RLG00000015411
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
65698345 .. 65709108
10764 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015411

Sequence Viewer

Length: 2355 bp
ATGTCAGATAATTGGTCAATCTCTGTTGATGAGGAATTGGATGTATCTCCTGCTGAGATCGATGACGCATTGGTTATTGAAGATGATGATATCTCAGACGAAGAAGATGATGACCAGGATGATGTTCTCAGAGATGACTCTCTTCCTGTTTGCACGCCAGACAAAGTACATGATGTGAAATTGGGAGACTCAGCAGAGGATACTACTTTAGCTTCAGCGACAAGTGACAGCCTGACTAACCCTGCTTCTGGATCTAGTAGCAGAGCTGCTGCAGTTAGAGGATCAGATTCTGTTGACCACAGGAGTAGTAATTCTTATGGTTCTAAAGGTGCAATGTCGTTTGCTGCTGCAGCAATGGCTGGGCTTGGGTCAGGTAGCCGCGGCATCAGGGGAGGATGTGGAGTGATATTTACACTTATCACTTACCAGAGGGCTGACAGTCAAGCTGAGAGGGCATCTGTTGGAGGGGCAAGTTCAACGGCTCCGTCAAAATCTAGCAAATCAGGTGCTTCCAATTCTAATTTCGATTCCCAATTGTGCACACATCTGAGGGACATCTTCTATCGAATGGGGTTATCTGACAAGGATGTTATTGCACTCTCTGGGGCTCATATGCTGGGAACAGCACATCCAGAGAGATCTGGTTTTGATGGTCCTTGGACTCAGGAACCCCTGAAGTTTGATAACTCATACTTCATAGAATTGCTGAAAGGGGAATCTGAGGGATTGCTGAAACTCCCATCAGATACAACTCTGTTAGATGACGCTGAGTTCCGTAAATATGTTGAGCTATATGCAAAGAATGAGGAGGCATTTTCCAAAGATTATGCTGAATCACTTAAGAAACTCTCTGAGCTTGGGTTTACTTCAAATTCCTCCAAGATTATTGCAAAGTATAGCACCATACTGGCAGAAGGTGCAGATGCAAAGCGATTGATAGGTAGAAGATTTAGTGACGCATGTGTTCAAAGTGATTTGAAGCTTTGGCCATTCAAGGTCATCGAAGGTCCAAATGACAAGCCCATTATTGTTGTGAAAGACAAGGGCCAAGAGAAACACTTCGCTGCTGAAGAAATATCATCCATGGTACTCACAAAGATGCATAAAGTTGCTGAAGCCTATCTTGGATCAACTGTAAAAAATGCTGTTATCACTGTCCCTGCTTACTTTAATGACTCACAACGTCAGGCTACCAAAAATGCTGCTAAAATGGCTGGCCTAAATGTGATTCGTATTATAAATGAACCAACTGCTGCAGCCATTGCTTACGGCCTCGACAAGAAAGCTGGTTCGGAGAGCAAAAGAACAGTTATGATATTTGATTTAGGTGGTGGTACTATAGATGTATCACTACTGGTAATAGGTGATGGCGTCTTTGATGTGATGGCCACCGCTGGAGACACTCACCTTGGAGGTGAAGACTTTGATAACAAAATGGTGAACTACTGTGCCGAGCAATTCAAGAGGAAGCACGATTTGGACGTTAGCGGGAACTCGAGAGCTCTTACGAGGTTGAAAAATGCATGTGAGAAGGCAAAGAGGAGACTGTCATTCACATCATCAGTTGACATCGACATCGATTGTTTGGATCAGGGTATTGACTTCAACGCAACAATTACTCGGGCCAAATTTGAACAATTGAACATGAATTTCTTCAAAAAGTGTATGGAGCCTGTGAAAAAGTGTTTGAGCGATGCTTGCATGAACGCTGGGAATGTGGATGATGTTGTTCTTGCTGGTGGCTCTTCTAGAATTCCGAAGGTGCAAGAGCTATTGCAGGATGTGTTCAACGGGAAGGAATTGTGTAAGGGCATCAATCCTGATGAGGCGATTGCATGTGGAGCAGCTGTTCAAGCTGCAGTCTTAAACGGGTGTGGAAATCAAAATGGGAATAGGCTTCAAAATGCAGTCTTAAATGGGTGTGGAATACCAAATGGGAATAGGCTTAAAAACTTCACTCTCTCGGATGTCACCCCTTTCTCACTTGGCACATGTGCTTGTAGGCTTGATTATGATCATATTCATCATCGTCGTTCAGAATGTATTGAGATGGCAGTTTTGATTCCAAGAAACACCAAAGTTCCCTTCAAGATGAACAAGTACTTTACTACCAAGTCTGACAACCAAGATAGAATGTTGATCAGTGTATTTGAAGGTGAGAGTAAGAAAGTCAAGTATAACAACTTAATGGATGAATTTAAGCTCTACGACATTCCTCCAGCTCCCAAAGGCGTTCCTAAGATTGATATTTGCTTTGATATTGATGCCGACGGCATCCTTAATGTCTCTGCTGAAGTCAAGTCCACTGGCAACAAGAAAGGGATTACAATAAACACCAAGACGAGAACCTCCTGA
