Rorug01G0332200
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
45069262 .. 45071567
2306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0332200.1

Sequence Viewer

Length: 1779 bp
ATGACGGTTTCCGGTCCGGGCAGATGGGCCGACACCAAAGGCATGACCCTCCAGGTCCTCAACGGCCGGTGGTTCATGGTCTTTGCATCTCTTTTAATCATGTCCGCTGCCGGCGCCACCTACATGTTCGGCCTCTACTCTCCCGATATCAAAAAGGTCCTCGGCTACGACCAAAGCACACTCAACCTCCTCAGCTTCTTCAAAGACTTGGGCTCCAACGTCGGCATCCTCTCCGGCCTCCTCAACGAGGTCACGCCGCCGTGGGTGGTCCTCGTGGTCGGCGCCGTCCTCAACTTCTTCGGATACTTAATGATCTGGCTCTCCGTCACCGAGAAAATCGCCAGACCAAAAGTCTGGCAGATGTGCCTCTACATTTGCATCGGCGCCAATTCCCAGTCGTTCGCCAACACCGGCTCGCTGGTCACGTGCGTCAAGAACTTCCCCGAGAGCCGTGGCGTCGTTTTGGGGCTCCTCAAGGGCTACGTCGGCCTCAGCGGCGCCATCATCACGCAGATGTATTTTGCTTTTTACTACAACGACACCAGAGCCTTGATTCTGCTCATCGGGTGGCTTCCGGCGGCCATATCGTTCGCCTTTCTGAAGACTATTAGGATCATGAAGGTGATCAGACAAAGCAACGAGGTCAAGGTGTTCTACAACATGTTGTACATCTCTCTCGGGCTCGCTGGCTTTCTGATGATCATGATCATAATACAGAATAGGGTGCACTTCACTCAAGGGGAGTACGGAGCCAGCACCGCCATGGTGCTCTTCTTGCTCGCCCTCCCCATCGTGGTGGTTGTAATTGAGGAGTACAAGATTTGGGAGAGCAAAAAACTCGAGATGAACGGTGACGTAAAAATAGTCACTGAAAAGCCCATCCCTGCTGCCGTCCCAACCGATAAACAATTAGTGGATGAAGCTCCTGAGTCCACCGCGGAACCTACCCAATCTTGTTGGAAAACTTGTTTTCAGCCACCAAATAGAGGGGAGGACTACACAATTCTCCAAGCTCTATTCAGCATTGACATGCTCATACTATTCATGGCGTGCATATGTGGTGTTGGGGGCACATTGACCGCAATTGACAATTTGGGTCAGATTGGGACTTCGTTGAGATATGCCAACCGCAGCAGGAGCACTTTCGTGTCCCTAGTCAGCATATGGAATTATCTCGGTCGAGTTGTTGCCGGATTCTACTCTGAATACTTACTAAAACGATACAAATTCCCTCGTCCTCTCATTCTAACCCTAACCCTCTTGCTCTCTTGCGTTGGTCATCTTCTCATTGCCTTCAATGTTAAAAATGGCCTCTACCTGGCCTCAGTCATAATAGGATTTTGCTTCGGCGCGCAATGGCCTTTGCTCTTCGCCATAATCTCCGAGCTCTTCGGGCTCAAGTACTACTCGACCTTGTACAATTTCGGGTCAGCCGCGAGCCCGGTAGGCTTGTACTTGCTCAACGTGAAACTCACCGGTCATGTGTACGATAAGGAGGCGACGAAGCAATTGGAGGCTTCAGGGCTCACTAGGAAAGCAAATACGGAGTTGACTTGTATTGGTGATGAGTGCTTCAAGTTGTCCTTTATTATAATTGCAGCTGCCACATTTTTTGGGGCACTGGTTTCACTGATTTTAGTGAAAAGGACAAAGAAGTTTTACCAGAGTGATATATACAAGAAGTTCAGAGAGGAGGCAGAAAAAAATGCTGAGACTGAAATGGCCGTGGGAGAAAATGGTGTCACCAATGGCCATCACCAAACCAATGAAAGATCATAG
Functional Annotation

Protein Analysis

592

Amino Acids

65.74

Weight (kDa)

8.94

Isoelectric Point (pI)

32.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 19 - 168 3.7e-08 Major Facilitator Superfamily
Nodulin-like PF06813 23 - 268 1.5e-93 Nodulin-like
NFD4_C PF23262 339 - 554 1.1e-17 NFD4, C-terminal domain
MFS_1 PF07690 379 - 550 2.2e-08 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1592
