Rorug01G0331100
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
44967077 .. 44969190
2114 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0331100.1

Sequence Viewer

Length: 1833 bp
ATGATATTGCATCTACTTCTGCAAAACAACCGAGAAGAAATGGGAGCTGCTAGTATAGAAAATTGGGTGGACATGAAGAGCCTTGTCCTGCAAGTCCTGAAAGGACGATGGCTCATGGTATTTGCTTCATTTCTGATGATGGTCTCAGCCGGTGCCAGCTACATGTTCGGCCTCTACTCCAACGACATCAAGTCCGTCCTCGGCTACGACCAGAGCACGCTCAACCTCATCAGCTTCTCTAAGGACTTAGGTGGCAACATCGGCGTCCTCTCCGGCCTCATCAACGAGGTCACACCCCCCTGGGTGGTCATATCCATCGGTGCAGTCCTCAACTTCTTCGGACACTTCATGATTTGGCTAGCAATAGCTAGAAAAATCCCTAAACCCCAAGTTTGGCACATGTGCATGTACATGGGTATAGGGGCTAATTCGCACACTTTTACCAACACCGGAGCTCTGGTCACCTGCGTGAAGAACTTCCCGGAGAGCCGTGGCATCGTGCTAGGGCTTTTGAAGAGCTATACTGGTATAAGTGCAGCTGTGGTGGCACAGCTGTACCATGCTGTCTATGGTGACGATACCAAGTATTTCACTTTAGTTGTGGCTTGGCTTCCGACGGCTATTTCTTTCGCTTTCATTGGAACTATTCGGATCATGAAGGTTAGTCGAAGTGGCTCAAACGAACTCAAGGCTTTTTATCATTTCCTTTATTTTTCACTTGGTCTAGCTGCATTTTTGTTGGTTATAATTATAGTGGAAAAAAACGTCAGCTTTAATCCAAGTGAGTATGTTGGAAGTGCAGCTATAGTCCTCTTTTTACTCTTTTTACCTCTTACAGTGGTAATTATGGAAGAGTATAAGGTTTGGAAGAGCAAGAGATCAATAGTAACCAAAGCCTCGACACATTCTAGCCGTGCCGAACCTGAGACTTTGGGGCACCAAGATGAACCGTTAGACCATTTTGTTGTTGTTGAAAAAGAAGTTTCTTGGCGGAAAGACGTATTTAACCCGCCGGATATCGGGGAGGACTTCACCATACTCCAAGCCGTTTTCAGCGTCGAGATGGTGACTTTACTCTTTGCAACAATTTGTGGCCTTGGAGGCACCATGACCATGATGGACAACTTGGGGCAAATTGGTACATCTTTTGGGTACCCTCTGAAAAGCATAAGAAACTTTGTGTCCCTAACAAGCATATGGAACTATTCGGGCCACATTGCTGCTGGTATAGGCTCAGAAATATTTATCACAAAGTACAAATGGCCTCGCCCTCTAATTTTCACAGCAATTCTTTTGCTCTCATGTGTTGGTCATCTTCTAATAGCATTCAACGTCCCATATGGTCTCTATGTTGCTTCAGTGGTTACTGGGTTTTGTTTTGGTGCTCATTGGCCTTTGATCTACACCATTATCTCCGAGCTTTTCGGCCTCAAGTACTACTCGACGTTGTACAATATTGGTGGATTGGCTAGCCCTATTGGGTTGTATCTGCTCAATGTGAGGGTTACTGGGTATTTATATGATGTGGAGGCTAAGAAGCAAATGGCAGCTTTGGGGCTTCAGAGGAAGGTTGGGGAAGAGTTGAACTGTGTTGGGGGGGAGTGTTTCAAATTGTCTTTCATCATCATTACTGTGGTAACTTTCTTTGGTGCGCTTGTTTCTTTGGTTTTGGTGATGAGGACAAGGAAGTTTTATAGGGGTGATATTTATAAGAAGTTCAGAGAAACGGTTGGTGTGGCTGATGAAACAAAAATAGAGGTTGCTAAAACTTCAGCTGAGGTTGAAACCACTGATCTTAAAAGGGACCTTTCCCAACCCAAAGGCCAATGGTAA
Functional Annotation

Protein Analysis

610

Amino Acids

67.78

Weight (kDa)

8.69

Isoelectric Point (pI)

26.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Nodulin-like PF06813 36 - 282 6.2e-85 Nodulin-like
NFD4_C PF23262 367 - 565 8.6e-15 NFD4, C-terminal domain
