MD04G1125600.v1.1
HSP70 Family

Hsp70 protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
21210771 .. 21213773
3003 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1125600.v1.1.491

Sequence Viewer

Length: 1710 bp
ATGGCCGGTAAGGGAGAAGGTCCGGCCATCGGAATTGATCTTGGCACTACATACTCATGCGTCGGTGTTTGGCAACACGACCGTGTAGAGATCATCGCCAACGACCAGGGTAACAGAACCACCCCGTCGTACGTTGCTTTCACTGATACCGAGCGGTTGATCGGAGATGCCGCTAAGAATCAGGTCGCCATGAACCCCATTAACACCGTCTTCGATGCTAAGAGGTTGATTGGTCGTAGAATTTCTGATGCCTCTGTCCAGAGCGACATGAAGTTGTGGCCATTCAAGGTTACCTCCGGCCCTGGTGACAAGCCCATGATCGGAGTCTCCTACAAGGGAGAAGACAAGCTCTTTGCCGCTGAGGAAATCTCGTCTATGGTCCTCATCAAGATGCGTGAGATCGCCGAGGCCTACCTTGGCAGCACCATCAAGAACGCTGTTGCCACAGCCGGTGACACCCATTTGGGAGGAGAAGATTTTGACAACAGAATGGTGAACCATTTCGTTCAGGAGTTCAAGAGGAAGAATAAGAAGGATATCAGCGGCAACCCCAGAGCCCTCAGGAGGTTGAGGACATCTTGCGAAAGGGCGAAGAGAACCCTCTCTTCCACCGCTCAGACCACCATTGAAATTGACTCCCTTTACGAGGGTATCGATTTCTACTCCACCATCACCCGTGCCAGATTTGAGGAGTTGAACATGGATCTTTTCAGGAAGTGTATGGAGCCAGTTGAGAAATGTTTGAGGGATGCCAAGATGGACAAGAGCACCGTCCACGATGTCGTTCTTGTTGGAGGATCCACCCGTATTCCTAAAGTACAGCAGCTTCTTCAGGACTTCTTCAACGGCAAGGAGCTCTGCAAGAGCATCAACCCTGATGAGGCTGTCGCCTATGGTGCTGCCGTCCAGGCTGCCATTCTCAGCGGAGAGGGCAACGAGAAGGTCCAGGACCTTCTTCTGTTGGATGTTACCCCTCTTTCCCTCGGATTGGAAACCGCCGGAGGTGTCATGACTGTGTTGATCCCCAGAAACACCACCATCCCCACCAAGAAGGAACAGGTCTTCTCAACCTACTCCGACAACCAGCCCGGAGTCTTGATTCAGGTGTATGAAGGAGAAAGAACCAGAACCAGGGACAACAACTTGCTCGGAAAGTTTGAGCTCTCCGGAATCCCACCTGCACCCAGAGGAGTACCCCAGATCACTGTCTGCTTCGACATTGACGCTAACGGTATCTTGAATGTCTCCGCCGAGGACAAGACCACCGGACAAAAGAACAAGATCACAATCACCAACGACAAGGGCAGGTTGTCCAAGGAGGAGATTGAGAAGATGGTTCAGGAGGCCGAGAAGTACAAGTCGGAGGACGAAGAGCACAAGAAGAAGGTTGAGAGCAAGAACGCCTTGGAGAACTATGCCTACAACATGAGGAACACCATCAAGGACGAGAAGATTGGGGCCAAGCTGCCGCCGGCCGACAAGAAGAAGATCGAAGACTCGATCGAGACTGCCATCCAATGGTTGGACAGCAACCAGCTGGCGGAGGCCGATGAGTTTGAAGACAAGATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCCAAGATGTACCAGGGAGCTGGGGGCGAAGGTGCCGGCCCAGTTGATGATGATGATGCTCCACCTAGTGCCAGCGGCCCAGGCCCCAAGATCGAGGAGGTCGACTAA
Functional Annotation

Protein Analysis

570

Amino Acids

62.67

Weight (kDa)

5.18

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 149 4.2e-54 Hsp70 protein
HSP70 PF00012 147 - 539 3.5e-149 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1186
Acc36I ACCTGC 2 cut(s) 1186, 1296
AccB1I GGYRCC 1 cut(s) 1634
AccB7I CCANNNNNTGG 2 cut(s) 1518, 1522