AccB1I GGYRCC 4 cut(s) 113, 281, 383, 497
AccII CGCG 3 cut(s) 938, 1352, 1436
AclWI GGATC 1 cut(s) 620
AcoI YGGCCR 4 cut(s) 64, 579, 1722, 1750
AcsI RAATTY 1 cut(s) 1226
AcuI CTGAAG 2 cut(s) 620, 1503
AcvI CACGTG 1 cut(s) 426
AcyI GRCGYC 5 cut(s) 114, 282, 384, 456, 498
AfaI GTAC 7 cut(s) 668, 746, 815, 1403, 1418, 1454, 1487
AfiI CCNNNNNNNGG 4 cut(s) 247, 793, 986, 1318
AflIII ACRYGT 2 cut(s) 123, 660
AgeI ACCGGT 1 cut(s) 1475
AgsI TTSAA 3 cut(s) 202, 1297, 1576
AhdI GACNNNNNGTC 1 cut(s) 350
AjnI CCWGG 2 cut(s) 51, 1317
AleI CACNNNNGTG 1 cut(s) 1145
AluBI AGCT 5 cut(s) 195, 923, 1013, 1387, 1601
AluI AGCT 5 cut(s) 195, 923, 1013, 1387, 1601
Alw21I GWGCWC 4 cut(s) 729, 771, 1142, 1389
Alw26I GTCTC 1 cut(s) 1706
Alw44I GTGCAC 1 cut(s) 725
AlwI GGATC 1 cut(s) 620
Ama87I CYCGRG 3 cut(s) 443, 677, 839
ApaLI GTGCAC 1 cut(s) 725
ApeKI GCWGC 5 cut(s) 107, 887, 1131, 1598, 1601
ApoI RAATTY 1 cut(s) 1226
AsiGI ACCGGT 1 cut(s) 1475
AspLEI GCGC 6 cut(s) 116, 284, 386, 500, 1352, 1354
AspS9I GGNCC 5 cut(s) 14, 27, 55, 157, 268
AsuC2I CCSGG 2 cut(s) 18, 1442
AsuHPI GGTGA 7 cut(s) 319, 634, 863, 1465, 1574, 1735, 1748
AvaI CYCGRG 3 cut(s) 443, 677, 839
AvaII GGWCC 4 cut(s) 14, 55, 157, 268
BaeGI GKGCMC 3 cut(s) 729, 1073, 1621
BalI TGGCCA 1 cut(s) 1752
BanI GGYRCC 4 cut(s) 113, 281, 383, 497
BanII GRGCYC 7 cut(s) 215, 471, 684, 1389, 1398, 1442, 1527
BauI CACGAG 1 cut(s) 272
BbrPI CACGTG 1 cut(s) 426
BbsI GAAGAC 1 cut(s) 608
Bbv12I GWGCWC 4 cut(s) 729, 771, 1142, 1389
BbvCI CCTCAGC 2 cut(s) 191, 491
BbvI GCAGC 5 cut(s) 94, 874, 1143, 1588, 1610
BccI CCATC 5 cut(s) 18, 509, 797, 887, 1761
BceAI ACGGC 6 cut(s) 79, 244, 269, 435, 875, 1709
BcgI CGANNNNNNTGC 2 cut(s) 820, 854
BciT130I CCWGG 2 cut(s) 53, 1319
BciVI GTATCC 1 cut(s) 296
BclI TGATCA 3 cut(s) 624, 699, 705
BcnI CCSGG 2 cut(s) 18, 1442
BcoDI GTCTC 1 cut(s) 1706
BfaI CTAG 2 cut(s) 1154, 1530
BfoI RGCGCY 4 cut(s) 117, 285, 387, 501
BfuI GTATCC 1 cut(s) 296
BglI GCCNNNNNGGC 2 cut(s) 495, 1446
BisI GCNGC 9 cut(s) 108, 257, 496, 579, 888, 1132, 1434, 1599, 1602
BlsI GCNGC 9 cut(s) 109, 258, 497, 580, 889, 1133, 1435, 1600, 1603
BmcAI AGTACT 1 cut(s) 1403
Bme1390I CCNGG 4 cut(s) 18, 53, 1319, 1442
Bme18I GGWCC 4 cut(s) 14, 55, 157, 268
BmeRI GACNNNNNGTC 1 cut(s) 350
BmeT110I CYCGRG 3 cut(s) 443, 677, 839
BmgT120I GGNCC 5 cut(s) 14, 27, 55, 157, 268
BmiI GGNNCC 8 cut(s) 115, 214, 283, 385, 470, 499, 751, 942
