mediator of RNA polymerase II transcription subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 485 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 866 |
| Acc36I | ACCTGC | 1 cut(s) | 485 |
| AccB1I | GGYRCC | 1 cut(s) | 1133 |
| AccI | GTMKAC | 2 cut(s) | 771, 870 |
| AciI | CCGC | 4 cut(s) | 394, 1137, 1251, 1439 |
| AcoI | YGGCCR | 2 cut(s) | 3, 278 |
| AcsI | RAATTY | 3 cut(s) | 920, 1290, 1451 |
| AcuI | CTGAAG | 2 cut(s) | 381, 445 |
| AfaI | GTAC | 4 cut(s) | 301, 628, 1321, 1381 |
| AgeI | ACCGGT | 1 cut(s) | 1517 |
| AgsI | TTSAA | 7 cut(s) | 260, 286, 671, 1145, 1195, 1412, 1565 |
| AluBI | AGCT | 5 cut(s) | 838, 1093, 1148, 1433, 1448 |
| AluI | AGCT | 5 cut(s) | 838, 1093, 1148, 1433, 1448 |
| Alw21I | GWGCWC | 1 cut(s) | 1435 |
| Alw26I | GTCTC | 5 cut(s) | 401, 643, 684, 848, 1501 |
| Ama87I | CYCGRG | 1 cut(s) | 1428 |
| AoxI | GGCC | 5 cut(s) | 3, 278, 508, 678, 1101 |
| ApeKI | GCWGC | 6 cut(s) | 170, 356, 545, 548, 1148, 1151 |
| ApoI | RAATTY | 3 cut(s) | 920, 1290, 1451 |
| AsiGI | ACCGGT | 1 cut(s) | 1517 |
| AspS9I | GGNCC | 2 cut(s) | 117, 1054 |
| AsuHPI | GGTGA | 9 cut(s) | 414, 436, 689, 719, 1201, 1240, 1291, 1379, 1415 |
| AvaI | CYCGRG | 1 cut(s) | 1428 |
| AvaII | GGWCC | 2 cut(s) | 117, 1054 |
| AxyI | CCTNAGG | 1 cut(s) | 1050 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 871, 904 |
| BalI | TGGCCA | 2 cut(s) | 5, 280 |
| BanI | GGYRCC | 1 cut(s) | 1133 |
| BanII | GRGCYC | 1 cut(s) | 1435 |
| BauI | CACGAG | 1 cut(s) | 912 |
| BbsI | GAAGAC | 1 cut(s) | 717 |
| Bbv12I | GWGCWC | 1 cut(s) | 1435 |
| BbvI | GCAGC | 6 cut(s) | 182, 343, 532, 560, 1135, 1163 |
| BccI | CCATC | 3 cut(s) | 133, 560, 1304 |
| BclI | TGATCA | 1 cut(s) | 79 |
| BcoDI | GTCTC | 5 cut(s) | 401, 643, 684, 848, 1501 |
| BfaI | CTAG | 3 cut(s) | 780, 1041, 1172 |
| BfmI | CTRYAG | 5 cut(s) | 546, 1067, 1122, 1149, 1383 |
| BfuAI | ACCTGC | 1 cut(s) | 485 |
| BglII | AGATCT | 1 cut(s) | 1575 |
| BisI | GCNGC | 8 cut(s) | 171, 357, 546, 549, 1137, 1149, 1152, 1251 |
| BlsI | GCNGC | 8 cut(s) | 172, 358, 547, 550, 1138, 1150, 1153, 1252 |
| BmcAI | AGTACT | 1 cut(s) | 1381 |
| Bme18I | GGWCC | 2 cut(s) | 117, 1054 |
| BmeT110I | CYCGRG | 1 cut(s) | 1428 |
| BmgT120I | GGNCC | 2 cut(s) | 117, 1054 |
| BmiI | GGNNCC | 3 cut(s) | 963, 1135, 1169 |
| BmsI | GCATC | 6 cut(s) | 157, 205, 381, 481, 976, 1465 |
| BpiI | GAAGAC | 1 cut(s) | 717 |
| BpuEI | CTTGAG | 3 cut(s) | 773, 1177, 1510 |
| Bsa29I | ATCGAT | 1 cut(s) | 891 |
| BsaAI | YACGTR | 1 cut(s) | 524 |
| BsaBI | GATNNNNATC | 1 cut(s) | 524 |
| BsaI | GGTCTC | 1 cut(s) | 401 |
| BsaJI | CCNNGG | 2 cut(s) | 700, 1277 |
