MD01G1127500.v1.1
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
23938397 .. 23940322
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1127500.v1.1.491

Sequence Viewer

Length: 1578 bp
ATGGCGGGAAAAGACAAAGCTGAAGGTCATGCAATCGGGATCGACCTGGGGACAACCTTCTCGTGTGTGGCGGTGTGGCAGTATGATCATGTAGAAATTATAGTGAACGATCAGGGTAGCAGGACAACTCCATCTCACGTTGCATTCACTGATGCCGAAATACTGGTTGGTGATGCTGCATTTAACCAGCTCATCAGAAACCCTTCCAACTCCATCTTTGATGCCAAGCGATTAATTGGTAGAAGATTTAGTGACTCATGTGTTCAAGATGATATTAAGTTGTGGCCTTTCAAGGTCATCGAAGGTCCTCATGATAAGCCTACGATTGTGGTCACTCACAAGGGCCAAGAGAAGCAGTTTGCTGCTGAAGAAATCTCATCAATGGTATTGGGAAAGATGCGAGAGATTGCTGAGGCCTTCCTCGGCTCAACTGTTAAGAGTGCGGTCGTCACAGTCCCTGCTTACTTCAGTGACTCACAGCGTCAGGCTACAAAAAATGCAGCTATGAGTGCCGGCCTAAAGGTGCTGCGTGTCATCAATGAACCGACTGCTGCAGCCATTGCTTATGGCCTTGACAAGAAGGCTGGCTGGTACAGCAAGAGAAATGTTATGATGTTTGATTTTGGTGGCGGTACTTTAGATGTGTCGCTAGTTACCATTAGTTGCGGCATGTTTGATGTGAAAGCCACTGCTGGGGATACTCACCTTGGAGGTGAAGACCTAGATAACAGAATGGTGAATTACTGTGTGGAGCAATTCAAGAGGAAGAATAACTTAGACGTGACTGGAAACTCCAAAGCACTTAGGAGGTTAAAAAATAGTTGTGAGAAAGCAAAGAGGAGACTTTCATTTACGTCTTCAACAGACATTGAAATTGACTGTTTGCACGAGGGTAATGATTTTTATACAACTATTACTCGGGCCAAATTTGAAGAACTCAATAGGGATTTCTTTATCAAGTGTATGGAGCCAGTGAACAAGTGTTTGGAGGATGCTAAATTGGACGTCAGCAGCATCCACGATGTTGTTCTTGTTGGTGGCTCTTCGAGAATTCCTAAGGTGCAAGAACTCTTAAAAAATGTCTTCAAGGGTAAGGAGTTGTGTAAAGGCATTAATCCGGATGAGGCAGTGGCTTACGGTGCTGCTGTTCAGGCTGCAGTCCTGAACGGGAAGGGAAATGAAAAGCTTCAAGACCTCACTTTGTTGGATGTCACACCGCTATCACTCGGGGTGGAGACTGGGTGTGAACGGGACATGACTGTTGTGATACCAAGAAACACCAAAATGCCCGTCAAGAGGAATTATACTGTTACCACTCGGCATGACAACCAAGCAGTTGTTAGATTTGCCGTCTATGAAGGCGAGAGTACAACAACAGTGAATAATTACTTTCTGGGTGATTTTAGGCTCAAAGACATTCCTCCAGCTCCGAGGGGTGTTCCTAAATTCAATATTGTCTTTGATATTGATTCCAATGGGATTCTGAACGTATGTGCTGAAGACATGTTGACTGGCCAGAAGAAGGGGATAACTCTCACAAATGACACAACTTGTGAAGGAATTGAAAGAATAATGTAA
Functional Annotation

Protein Analysis

526

Amino Acids

57.78

Weight (kDa)

