
EcoT14I CCWWGG 3 cut(s) 375, 760, 1044
EcoT22I ATGCAT 1 cut(s) 1248
EcoT38I GRGCYC 1 cut(s) 856
ErhI CCWWGG 3 cut(s) 375, 760, 1044
FaeI CATG 4 cut(s) 379, 955, 1246, 1250
FaqI GGGAC 4 cut(s) 118, 494, 1231, 1313
FatI CATG 4 cut(s) 375, 951, 1242, 1246
FauI CCCGC 1 cut(s) 447
FauNDI CATATG 1 cut(s) 1123
FbaI TGATCA 2 cut(s) 139, 364
Fnu4HI GCNGC 7 cut(s) 231, 417, 606, 609, 1027, 1131, 1143
FokI GGATG 2 cut(s) 992, 1121
FriOI GRGCYC 1 cut(s) 856
Fsp4HI GCNGC 7 cut(s) 231, 417, 606, 609, 1027, 1131, 1143
FspBI CTAG 3 cut(s) 849, 1019, 1035
GluI GCNGC 7 cut(s) 231, 417, 606, 609, 1027, 1131, 1143
GsuI CTGGAG 1 cut(s) 1395
HaeIII GGCC 4 cut(s) 81, 340, 470, 1503
HapII CCGG 2 cut(s) 1106, 1500
HgaI GACGC 1 cut(s) 317
Hin1I GRCGYC 1 cut(s) 834
Hin1II CATG 4 cut(s) 379, 955, 1246, 1250
HindIII AAGCTT 1 cut(s) 1172
HinfI GANTC 5 cut(s) 93, 527, 585, 793, 1467
HpaII CCGG 2 cut(s) 1106, 1500
HphI GGTGA 9 cut(s) 236, 589, 734, 749, 779, 802, 1241, 1361, 1412
Hpy166II GTNNAC 3 cut(s) 906, 1342, 1497
Hpy188I TCNGA 1 cut(s) 1432
Hpy188III TCNNGA 9 cut(s) 53, 362, 401, 805, 1035, 1106, 1150, 1178, 1471
Hpy8I GTNNAC 3 cut(s) 906, 1342, 1497
HpyAV CCTTC 4 cut(s) 71, 288, 350, 877
HpyCH4III ACNGT 4 cut(s) 411, 508, 800, 935
HpyCH4IV ACGT 5 cut(s) 110, 535, 834, 908, 1068
HpyCH4V TGCA 6 cut(s) 230, 278, 605, 951, 1246, 1520
HpyF10VI GCNNNNNNNGC 3 cut(s) 614, 1127, 1139
HpyF3I CTNAG 6 cut(s) 54, 465, 571, 857, 1419, 1485
HpySE526I ACGT 5 cut(s) 110, 535, 834, 908, 1068
Hsp92I GRCGYC 1 cut(s) 834
Hsp92II CATG 4 cut(s) 379, 955, 1246, 1250
Kpn2I TCCGGA 1 cut(s) 1105
Ksp22I TGATCA 2 cut(s) 139, 364
Kzo9I GATC 4 cut(s) 97, 139, 364, 1254
LmnI GCTCC 5 cut(s) 955, 1034, 1054, 1084, 1420
Lsp1109I GCAGC 5 cut(s) 242, 403, 617, 1117, 1129
LweI GCATC 5 cut(s) 217, 265, 441, 570, 970
MabI ACCWGGT 1 cut(s) 240
MaeI CTAG 3 cut(s) 849, 1019, 1035
MaeII ACGT 5 cut(s) 110, 535, 834, 908, 1068
MalI GATC 4 cut(s) 99, 141, 366, 1256
MboI GATC 4 cut(s) 97, 139, 364, 1254
MboII GAAGA 8 cut(s) 434, 502, 782, 829, 901, 1183, 1297, 1519
MfeI CAATTG 1 cut(s) 87
MhlI GDGCHC 1 cut(s) 856
MlsI TGGCCA 1 cut(s) 340
MluCI AATT 9 cut(s) 32, 87, 150, 288, 624, 927, 1038, 1272, 1375
MluNI TGGCCA 1 cut(s) 340
MlyI GAGTC 1 cut(s) 521
Mox20I TGGCCA 1 cut(s) 340
Mph1103I ATGCAT 1 cut(s) 1248
MroI TCCGGA 1 cut(s) 1105
MscI TGGCCA 1 cut(s) 340
MseI TTAA 6 cut(s) 35, 218, 287, 813, 866, 1101
MslI CAYNNNNRTG 4 cut(s) 380, 449, 762, 1205
Msp20I TGGCCA 1 cut(s) 340
MspA1I CMGCKG 1 cut(s) 746
MspI CCGG 2 cut(s) 1106, 1500
MspR9I CCNGG 1 cut(s) 242
MunI CAATTG 1 cut(s) 87
MvaI CCWGG 1 cut(s) 242
MwoI GCNNNNNNNGC 3 cut(s) 614, 1127, 1139