BmrFI CCNGG 4 cut(s) 18, 53, 1319, 1442
BmrI ACTGGG 1 cut(s) 388
BmsI GCATC 3 cut(s) 95, 234, 387
BmuI ACTGGG 1 cut(s) 388
BpiI GAAGAC 1 cut(s) 608
BpmI CTGGAG 1 cut(s) 35
Bpu10I CCTNAGC 2 cut(s) 191, 491
BpuEI CTTGAG 3 cut(s) 458, 720, 1382
BpuMI CCSGG 2 cut(s) 18, 1442
BsaAI YACGTR 1 cut(s) 426
BsaBI GATNNNNATC 1 cut(s) 704
BsaHI GRCGYC 5 cut(s) 114, 282, 384, 456, 498
BsaJI CCNNGG 6 cut(s) 160, 260, 451, 762, 936, 1725
BsaWI WCCGGW 2 cut(s) 11, 1475
BsaXI ACNNNNNCTCC 4 cut(s) 171, 197, 201, 227
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 793, 986, 1318
Bse118I RCCGGY 4 cut(s) 66, 110, 410, 1475
Bse1I ACTGG 2 cut(s) 394, 1626
Bse3DI GCAATG 2 cut(s) 1287, 1361
Bse8I GATNNNNATC 1 cut(s) 704
BseBI CCWGG 2 cut(s) 53, 1319
BseDI CCNNGG 6 cut(s) 160, 260, 451, 762, 936, 1725
BseGI GGATG 3 cut(s) 225, 879, 922
BseJI GATNNNNATC 1 cut(s) 704
BseLI CCNNNNNNNGG 4 cut(s) 247, 793, 986, 1318
BseMI GCAATG 2 cut(s) 1287, 1361
BseMII CTCAG 5 cut(s) 205, 505, 918, 1338, 1701
BseNI ACTGG 2 cut(s) 394, 1626
BsePI GCGCGC 1 cut(s) 1350
BseRI GAGGAG 5 cut(s) 179, 230, 461, 824, 1706
BseSI GKGCMC 3 cut(s) 729, 1073, 1621
BseX3I CGGCCG 1 cut(s) 64
BseXI GCAGC 5 cut(s) 94, 874, 1143, 1588, 1610
Bsh1236I CGCG 3 cut(s) 938, 1352, 1436
Bsh1285I CGRYCG 2 cut(s) 67, 1180
BshNI GGYRCC 4 cut(s) 113, 281, 383, 497
BshTI ACCGGT 1 cut(s) 1475
BsiEI CGRYCG 2 cut(s) 67, 1180
BsiHKAI GWGCWC 4 cut(s) 729, 771, 1142, 1389
BsiHKCI CYCGRG 3 cut(s) 443, 677, 839
BslFI GGGAC 3 cut(s) 878, 1120, 1135
BslI CCNNNNNNNGG 4 cut(s) 247, 793, 986, 1318
BsmAI GTCTC 1 cut(s) 1706
BsmFI GGGAC 3 cut(s) 878, 1120, 1135
BsoBI CYCGRG 3 cut(s) 443, 677, 839
Bsp1407I TGTACA 2 cut(s) 666, 1416
Bsp143I GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
Bsp19I CCATGG 1 cut(s) 762
BspCNI CTCAG 5 cut(s) 204, 504, 919, 1337, 1702
BspFNI CGCG 3 cut(s) 938, 1352, 1436
BspHI TCATGA 2 cut(s) 615, 702
BspLI GGNNCC 8 cut(s) 115, 214, 283, 385, 470, 499, 751, 942
BspPI GGATC 1 cut(s) 620
BspQI GCTCTTC 3 cut(s) 776, 1373, 1394
BspT107I GGYRCC 4 cut(s) 113, 281, 383, 497
BsrDI GCAATG 2 cut(s) 1287, 1361
BsrFI RCCGGY 4 cut(s) 66, 110, 410, 1475
BsrGI TGTACA 2 cut(s) 666, 1416
BsrI ACTGG 2 cut(s) 394, 1626
BssAI RCCGGY 4 cut(s) 66, 110, 410, 1475
BssECI CCNNGG 6 cut(s) 160, 260, 451, 762, 936, 1725
BssHII GCGCGC 1 cut(s) 1350
BssMI GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