MFS_1 PF07690 378 - 563 9.7e-07 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 746, 1710
AarI CACCTGC 1 cut(s) 473
Acc36I ACCTGC 1 cut(s) 473
Acc65I GGTACC 1 cut(s) 1152
AccB1I GGYRCC 4 cut(s) 152, 936, 1103, 1152
AciI CCGC 2 cut(s) 991, 1010
AclWI GGATC 1 cut(s) 659
AcuI CTGAAG 3 cut(s) 1341, 1544, 1755
AcyI GRCGYC 1 cut(s) 264
AfaI GTAC 7 cut(s) 410, 557, 1141, 1154, 1256, 1436, 1451
AfiI CCNNNNNNNGG 3 cut(s) 304, 393, 1019
AflIII ACRYGT 2 cut(s) 162, 399
AgsI TTSAA 6 cut(s) 514, 974, 1330, 1585, 1609, 1784
AhdI GACNNNNNGTC 1 cut(s) 190
AjnI CCWGG 1 cut(s) 299
AleI CACNNNNGTG 1 cut(s) 467
Alw21I GWGCWC 3 cut(s) 218, 457, 1387
Alw26I GTCTC 3 cut(s) 148, 920, 1349
AlwI GGATC 1 cut(s) 659
AoxI GGCC 8 cut(s) 169, 274, 1093, 1210, 1262, 1391, 1426, 1822
ApeKI GCWGC 6 cut(s) 47, 536, 728, 800, 1220, 1547
Asp700I GAANNNNTTC 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 1152
AspLEI GCGC 1 cut(s) 1654
AspS9I GGNCC 2 cut(s) 1210, 1804
AsuC2I CCSGG 1 cut(s) 482
AsuHPI GGTGA 6 cut(s) 454, 584, 1024, 1078, 1684, 1712
AsuNHI GCTAGC 2 cut(s) 358, 1469
AvaII GGWCC 1 cut(s) 1804
BaeGI GKGCMC 1 cut(s) 939
BaeI ACNNNNGTAYC 2 cut(s) 539, 572
BanI GGYRCC 4 cut(s) 152, 936, 1103, 1152
BanII GRGCYC 1 cut(s) 457
Bbv12I GWGCWC 3 cut(s) 218, 457, 1387
BbvCI CCTCAGC 1 cut(s) 1776
BbvI GCAGC 6 cut(s) 34, 548, 715, 812, 1207, 1559
BccI CCATC 5 cut(s) 102, 133, 323, 1057, 1111
BceAI ACGGC 4 cut(s) 474, 633, 897, 1031
BciT130I CCWGG 1 cut(s) 301
BcnI CCSGG 1 cut(s) 482
BcoDI GTCTC 3 cut(s) 148, 920, 1349
BfaI CTAG 7 cut(s) 51, 359, 369, 503, 725, 909, 1470
BfmI CTRYAG 1 cut(s) 804
BfuAI ACCTGC 1 cut(s) 473
BglI GCCNNNNNGGC 1 cut(s) 1101
BisI GCNGC 6 cut(s) 48, 537, 729, 801, 1221, 1548
BlsI GCNGC 6 cut(s) 49, 538, 730, 802, 1222, 1549
BmcAI AGTACT 1 cut(s) 1436
Bme1390I CCNGG 2 cut(s) 301, 482
Bme18I GGWCC 1 cut(s) 1804
BmeRI GACNNNNNGTC 1 cut(s) 190
BmgT120I GGNCC 2 cut(s) 1210, 1804
BmiI GGNNCC 5 cut(s) 154, 938, 1105, 1154, 1805
BmrFI CCNGG 2 cut(s) 301, 482
BmrI ACTGGG 2 cut(s) 1377, 1518
BmsI GCATC 2 cut(s) 19, 504
BmtI GCTAGC 2 cut(s) 362, 1473
BmuI ACTGGG 2 cut(s) 1377, 1518
Bpu10I CCTNAGC 1 cut(s) 1776
BpuEI CTTGAG 2 cut(s) 671, 1415
BpuMI CCSGG 1 cut(s) 482
BsaHI GRCGYC 1 cut(s) 264
BsaI GGTCTC 2 cut(s) 148, 1349