| BsaWI | WCCGGW | 2 cut(s) | 114, 1517 |
| Bse118I | RCCGGY | 2 cut(s) | 506, 1517 |
| Bse1I | ACTGG | 1 cut(s) | 425 |
| Bse21I | CCTNAGG | 1 cut(s) | 1050 |
| Bse8I | GATNNNNATC | 1 cut(s) | 524 |
| BseCI | ATCGAT | 1 cut(s) | 891 |
| BseDI | CCNNGG | 2 cut(s) | 700, 1277 |
| BseGI | GGATG | 2 cut(s) | 640, 1108 |
| BseJI | GATNNNNATC | 1 cut(s) | 524 |
| BseMII | CTCAG | 1 cut(s) | 843 |
| BseNI | ACTGG | 1 cut(s) | 425 |
| BseXI | GCAGC | 6 cut(s) | 182, 343, 532, 560, 1135, 1163 |
| BshFI | GGCC | 5 cut(s) | 5, 280, 510, 680, 1103 |
| BshNI | GGYRCC | 1 cut(s) | 1133 |
| BshTI | ACCGGT | 1 cut(s) | 1517 |
| BshVI | ATCGAT | 1 cut(s) | 891 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1435 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1428 |
| BsiSI | CCGG | 3 cut(s) | 115, 507, 1518 |
| BsmAI | GTCTC | 5 cut(s) | 401, 643, 684, 848, 1501 |
| BsnI | GGCC | 5 cut(s) | 5, 280, 510, 680, 1103 |
| Bso31I | GGTCTC | 1 cut(s) | 401 |
| BsoBI | CYCGRG | 1 cut(s) | 1428 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1435 |
| Bsp143I | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| BspACI | CCGC | 4 cut(s) | 394, 1137, 1251, 1439 |
| BspANI | GGCC | 5 cut(s) | 5, 280, 510, 680, 1103 |
| BspCNI | CTCAG | 1 cut(s) | 844 |
| BspDI | ATCGAT | 1 cut(s) | 891 |
| BspHI | TCATGA | 1 cut(s) | 186 |
| BspLI | GGNNCC | 3 cut(s) | 963, 1135, 1169 |
| BspMAI | CTGCAG | 3 cut(s) | 550, 1153, 1387 |
| BspMI | ACCTGC | 1 cut(s) | 485 |
| BspT107I | GGYRCC | 1 cut(s) | 1133 |
| BspTNI | GGTCTC | 1 cut(s) | 401 |
| BsrFI | RCCGGY | 2 cut(s) | 506, 1517 |
| BsrI | ACTGG | 1 cut(s) | 425 |
| BssAI | RCCGGY | 2 cut(s) | 506, 1517 |
| BssECI | CCNNGG | 2 cut(s) | 700, 1277 |
| BssMI | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| BssSI | CACGAG | 1 cut(s) | 912 |
| BssT1I | CCWWGG | 2 cut(s) | 700, 1277 |
| Bst2BI | CACGAG | 1 cut(s) | 912 |
| Bst4CI | ACNGT | 4 cut(s) | 448, 875, 1342, 1547 |
| BstBAI | YACGTR | 1 cut(s) | 524 |
| BstC8I | GCNNGC | 2 cut(s) | 453, 508 |
| BstDEI | CTNAG | 3 cut(s) | 797, 852, 1050 |
| BstF5I | GGATG | 2 cut(s) | 640, 1108 |
| BstKTI | GATC | 6 cut(s) | 82, 106, 148, 291, 721, 1578 |
| BstMAI | GTCTC | 5 cut(s) | 401, 643, 684, 848, 1501 |
| BstMBI | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 554, 1133, 1145, 1445 |
| BstSFI | CTRYAG | 5 cut(s) | 546, 1067, 1122, 1149, 1383 |
| BstSNI | TACGTA | 1 cut(s) | 524 |
| BstV1I | GCAGC | 6 cut(s) | 182, 343, 532, 560, 1135, 1163 |
| BstV2I | GAAGAC | 1 cut(s) | 717 |
| BstX2I | RGATCY | 1 cut(s) | 1575 |
| BstYI | RGATCY | 1 cut(s) | 1575 |
| Bsu15I | ATCGAT | 1 cut(s) | 891 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1050 |