AccBSI CCGCTC 2 cut(s) 154, 614
AccI GTMKAC 1 cut(s) 1704
AccIII TCCGGA 1 cut(s) 1166
AclWI GGATC 4 cut(s) 711, 792, 805, 1015
AcoI YGGCCR 4 cut(s) 3, 24, 278, 1473
AcsI RAATTY 1 cut(s) 240
AcuI CTGAAG 1 cut(s) 815
AdeI CACNNNGTG 1 cut(s) 1670
AfaI GTAC 5 cut(s) 131, 819, 1194, 1355, 1613
AgsI TTSAA 7 cut(s) 286, 517, 629, 697, 844, 1240, 1559
AjnI CCWGG 7 cut(s) 105, 301, 906, 945, 1130, 1614, 1681
AleI CACNNNNGTG 1 cut(s) 81
AluBI AGCT 7 cut(s) 349, 826, 856, 1162, 1465, 1537, 1622
AluI AGCT 7 cut(s) 349, 826, 856, 1162, 1465, 1537, 1622
Alw21I GWGCWC 4 cut(s) 770, 858, 1164, 1377
Alw26I GTCTC 3 cut(s) 331, 1249, 1499
AlwI GGATC 4 cut(s) 711, 792, 805, 1015
Aor13HI TCCGGA 1 cut(s) 1166
ApeKI GCWGC 5 cut(s) 420, 823, 899, 911, 1465
ApoI RAATTY 1 cut(s) 240
ArsI GACNNNNNNTTYG 2 cut(s) 335, 367
Asp700I GAANNNNTTC 1 cut(s) 500
AspS9I GGNCC 9 cut(s) 20, 299, 379, 943, 949, 1458, 1640, 1679, 1685
AsuC2I CCSGG 1 cut(s) 1089
AsuHPI GGTGA 5 cut(s) 317, 464, 505, 664, 1282
AvaII GGWCC 4 cut(s) 20, 379, 943, 949
AxyI CCTNAGG 1 cut(s) 560
BaeI ACNNNNGTAYC 2 cut(s) 634, 667
BalI TGGCCA 1 cut(s) 280
BamHI GGATCC 1 cut(s) 797
BanI GGYRCC 1 cut(s) 1634
BanII GRGCYC 3 cut(s) 559, 858, 1164
BarI GAAGNNNNNNTAC 2 cut(s) 810, 842
BbsI GAAGAC 5 cut(s) 202, 348, 1054, 1500, 1566
Bbv12I GWGCWC 4 cut(s) 770, 858, 1164, 1377
BbvCI CCTCAGC 1 cut(s) 360
BbvI GCAGC 5 cut(s) 432, 835, 886, 898, 1452
BccI CCATC 8 cut(s) 35, 434, 677, 751, 1046, 1327, 1445, 1520
BceAI ACGGC 2 cut(s) 862, 887
BciT130I CCWGG 7 cut(s) 107, 303, 908, 947, 1132, 1616, 1683
BcnI CCSGG 1 cut(s) 1089
BcoDI GTCTC 3 cut(s) 331, 1249, 1499
BfaI CTAG 1 cut(s) 1668
BfuAI ACCTGC 2 cut(s) 1186, 1296
BglI GCCNNNNNGGC 1 cut(s) 908
Bme1390I CCNGG 8 cut(s) 107, 303, 908, 947, 1089, 1132, 1616, 1683
Bme18I GGWCC 4 cut(s) 20, 379, 943, 949
BmgT120I GGNCC 9 cut(s) 20, 299, 379, 943, 949, 1458, 1640, 1679, 1685
BmiI GGNNCC 5 cut(s) 726, 799, 1459, 1636, 1687
BmrFI CCNGG 8 cut(s) 107, 303, 908, 947, 1089, 1132, 1616, 1683
BmrI ACTGGG 1 cut(s) 1637
BmsI GCATC 8 cut(s) 157, 205, 238, 381, 739, 876, 1593, 1648
BmuI ACTGGG 1 cut(s) 1637
BpiI GAAGAC 5 cut(s) 202, 348, 1054, 1500, 1566
BplI GAGNNNNNCTC 2 cut(s) 353, 385
Bpu10I CCTNAGC 1 cut(s) 360
BpuMI CCSGG 1 cut(s) 1089
Bsa29I ATCGAT 1 cut(s) 654
BsaBI GATNNNNATC 1 cut(s) 1286