Functional Annotation

Protein Analysis

785

Amino Acids

84.91

Weight (kDa)

5.29

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 175 - 268 3.6e-15 Peroxidase
HSP70 PF00012 307 - 782 6.8e-165 Hsp70 protein
MreB_Mbl PF06723 362 - 615 6.7e-18 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1238
AccII CGCG 1 cut(s) 381
AciI CCGC 4 cut(s) 379, 381, 1392, 1488
AclWI GGATC 4 cut(s) 259, 289, 1135, 1596
AcoI YGGCCR 2 cut(s) 986, 1386
AcsI RAATTY 5 cut(s) 871, 1628, 1648, 1752, 2195
AcuI CTGAAG 5 cut(s) 198, 695, 1089, 1134, 2313
AcyI GRCGYC 1 cut(s) 1371
AfaI GTAC 4 cut(s) 168, 1089, 1336, 2102
AfiI CCNNNNNNNGG 1 cut(s) 248
AflII CTTAAG 1 cut(s) 839
AflIII ACRYGT 1 cut(s) 1991
AjnI CCWGG 1 cut(s) 114
AjuI GAANNNNNNNTTGG 8 cut(s) 506, 538, 1107, 1139, 1460, 1492, 2069, 2101
AloI GAACNNNNNNTCC 4 cut(s) 613, 645, 1833, 1865
Alw21I GWGCWC 2 cut(s) 542, 1504
Alw26I GTCTC 4 cut(s) 180, 1392, 1537, 2290
Alw44I GTGCAC 1 cut(s) 538
AlwI GGATC 4 cut(s) 259, 289, 1135, 1596
AlwNI CAGNNNCTG 1 cut(s) 290
Ama87I CYCGRG 2 cut(s) 1495, 1620
AoxI GGCC 6 cut(s) 986, 1045, 1216, 1270, 1386, 1623
ApaLI GTGCAC 1 cut(s) 538
ApoI RAATTY 5 cut(s) 871, 1628, 1648, 1752, 2195
Asp700I GAANNNNTTC 2 cut(s) 1058, 1652
AspS9I GGNCC 4 cut(s) 653, 1007, 1045, 1623
AsuHPI GGTGA 6 cut(s) 1376, 1397, 1427, 1450, 1963, 2168
AvaI CYCGRG 2 cut(s) 1495, 1620
AvaII GGWCC 2 cut(s) 653, 1007
BaeGI GKGCMC 1 cut(s) 542
BalI TGGCCA 2 cut(s) 988, 1388
BanII GRGCYC 2 cut(s) 610, 1504
BbsI GAAGAC 1 cut(s) 1425
Bbv12I GWGCWC 2 cut(s) 542, 1504
BccI CCATC 5 cut(s) 644, 748, 1361, 1378, 2044
BceAI ACGGC 3 cut(s) 495, 1285, 2287
BciT130I CCWGG 1 cut(s) 116
BciVI GTATCC 1 cut(s) 193
BclI TGATCA 2 cut(s) 2014, 2139
BcoDI GTCTC 4 cut(s) 180, 1392, 1537, 2290
BfaI CTAG 3 cut(s) 255, 495, 1749
BfmI CTRYAG 5 cut(s) 270, 348, 1254, 1338, 1857
BfrI CTTAAG 1 cut(s) 839
BfuI GTATCC 1 cut(s) 193
BglII AGATCT 1 cut(s) 638
BmcAI AGTACT 1 cut(s) 2102
Bme1390I CCNGG 1 cut(s) 116
Bme18I GGWCC 2 cut(s) 653, 1007
BmeT110I CYCGRG 2 cut(s) 1495, 1620
BmgT120I GGNCC 4 cut(s) 653, 1007, 1045, 1623
BmiI GGNNCC 3 cut(s) 483, 669, 1671
BmrFI CCNGG 1 cut(s) 116
BmsI GCATC 8 cut(s) 393, 464, 913, 1089, 1684, 1821, 2254, 2283
BpiI GAAGAC 1 cut(s) 1425
BpmI CTGGAG 2 cut(s) 1416, 2202
