Rh6BG017100
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Forward (+)
2482726 .. 2484051
1326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG017100.1

Sequence Viewer

Length: 1326 bp
ATGAAGCTTTGGCCATTCAAGGTCATTGAAGGTCCTAATGACAAGCCCATTATTGTTGTGCAAGACAAGGGCCAAGAGAAACACTTCGCTGCTGAAGAAATATCATCCATGGTACTCGCAAAGATGCATAAAGTTGCTGAAGCCTATCTTGGATCAAGTGTAAAAAATGCTGTTATTACTGTCCCTGCTTACTTTAATGACGCACAACGTCAGGCTACCAAAAATGCTGCTGAAATGGCTGACCTAAATGTGATTCGTATAATAAATGAACCAACTGCTGCAGCCATTGCTTACGGCCTTGATAAGAAAGCCGGTTTAGAGAGCAAAAGAACTGTGATGATATTTGATTTAGGTGGTGGTACTTTGGATGTGTCACTGCTAGTAATAGGTCATGGCGTCTTTGATGTGATGGCCACCGCTGGAGACACTCATCTTGGAGGTGAAGATTTTGATAACAAAATGGTGAACTATTGTGCCGAGCAATTCAAGAGGAAGCACGACTTGGACGTTAGTGGGAACTTGAGAGCTCTTACGAGGTTGAAAAATGCTTGTGAGAAGGCAAAGAGGAGACTGTCATTCGCATCTTCAGTTGACATCGACATTGATTGTTTGGACCAAGGTGTAGATTTCAGTGCAACTATTACCCGTGCCAAATTTGAACAACTGAACATGGAATTCTTTAAAAAGTGCATGGAGCCTGTGAAGAAGTGTTTGAGCGATGCTGGCATGGACACAAGCAGTGTGGATGATGTTGTTCTTGCTGGCGGCTCTTCTAGAATTCCCATGGTGCAACAGCTACTACAAGACTTGTTCCATGGGAAGGAGTTGTGCAAGGGCATCAATCCGGATGAGGCGGTTGCATATGGAGCCGCCGCTCAAGCTGCAGTCTTAAGTGCTTGTGGTCACAATAATGGGAATAGGCTTCAACTTTTCACTCTCTGTGATGTCACCCCTCTGTCACTTGGGTTGGAGAGTACCGAACCCGACAGTTTCAGGAAACACATGAATTTTTTGATCCCAAGAAATTCCAGCATCCCTGTGATGAAGAAGAGCACTTTCACTACAATTTATGATAACCAAGCTTCCATAAGCTTTCCCATCTACGAGGGTGAGAGTACTACACCTGCAGAGAATAACTTTTTGGGTGAATTTTCCCTTGATGACATTCCTGCAGCTCCTGCGGGAGCTCCTAATTTTGAGGTTTGCTTCGATATTGATGCAAATGGTATCTTGAATGTCTCTGCCGAGGACATGTCTACTGGAAGAAAGAAGGGGATTACAATCAATATGGAAAAAAGAAGCTTGGGAACTGAGAAGATGATGTGA
Functional Annotation

Protein Analysis

441

Amino Acids

48.0

Weight (kDa)