BsaWI WCCGGW 2 cut(s) 1166, 1265
Bse118I RCCGGY 4 cut(s) 5, 449, 1471, 1637
Bse1I ACTGG 2 cut(s) 728, 1643
Bse21I CCTNAGG 1 cut(s) 560
Bse8I GATNNNNATC 1 cut(s) 1286
BseAI TCCGGA 1 cut(s) 1166
BseBI CCWGG 7 cut(s) 107, 303, 908, 947, 1132, 1616, 1683
BseCI ATCGAT 1 cut(s) 654
BseGI GGATG 4 cut(s) 754, 970, 1038, 1512
BseJI GATNNNNATC 1 cut(s) 1286
BseMII CTCAG 4 cut(s) 351, 574, 629, 934
BseNI ACTGG 2 cut(s) 728, 1643
BseRI GAGGAG 4 cut(s) 483, 704, 1203, 1334
BseX3I CGGCCG 1 cut(s) 1473
BseXI GCAGC 5 cut(s) 432, 835, 886, 898, 1452
BseYI CCCAGC 1 cut(s) 1622
BsgI GTGCAG 1 cut(s) 1164
Bsh1285I CGRYCG 3 cut(s) 82, 1476, 1503
BshNI GGYRCC 1 cut(s) 1634
BshVI ATCGAT 1 cut(s) 654
BsiEI CGRYCG 3 cut(s) 82, 1476, 1503
BsiHKAI GWGCWC 4 cut(s) 770, 858, 1164, 1377
BsiWI CGTACG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 1148
BsmAI GTCTC 3 cut(s) 331, 1249, 1499
BsmFI GGGAC 1 cut(s) 1148
Bsp1286I GDGCHC 5 cut(s) 559, 770, 858, 1164, 1377
Bsp13I TCCGGA 1 cut(s) 1166
BspCNI CTCAG 4 cut(s) 352, 573, 628, 933
BspDI ATCGAT 1 cut(s) 654
BspEI TCCGGA 1 cut(s) 1166
BspHI TCATGA 1 cut(s) 1008
BspLI GGNNCC 5 cut(s) 726, 799, 1459, 1636, 1687
BspMI ACCTGC 2 cut(s) 1186, 1296
BspPI GGATC 4 cut(s) 711, 792, 805, 1015
BspQI GCTCTTC 1 cut(s) 1365
BspT107I GGYRCC 1 cut(s) 1634
BsrBI CCGCTC 2 cut(s) 154, 614
BsrFI RCCGGY 4 cut(s) 5, 449, 1471, 1637
BsrI ACTGG 2 cut(s) 728, 1643
BssAI RCCGGY 4 cut(s) 5, 449, 1471, 1637
BssT1I CCWWGG 3 cut(s) 415, 1314, 1404
Bst2UI CCWGG 7 cut(s) 107, 303, 908, 947, 1132, 1616, 1683
Bst4CI ACNGT 6 cut(s) 83, 208, 772, 1015, 1207, 1232
Bst6I CTCTTC 3 cut(s) 587, 610, 1365
BstC8I GCNNGC 4 cut(s) 1473, 1539, 1639, 1675
BstDEI CTNAG 6 cut(s) 174, 219, 360, 560, 615, 920
BstEII GGTNACC 1 cut(s) 289
BstENI CCTNNNNNAGG 1 cut(s) 644
BstF5I GGATG 4 cut(s) 754, 970, 1038, 1512
BstMAI GTCTC 3 cut(s) 331, 1249, 1499
BstMCI CGRYCG 3 cut(s) 82, 1476, 1503
BstMWI GCNNNNNNNGC 4 cut(s) 896, 908, 930, 1683
BstNI CCWGG 7 cut(s) 107, 303, 908, 947, 1132, 1616, 1683
BstPI GGTNACC 1 cut(s) 289
BstSCI CCNGG 8 cut(s) 105, 301, 906, 945, 1087, 1130, 1614, 1681
BstV1I GCAGC 5 cut(s) 432, 835, 886, 898, 1452
BstV2I GAAGAC 5 cut(s) 202, 348, 1054, 1500, 1566
BstX2I RGATCY 2 cut(s) 703, 797
BstXI CCANNNNNNTGG 1 cut(s) 1622
BstYI RGATCY 2 cut(s) 703, 797