Bsa29I ATCGAT 2 cut(s) 60, 1578
BsaBI GATNNNNATC 1 cut(s) 2013
BsaHI GRCGYC 1 cut(s) 1371
BsaJI CCNNGG 4 cut(s) 379, 656, 1083, 1408
BsaXI ACNNNNNCTCC 2 cut(s) 1833, 1863
Bsc4I CCNNNNNNNGG 1 cut(s) 248
Bse1I ACTGG 3 cut(s) 912, 1359, 2311
Bse3DI GCAATG 3 cut(s) 339, 360, 1260
Bse8I GATNNNNATC 1 cut(s) 2013
BseBI CCWGG 1 cut(s) 116
BseCI ATCGAT 2 cut(s) 60, 1578
BseDI CCNNGG 4 cut(s) 379, 656, 1083, 1408
BseJI GATNNNNATC 1 cut(s) 2013
BseLI CCNNNNNNNGG 1 cut(s) 248
BseMI GCAATG 3 cut(s) 339, 360, 1260
BseNI ACTGG 3 cut(s) 912, 1359, 2311
BseRI GAGGAG 2 cut(s) 821, 1555
BseSI GKGCMC 1 cut(s) 542
BseYI CCCAGC 3 cut(s) 359, 616, 1709
BsgI GTGCAG 1 cut(s) 939
Bsh1236I CGCG 1 cut(s) 381
BshFI GGCC 6 cut(s) 988, 1047, 1218, 1272, 1388, 1625
BshVI ATCGAT 2 cut(s) 60, 1578
BsiHKAI GWGCWC 2 cut(s) 542, 1504
BsiHKCI CYCGRG 2 cut(s) 1495, 1620
BslFI GGGAC 2 cut(s) 566, 1142
BslI CCNNNNNNNGG 1 cut(s) 248
BsmAI GTCTC 4 cut(s) 180, 1392, 1537, 2290
BsmFI GGGAC 2 cut(s) 566, 1142
BsnI GGCC 6 cut(s) 988, 1047, 1218, 1272, 1388, 1625
BsoBI CYCGRG 2 cut(s) 1495, 1620
Bsp1286I GDGCHC 3 cut(s) 542, 610, 1504
Bsp143I GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
Bsp19I CCATGG 1 cut(s) 1083
BspACI CCGC 4 cut(s) 379, 381, 1392, 1488
BspANI GGCC 6 cut(s) 988, 1047, 1218, 1272, 1388, 1625
BspDI ATCGAT 2 cut(s) 60, 1578
BspFNI CGCG 1 cut(s) 381
BspLI GGNNCC 3 cut(s) 483, 669, 1671
BspMAI CTGCAG 4 cut(s) 274, 352, 1258, 1861
BspPI GGATC 4 cut(s) 259, 289, 1135, 1596
BspQI GCTCTTC 1 cut(s) 1750
BspTI CTTAAG 1 cut(s) 839
BsrDI GCAATG 3 cut(s) 339, 360, 1260
BsrI ACTGG 3 cut(s) 912, 1359, 2311
BssECI CCNNGG 4 cut(s) 379, 656, 1083, 1408
BssMI GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
BssNI GRCGYC 1 cut(s) 1371
BssT1I CCWWGG 3 cut(s) 656, 1083, 1408
Bst2UI CCWGG 1 cut(s) 116
Bst4CI ACNGT 6 cut(s) 440, 1135, 1156, 1309, 1448, 1548
Bst6I CTCTTC 2 cut(s) 147, 1750
BstACI GRCGYC 1 cut(s) 1371
BstAFI CTTAAG 1 cut(s) 839
BstAPI GCANNNNNTGC 2 cut(s) 917, 1262
BstC8I GCNNGC 3 cut(s) 155, 1216, 1699
BstDSI CCRYGG 2 cut(s) 379, 1083
BstFNI CGCG 1 cut(s) 381
BstKTI GATC 8 cut(s) 60, 254, 284, 641, 1130, 1591, 2017, 2142
BstMAI GTCTC 4 cut(s) 180, 1392, 1537, 2290
BstMBI GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
BstMWI GCNNNNNNNGC 9 cut(s) 350, 356, 452, 917, 1211, 1262, 1698, 1841, 1853
BstNI CCWGG 1 cut(s) 116
BstNSI RCATGY 4 cut(s) 963, 1527, 1839, 1995