BssNI GRCGYC 5 cut(s) 114, 282, 384, 456, 498
BssSI CACGAG 1 cut(s) 272
BssT1I CCWWGG 1 cut(s) 762
Bst2BI CACGAG 1 cut(s) 272
Bst2UI CCWGG 2 cut(s) 53, 1319
Bst4CI ACNGT 2 cut(s) 7, 851
Bst6I CTCTTC 3 cut(s) 776, 1373, 1394
BstACI GRCGYC 5 cut(s) 114, 282, 384, 456, 498
BstAUI TGTACA 2 cut(s) 666, 1416
BstBAI YACGTR 1 cut(s) 426
BstC8I GCNNGC 9 cut(s) 112, 416, 684, 688, 754, 780, 1051, 1352, 1438
BstDEI CTNAG 5 cut(s) 191, 491, 927, 1324, 1710
BstDSI CCRYGG 5 cut(s) 260, 451, 762, 936, 1725
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 3 cut(s) 225, 879, 922
BstFNI CGCG 3 cut(s) 938, 1352, 1436
BstH2I RGCGCY 4 cut(s) 117, 285, 387, 501
BstHHI GCGC 6 cut(s) 116, 284, 386, 500, 1352, 1354
BstKTI GATC 6 cut(s) 315, 615, 627, 702, 708, 1775
BstMAI GTCTC 1 cut(s) 1706
BstMBI GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
BstMCI CGRYCG 2 cut(s) 67, 1180
BstMWI GCNNNNNNNGC 8 cut(s) 113, 486, 495, 758, 775, 1137, 1393, 1446
BstNI CCWGG 2 cut(s) 53, 1319
BstNSI RCATGY 3 cut(s) 127, 664, 1033
BstSCI CCNGG 4 cut(s) 16, 51, 1317, 1440
BstSLI GKGCMC 3 cut(s) 729, 1073, 1621
BstUI CGCG 3 cut(s) 938, 1352, 1436
BstV1I GCAGC 5 cut(s) 94, 874, 1143, 1588, 1610
BstV2I GAAGAC 1 cut(s) 608
BstXI CCANNNNNNTGG 2 cut(s) 354, 796
BstZI CGGCCG 1 cut(s) 64
BsuI GTATCC 1 cut(s) 296
BtgI CCRYGG 5 cut(s) 260, 451, 762, 936, 1725
BtsCI GGATG 3 cut(s) 225, 879, 922
BtsIMutI CAGTG 3 cut(s) 867, 1619, 1628
Cac8I GCNNGC 9 cut(s) 112, 416, 684, 688, 754, 780, 1051, 1352, 1438
CciI TCATGA 2 cut(s) 615, 702
CfoI GCGC 6 cut(s) 116, 284, 386, 500, 1352, 1354
Cfr10I RCCGGY 4 cut(s) 66, 110, 410, 1475
Cfr13I GGNCC 5 cut(s) 14, 27, 55, 157, 268
Cfr42I CCGCGG 1 cut(s) 939
CpoI CGGWCCG 1 cut(s) 14
CseI GACGC 2 cut(s) 418, 445
Csp6I GTAC 7 cut(s) 667, 745, 814, 1402, 1417, 1453, 1486
CspAI ACCGGT 1 cut(s) 1475
CspCI CAANNNNNGTGG 2 cut(s) 1594, 1629
CspI CGGWCCG 1 cut(s) 14
CviQI GTAC 7 cut(s) 667, 745, 814, 1402, 1417, 1453, 1486
DdeI CTNAG 5 cut(s) 191, 491, 927, 1324, 1710
DinI GGCGCC 4 cut(s) 115, 283, 385, 499
DpnI GATC 6 cut(s) 314, 614, 626, 701, 707, 1774
DpnII GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
DriI GACNNNNNGTC 1 cut(s) 350
EaeI YGGCCR 4 cut(s) 64, 579, 1722, 1750
EagI CGGCCG 1 cut(s) 64
Eam1104I CTCTTC 3 cut(s) 776, 1373, 1394
Eam1105I GACNNNNNGTC 1 cut(s) 350
EarI CTCTTC 3 cut(s) 776, 1373, 1394
Ecl136II GAGCTC 1 cut(s) 1387