BstZI CGGCCG 1 cut(s) 1473
Bsu15I ATCGAT 1 cut(s) 654
Bsu36I CCTNAGG 1 cut(s) 560
BsuTUI ATCGAT 1 cut(s) 654
BtgZI GCGATG 2 cut(s) 79, 1585
BtsCI GGATG 4 cut(s) 754, 970, 1038, 1512
BtsIMutI CAGTG 2 cut(s) 141, 1203
BveI ACCTGC 2 cut(s) 1186, 1296
Cac8I GCNNGC 4 cut(s) 1473, 1539, 1639, 1675
CciI TCATGA 1 cut(s) 1008
Cfr10I RCCGGY 4 cut(s) 5, 449, 1471, 1637
Cfr13I GGNCC 9 cut(s) 20, 299, 379, 943, 949, 1458, 1640, 1679, 1685
ClaI ATCGAT 1 cut(s) 654
CseI GACGC 2 cut(s) 49, 1232
Csp6I GTAC 5 cut(s) 130, 818, 1193, 1354, 1612
CviAII CATG 7 cut(s) 57, 190, 268, 316, 700, 1009, 1426
CviQI GTAC 5 cut(s) 130, 818, 1193, 1354, 1612
DdeI CTNAG 6 cut(s) 174, 219, 360, 560, 615, 920
DraIII CACNNNGTG 1 cut(s) 1670
EaeI YGGCCR 4 cut(s) 3, 24, 278, 1473
EagI CGGCCG 1 cut(s) 1473
Eam1104I CTCTTC 3 cut(s) 587, 610, 1365
EarI CTCTTC 3 cut(s) 587, 610, 1365
EciI GGCGGA 2 cut(s) 1237, 1556
Ecl136II GAGCTC 2 cut(s) 856, 1162
EclXI CGGCCG 1 cut(s) 1473
Eco130I CCWWGG 3 cut(s) 415, 1314, 1404
Eco147I AGGCCT 1 cut(s) 410
Eco24I GRGCYC 3 cut(s) 559, 858, 1164
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 4 cut(s) 20, 379, 943, 949
Eco52I CGGCCG 1 cut(s) 1473
Eco53kI GAGCTC 2 cut(s) 856, 1162
Eco57I CTGAAG 1 cut(s) 815
Eco81I CCTNAGG 1 cut(s) 560
Eco91I GGTNACC 1 cut(s) 289
EcoICRI GAGCTC 2 cut(s) 856, 1162
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoO109I RGGNCCY 2 cut(s) 949, 1685
EcoO65I GGTNACC 1 cut(s) 289
EcoRII CCWGG 7 cut(s) 105, 301, 906, 945, 1130, 1614, 1681
EcoRV GATATC 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 415, 1314, 1404
EcoT38I GRGCYC 3 cut(s) 559, 858, 1164
ErhI CCWWGG 3 cut(s) 415, 1314, 1404
FaeI CATG 7 cut(s) 60, 193, 271, 319, 703, 1012, 1429
FalI AAGNNNNNCTT 2 cut(s) 1388, 1420
FaqI GGGAC 1 cut(s) 1148
FatI CATG 7 cut(s) 56, 189, 267, 315, 699, 1008, 1425
FblI GTMKAC 1 cut(s) 1704
FokI GGATG 4 cut(s) 761, 977, 1025, 1499
FriOI GRGCYC 3 cut(s) 559, 858, 1164
FspBI CTAG 1 cut(s) 1668
GsaI CCCAGC 1 cut(s) 1626
HgaI GACGC 2 cut(s) 49, 1232
Hin1II CATG 7 cut(s) 60, 193, 271, 319, 703, 1012, 1429
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HinfI GANTC 7 cut(s) 178, 324, 635, 1092, 1099, 1170, 1496
HphI GGTGA 5 cut(s) 317, 464, 505, 664, 1282
Hpy166II GTNNAC 3 cut(s) 496, 775, 1705
Hpy188I TCNGA 9 cut(s) 32, 164, 247, 323, 618, 986, 1078, 1151, 1363
