mediator of RNA polymerase II transcription subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 507 |
| AccB1I | GGYRCC | 2 cut(s) | 107, 507 |
| AciI | CCGC | 4 cut(s) | 112, 694, 712, 730 |
| AclWI | GGATC | 2 cut(s) | 387, 456 |
| AcoI | YGGCCR | 1 cut(s) | 713 |
| AcyI | GRCGYC | 1 cut(s) | 22 |
| AfaI | GTAC | 2 cut(s) | 277, 509 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 146, 308, 569, 676, 703, 704 |
| AgsI | TTSAA | 1 cut(s) | 265 |
| AluBI | AGCT | 2 cut(s) | 219, 515 |
| AluI | AGCT | 2 cut(s) | 219, 515 |
| Alw26I | GTCTC | 2 cut(s) | 288, 435 |
| AlwI | GGATC | 2 cut(s) | 387, 456 |
| Ama87I | CYCGRG | 1 cut(s) | 291 |
| AoxI | GGCC | 3 cut(s) | 247, 682, 713 |
| Asp718I | GGTACC | 1 cut(s) | 507 |
| AspLEI | GCGC | 1 cut(s) | 435 |
| AspS9I | GGNCC | 3 cut(s) | 247, 644, 683 |
| AsuC2I | CCSGG | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 2 cut(s) | 245, 530 |
| AvaI | CYCGRG | 1 cut(s) | 291 |
| AvaII | GGWCC | 1 cut(s) | 644 |
| BaeGI | GKGCMC | 1 cut(s) | 112 |
| BanI | GGYRCC | 2 cut(s) | 107, 507 |
| BanII | GRGCYC | 1 cut(s) | 292 |
| BauI | CACGAG | 1 cut(s) | 27 |
| BccI | CCATC | 4 cut(s) | 125, 419, 596, 724 |
| BceAI | ACGGC | 2 cut(s) | 35, 468 |
| BciVI | GTATCC | 1 cut(s) | 188 |
| BcnI | CCSGG | 1 cut(s) | 83 |
| BcoDI | GTCTC | 2 cut(s) | 288, 435 |
| BfaI | CTAG | 3 cut(s) | 354, 531, 699 |
| BfmI | CTRYAG | 1 cut(s) | 172 |
| BfoI | RGCGCY | 1 cut(s) | 436 |
| BfuI | GTATCC | 1 cut(s) | 188 |
| BglII | AGATCT | 1 cut(s) | 239 |
| BisI | GCNGC | 1 cut(s) | 713 |
| BlsI | GCNGC | 1 cut(s) | 714 |
| Bme1390I | CCNGG | 1 cut(s) | 83 |
| Bme18I | GGWCC | 1 cut(s) | 644 |
| BmeT110I | CYCGRG | 1 cut(s) | 291 |
| BmgT120I | GGNCC | 3 cut(s) | 247, 644, 683 |
| BmiI | GGNNCC | 3 cut(s) | 109, 482, 509 |
| BmrFI | CCNGG | 1 cut(s) | 83 |
| BmsI | GCATC | 2 cut(s) | 64, 78 |
| BpuMI | CCSGG | 1 cut(s) | 83 |
| BsaBI | GATNNNNATC | 2 cut(s) | 399, 558 |
| BsaHI | GRCGYC | 1 cut(s) | 22 |
| BsaJI | CCNNGG | 1 cut(s) | 166 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 146, 308, 569, 676, 703, 704 |
| Bse3DI | GCAATG | 1 cut(s) | 72 |
| Bse8I | GATNNNNATC | 2 cut(s) | 399, 558 |
| BseDI | CCNNGG | 1 cut(s) | 166 |
| BseGI | GGATG | 2 cut(s) | 418, 607 |
| BseJI | GATNNNNATC | 2 cut(s) | 399, 558 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 146, 308, 569, 676, 703, 704 |
| BseMI | GCAATG | 1 cut(s) | 72 |
| BseRI | GAGGAG | 4 cut(s) | 192, 195, 198, 240 |
| BseSI | GKGCMC | 1 cut(s) | 112 |
| BseYI | CCCAGC | 1 cut(s) | 511 |