5.34

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 433 2.4e-161 Hsp70 protein
MreB_Mbl PF06723 37 - 293 5.8e-17 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1132
Acc36I ACCTGC 1 cut(s) 1132
AccBSI CCGCTC 1 cut(s) 875
AccI GTMKAC 1 cut(s) 1256
AccIII TCCGGA 1 cut(s) 844
AciI CCGC 6 cut(s) 417, 765, 854, 870, 873, 1181
AclWI GGATC 2 cut(s) 160, 1009
AcoI YGGCCR 2 cut(s) 11, 411
AcsI RAATTY 6 cut(s) 653, 674, 777, 1006, 1024, 1148
AcuI CTGAAG 3 cut(s) 114, 159, 570
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 4 cut(s) 114, 361, 976, 1117
AfiI CCNNNNNNNGG 1 cut(s) 820
AflII CTTAAG 1 cut(s) 889
AflIII ACRYGT 1 cut(s) 1251
AgsI TTSAA 7 cut(s) 19, 29, 487, 541, 659, 926, 1234
AjuI GAANNNNNNNTTGG 6 cut(s) 132, 164, 485, 517, 1124, 1156
AluBI AGCT 9 cut(s) 7, 527, 796, 881, 1082, 1092, 1175, 1187, 1302
AluI AGCT 9 cut(s) 7, 527, 796, 881, 1082, 1092, 1175, 1187, 1302
Alw21I GWGCWC 3 cut(s) 529, 1055, 1189
Alw26I GTCTC 3 cut(s) 417, 562, 1243
AlwI GGATC 2 cut(s) 160, 1009
AlwNI CAGNNNCTG 1 cut(s) 1178
Aor13HI TCCGGA 1 cut(s) 844
AoxI GGCC 4 cut(s) 11, 70, 295, 411
ApeKI GCWGC 6 cut(s) 89, 227, 278, 281, 881, 1172
ApoI RAATTY 6 cut(s) 653, 674, 777, 1006, 1024, 1148
Asp700I GAANNNNTTC 1 cut(s) 83
AspS9I GGNCC 3 cut(s) 32, 70, 613
AsuHPI GGTGA 5 cut(s) 452, 475, 940, 1121, 1157
AvaII GGWCC 2 cut(s) 32, 613
BalI TGGCCA 2 cut(s) 13, 413
BanII GRGCYC 2 cut(s) 529, 1189
Bbv12I GWGCWC 3 cut(s) 529, 1055, 1189
BbvI GCAGC 6 cut(s) 76, 214, 265, 293, 868, 1184
BccI CCATC 2 cut(s) 403, 1106
BceAI ACGGC 1 cut(s) 310
BcgI CGANNNNNNTGC 2 cut(s) 1199, 1233
BcoDI GTCTC 3 cut(s) 417, 562, 1243
BfaI CTAG 2 cut(s) 380, 774
BfmI CTRYAG 4 cut(s) 279, 882, 1125, 1170
BfrI CTTAAG 1 cut(s) 889
BfuAI ACCTGC 1 cut(s) 1132
BisI GCNGC 9 cut(s) 90, 228, 279, 282, 766, 870, 873, 882, 1173
BlsI GCNGC 9 cut(s) 91, 229, 280, 283, 767, 871, 874, 883, 1174
BmcAI AGTACT 1 cut(s) 1117
Bme18I GGWCC 2 cut(s) 32, 613
BmgT120I GGNCC 3 cut(s) 32, 70, 613
BmiI GGNNCC 2 cut(s) 696, 868
BmsI GCATC 6 cut(s) 114, 590, 709, 846, 1041, 1207
BpmI CTGGAG 1 cut(s) 441
BpuEI CTTGAG 2 cut(s) 541, 861
BsaBI GATNNNNATC 1 cut(s) 1280
BsaHI GRCGYC 1 cut(s) 396
BsaJI CCNNGG 5 cut(s) 108, 616, 783, 814, 1245
BsaWI WCCGGW 1 cut(s) 844
Bsc4I CCNNNNNNNGG 1 cut(s) 820
Bse118I RCCGGY 1 cut(s) 311
Bse1I ACTGG 1 cut(s) 1264
Bse3DI GCAATG 1 cut(s) 285
Bse8I GATNNNNATC 1 cut(s) 1280
BseAI TCCGGA 1 cut(s) 844
BseDI CCNNGG 5 cut(s) 108, 616, 783, 814, 1245
BseGI GGATG 5 cut(s) 104, 373, 751, 853, 1032
BseJI GATNNNNATC 1 cut(s) 1280
BseLI CCNNNNNNNGG 1 cut(s) 820
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 1 cut(s) 1302
BseNI ACTGG 1 cut(s) 1264
BseRI GAGGAG 1 cut(s) 580