BsaJI CCNNGG 5 cut(s) 199, 299, 300, 490, 1096
BsaWI WCCGGW 1 cut(s) 449
BsaXI ACNNNNNCTCC 2 cut(s) 444, 474
Bsc4I CCNNNNNNNGG 3 cut(s) 304, 393, 1019
Bse118I RCCGGY 1 cut(s) 149
Bse1I ACTGG 3 cut(s) 529, 1372, 1513
Bse3DI GCAATG 1 cut(s) 1215
BseBI CCWGG 1 cut(s) 301
BseDI CCNNGG 5 cut(s) 199, 299, 300, 490, 1096
BseLI CCNNNNNNNGG 3 cut(s) 304, 393, 1019
BseMI GCAATG 1 cut(s) 1215
BseMII CTCAG 4 cut(s) 159, 915, 1248, 1767
BseNI ACTGG 3 cut(s) 529, 1372, 1513
BseSI GKGCMC 1 cut(s) 939
BseXI GCAGC 6 cut(s) 34, 548, 715, 812, 1207, 1559
BsgI GTGCAG 3 cut(s) 342, 555, 819
BshFI GGCC 8 cut(s) 171, 276, 1095, 1212, 1264, 1393, 1428, 1824
BshNI GGYRCC 4 cut(s) 152, 936, 1103, 1152
BsiHKAI GWGCWC 3 cut(s) 218, 457, 1387
BsiSI CCGG 5 cut(s) 150, 273, 450, 482, 1013
BslFI GGGAC 3 cut(s) 1168, 1319, 1817
BslI CCNNNNNNNGG 3 cut(s) 304, 393, 1019
BsmAI GTCTC 3 cut(s) 148, 920, 1349
BsmFI GGGAC 3 cut(s) 1168, 1319, 1817
BsmI GAATGC 1 cut(s) 1325
BsnI GGCC 8 cut(s) 171, 276, 1095, 1212, 1264, 1393, 1428, 1824
Bso31I GGTCTC 2 cut(s) 148, 1349
Bsp1286I GDGCHC 4 cut(s) 218, 457, 939, 1387
Bsp1407I TGTACA 2 cut(s) 408, 1449
Bsp143I GATC 4 cut(s) 651, 878, 1398, 1792
BspACI CCGC 2 cut(s) 991, 1010
BspANI GGCC 8 cut(s) 171, 276, 1095, 1212, 1264, 1393, 1428, 1824
BspCNI CTCAG 4 cut(s) 158, 916, 1247, 1768
BspHI TCATGA 2 cut(s) 348, 654
BspLI GGNNCC 5 cut(s) 154, 938, 1105, 1154, 1805
BspMI ACCTGC 1 cut(s) 473
BspOI GCTAGC 2 cut(s) 362, 1473
BspPI GGATC 1 cut(s) 659
BspQI GCTCTTC 3 cut(s) 71, 509, 863
BspT107I GGYRCC 4 cut(s) 152, 936, 1103, 1152
BspTNI GGTCTC 2 cut(s) 148, 1349
BsrDI GCAATG 1 cut(s) 1215
BsrFI RCCGGY 1 cut(s) 149
BsrGI TGTACA 2 cut(s) 408, 1449
BsrI ACTGG 3 cut(s) 529, 1372, 1513
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 5 cut(s) 199, 299, 300, 490, 1096
BssMI GATC 4 cut(s) 651, 878, 1398, 1792
BssNI GRCGYC 1 cut(s) 264
BssT1I CCWWGG 1 cut(s) 1096
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 5 cut(s) 838, 951, 1589, 1633, 1729
Bst6I CTCTTC 5 cut(s) 71, 509, 846, 863, 1572
BstACI GRCGYC 1 cut(s) 264
BstAUI TGTACA 2 cut(s) 408, 1449
BstC8I GCNNGC 4 cut(s) 157, 218, 360, 1471
BstDEI CTNAG 7 cut(s) 145, 240, 247, 924, 1234, 1533, 1776
BstDSI CCRYGG 1 cut(s) 490
BstEII GGTNACC 1 cut(s) 460
BstHHI GCGC 1 cut(s) 1654