Hpy8I GTNNAC 3 cut(s) 496, 775, 1705
Hpy99I CGWCG 2 cut(s) 65, 130
HpyAV CCTTC 9 cut(s) 11, 526, 934, 962, 1045, 1106, 1378, 1564, 1625
HpyCH4III ACNGT 6 cut(s) 83, 208, 772, 1015, 1207, 1232
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 3 cut(s) 861, 1181, 1590
HpyF10VI GCNNNNNNNGC 4 cut(s) 896, 908, 930, 1683
HpyF3I CTNAG 6 cut(s) 174, 219, 360, 560, 615, 920
HpySE526I ACGT 1 cut(s) 132
Hsp92II CATG 7 cut(s) 60, 193, 271, 319, 703, 1012, 1429
Kpn2I TCCGGA 1 cut(s) 1166
KroI GCCGGC 2 cut(s) 1471, 1637
KroNI GCCGGC 2 cut(s) 1473, 1639
LguI GCTCTTC 1 cut(s) 1365
LmnI GCTCC 4 cut(s) 724, 853, 1619, 1666
Lsp1109I GCAGC 5 cut(s) 432, 835, 886, 898, 1452
LweI GCATC 8 cut(s) 157, 205, 238, 381, 739, 876, 1593, 1648
MaeI CTAG 1 cut(s) 1668
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 5 cut(s) 110, 289, 305, 452, 967
MbiI CCGCTC 2 cut(s) 154, 614
MflI RGATCY 2 cut(s) 703, 797
MhlI GDGCHC 5 cut(s) 559, 770, 858, 1164, 1377
MlsI TGGCCA 1 cut(s) 280
MluCI AATT 3 cut(s) 33, 240, 630
MluNI TGGCCA 1 cut(s) 280
MlyI GAGTC 4 cut(s) 333, 629, 1101, 1490
MmeI TCCRAC 6 cut(s) 772, 942, 1101, 1341, 1503, 1557
Mox20I TGGCCA 1 cut(s) 280
MroI TCCGGA 1 cut(s) 1166
MroNI GCCGGC 2 cut(s) 1471, 1637
MroXI GAANNNNTTC 1 cut(s) 500
MscI TGGCCA 1 cut(s) 280
MseI TTAA 1 cut(s) 201
MslI CAYNNNNRTG 4 cut(s) 55, 81, 389, 1013
Msp20I TGGCCA 1 cut(s) 280
MspA1I CMGCKG 5 cut(s) 359, 543, 924, 1537, 1677
MspR9I CCNGG 8 cut(s) 107, 303, 908, 947, 1089, 1132, 1616, 1683
MvaI CCWGG 7 cut(s) 107, 303, 908, 947, 1132, 1616, 1683
MwoI GCNNNNNNNGC 4 cut(s) 896, 908, 930, 1683
NaeI GCCGGC 2 cut(s) 1473, 1639
NciI CCSGG 1 cut(s) 1089
NgoMIV GCCGGC 2 cut(s) 1471, 1637
NlaIII CATG 7 cut(s) 60, 193, 271, 319, 703, 1012, 1429
NlaIV GGNNCC 5 cut(s) 726, 799, 1459, 1636, 1687
NmeAIII GCCGAG 3 cut(s) 430, 1276, 1372
NmuCI GTSAC 2 cut(s) 305, 452
OliI CACNNNNGTG 1 cut(s) 81
PagI TCATGA 1 cut(s) 1008
PaqCI CACCTGC 1 cut(s) 1186
PceI AGGCCT 1 cut(s) 410
PciSI GCTCTTC 1 cut(s) 1365
PcsI WCGNNNNNNNCGW 2 cut(s) 651, 1701
PdiI GCCGGC 2 cut(s) 1473, 1639
PdmI GAANNNNTTC 1 cut(s) 500
PfeI GAWTC 3 cut(s) 178, 1099, 1170
Pfl23II CGTACG 1 cut(s) 129
PflMI CCANNNNNTGG 2 cut(s) 1518, 1522
PfoI TCCNGGA 1 cut(s) 945
Ple19I CGATCG 1 cut(s) 1503
PleI GAGTC 4 cut(s) 332, 629, 1100, 1490