BseXI GCAGC 6 cut(s) 76, 214, 265, 293, 868, 1184
BshFI GGCC 4 cut(s) 13, 72, 297, 413
BsiHKAI GWGCWC 3 cut(s) 529, 1055, 1189
BsiSI CCGG 2 cut(s) 312, 845
BslFI GGGAC 1 cut(s) 167
BslI CCNNNNNNNGG 1 cut(s) 820
BsmAI GTCTC 3 cut(s) 417, 562, 1243
BsmFI GGGAC 1 cut(s) 167
BsnI GGCC 4 cut(s) 13, 72, 297, 413
Bsp1286I GDGCHC 3 cut(s) 529, 1055, 1189
Bsp13I TCCGGA 1 cut(s) 844
Bsp143I GATC 2 cut(s) 152, 1014
Bsp19I CCATGG 3 cut(s) 108, 783, 814
BspACI CCGC 6 cut(s) 417, 765, 854, 870, 873, 1181
BspANI GGCC 4 cut(s) 13, 72, 297, 413
BspCNI CTCAG 1 cut(s) 1303
BspEI TCCGGA 1 cut(s) 844
BspLI GGNNCC 2 cut(s) 696, 868
BspMAI CTGCAG 4 cut(s) 283, 886, 1129, 1174
BspMI ACCTGC 1 cut(s) 1132
BspPI GGATC 2 cut(s) 160, 1009
BspQI GCTCTTC 2 cut(s) 775, 1043
BspTI CTTAAG 1 cut(s) 889
BsrBI CCGCTC 1 cut(s) 875
BsrDI GCAATG 1 cut(s) 285
BsrFI RCCGGY 1 cut(s) 311
BsrI ACTGG 1 cut(s) 1264
BssAI RCCGGY 1 cut(s) 311
BssECI CCNNGG 5 cut(s) 108, 616, 783, 814, 1245
BssMI GATC 2 cut(s) 152, 1014
BssNI GRCGYC 1 cut(s) 396
BssT1I CCWWGG 4 cut(s) 108, 616, 783, 814
Bst4CI ACNGT 4 cut(s) 181, 334, 573, 989
Bst6I CTCTTC 2 cut(s) 775, 1043
BstACI GRCGYC 1 cut(s) 396
BstAFI CTTAAG 1 cut(s) 889
BstAPI GCANNNNNTGC 2 cut(s) 287, 1178
BstC8I GCNNGC 2 cut(s) 724, 763
BstDEI CTNAG 1 cut(s) 1311
BstDSI CCRYGG 3 cut(s) 108, 783, 814
BstF5I GGATG 5 cut(s) 104, 373, 751, 853, 1032
BstKTI GATC 2 cut(s) 155, 1017
BstMAI GTCTC 3 cut(s) 417, 562, 1243
BstMBI GATC 2 cut(s) 152, 1014
BstMWI GCNNNNNNNGC 7 cut(s) 236, 287, 723, 866, 878, 881, 1178
BstNSI RCATGY 1 cut(s) 1255
BstSFI CTRYAG 4 cut(s) 279, 882, 1125, 1170
BstV1I GCAGC 6 cut(s) 76, 214, 265, 293, 868, 1184
BsuRI GGCC 4 cut(s) 13, 72, 297, 413
BtgI CCRYGG 3 cut(s) 108, 783, 814
BtgZI GCGATG 1 cut(s) 732
BtsCI GGATG 5 cut(s) 104, 373, 751, 853, 1032
BtsI GCAGTG 2 cut(s) 374, 745
BtsIMutI CAGTG 3 cut(s) 374, 637, 745
BveI ACCTGC 1 cut(s) 1132
Cac8I GCNNGC 2 cut(s) 724, 763
CaiI CAGNNNCTG 1 cut(s) 1178
Cfr10I RCCGGY 1 cut(s) 311
Cfr13I GGNCC 3 cut(s) 32, 70, 613
CseI GACGC 2 cut(s) 209, 385
Csp6I GTAC 4 cut(s) 113, 360, 975, 1116
CspCI CAANNNNNGTGG 2 cut(s) 723, 758
CviAII CATG 9 cut(s) 109, 392, 670, 691, 727, 784, 815, 1003, 1252
CviQI GTAC 4 cut(s) 113, 360, 975, 1116
DdeI CTNAG 1 cut(s) 1311
DpnI GATC 2 cut(s) 154, 1016
DpnII GATC 2 cut(s) 152, 1014
DraI TTTAAA 1 cut(s) 682
EaeI YGGCCR 2 cut(s) 11, 411
Eam1104I CTCTTC 2 cut(s) 775, 1043
EarI CTCTTC 2 cut(s) 775, 1043
Ecl136II GAGCTC 2 cut(s) 527, 1187
Eco130I CCWWGG 4 cut(s) 108, 616, 783, 814
Eco24I GRGCYC 2 cut(s) 529, 1189
Eco47I GGWCC 2 cut(s) 32, 613
Eco53kI GAGCTC 2 cut(s) 527, 1187
Eco57I CTGAAG 3 cut(s) 114, 159, 570
EcoICRI GAGCTC 2 cut(s) 527, 1187