NcoI CCATGG 1 cut(s) 375
NdeI CATATG 1 cut(s) 1123
NdeII GATC 4 cut(s) 97, 139, 364, 1254
NlaIII CATG 4 cut(s) 379, 955, 1246, 1250
NlaIV GGNNCC 2 cut(s) 957, 1030
NmeAIII GCCGAG 1 cut(s) 456
NmuCI GTSAC 7 cut(s) 349, 559, 699, 722, 1209, 1229, 1400
NsiI ATGCAT 1 cut(s) 1248
NspI RCATGY 1 cut(s) 1250
OliI CACNNNNGTG 1 cut(s) 762
PceI AGGCCT 1 cut(s) 470
PfeI GAWTC 4 cut(s) 93, 585, 793, 1467
PkrI GCNGC 7 cut(s) 232, 418, 607, 610, 1028, 1132, 1144
PleI GAGTC 1 cut(s) 521
PpsI GAGTC 1 cut(s) 521
PpuMI RGGWCCY 1 cut(s) 359
PshBI ATTAAT 2 cut(s) 287, 1101
Psp124BI GAGCTC 1 cut(s) 856
Psp5II RGGWCCY 1 cut(s) 359
Psp6I CCWGG 1 cut(s) 240
PspEI GGTNACC 1 cut(s) 385
PspGI CCWGG 1 cut(s) 240
PspN4I GGNNCC 2 cut(s) 957, 1030
PspPI GGNCC 1 cut(s) 359
PspPPI RGGWCCY 1 cut(s) 359
PstI CTGCAG 1 cut(s) 607
PvuII CAGCTG 1 cut(s) 746
RsaI GTAC 2 cut(s) 688, 1050
RsaNI GTAC 2 cut(s) 687, 1049
RseI CAYNNNNRTG 4 cut(s) 380, 449, 762, 1205
SacI GAGCTC 1 cut(s) 856
SaqAI TTAA 6 cut(s) 35, 218, 287, 813, 866, 1101
SatI GCNGC 7 cut(s) 231, 417, 606, 609, 1027, 1131, 1143
Sau3AI GATC 4 cut(s) 97, 139, 364, 1254
Sau96I GGNCC 1 cut(s) 359
SchI GAGTC 1 cut(s) 521
ScrFI CCNGG 1 cut(s) 242
SduI GDGCHC 1 cut(s) 856
SexAI ACCWGGT 1 cut(s) 240
SfaNI GCATC 5 cut(s) 217, 265, 441, 570, 970
SfcI CTRYAG 1 cut(s) 603
SinI GGWCC 1 cut(s) 359
SmiMI CAYNNNNRTG 4 cut(s) 380, 449, 762, 1205
Sse9I AATT 9 cut(s) 32, 87, 150, 288, 624, 927, 1038, 1272, 1375
SseBI AGGCCT 1 cut(s) 470
SsiI CCGC 3 cut(s) 454, 609, 1026
SspMI CTAG 3 cut(s) 849, 1019, 1035
SstI GAGCTC 1 cut(s) 856
StuI AGGCCT 1 cut(s) 470
StyD4I CCNGG 1 cut(s) 240
StyI CCWWGG 3 cut(s) 375, 760, 1044
TaaI ACNGT 4 cut(s) 411, 508, 800, 935
TaiI ACGT 5 cut(s) 113, 538, 837, 911, 1071
TaqI TCGA 4 cut(s) 96, 804, 1005, 1194
TasI AATT 9 cut(s) 32, 87, 150, 288, 624, 927, 1038, 1272, 1375
TauI GCSGC 2 cut(s) 611, 1029
TfiI GAWTC 4 cut(s) 93, 585, 793, 1467
Tru1I TTAA 6 cut(s) 35, 218, 287, 813, 866, 1101
Tru9I TTAA 6 cut(s) 35, 218, 287, 813, 866, 1101
TscAI CASTG 7 cut(s) 132, 208, 358, 568, 708, 803, 844
TseFI GTSAC 7 cut(s) 349, 559, 699, 722, 1209, 1229, 1400
TseI GCWGC 5 cut(s) 230, 416, 605, 1130, 1142
Tsp45I GTSAC 7 cut(s) 349, 559, 699, 722, 1209, 1229, 1400
TspDTI ATGAA 4 cut(s) 609, 888, 1063, 1473
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 7 cut(s) 132, 208, 358, 568, 708, 803, 844
VpaK11BI GGWCC 1 cut(s) 359
VspI ATTAAT 2 cut(s) 287, 1101
XapI RAATTY 2 cut(s) 1038, 1272
XbaI TCTAGA 1 cut(s) 1034
XceI RCATGY 1 cut(s) 1250
XspI CTAG 3 cut(s) 849, 1019, 1035
ZraI GACGTC 1 cut(s) 835
Zsp2I ATGCAT 1 cut(s) 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.