| BsuRI | GGCC | 5 cut(s) | 5, 280, 510, 680, 1103 |
| BsuTUI | ATCGAT | 1 cut(s) | 891 |
| BtgZI | GCGATG | 1 cut(s) | 538 |
| BtsCI | GGATG | 2 cut(s) | 640, 1108 |
| BtsI | GCAGTG | 1 cut(s) | 501 |
| BtsIMutI | CAGTG | 4 cut(s) | 141, 432, 501, 1552 |
| BveI | ACCTGC | 1 cut(s) | 485 |
| Cac8I | GCNNGC | 2 cut(s) | 453, 508 |
| CciI | TCATGA | 1 cut(s) | 186 |
| Cfr10I | RCCGGY | 2 cut(s) | 506, 1517 |
| Cfr13I | GGNCC | 2 cut(s) | 117, 1054 |
| ClaI | ATCGAT | 1 cut(s) | 891 |
| CseI | GACGC | 2 cut(s) | 997, 1116 |
| Csp6I | GTAC | 4 cut(s) | 300, 627, 1320, 1380 |
| CspAI | ACCGGT | 1 cut(s) | 1517 |
| CviAII | CATG | 7 cut(s) | 23, 83, 187, 268, 316, 994, 1013 |
| CviQI | GTAC | 4 cut(s) | 300, 627, 1320, 1380 |
| DdeI | CTNAG | 3 cut(s) | 797, 852, 1050 |
| DpnI | GATC | 6 cut(s) | 81, 105, 147, 290, 720, 1577 |
| DpnII | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 866 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 866 |
| EaeI | YGGCCR | 2 cut(s) | 3, 278 |
| Ecl136II | GAGCTC | 1 cut(s) | 1433 |
| Eco105I | TACGTA | 1 cut(s) | 524 |
| Eco130I | CCWWGG | 2 cut(s) | 700, 1277 |
| Eco24I | GRGCYC | 1 cut(s) | 1435 |
| Eco31I | GGTCTC | 1 cut(s) | 401 |
| Eco47I | GGWCC | 2 cut(s) | 117, 1054 |
| Eco53kI | GAGCTC | 1 cut(s) | 1433 |
| Eco57I | CTGAAG | 2 cut(s) | 381, 445 |
| Eco81I | CCTNAGG | 1 cut(s) | 1050 |
| Eco88I | CYCGRG | 1 cut(s) | 1428 |
| EcoICRI | GAGCTC | 1 cut(s) | 1433 |
| EcoRI | GAATTC | 1 cut(s) | 1290 |
| EcoT14I | CCWWGG | 2 cut(s) | 700, 1277 |
| EcoT38I | GRGCYC | 1 cut(s) | 1435 |
| ErhI | CCWWGG | 2 cut(s) | 700, 1277 |
| FaeI | CATG | 7 cut(s) | 26, 86, 190, 271, 319, 997, 1016 |
| FatI | CATG | 7 cut(s) | 22, 82, 186, 267, 315, 993, 1012 |
| FauI | CCCGC | 2 cut(s) | 387, 1432 |
| FbaI | TGATCA | 1 cut(s) | 79 |
| FblI | GTMKAC | 2 cut(s) | 771, 870 |
| Fnu4HI | GCNGC | 8 cut(s) | 171, 357, 546, 549, 1137, 1149, 1152, 1251 |
| FokI | GGATG | 2 cut(s) | 647, 1095 |
| FriOI | GRGCYC | 1 cut(s) | 1435 |
| Fsp4HI | GCNGC | 8 cut(s) | 171, 357, 546, 549, 1137, 1149, 1152, 1251 |
| FspBI | CTAG | 3 cut(s) | 780, 1041, 1172 |
| GluI | GCNGC | 8 cut(s) | 171, 357, 546, 549, 1137, 1149, 1152, 1251 |
| HaeIII | GGCC | 5 cut(s) | 5, 280, 510, 680, 1103 |
| HapII | CCGG | 3 cut(s) | 115, 507, 1518 |
| HgaI | GACGC | 2 cut(s) | 997, 1116 |
| Hin1II | CATG | 7 cut(s) | 26, 86, 190, 271, 319, 997, 1016 |
| HincII | GTYRAC | 2 cut(s) | 772, 871 |
| HindII | GTYRAC | 2 cut(s) | 772, 871 |
| HindIII | AAGCTT | 1 cut(s) | 836 |
| HinfI | GANTC | 3 cut(s) | 1044, 1234, 1273 |
| HpaII | CCGG | 3 cut(s) | 115, 507, 1518 |