EcoO109I RGGNCCY 1 cut(s) 32
EcoRI GAATTC 2 cut(s) 674, 777
EcoT14I CCWWGG 4 cut(s) 108, 616, 783, 814
EcoT22I ATGCAT 1 cut(s) 129
EcoT38I GRGCYC 2 cut(s) 529, 1189
ErhI CCWWGG 4 cut(s) 108, 616, 783, 814
FaeI CATG 9 cut(s) 112, 395, 673, 694, 730, 787, 818, 1006, 1255
FalI AAGNNNNNCTT 4 cut(s) 132, 164, 485, 517
FaqI GGGAC 1 cut(s) 167
FatI CATG 9 cut(s) 108, 391, 669, 690, 726, 783, 814, 1002, 1251
FauI CCCGC 1 cut(s) 1174
FauNDI CATATG 1 cut(s) 862
FblI GTMKAC 1 cut(s) 1256
Fnu4HI GCNGC 9 cut(s) 90, 228, 279, 282, 766, 870, 873, 882, 1173
FokI GGATG 5 cut(s) 91, 380, 758, 860, 1019
FriOI GRGCYC 2 cut(s) 529, 1189
Fsp4HI GCNGC 9 cut(s) 90, 228, 279, 282, 766, 870, 873, 882, 1173
FspBI CTAG 2 cut(s) 380, 774
GluI GCNGC 9 cut(s) 90, 228, 279, 282, 766, 870, 873, 882, 1173
GsuI CTGGAG 1 cut(s) 441
HaeIII GGCC 4 cut(s) 13, 72, 297, 413
HapII CCGG 2 cut(s) 312, 845
HgaI GACGC 2 cut(s) 209, 385
Hin1I GRCGYC 1 cut(s) 396
Hin1II CATG 9 cut(s) 112, 395, 673, 694, 730, 787, 818, 1006, 1255
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HindIII AAGCTT 4 cut(s) 5, 1080, 1090, 1300
HinfI GANTC 1 cut(s) 253
HpaII CCGG 2 cut(s) 312, 845
HphI GGTGA 5 cut(s) 452, 475, 940, 1121, 1157
Hpy166II GTNNAC 3 cut(s) 466, 592, 1257
Hpy188III TCNNGA 5 cut(s) 487, 774, 845, 994, 1231
Hpy8I GTNNAC 3 cut(s) 466, 592, 1257
HpyAV CCTTC 4 cut(s) 23, 550, 814, 1264
HpyCH4III ACNGT 4 cut(s) 181, 334, 573, 989
HpyCH4IV ACGT 2 cut(s) 208, 507
HpyF10VI GCNNNNNNNGC 7 cut(s) 236, 287, 723, 866, 878, 881, 1178
HpyF3I CTNAG 1 cut(s) 1311
HpySE526I ACGT 2 cut(s) 208, 507
Hsp92I GRCGYC 1 cut(s) 396
Hsp92II CATG 9 cut(s) 112, 395, 673, 694, 730, 787, 818, 1006, 1255
Kpn2I TCCGGA 1 cut(s) 844
Kzo9I GATC 2 cut(s) 152, 1014
LguI GCTCTTC 2 cut(s) 775, 1043
LmnI GCTCC 5 cut(s) 694, 866, 1180, 1184, 1192
Lsp1109I GCAGC 6 cut(s) 76, 214, 265, 293, 868, 1184
LweI GCATC 6 cut(s) 114, 590, 709, 846, 1041, 1207
MaeI CTAG 2 cut(s) 380, 774
MaeII ACGT 2 cut(s) 208, 507
MaeIII GTNAC 4 cut(s) 372, 902, 946, 957
MalI GATC 2 cut(s) 154, 1016
MbiI CCGCTC 1 cut(s) 875
MboI GATC 2 cut(s) 152, 1014
MboII GAAGA 8 cut(s) 107, 455, 576, 715, 762, 1057, 1060, 1275
MhlI GDGCHC 3 cut(s) 529, 1055, 1189
MlsI TGGCCA 2 cut(s) 13, 413
MluCI AATT 9 cut(s) 482, 653, 674, 777, 1006, 1024, 1065, 1148, 1192
MluNI TGGCCA 2 cut(s) 13, 413
MmeI TCCRAC 1 cut(s) 948
MnlI CCTC 9 cut(s) 431, 483, 528, 558, 844, 963, 1099, 1192, 1240
Mox20I TGGCCA 2 cut(s) 13, 413
Mph1103I ATGCAT 1 cut(s) 129
MroI TCCGGA 1 cut(s) 844
MroXI GAANNNNTTC 1 cut(s) 83
MscI TGGCCA 2 cut(s) 13, 413
MseI TTAA 3 cut(s) 195, 681, 890
MslI CAYNNNNRTG 2 cut(s) 909, 1037
Msp20I TGGCCA 2 cut(s) 13, 413
MspA1I CMGCKG 1 cut(s) 419