EclXI CGGCCG 1 cut(s) 64
Eco130I CCWWGG 1 cut(s) 762
Eco24I GRGCYC 7 cut(s) 215, 471, 684, 1389, 1398, 1442, 1527
Eco32I GATATC 1 cut(s) 148
Eco47I GGWCC 4 cut(s) 14, 55, 157, 268
Eco52I CGGCCG 1 cut(s) 64
Eco53kI GAGCTC 1 cut(s) 1387
Eco57I CTGAAG 2 cut(s) 620, 1503
Eco72I CACGTG 1 cut(s) 426
Eco88I CYCGRG 3 cut(s) 443, 677, 839
EcoICRI GAGCTC 1 cut(s) 1387
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoO109I RGGNCCY 2 cut(s) 55, 157
EcoRII CCWGG 2 cut(s) 51, 1317
EcoRV GATATC 1 cut(s) 148
EcoT14I CCWWGG 1 cut(s) 762
EcoT38I GRGCYC 7 cut(s) 215, 471, 684, 1389, 1398, 1442, 1527
EgeI GGCGCC 4 cut(s) 115, 283, 385, 499
EheI GGCGCC 4 cut(s) 115, 283, 385, 499
ErhI CCWWGG 1 cut(s) 762
FalI AAGNNNNNCTT 2 cut(s) 1568, 1600
FaqI GGGAC 3 cut(s) 878, 1120, 1135
FauNDI CATATG 2 cut(s) 1055, 1163
FbaI TGATCA 3 cut(s) 624, 699, 705
Fnu4HI GCNGC 9 cut(s) 108, 257, 496, 579, 888, 1132, 1434, 1599, 1602
FokI GGATG 3 cut(s) 212, 866, 929
FriOI GRGCYC 7 cut(s) 215, 471, 684, 1389, 1398, 1442, 1527
Fsp4HI GCNGC 9 cut(s) 108, 257, 496, 579, 888, 1132, 1434, 1599, 1602
FspBI CTAG 2 cut(s) 1154, 1530
GlaI GCGC 6 cut(s) 115, 283, 385, 499, 1351, 1353
GluI GCNGC 9 cut(s) 108, 257, 496, 579, 888, 1132, 1434, 1599, 1602
GsuI CTGGAG 1 cut(s) 35
HaeII RGCGCY 4 cut(s) 117, 285, 387, 501
HgaI GACGC 2 cut(s) 418, 445
HhaI GCGC 6 cut(s) 116, 284, 386, 500, 1352, 1354
Hin1I GRCGYC 5 cut(s) 114, 282, 384, 456, 498
Hin6I GCGC 6 cut(s) 114, 282, 384, 498, 1350, 1352
HinP1I GCGC 6 cut(s) 114, 282, 384, 498, 1350, 1352
HincII GTYRAC 1 cut(s) 1551
HindII GTYRAC 1 cut(s) 1551
HinfI GANTC 3 cut(s) 553, 929, 1194
HphI GGTGA 7 cut(s) 319, 634, 863, 1465, 1574, 1735, 1748
Hpy166II GTNNAC 4 cut(s) 727, 933, 1486, 1551
Hpy188I TCNGA 8 cut(s) 302, 600, 629, 696, 1101, 1204, 1384, 1688
Hpy188III TCNNGA 6 cut(s) 143, 433, 616, 703, 841, 926
Hpy8I GTNNAC 4 cut(s) 727, 933, 1486, 1551
Hpy99I CGWCG 4 cut(s) 224, 461, 488, 1504
HpyAV CCTTC 2 cut(s) 613, 1303
HpyCH4III ACNGT 2 cut(s) 7, 851
HpyCH4IV ACGT 5 cut(s) 219, 425, 483, 855, 1464
HpyCH4V TGCA 5 cut(s) 86, 378, 727, 1053, 1598
HpyF10VI GCNNNNNNNGC 8 cut(s) 113, 486, 495, 758, 775, 1137, 1393, 1446
HpyF3I CTNAG 5 cut(s) 191, 491, 927, 1324, 1710
HpySE526I ACGT 5 cut(s) 219, 425, 483, 855, 1464
Hsp92I GRCGYC 5 cut(s) 114, 282, 384, 456, 498
HspAI GCGC 6 cut(s) 114, 282, 384, 498, 1350, 1352