BstKTI GATC 4 cut(s) 654, 881, 1401, 1795
BstMAI GTCTC 3 cut(s) 148, 920, 1349
BstMBI GATC 4 cut(s) 651, 878, 1398, 1792
BstMWI GCNNNNNNNGC 3 cut(s) 261, 545, 1101
BstNI CCWGG 1 cut(s) 301
BstNSI RCATGY 3 cut(s) 166, 403, 409
BstPI GGTNACC 1 cut(s) 460
BstSCI CCNGG 2 cut(s) 299, 480
BstSFI CTRYAG 1 cut(s) 804
BstSLI GKGCMC 1 cut(s) 939
BstV1I GCAGC 6 cut(s) 34, 548, 715, 812, 1207, 1559
BsuRI GGCC 8 cut(s) 171, 276, 1095, 1212, 1264, 1393, 1428, 1824
BtgI CCRYGG 1 cut(s) 490
BtsIMutI CAGTG 3 cut(s) 843, 1365, 1788
BveI ACCTGC 1 cut(s) 473
Cac8I GCNNGC 4 cut(s) 157, 218, 360, 1471
CciI TCATGA 2 cut(s) 348, 654
CfoI GCGC 1 cut(s) 1654
Cfr10I RCCGGY 1 cut(s) 149
Cfr13I GGNCC 2 cut(s) 1210, 1804
CseI GACGC 2 cut(s) 253, 1045
Csp6I GTAC 7 cut(s) 409, 556, 1140, 1153, 1255, 1435, 1450
CspCI CAANNNNNGTGG 2 cut(s) 1441, 1476
CviQI GTAC 7 cut(s) 409, 556, 1140, 1153, 1255, 1435, 1450
DdeI CTNAG 7 cut(s) 145, 240, 247, 924, 1234, 1533, 1776
DpnI GATC 4 cut(s) 653, 880, 1400, 1794
DpnII GATC 4 cut(s) 651, 878, 1398, 1792
DriI GACNNNNNGTC 1 cut(s) 190
Eam1104I CTCTTC 5 cut(s) 71, 509, 846, 863, 1572
Eam1105I GACNNNNNGTC 1 cut(s) 190
EarI CTCTTC 5 cut(s) 71, 509, 846, 863, 1572
EciI GGCGGA 1 cut(s) 1006
Ecl136II GAGCTC 1 cut(s) 455
Eco130I CCWWGG 1 cut(s) 1096
Eco24I GRGCYC 1 cut(s) 457
Eco31I GGTCTC 2 cut(s) 148, 1349
Eco32I GATATC 1 cut(s) 1018
Eco47I GGWCC 1 cut(s) 1804
Eco53kI GAGCTC 1 cut(s) 455
Eco57I CTGAAG 3 cut(s) 1341, 1544, 1755
Eco91I GGTNACC 1 cut(s) 460
EcoICRI GAGCTC 1 cut(s) 455
EcoO109I RGGNCCY 1 cut(s) 1804
EcoO65I GGTNACC 1 cut(s) 460
EcoRII CCWGG 1 cut(s) 299
EcoRV GATATC 1 cut(s) 1018
EcoT14I CCWWGG 1 cut(s) 1096
EcoT38I GRGCYC 1 cut(s) 457
ErhI CCWWGG 1 cut(s) 1096
FaqI GGGAC 3 cut(s) 1168, 1319, 1817
FauI CCCGC 1 cut(s) 1017
FauNDI CATATG 2 cut(s) 1196, 1339
Fnu4HI GCNGC 6 cut(s) 48, 537, 729, 801, 1221, 1548
FriOI GRGCYC 1 cut(s) 457
Fsp4HI GCNGC 6 cut(s) 48, 537, 729, 801, 1221, 1548
FspBI CTAG 7 cut(s) 51, 359, 369, 503, 725, 909, 1470
GlaI GCGC 1 cut(s) 1653
GluI GCNGC 6 cut(s) 48, 537, 729, 801, 1221, 1548
HaeIII GGCC 8 cut(s) 171, 276, 1095, 1212, 1264, 1393, 1428, 1824
HapII CCGG 5 cut(s) 150, 273, 450, 482, 1013
HgaI GACGC 2 cut(s) 253, 1045
HhaI GCGC 1 cut(s) 1654
Hin1I GRCGYC 1 cut(s) 264
Hin6I GCGC 1 cut(s) 1652
HinP1I GCGC 1 cut(s) 1652