BstSCI CCNGG 1 cut(s) 114
BstSFI CTRYAG 5 cut(s) 270, 348, 1254, 1338, 1857
BstSLI GKGCMC 1 cut(s) 542
BstUI CGCG 1 cut(s) 381
BstV2I GAAGAC 1 cut(s) 1425
BstX2I RGATCY 2 cut(s) 251, 638
BstYI RGATCY 2 cut(s) 251, 638
Bsu15I ATCGAT 2 cut(s) 60, 1578
BsuI GTATCC 1 cut(s) 193
BsuRI GGCC 6 cut(s) 988, 1047, 1218, 1272, 1388, 1625
BsuTUI ATCGAT 2 cut(s) 60, 1578
BtgI CCRYGG 2 cut(s) 379, 1083
BtgZI GCGATG 1 cut(s) 1707
BtsIMutI CAGTG 3 cut(s) 1152, 2149, 2304
Cac8I GCNNGC 3 cut(s) 155, 1216, 1699
CaiI CAGNNNCTG 1 cut(s) 290
Cfr13I GGNCC 4 cut(s) 653, 1007, 1045, 1623
Cfr42I CCGCGG 1 cut(s) 382
ClaI ATCGAT 2 cut(s) 60, 1578
CseI GACGC 4 cut(s) 74, 773, 965, 1360
Csp6I GTAC 4 cut(s) 167, 1088, 1335, 2101
CviAII CATG 8 cut(s) 170, 960, 1084, 1524, 1645, 1702, 1836, 1992
CviQI GTAC 4 cut(s) 167, 1088, 1335, 2101
DpnI GATC 8 cut(s) 59, 253, 283, 640, 1129, 1590, 2016, 2141
DpnII GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
EaeI YGGCCR 2 cut(s) 986, 1386
Eam1104I CTCTTC 2 cut(s) 147, 1750
EarI CTCTTC 2 cut(s) 147, 1750
Ecl136II GAGCTC 1 cut(s) 1502
Eco130I CCWWGG 3 cut(s) 656, 1083, 1408
Eco24I GRGCYC 2 cut(s) 610, 1504
Eco32I GATATC 1 cut(s) 91
Eco47I GGWCC 2 cut(s) 653, 1007
Eco53kI GAGCTC 1 cut(s) 1502
Eco57I CTGAAG 5 cut(s) 198, 695, 1089, 1134, 2313
Eco88I CYCGRG 2 cut(s) 1495, 1620
EcoICRI GAGCTC 1 cut(s) 1502
EcoRI GAATTC 1 cut(s) 1752
EcoRII CCWGG 1 cut(s) 114
EcoRV GATATC 1 cut(s) 91
EcoT14I CCWWGG 3 cut(s) 656, 1083, 1408
EcoT22I ATGCAT 2 cut(s) 1104, 1525
EcoT38I GRGCYC 2 cut(s) 610, 1504
ErhI CCWWGG 3 cut(s) 656, 1083, 1408
FaeI CATG 8 cut(s) 173, 963, 1087, 1527, 1648, 1705, 1839, 1995
FalI AAGNNNNNCTT 2 cut(s) 1107, 1139
FaqI GGGAC 2 cut(s) 566, 1142
FatI CATG 8 cut(s) 169, 959, 1083, 1523, 1644, 1701, 1835, 1991
FauI CCCGC 1 cut(s) 1481
FauNDI CATATG 1 cut(s) 612
FbaI TGATCA 2 cut(s) 2014, 2139
FriOI GRGCYC 2 cut(s) 610, 1504
FspBI CTAG 3 cut(s) 255, 495, 1749
GsaI CCCAGC 3 cut(s) 363, 620, 1713
GsuI CTGGAG 2 cut(s) 1416, 2202
HaeIII GGCC 6 cut(s) 988, 1047, 1218, 1272, 1388, 1625
HgaI GACGC 4 cut(s) 74, 773, 965, 1360
Hin1I GRCGYC 1 cut(s) 1371
Hin1II CATG 8 cut(s) 173, 963, 1087, 1527, 1648, 1705, 1839, 1995
HincII GTYRAC 2 cut(s) 295, 1567
HindII GTYRAC 2 cut(s) 295, 1567
HindIII AAGCTT 1 cut(s) 980
HphI GGTGA 6 cut(s) 1376, 1397, 1427, 1450, 1963, 2168
Hpy166II GTNNAC 6 cut(s) 295, 540, 864, 1441, 1567, 2304