MspCI CTTAAG 1 cut(s) 889
MspI CCGG 2 cut(s) 312, 845
MwoI GCNNNNNNNGC 7 cut(s) 236, 287, 723, 866, 878, 881, 1178
NcoI CCATGG 3 cut(s) 108, 783, 814
NdeI CATATG 1 cut(s) 862
NdeII GATC 2 cut(s) 152, 1014
NlaIII CATG 9 cut(s) 112, 395, 673, 694, 730, 787, 818, 1006, 1255
NlaIV GGNNCC 2 cut(s) 696, 868
NmeAIII GCCGAG 2 cut(s) 502, 1270
NmuCI GTSAC 4 cut(s) 372, 902, 946, 957
NsiI ATGCAT 1 cut(s) 129
NspI RCATGY 1 cut(s) 1255
PaqCI CACCTGC 1 cut(s) 1132
PciI ACATGT 1 cut(s) 1251
PciSI GCTCTTC 2 cut(s) 775, 1043
PcsI WCGNNNNNNNCGW 1 cut(s) 504
PdmI GAANNNNTTC 1 cut(s) 83
PfeI GAWTC 1 cut(s) 253
PkrI GCNGC 9 cut(s) 91, 229, 280, 283, 767, 871, 874, 883, 1174
PpuMI RGGWCCY 1 cut(s) 32
PscI ACATGT 1 cut(s) 1251
Psp124BI GAGCTC 2 cut(s) 529, 1189
Psp5II RGGWCCY 1 cut(s) 32
PspN4I GGNNCC 2 cut(s) 696, 868
PspPI GGNCC 3 cut(s) 32, 70, 613
PspPPI RGGWCCY 1 cut(s) 32
PstI CTGCAG 4 cut(s) 283, 886, 1129, 1174
PstNI CAGNNNCTG 1 cut(s) 1178
RsaI GTAC 4 cut(s) 114, 361, 976, 1117
RsaNI GTAC 4 cut(s) 113, 360, 975, 1116
RseI CAYNNNNRTG 2 cut(s) 909, 1037
SacI GAGCTC 2 cut(s) 529, 1189
SapI GCTCTTC 2 cut(s) 775, 1043
SaqAI TTAA 3 cut(s) 195, 681, 890
SatI GCNGC 9 cut(s) 90, 228, 279, 282, 766, 870, 873, 882, 1173
Sau3AI GATC 2 cut(s) 152, 1014
Sau96I GGNCC 3 cut(s) 32, 70, 613
ScaI AGTACT 1 cut(s) 1117
SduI GDGCHC 3 cut(s) 529, 1055, 1189
SfaNI GCATC 6 cut(s) 114, 590, 709, 846, 1041, 1207
SfcI CTRYAG 4 cut(s) 279, 882, 1125, 1170
SinI GGWCC 2 cut(s) 32, 613
SmiMI CAYNNNNRTG 2 cut(s) 909, 1037
SmlI CTYRAG 3 cut(s) 520, 876, 889
SmoI CTYRAG 3 cut(s) 520, 876, 889
Sse9I AATT 9 cut(s) 482, 653, 674, 777, 1006, 1024, 1065, 1148, 1192
SsiI CCGC 6 cut(s) 417, 765, 854, 870, 873, 1181
SspMI CTAG 2 cut(s) 380, 774
SstI GAGCTC 2 cut(s) 529, 1189
StyI CCWWGG 4 cut(s) 108, 616, 783, 814
TaaI ACNGT 4 cut(s) 181, 334, 573, 989
TaiI ACGT 2 cut(s) 211, 510
TaqI TCGA 2 cut(s) 597, 1209
TasI AATT 9 cut(s) 482, 653, 674, 777, 1006, 1024, 1065, 1148, 1192
TatI WGTACW 1 cut(s) 1115
TauI GCSGC 3 cut(s) 768, 872, 875
TfiI GAWTC 1 cut(s) 253
Tru1I TTAA 3 cut(s) 195, 681, 890
Tru9I TTAA 3 cut(s) 195, 681, 890
TscAI CASTG 3 cut(s) 381, 637, 745
TseFI GTSAC 4 cut(s) 372, 902, 946, 957
TseI GCWGC 6 cut(s) 89, 227, 278, 281, 881, 1172
Tsp45I GTSAC 4 cut(s) 372, 902, 946, 957
TspDTI ATGAA 4 cut(s) 17, 282, 1019, 1058
TspRI CASTG 3 cut(s) 381, 637, 745
Vha464I CTTAAG 1 cut(s) 889
VpaK11BI GGWCC 2 cut(s) 32, 613
XapI RAATTY 6 cut(s) 653, 674, 777, 1006, 1024, 1148
XbaI TCTAGA 1 cut(s) 773
XceI RCATGY 1 cut(s) 1255
XmiI GTMKAC 1 cut(s) 1256
XmnI GAANNNNTTC 1 cut(s) 83
XspI CTAG 2 cut(s) 380, 774
ZrmI AGTACT 1 cut(s) 1117
Zsp2I ATGCAT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.