HpaII CCGG 5 cut(s) 150, 273, 450, 482, 1013
HphI GGTGA 6 cut(s) 454, 584, 1024, 1078, 1684, 1712
Hpy166II GTNNAC 1 cut(s) 70
Hpy188I TCNGA 9 cut(s) 135, 341, 615, 651, 1161, 1237, 1417, 1563, 1721
Hpy188III TCNNGA 4 cut(s) 97, 349, 655, 1060
Hpy8I GTNNAC 1 cut(s) 70
Hpy99I CGWCG 3 cut(s) 619, 1061, 1447
HpyAV CCTTC 2 cut(s) 652, 1561
HpyCH4III ACNGT 5 cut(s) 838, 951, 1589, 1633, 1729
HpyCH4IV ACGT 4 cut(s) 765, 999, 1332, 1445
HpyCH4V TGCA 9 cut(s) 10, 22, 91, 323, 405, 536, 731, 800, 1082
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 545, 1101
HpyF3I CTNAG 7 cut(s) 145, 240, 247, 924, 1234, 1533, 1776
HpySE526I ACGT 4 cut(s) 765, 999, 1332, 1445
Hsp92I GRCGYC 1 cut(s) 264
HspAI GCGC 1 cut(s) 1652
KpnI GGTACC 1 cut(s) 1156
Kzo9I GATC 4 cut(s) 651, 878, 1398, 1792
LguI GCTCTTC 3 cut(s) 71, 509, 863
LmnI GCTCC 2 cut(s) 44, 452
Lsp1109I GCAGC 6 cut(s) 34, 548, 715, 812, 1207, 1559
LweI GCATC 2 cut(s) 19, 504
MaeI CTAG 7 cut(s) 51, 359, 369, 503, 725, 909, 1470
MaeII ACGT 4 cut(s) 765, 999, 1332, 1445
MaeIII GTNAC 8 cut(s) 289, 460, 572, 886, 1066, 1363, 1504, 1636
MalI GATC 4 cut(s) 653, 880, 1400, 1794
MboI GATC 4 cut(s) 651, 878, 1398, 1792
MboII GAAGA 9 cut(s) 47, 88, 328, 484, 526, 863, 880, 1307, 1589
MhlI GDGCHC 4 cut(s) 218, 457, 939, 1387
MluCI AATT 9 cut(s) 61, 427, 747, 843, 1086, 1134, 1275, 1287, 1610
MmeI TCCRAC 3 cut(s) 204, 638, 772
MroXI GAANNNNTTC 1 cut(s) 476
MseI TTAA 3 cut(s) 774, 1005, 1797
MslI CAYNNNNRTG 6 cut(s) 404, 410, 467, 942, 1112, 1631
MspA1I CMGCKG 3 cut(s) 539, 553, 1775
MspI CCGG 5 cut(s) 150, 273, 450, 482, 1013
MspR9I CCNGG 2 cut(s) 301, 482
Mva1269I GAATGC 1 cut(s) 1325
MvaI CCWGG 1 cut(s) 301
MwoI GCNNNNNNNGC 3 cut(s) 261, 545, 1101
NciI CCSGG 1 cut(s) 482
NdeI CATATG 2 cut(s) 1196, 1339
NdeII GATC 4 cut(s) 651, 878, 1398, 1792
NheI GCTAGC 2 cut(s) 358, 1469
NlaIV GGNNCC 5 cut(s) 154, 938, 1105, 1154, 1805
NmeAIII GCCGAG 1 cut(s) 180
NmuCI GTSAC 4 cut(s) 289, 460, 572, 1066
NspI RCATGY 3 cut(s) 166, 403, 409
OliI CACNNNNGTG 1 cut(s) 467
PagI TCATGA 2 cut(s) 348, 654
PaqCI CACCTGC 1 cut(s) 473
PasI CCCWGGG 1 cut(s) 300
PciI ACATGT 2 cut(s) 162, 399
PciSI GCTCTTC 3 cut(s) 71, 509, 863
PctI GAATGC 1 cut(s) 1325
PdmI GAANNNNTTC 1 cut(s) 476
PfoI TCCNGGA 1 cut(s) 480