| Bsh1285I | CGRYCG | 1 cut(s) | 694 |
| BshFI | GGCC | 3 cut(s) | 249, 684, 715 |
| BshNI | GGYRCC | 2 cut(s) | 107, 507 |
| BsiEI | CGRYCG | 1 cut(s) | 694 |
| BsiHKCI | CYCGRG | 1 cut(s) | 291 |
| BsiSI | CCGG | 1 cut(s) | 82 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 146, 308, 569, 676, 703, 704 |
| BsmAI | GTCTC | 2 cut(s) | 288, 435 |
| BsmI | GAATGC | 1 cut(s) | 263 |
| BsnI | GGCC | 3 cut(s) | 249, 684, 715 |
| BsoBI | CYCGRG | 1 cut(s) | 291 |
| Bsp1286I | GDGCHC | 2 cut(s) | 112, 292 |
| Bsp143I | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| Bsp19I | CCATGG | 1 cut(s) | 166 |
| BspACI | CCGC | 4 cut(s) | 112, 694, 712, 730 |
| BspANI | GGCC | 3 cut(s) | 249, 684, 715 |
| BspHI | TCATGA | 1 cut(s) | 397 |
| BspLI | GGNNCC | 3 cut(s) | 109, 482, 509 |
| BspPI | GGATC | 2 cut(s) | 387, 456 |
| BspT107I | GGYRCC | 2 cut(s) | 107, 507 |
| BsrDI | GCAATG | 1 cut(s) | 72 |
| BssECI | CCNNGG | 1 cut(s) | 166 |
| BssMI | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| BssNI | GRCGYC | 1 cut(s) | 22 |
| BssSI | CACGAG | 1 cut(s) | 27 |
| BssT1I | CCWWGG | 1 cut(s) | 166 |
| Bst2BI | CACGAG | 1 cut(s) | 27 |
| Bst4CI | ACNGT | 2 cut(s) | 419, 671 |
| Bst6I | CTCTTC | 3 cut(s) | 205, 313, 349 |
| BstACI | GRCGYC | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 2 cut(s) | 112, 682 |
| BstDSI | CCRYGG | 1 cut(s) | 166 |
| BstEII | GGTNACC | 1 cut(s) | 665 |
| BstF5I | GGATG | 2 cut(s) | 418, 607 |
| BstH2I | RGCGCY | 1 cut(s) | 436 |
| BstHHI | GCGC | 1 cut(s) | 435 |
| BstKTI | GATC | 9 cut(s) | 58, 242, 382, 397, 403, 451, 490, 523, 556 |
| BstMAI | GTCTC | 2 cut(s) | 288, 435 |
| BstMBI | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| BstMCI | CGRYCG | 1 cut(s) | 694 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 216, 489, 681 |
| BstPI | GGTNACC | 1 cut(s) | 665 |
| BstSCI | CCNGG | 1 cut(s) | 81 |
| BstSFI | CTRYAG | 1 cut(s) | 172 |
| BstSLI | GKGCMC | 1 cut(s) | 112 |
| BstX2I | RGATCY | 1 cut(s) | 239 |
| BstYI | RGATCY | 1 cut(s) | 239 |
| BsuI | GTATCC | 1 cut(s) | 188 |
| BsuRI | GGCC | 3 cut(s) | 249, 684, 715 |
| BtgI | CCRYGG | 1 cut(s) | 166 |
| BtsCI | GGATG | 2 cut(s) | 418, 607 |
| BtsI | GCAGTG | 1 cut(s) | 628 |
| BtsIMutI | CAGTG | 2 cut(s) | 505, 628 |
| Cac8I | GCNNGC | 2 cut(s) | 112, 682 |
| CciI | TCATGA | 1 cut(s) | 397 |
| CfoI | GCGC | 1 cut(s) | 435 |
| Cfr13I | GGNCC | 3 cut(s) | 247, 644, 683 |
| CseI | GACGC | 1 cut(s) | 11 |
| Csp6I | GTAC | 2 cut(s) | 276, 508 |
| CviAII | CATG | 4 cut(s) | 92, 167, 398, 409 |