PpsI GAGTC 4 cut(s) 332, 629, 1100, 1490
PpuMI RGGWCCY 1 cut(s) 949
Psp124BI GAGCTC 2 cut(s) 858, 1164
Psp5II RGGWCCY 1 cut(s) 949
Psp6I CCWGG 7 cut(s) 105, 301, 906, 945, 1130, 1614, 1681
PspEI GGTNACC 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 1622
PspGI CCWGG 7 cut(s) 105, 301, 906, 945, 1130, 1614, 1681
PspLI CGTACG 1 cut(s) 129
PspN4I GGNNCC 5 cut(s) 726, 799, 1459, 1636, 1687
PspPI GGNCC 9 cut(s) 20, 299, 379, 943, 949, 1458, 1640, 1679, 1685
PspPPI RGGWCCY 1 cut(s) 949
PsrI GAACNNNNNNTAC 2 cut(s) 1403, 1435
PsuI RGATCY 2 cut(s) 703, 797
PvuI CGATCG 1 cut(s) 1503
PvuII CAGCTG 1 cut(s) 1537
RsaI GTAC 5 cut(s) 131, 819, 1194, 1355, 1613
RsaNI GTAC 5 cut(s) 130, 818, 1193, 1354, 1612
RseI CAYNNNNRTG 4 cut(s) 55, 81, 389, 1013
SacI GAGCTC 2 cut(s) 858, 1164
SalI GTCGAC 1 cut(s) 1703
SapI GCTCTTC 1 cut(s) 1365
SaqAI TTAA 1 cut(s) 201
Sau96I GGNCC 9 cut(s) 20, 299, 379, 943, 949, 1458, 1640, 1679, 1685
SchI GAGTC 4 cut(s) 333, 629, 1101, 1490
ScrFI CCNGG 8 cut(s) 107, 303, 908, 947, 1089, 1132, 1616, 1683
SduI GDGCHC 5 cut(s) 559, 770, 858, 1164, 1377
SfaNI GCATC 8 cut(s) 157, 205, 238, 381, 739, 876, 1593, 1648
SinI GGWCC 4 cut(s) 20, 379, 943, 949
SmiMI CAYNNNNRTG 4 cut(s) 55, 81, 389, 1013
Sse9I AATT 3 cut(s) 33, 240, 630
SseBI AGGCCT 1 cut(s) 410
SspMI CTAG 1 cut(s) 1668
SstI GAGCTC 2 cut(s) 858, 1164
StuI AGGCCT 1 cut(s) 410
StyD4I CCNGG 8 cut(s) 105, 301, 906, 945, 1087, 1130, 1614, 1681
StyI CCWWGG 3 cut(s) 415, 1314, 1404
TaaI ACNGT 6 cut(s) 83, 208, 772, 1015, 1207, 1232
TaiI ACGT 1 cut(s) 135
TaqI TCGA 8 cut(s) 213, 654, 1215, 1491, 1499, 1503, 1695, 1704
TasI AATT 3 cut(s) 33, 240, 630
TatI WGTACW 2 cut(s) 817, 1353
TauI GCSGC 5 cut(s) 173, 359, 546, 1471, 1680
TfiI GAWTC 3 cut(s) 178, 1099, 1170
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 2 cut(s) 148, 1210
TseFI GTSAC 2 cut(s) 305, 452
TseI GCWGC 5 cut(s) 420, 823, 899, 911, 1465
Tsp45I GTSAC 2 cut(s) 305, 452
TspDTI ATGAA 4 cut(s) 206, 284, 1125, 1583
TspRI CASTG 2 cut(s) 148, 1210
Van91I CCANNNNNTGG 2 cut(s) 1518, 1522
VpaK11BI GGWCC 4 cut(s) 20, 379, 943, 949
XagI CCTNNNNNAGG 1 cut(s) 644
XapI RAATTY 1 cut(s) 240
XcmI CCANNNNNNNNNTGG 1 cut(s) 1519
XmiI GTMKAC 1 cut(s) 1704
XmnI GAANNNNTTC 1 cut(s) 500
XspI CTAG 1 cut(s) 1668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.