KasI GGCGCC 4 cut(s) 113, 281, 383, 497
KroI GCCGGC 1 cut(s) 110
KroNI GCCGGC 1 cut(s) 112
Ksp22I TGATCA 3 cut(s) 624, 699, 705
KspI CCGCGG 1 cut(s) 939
Kzo9I GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
LguI GCTCTTC 3 cut(s) 776, 1373, 1394
LmnI GCTCC 5 cut(s) 218, 474, 749, 928, 1137
Lsp1109I GCAGC 5 cut(s) 94, 874, 1143, 1588, 1610
LweI GCATC 3 cut(s) 95, 234, 387
MaeI CTAG 2 cut(s) 1154, 1530
MaeII ACGT 5 cut(s) 219, 425, 483, 855, 1464
MaeIII GTNAC 6 cut(s) 250, 325, 421, 851, 865, 1741
MalI GATC 6 cut(s) 314, 614, 626, 701, 707, 1774
MboI GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
MboII GAAGA 7 cut(s) 190, 289, 613, 763, 1274, 1360, 1381
MfeI CAATTG 2 cut(s) 1083, 1508
MlsI TGGCCA 1 cut(s) 1752
MluNI TGGCCA 1 cut(s) 1752
Mly113I GGCGCC 4 cut(s) 114, 282, 384, 498
MlyI GAGTC 1 cut(s) 938
MmeI TCCRAC 2 cut(s) 240, 938
Mox20I TGGCCA 1 cut(s) 1752
MroNI GCCGGC 1 cut(s) 110
MscI TGGCCA 1 cut(s) 1752
MseI TTAA 3 cut(s) 95, 308, 1302
MslI CAYNNNNRTG 7 cut(s) 122, 512, 620, 761, 794, 1028, 1145
Msp20I TGGCCA 1 cut(s) 1752
MspA1I CMGCKG 4 cut(s) 107, 495, 938, 1601
MspR9I CCNGG 4 cut(s) 18, 53, 1319, 1442
MunI CAATTG 2 cut(s) 1083, 1508
MvaI CCWGG 2 cut(s) 53, 1319
MvnI CGCG 3 cut(s) 938, 1352, 1436
MwoI GCNNNNNNNGC 8 cut(s) 113, 486, 495, 758, 775, 1137, 1393, 1446
NaeI GCCGGC 1 cut(s) 112
NarI GGCGCC 4 cut(s) 114, 282, 384, 498
NciI CCSGG 2 cut(s) 18, 1442
NcoI CCATGG 1 cut(s) 762
NdeI CATATG 2 cut(s) 1055, 1163
NdeII GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
NgoMIV GCCGGC 1 cut(s) 110
NlaIV GGNNCC 8 cut(s) 115, 214, 283, 385, 470, 499, 751, 942
NmeAIII GCCGAG 1 cut(s) 141
NmuCI GTSAC 6 cut(s) 250, 325, 421, 851, 865, 1741
NspI RCATGY 3 cut(s) 127, 664, 1033
OliI CACNNNNGTG 1 cut(s) 1145
PaeR7I CTCGAG 1 cut(s) 839
PagI TCATGA 2 cut(s) 615, 702
PauI GCGCGC 1 cut(s) 1350
PciI ACATGT 2 cut(s) 123, 660
PciSI GCTCTTC 3 cut(s) 776, 1373, 1394
PcsI WCGNNNNNNNCGW 1 cut(s) 422
PdiI GCCGGC 1 cut(s) 112
PfeI GAWTC 2 cut(s) 553, 1194
PinAI ACCGGT 1 cut(s) 1475
PkrI GCNGC 9 cut(s) 109, 258, 497, 580, 889, 1133, 1435, 1600, 1603
PleI GAGTC 1 cut(s) 937
PluTI GGCGCC 4 cut(s) 117, 285, 387, 501
PmaCI CACGTG 1 cut(s) 426
PmlI CACGTG 1 cut(s) 426
PpsI GAGTC 1 cut(s) 937
Ppu21I YACGTR 1 cut(s) 426
PpuMI RGGWCCY 2 cut(s) 55, 157
PscI ACATGT 2 cut(s) 123, 660
PsiI TTATAA 1 cut(s) 1592
Psp124BI GAGCTC 1 cut(s) 1389
Psp5II RGGWCCY 2 cut(s) 55, 157