PkrI GCNGC 6 cut(s) 49, 538, 730, 802, 1222, 1549
PpuMI RGGWCCY 1 cut(s) 1804
PscI ACATGT 2 cut(s) 162, 399
PsiI TTATAA 2 cut(s) 746, 1710
Psp124BI GAGCTC 1 cut(s) 457
Psp5II RGGWCCY 1 cut(s) 1804
Psp6I CCWGG 1 cut(s) 299
PspEI GGTNACC 1 cut(s) 460
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 5 cut(s) 154, 938, 1105, 1154, 1805
PspPI GGNCC 2 cut(s) 1210, 1804
PspPPI RGGWCCY 1 cut(s) 1804
PvuII CAGCTG 3 cut(s) 539, 553, 1775
RsaI GTAC 7 cut(s) 410, 557, 1141, 1154, 1256, 1436, 1451
RsaNI GTAC 7 cut(s) 409, 556, 1140, 1153, 1255, 1435, 1450
RseI CAYNNNNRTG 6 cut(s) 404, 410, 467, 942, 1112, 1631
SacI GAGCTC 1 cut(s) 457
SapI GCTCTTC 3 cut(s) 71, 509, 863
SaqAI TTAA 3 cut(s) 774, 1005, 1797
SatI GCNGC 6 cut(s) 48, 537, 729, 801, 1221, 1548
Sau3AI GATC 4 cut(s) 651, 878, 1398, 1792
Sau96I GGNCC 2 cut(s) 1210, 1804
ScaI AGTACT 1 cut(s) 1436
ScrFI CCNGG 2 cut(s) 301, 482
SduI GDGCHC 4 cut(s) 218, 457, 939, 1387
SfaNI GCATC 2 cut(s) 19, 504
SfcI CTRYAG 1 cut(s) 804
SinI GGWCC 1 cut(s) 1804
SmiMI CAYNNNNRTG 6 cut(s) 404, 410, 467, 942, 1112, 1631
SmlI CTYRAG 2 cut(s) 686, 1430
SmoI CTYRAG 2 cut(s) 686, 1430
Sse9I AATT 9 cut(s) 61, 427, 747, 843, 1086, 1134, 1275, 1287, 1610
SsiI CCGC 2 cut(s) 991, 1010
SspI AATATT 2 cut(s) 1242, 1456
SspMI CTAG 7 cut(s) 51, 359, 369, 503, 725, 909, 1470
SstI GAGCTC 1 cut(s) 457
StyD4I CCNGG 2 cut(s) 299, 480
StyI CCWWGG 1 cut(s) 1096
TaaI ACNGT 5 cut(s) 838, 951, 1589, 1633, 1729
TaiI ACGT 4 cut(s) 768, 1002, 1335, 1448
TaqI TCGA 4 cut(s) 667, 899, 1059, 1442
TasI AATT 9 cut(s) 61, 427, 747, 843, 1086, 1134, 1275, 1287, 1610
TatI WGTACW 4 cut(s) 408, 1254, 1434, 1449
Tru1I TTAA 3 cut(s) 774, 1005, 1797
Tru9I TTAA 3 cut(s) 774, 1005, 1797
TscAI CASTG 3 cut(s) 843, 1365, 1795
TseFI GTSAC 4 cut(s) 289, 460, 572, 1066
TseI GCWGC 6 cut(s) 47, 536, 728, 800, 1220, 1547
Tsp45I GTSAC 4 cut(s) 289, 460, 572, 1066
TspDTI ATGAA 8 cut(s) 89, 117, 337, 625, 671, 960, 1609, 1758
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 3 cut(s) 843, 1365, 1795
VpaK11BI GGWCC 1 cut(s) 1804
XceI RCATGY 3 cut(s) 166, 403, 409
XcmI CCANNNNNNNNNTGG 3 cut(s) 566, 1114, 1220
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 7 cut(s) 51, 359, 369, 503, 725, 909, 1470
ZrmI AGTACT 1 cut(s) 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.