| HphI | GGTGA | 9 cut(s) | 414, 436, 689, 719, 1201, 1240, 1291, 1379, 1415 |
| Hpy166II | GTNNAC | 4 cut(s) | 733, 772, 871, 1515 |
| Hpy188I | TCNGA | 4 cut(s) | 345, 406, 853, 1580 |
| Hpy188III | TCNNGA | 8 cut(s) | 31, 149, 187, 286, 878, 1041, 1112, 1489 |
| Hpy8I | GTNNAC | 4 cut(s) | 733, 772, 871, 1515 |
| HpyAV | CCTTC | 4 cut(s) | 568, 670, 1081, 1559 |
| HpyCH4III | ACNGT | 4 cut(s) | 448, 875, 1342, 1547 |
| HpyCH4IV | ACGT | 2 cut(s) | 475, 523 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 554, 1133, 1145, 1445 |
| HpyF3I | CTNAG | 3 cut(s) | 797, 852, 1050 |
| HpySE526I | ACGT | 2 cut(s) | 475, 523 |
| Hsp92II | CATG | 7 cut(s) | 26, 86, 190, 271, 319, 997, 1016 |
| KroI | GCCGGC | 1 cut(s) | 506 |
| KroNI | GCCGGC | 1 cut(s) | 508 |
| Ksp22I | TGATCA | 1 cut(s) | 79 |
| Kzo9I | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| LmnI | GCTCC | 3 cut(s) | 961, 1090, 1438 |
| Lsp1109I | GCAGC | 6 cut(s) | 182, 343, 532, 560, 1135, 1163 |
| LweI | GCATC | 6 cut(s) | 157, 205, 381, 481, 976, 1465 |
| MaeI | CTAG | 3 cut(s) | 780, 1041, 1172 |
| MaeII | ACGT | 2 cut(s) | 475, 523 |
| MaeIII | GTNAC | 4 cut(s) | 499, 1062, 1207, 1547 |
| MalI | GATC | 6 cut(s) | 81, 105, 147, 290, 720, 1577 |
| MboI | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| MboII | GAAGA | 8 cut(s) | 23, 374, 442, 722, 889, 995, 1243, 1566 |
| MflI | RGATCY | 1 cut(s) | 1575 |
| MhlI | GDGCHC | 1 cut(s) | 1435 |
| MlsI | TGGCCA | 2 cut(s) | 5, 280 |
| MluCI | AATT | 7 cut(s) | 350, 749, 920, 1290, 1451, 1533, 1569 |
| MluNI | TGGCCA | 2 cut(s) | 5, 280 |
| MnlI | CCTC | 8 cut(s) | 147, 588, 698, 750, 1111, 1224, 1357, 1437 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 280 |
| MroNI | GCCGGC | 1 cut(s) | 506 |
| MscI | TGGCCA | 2 cut(s) | 5, 280 |
| MseI | TTAA | 6 cut(s) | 177, 294, 753, 902, 1080, 1185 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1113, 1473 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 280 |
| MspI | CCGG | 3 cut(s) | 115, 507, 1518 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 554, 1133, 1145, 1445 |
| NaeI | GCCGGC | 1 cut(s) | 508 |
| NdeII | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| NgoMIV | GCCGGC | 1 cut(s) | 506 |
| NlaIII | CATG | 7 cut(s) | 26, 86, 190, 271, 319, 997, 1016 |
| NlaIV | GGNNCC | 3 cut(s) | 963, 1135, 1169 |
| NmuCI | GTSAC | 3 cut(s) | 499, 1207, 1547 |
| PaeR7I | CTCGAG | 1 cut(s) | 1428 |
| PagI | TCATGA | 1 cut(s) | 186 |
| PaqCI | CACCTGC | 1 cut(s) | 485 |
| PdiI | GCCGGC | 1 cut(s) | 508 |
| PfeI | GAWTC | 3 cut(s) | 1044, 1234, 1273 |
| PinAI | ACCGGT | 1 cut(s) | 1517 |