Hpy188III TCNNGA 9 cut(s) 249, 632, 665, 1462, 1497, 1749, 1820, 2089, 2352
Hpy8I GTNNAC 6 cut(s) 295, 540, 864, 1441, 1567, 2304
Hpy99I CGWCG 2 cut(s) 2034, 2273
HpyAV CCTTC 7 cut(s) 908, 998, 1525, 1753, 1789, 2095, 2147
HpyCH4III ACNGT 6 cut(s) 440, 1135, 1156, 1309, 1448, 1548
HpyCH4IV ACGT 2 cut(s) 1183, 1482
HpyF10VI GCNNNNNNNGC 9 cut(s) 350, 356, 452, 917, 1211, 1262, 1698, 1841, 1853
HpySE526I ACGT 2 cut(s) 1183, 1482
Hsp92I GRCGYC 1 cut(s) 1371
Hsp92II CATG 8 cut(s) 173, 963, 1087, 1527, 1648, 1705, 1839, 1995
Ksp22I TGATCA 2 cut(s) 2014, 2139
KspI CCGCGG 1 cut(s) 382
Kzo9I GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
LguI GCTCTTC 1 cut(s) 1750
LmnI GCTCC 4 cut(s) 487, 1669, 1841, 2227
LweI GCATC 8 cut(s) 393, 464, 913, 1089, 1684, 1821, 2254, 2283
MaeI CTAG 3 cut(s) 255, 495, 1749
MaeII ACGT 2 cut(s) 1183, 1482
MaeIII GTNAC 3 cut(s) 224, 953, 1969
MalI GATC 8 cut(s) 59, 253, 283, 640, 1129, 1590, 2016, 2141
MboI GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
MfeI CAATTG 2 cut(s) 533, 1637
MflI RGATCY 2 cut(s) 251, 638
MhlI GDGCHC 3 cut(s) 542, 610, 1504
MlsI TGGCCA 2 cut(s) 988, 1388
MluNI TGGCCA 2 cut(s) 988, 1388
MlyI GAGTC 4 cut(s) 131, 182, 655, 1169
MmeI TCCRAC 1 cut(s) 442
Mox20I TGGCCA 2 cut(s) 988, 1388
Mph1103I ATGCAT 2 cut(s) 1104, 1525
MroXI GAANNNNTTC 2 cut(s) 1058, 1652
MscI TGGCCA 2 cut(s) 988, 1388
MseI TTAA 8 cut(s) 840, 1170, 1865, 1913, 1947, 2186, 2199, 2280
MslI CAYNNNNRTG 1 cut(s) 1097
Msp20I TGGCCA 2 cut(s) 988, 1388
MspA1I CMGCKG 3 cut(s) 381, 1394, 1847
MspCI CTTAAG 1 cut(s) 839
MspR9I CCNGG 1 cut(s) 116
MunI CAATTG 2 cut(s) 533, 1637
MvaI CCWGG 1 cut(s) 116
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 9 cut(s) 350, 356, 452, 917, 1211, 1262, 1698, 1841, 1853
NcoI CCATGG 1 cut(s) 1083
NdeI CATATG 1 cut(s) 612
NdeII GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
NlaIII CATG 8 cut(s) 173, 963, 1087, 1527, 1648, 1705, 1839, 1995
NlaIV GGNNCC 3 cut(s) 483, 669, 1671
NmeAIII GCCGAG 1 cut(s) 1477
NmuCI GTSAC 3 cut(s) 224, 953, 1969
NsiI ATGCAT 2 cut(s) 1104, 1525
NspI RCATGY 4 cut(s) 963, 1527, 1839, 1995
PaeR7I CTCGAG 1 cut(s) 1495
PciI ACATGT 1 cut(s) 1991
PciSI GCTCTTC 1 cut(s) 1750
PcsI WCGNNNNNNNCGW 1 cut(s) 1479
PdmI GAANNNNTTC 2 cut(s) 1058, 1652
PfeI GAWTC 6 cut(s) 287, 527, 716, 833, 1228, 2062
PleI GAGTC 4 cut(s) 131, 182, 655, 1169
PpsI GAGTC 4 cut(s) 131, 182, 655, 1169
PscI ACATGT 1 cut(s) 1991