Psp6I CCWGG 2 cut(s) 51, 1317
PspCI CACGTG 1 cut(s) 426
PspGI CCWGG 2 cut(s) 51, 1317
PspN4I GGNNCC 8 cut(s) 115, 214, 283, 385, 470, 499, 751, 942
PspPI GGNCC 5 cut(s) 14, 27, 55, 157, 268
PspPPI RGGWCCY 2 cut(s) 55, 157
PteI GCGCGC 1 cut(s) 1350
PvuII CAGCTG 1 cut(s) 1601
RsaI GTAC 7 cut(s) 668, 746, 815, 1403, 1418, 1454, 1487
RsaNI GTAC 7 cut(s) 667, 745, 814, 1402, 1417, 1453, 1486
RseI CAYNNNNRTG 7 cut(s) 122, 512, 620, 761, 794, 1028, 1145
Rsr2I CGGWCCG 1 cut(s) 14
RsrII CGGWCCG 1 cut(s) 14
SacI GAGCTC 1 cut(s) 1389
SacII CCGCGG 1 cut(s) 939
SapI GCTCTTC 3 cut(s) 776, 1373, 1394
SaqAI TTAA 3 cut(s) 95, 308, 1302
SatI GCNGC 9 cut(s) 108, 257, 496, 579, 888, 1132, 1434, 1599, 1602
Sau3AI GATC 6 cut(s) 312, 612, 624, 699, 705, 1772
Sau96I GGNCC 5 cut(s) 14, 27, 55, 157, 268
ScaI AGTACT 1 cut(s) 1403
SchI GAGTC 1 cut(s) 938
ScrFI CCNGG 4 cut(s) 18, 53, 1319, 1442
SfaNI GCATC 3 cut(s) 95, 234, 387
SfoI GGCGCC 4 cut(s) 115, 283, 385, 499
Sfr274I CTCGAG 1 cut(s) 839
Sfr303I CCGCGG 1 cut(s) 939
SgrBI CCGCGG 1 cut(s) 939
SinI GGWCC 4 cut(s) 14, 55, 157, 268
SlaI CTCGAG 1 cut(s) 839
SmiMI CAYNNNNRTG 7 cut(s) 122, 512, 620, 761, 794, 1028, 1145
SmlI CTYRAG 4 cut(s) 473, 735, 839, 1397
SmoI CTYRAG 4 cut(s) 473, 735, 839, 1397
SspDI GGCGCC 4 cut(s) 113, 281, 383, 497
SspMI CTAG 2 cut(s) 1154, 1530
SstI GAGCTC 1 cut(s) 1389
StyD4I CCNGG 4 cut(s) 16, 51, 1317, 1440
StyI CCWWGG 1 cut(s) 762
TaaI ACNGT 2 cut(s) 7, 851
TaiI ACGT 5 cut(s) 222, 428, 486, 858, 1467
TaqI TCGA 3 cut(s) 840, 1180, 1409
TaqII GACCGA 1 cut(s) 1166
TatI WGTACW 5 cut(s) 666, 813, 1401, 1416, 1452
TauI GCSGC 4 cut(s) 259, 498, 581, 1436
TfiI GAWTC 2 cut(s) 553, 1194
Tru1I TTAA 3 cut(s) 95, 308, 1302
Tru9I TTAA 3 cut(s) 95, 308, 1302
TscAI CASTG 3 cut(s) 874, 1626, 1635
TseFI GTSAC 6 cut(s) 250, 325, 421, 851, 865, 1741
TseI GCWGC 5 cut(s) 107, 887, 1131, 1598, 1601
Tsp45I GTSAC 6 cut(s) 250, 325, 421, 851, 865, 1741
TspDTI ATGAA 5 cut(s) 64, 632, 860, 933, 1033
TspGWI ACGGA 3 cut(s) 313, 762, 1559
TspRI CASTG 3 cut(s) 874, 1626, 1635
VneI GTGCAC 1 cut(s) 725
VpaK11BI GGWCC 4 cut(s) 14, 55, 157, 268
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 1 cut(s) 1226
XceI RCATGY 3 cut(s) 127, 664, 1033
XcmI CCANNNNNNNNNTGG 1 cut(s) 760
XhoI CTCGAG 1 cut(s) 839
XspI CTAG 2 cut(s) 1154, 1530
ZrmI AGTACT 1 cut(s) 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.