| CviQI | GTAC | 2 cut(s) | 276, 508 |
| DpnI | GATC | 9 cut(s) | 57, 241, 381, 396, 402, 450, 489, 522, 555 |
| DpnII | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| EaeI | YGGCCR | 1 cut(s) | 713 |
| Eam1104I | CTCTTC | 3 cut(s) | 205, 313, 349 |
| EarI | CTCTTC | 3 cut(s) | 205, 313, 349 |
| Eco130I | CCWWGG | 1 cut(s) | 166 |
| Eco24I | GRGCYC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 1 cut(s) | 644 |
| Eco88I | CYCGRG | 1 cut(s) | 291 |
| Eco91I | GGTNACC | 1 cut(s) | 665 |
| EcoO65I | GGTNACC | 1 cut(s) | 665 |
| EcoT14I | CCWWGG | 1 cut(s) | 166 |
| EcoT22I | ATGCAT | 1 cut(s) | 93 |
| EcoT38I | GRGCYC | 1 cut(s) | 292 |
| ErhI | CCWWGG | 1 cut(s) | 166 |
| FaeI | CATG | 4 cut(s) | 95, 170, 401, 412 |
| FatI | CATG | 4 cut(s) | 91, 166, 397, 408 |
| FauI | CCCGC | 1 cut(s) | 119 |
| Fnu4HI | GCNGC | 1 cut(s) | 713 |
| FokI | GGATG | 2 cut(s) | 425, 614 |
| FriOI | GRGCYC | 1 cut(s) | 292 |
| Fsp4HI | GCNGC | 1 cut(s) | 713 |
| FspBI | CTAG | 3 cut(s) | 354, 531, 699 |
| GlaI | GCGC | 1 cut(s) | 434 |
| GluI | GCNGC | 1 cut(s) | 713 |
| GsaI | CCCAGC | 1 cut(s) | 515 |
| HaeII | RGCGCY | 1 cut(s) | 436 |
| HaeIII | GGCC | 3 cut(s) | 249, 684, 715 |
| HapII | CCGG | 1 cut(s) | 82 |
| HgaI | GACGC | 1 cut(s) | 11 |
| HhaI | GCGC | 1 cut(s) | 435 |
| Hin1I | GRCGYC | 1 cut(s) | 22 |
| Hin1II | CATG | 4 cut(s) | 95, 170, 401, 412 |
| Hin6I | GCGC | 1 cut(s) | 433 |
| HinP1I | GCGC | 1 cut(s) | 433 |
| HpaII | CCGG | 1 cut(s) | 82 |
| HphI | GGTGA | 2 cut(s) | 245, 530 |
| Hpy166II | GTNNAC | 1 cut(s) | 127 |
| Hpy188I | TCNGA | 1 cut(s) | 553 |
| Hpy188III | TCNNGA | 2 cut(s) | 293, 398 |
| Hpy8I | GTNNAC | 1 cut(s) | 127 |
| Hpy99I | CGWCG | 1 cut(s) | 63 |
| HpyAV | CCTTC | 2 cut(s) | 312, 630 |
| HpyCH4III | ACNGT | 2 cut(s) | 419, 671 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 91 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 216, 489, 681 |
| Hsp92I | GRCGYC | 1 cut(s) | 22 |
| Hsp92II | CATG | 4 cut(s) | 95, 170, 401, 412 |
| HspAI | GCGC | 1 cut(s) | 433 |
| KpnI | GGTACC | 1 cut(s) | 511 |
| Kzo9I | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| LmnI | GCTCC | 2 cut(s) | 480, 608 |
| LweI | GCATC | 2 cut(s) | 64, 78 |
| MaeI | CTAG | 3 cut(s) | 354, 531, 699 |
| MaeIII | GTNAC | 3 cut(s) | 500, 533, 665 |
| MalI | GATC | 9 cut(s) | 57, 241, 381, 396, 402, 450, 489, 522, 555 |
| MboI | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| MboII | GAAGA | 6 cut(s) | 83, 167, 192, 330, 336, 711 |
| MflI | RGATCY | 1 cut(s) | 239 |