PsiI TTATAA 1 cut(s) 1238
Psp124BI GAGCTC 1 cut(s) 1504
Psp6I CCWGG 1 cut(s) 114
PspFI CCCAGC 3 cut(s) 359, 616, 1709
PspGI CCWGG 1 cut(s) 114
PspN4I GGNNCC 3 cut(s) 483, 669, 1671
PspPI GGNCC 4 cut(s) 653, 1007, 1045, 1623
PstI CTGCAG 4 cut(s) 274, 352, 1258, 1861
PstNI CAGNNNCTG 1 cut(s) 290
PsuI RGATCY 2 cut(s) 251, 638
PvuII CAGCTG 1 cut(s) 1847
RsaI GTAC 4 cut(s) 168, 1089, 1336, 2102
RsaNI GTAC 4 cut(s) 167, 1088, 1335, 2101
RseI CAYNNNNRTG 1 cut(s) 1097
SacI GAGCTC 1 cut(s) 1504
SacII CCGCGG 1 cut(s) 382
SapI GCTCTTC 1 cut(s) 1750
SaqAI TTAA 8 cut(s) 840, 1170, 1865, 1913, 1947, 2186, 2199, 2280
Sau3AI GATC 8 cut(s) 57, 251, 281, 638, 1127, 1588, 2014, 2139
Sau96I GGNCC 4 cut(s) 653, 1007, 1045, 1623
ScaI AGTACT 1 cut(s) 2102
SchI GAGTC 4 cut(s) 131, 182, 655, 1169
ScrFI CCNGG 1 cut(s) 116
SduI GDGCHC 3 cut(s) 542, 610, 1504
SfaNI GCATC 8 cut(s) 393, 464, 913, 1089, 1684, 1821, 2254, 2283
SfcI CTRYAG 5 cut(s) 270, 348, 1254, 1338, 1857
Sfr274I CTCGAG 1 cut(s) 1495
Sfr303I CCGCGG 1 cut(s) 382
SgrBI CCGCGG 1 cut(s) 382
SinI GGWCC 2 cut(s) 653, 1007
SlaI CTCGAG 1 cut(s) 1495
SmiMI CAYNNNNRTG 1 cut(s) 1097
SmlI CTYRAG 2 cut(s) 839, 1495
SmoI CTYRAG 2 cut(s) 839, 1495
SsiI CCGC 4 cut(s) 379, 381, 1392, 1488
SspMI CTAG 3 cut(s) 255, 495, 1749
SstI GAGCTC 1 cut(s) 1504
StyD4I CCNGG 1 cut(s) 114
StyI CCWWGG 3 cut(s) 656, 1083, 1408
TaaI ACNGT 6 cut(s) 440, 1135, 1156, 1309, 1448, 1548
TaiI ACGT 2 cut(s) 1186, 1485
TaqI TCGA 8 cut(s) 60, 525, 565, 1002, 1275, 1496, 1572, 1578
TatI WGTACW 2 cut(s) 166, 2100
TauI GCSGC 2 cut(s) 381, 384
TfiI GAWTC 6 cut(s) 287, 527, 716, 833, 1228, 2062
Tru1I TTAA 8 cut(s) 840, 1170, 1865, 1913, 1947, 2186, 2199, 2280
Tru9I TTAA 8 cut(s) 840, 1170, 1865, 1913, 1947, 2186, 2199, 2280
TscAI CASTG 3 cut(s) 1159, 2149, 2311
TseFI GTSAC 3 cut(s) 224, 953, 1969
Tsp45I GTSAC 3 cut(s) 224, 953, 1969
TspDTI ATGAA 7 cut(s) 685, 1257, 1661, 1718, 2012, 2108, 2208
TspGWI ACGGA 2 cut(s) 474, 764
TspRI CASTG 3 cut(s) 1159, 2149, 2311
Vha464I CTTAAG 1 cut(s) 839
VneI GTGCAC 1 cut(s) 538
VpaK11BI GGWCC 2 cut(s) 653, 1007
XapI RAATTY 5 cut(s) 871, 1628, 1648, 1752, 2195
XbaI TCTAGA 1 cut(s) 1748
XceI RCATGY 4 cut(s) 963, 1527, 1839, 1995
XhoI CTCGAG 1 cut(s) 1495
XmnI GAANNNNTTC 2 cut(s) 1058, 1652
XspI CTAG 3 cut(s) 255, 495, 1749
ZrmI AGTACT 1 cut(s) 2102
Zsp2I ATGCAT 2 cut(s) 1104, 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.