| PkrI | GCNGC | 8 cut(s) | 172, 358, 547, 550, 1138, 1150, 1153, 1252 |
| Ppu21I | YACGTR | 1 cut(s) | 524 |
| Psp124BI | GAGCTC | 1 cut(s) | 1435 |
| PspN4I | GGNNCC | 3 cut(s) | 963, 1135, 1169 |
| PspPI | GGNCC | 2 cut(s) | 117, 1054 |
| PspXI | VCTCGAGB | 1 cut(s) | 1428 |
| PstI | CTGCAG | 3 cut(s) | 550, 1153, 1387 |
| PsuI | RGATCY | 1 cut(s) | 1575 |
| RsaI | GTAC | 4 cut(s) | 301, 628, 1321, 1381 |
| RsaNI | GTAC | 4 cut(s) | 300, 627, 1320, 1380 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1113, 1473 |
| SacI | GAGCTC | 1 cut(s) | 1435 |
| SalI | GTCGAC | 2 cut(s) | 770, 869 |
| SaqAI | TTAA | 6 cut(s) | 177, 294, 753, 902, 1080, 1185 |
| SatI | GCNGC | 8 cut(s) | 171, 357, 546, 549, 1137, 1149, 1152, 1251 |
| Sau3AI | GATC | 6 cut(s) | 79, 103, 145, 288, 718, 1575 |
| Sau96I | GGNCC | 2 cut(s) | 117, 1054 |
| ScaI | AGTACT | 1 cut(s) | 1381 |
| SduI | GDGCHC | 1 cut(s) | 1435 |
| SfaNI | GCATC | 6 cut(s) | 157, 205, 381, 481, 976, 1465 |
| SfcI | CTRYAG | 5 cut(s) | 546, 1067, 1122, 1149, 1383 |
| Sfr274I | CTCGAG | 1 cut(s) | 1428 |
| SinI | GGWCC | 2 cut(s) | 117, 1054 |
| SlaI | CTCGAG | 1 cut(s) | 1428 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1113, 1473 |
| SmlI | CTYRAG | 4 cut(s) | 788, 1156, 1428, 1489 |
| SmoI | CTYRAG | 4 cut(s) | 788, 1156, 1428, 1489 |
| SnaBI | TACGTA | 1 cut(s) | 524 |
| Sse9I | AATT | 7 cut(s) | 350, 749, 920, 1290, 1451, 1533, 1569 |
| SsiI | CCGC | 4 cut(s) | 394, 1137, 1251, 1439 |
| SspMI | CTAG | 3 cut(s) | 780, 1041, 1172 |
| SstI | GAGCTC | 1 cut(s) | 1435 |
| StyI | CCWWGG | 2 cut(s) | 700, 1277 |
| TaaI | ACNGT | 4 cut(s) | 448, 875, 1342, 1547 |
| TaiI | ACGT | 2 cut(s) | 478, 526 |
| TaqI | TCGA | 6 cut(s) | 717, 771, 870, 891, 924, 1429 |
| TasI | AATT | 7 cut(s) | 350, 749, 920, 1290, 1451, 1533, 1569 |
| TatI | WGTACW | 2 cut(s) | 1319, 1379 |
| TauI | GCSGC | 2 cut(s) | 1139, 1253 |
| TfiI | GAWTC | 3 cut(s) | 1044, 1234, 1273 |
| Tru1I | TTAA | 6 cut(s) | 177, 294, 753, 902, 1080, 1185 |
| Tru9I | TTAA | 6 cut(s) | 177, 294, 753, 902, 1080, 1185 |
| TscAI | CASTG | 4 cut(s) | 148, 432, 508, 1552 |
| TseFI | GTSAC | 3 cut(s) | 499, 1207, 1547 |
| TseI | GCWGC | 6 cut(s) | 170, 356, 545, 548, 1148, 1151 |
| Tsp45I | GTSAC | 3 cut(s) | 499, 1207, 1547 |
| TspDTI | ATGAA | 5 cut(s) | 284, 549, 831, 1097, 1457 |
| TspRI | CASTG | 4 cut(s) | 148, 432, 508, 1552 |
| VpaK11BI | GGWCC | 2 cut(s) | 117, 1054 |
| XapI | RAATTY | 3 cut(s) | 920, 1290, 1451 |
| XbaI | TCTAGA | 1 cut(s) | 1040 |
| XhoI | CTCGAG | 1 cut(s) | 1428 |
| XmiI | GTMKAC | 2 cut(s) | 771, 870 |
| XspI | CTAG | 3 cut(s) | 780, 1041, 1172 |
| ZrmI | AGTACT | 1 cut(s) | 1381 |