| MhlI | GDGCHC | 2 cut(s) | 112, 292 |
| MluCI | AATT | 1 cut(s) | 101 |
| Mph1103I | ATGCAT | 1 cut(s) | 93 |
| MslI | CAYNNNNRTG | 1 cut(s) | 122 |
| MspA1I | CMGCKG | 1 cut(s) | 515 |
| MspI | CCGG | 1 cut(s) | 82 |
| MspR9I | CCNGG | 1 cut(s) | 83 |
| Mva1269I | GAATGC | 1 cut(s) | 263 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 216, 489, 681 |
| NciI | CCSGG | 1 cut(s) | 83 |
| NcoI | CCATGG | 1 cut(s) | 166 |
| NdeII | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| NlaIII | CATG | 4 cut(s) | 95, 170, 401, 412 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 482, 509 |
| NmuCI | GTSAC | 2 cut(s) | 500, 533 |
| NsiI | ATGCAT | 1 cut(s) | 93 |
| PaeR7I | CTCGAG | 1 cut(s) | 291 |
| PagI | TCATGA | 1 cut(s) | 397 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 25 |
| PctI | GAATGC | 1 cut(s) | 263 |
| PfoI | TCCNGGA | 1 cut(s) | 81 |
| PkrI | GCNGC | 1 cut(s) | 714 |
| PspEI | GGTNACC | 1 cut(s) | 665 |
| PspFI | CCCAGC | 1 cut(s) | 511 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 482, 509 |
| PspPI | GGNCC | 3 cut(s) | 247, 644, 683 |
| PsuI | RGATCY | 1 cut(s) | 239 |
| PvuII | CAGCTG | 1 cut(s) | 515 |
| RsaI | GTAC | 2 cut(s) | 277, 509 |
| RsaNI | GTAC | 2 cut(s) | 276, 508 |
| RseI | CAYNNNNRTG | 1 cut(s) | 122 |
| SatI | GCNGC | 1 cut(s) | 713 |
| Sau3AI | GATC | 9 cut(s) | 55, 239, 379, 394, 400, 448, 487, 520, 553 |
| Sau96I | GGNCC | 3 cut(s) | 247, 644, 683 |
| ScrFI | CCNGG | 1 cut(s) | 83 |
| SduI | GDGCHC | 2 cut(s) | 112, 292 |
| SfaNI | GCATC | 2 cut(s) | 64, 78 |
| SfcI | CTRYAG | 1 cut(s) | 172 |
| Sfr274I | CTCGAG | 1 cut(s) | 291 |
| SinI | GGWCC | 1 cut(s) | 644 |
| SlaI | CTCGAG | 1 cut(s) | 291 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 122 |
| SmlI | CTYRAG | 1 cut(s) | 291 |
| SmoI | CTYRAG | 1 cut(s) | 291 |
| Sse9I | AATT | 1 cut(s) | 101 |
| SsiI | CCGC | 4 cut(s) | 112, 694, 712, 730 |
| SspMI | CTAG | 3 cut(s) | 354, 531, 699 |
| StyD4I | CCNGG | 1 cut(s) | 81 |
| StyI | CCWWGG | 1 cut(s) | 166 |
| TaaI | ACNGT | 2 cut(s) | 419, 671 |
| TaqI | TCGA | 2 cut(s) | 58, 292 |
| TasI | AATT | 1 cut(s) | 101 |
| TauI | GCSGC | 1 cut(s) | 715 |
| TscAI | CASTG | 2 cut(s) | 505, 628 |
| TseFI | GTSAC | 2 cut(s) | 500, 533 |
| Tsp45I | GTSAC | 2 cut(s) | 500, 533 |
| TspDTI | ATGAA | 2 cut(s) | 270, 327 |
| TspGWI | ACGGA | 2 cut(s) | 112, 237 |
| TspRI | CASTG | 2 cut(s) | 505, 628 |
| VpaK11BI | GGWCC | 1 cut(s) | 644 |
| XhoI | CTCGAG | 1 cut(s) | 291 |
| XspI | CTAG | 3 cut(s) | 354, 531, 699 |
| Zsp2I | ATGCAT | 1 cut(s) | 93 |