6.36

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 11 - 517 6.6e-202 Hsp70 protein
MreB_Mbl PF06723 145 - 383 8.4e-16 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1008
AccIII TCCGGA 1 cut(s) 1117
AciI CCGC 6 cut(s) 5, 71, 443, 630, 666, 1217
AclWI GGATC 1 cut(s) 47
AcoI YGGCCR 1 cut(s) 1513
AcsI RAATTY 3 cut(s) 926, 1050, 1445
AcuI CTGAAG 4 cut(s) 42, 387, 451, 1518
AcyI GRCGYC 1 cut(s) 1005
AfaI GTAC 3 cut(s) 593, 634, 1369
AfiI CCNNNNNNNGG 3 cut(s) 693, 1296, 1522
AflIII ACRYGT 1 cut(s) 1503
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 1 cut(s) 45
AjuI GAANNNNNNNTTGG 4 cut(s) 150, 182, 968, 1000
AluBI AGCT 5 cut(s) 20, 190, 503, 1186, 1427
AluI AGCT 5 cut(s) 20, 190, 503, 1186, 1427
Alw26I GTCTC 2 cut(s) 835, 1229
AlwI GGATC 1 cut(s) 47
AlwNI CAGNNNCTG 1 cut(s) 458
Ama87I CYCGRG 2 cut(s) 918, 1226
Aor13HI TCCGGA 1 cut(s) 1117
AoxI GGCC 7 cut(s) 284, 343, 414, 514, 568, 921, 1513
ApeKI GCWGC 9 cut(s) 176, 362, 500, 526, 551, 554, 1011, 1142, 1154
ApoI RAATTY 3 cut(s) 926, 1050, 1445
ArsI GACNNNNNNTTYG 2 cut(s) 1275, 1307
AseI ATTAAT 2 cut(s) 233, 1113
Asp700I GAANNNNTTC 2 cut(s) 202, 1185
AspS9I GGNCC 3 cut(s) 305, 343, 921
AsuHPI GGTGA 5 cut(s) 182, 695, 725, 748, 1409
AvaI CYCGRG 2 cut(s) 918, 1226
AvaII GGWCC 1 cut(s) 305
AxyI CCTNAGG 1 cut(s) 1056
BalI TGGCCA 1 cut(s) 1515
BauI CACGAG 2 cut(s) 61, 887
BbsI GAAGAC 4 cut(s) 723, 849, 1075, 1506
BbvCI CCTCAGC 1 cut(s) 411
BbvI GCAGC 9 cut(s) 163, 349, 512, 513, 538, 566, 1023, 1129, 1141
BccI CCATC 2 cut(s) 139, 221
BceAI ACGGC 1 cut(s) 1334
BciT130I CCWGG 1 cut(s) 47
BciVI GTATCC 1 cut(s) 691
BclI TGATCA 1 cut(s) 85
BcoDI GTCTC 2 cut(s) 835, 1229
BfaI CTAG 2 cut(s) 650, 722
BfmI CTRYAG 2 cut(s) 552, 1155
BfuI GTATCC 1 cut(s) 691
Bme1390I CCNGG 1 cut(s) 47
Bme18I GGWCC 1 cut(s) 305
BmeT110I CYCGRG 2 cut(s) 918, 1226
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 3 cut(s) 305, 343, 921
BmiI GGNNCC 1 cut(s) 969
BmrFI CCNGG 1 cut(s) 47
BmrI ACTGGG 1 cut(s) 1248
BmsI GCATC 6 cut(s) 142, 163, 211, 387, 982, 1023
BmuI ACTGGG 1 cut(s) 1248
BpiI GAAGAC 4 cut(s) 723, 849, 1075, 1506
BpmI CTGGAG 1 cut(s) 1407
Bpu10I CCTNAGC 1 cut(s) 411
BsaHI GRCGYC 1 cut(s) 1005
BsaJI CCNNGG 4 cut(s) 46, 421, 706, 1430
BsaWI WCCGGW 1 cut(s) 1117
BsaXI ACNNNNNCTCC 2 cut(s) 1226, 1256
Bsc4I CCNNNNNNNGG 3 cut(s) 693, 1296, 1522
Bse118I RCCGGY 1 cut(s) 512
Bse1I ACTGG 5 cut(s) 168, 790, 971, 1243, 1516
Bse21I CCTNAGG 1 cut(s) 1056
Bse3DI GCAATG 1 cut(s) 558
BseAI TCCGGA 1 cut(s) 1117
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 4 cut(s) 46, 421, 706, 1430
BseGI GGATG 4 cut(s) 997, 1014, 1126, 1213
BseLI CCNNNNNNNGG 3 cut(s) 693, 1296, 1522
BseMI GCAATG 1 cut(s) 558
BseMII CTCAG 1 cut(s) 402
BseNI ACTGG 5 cut(s) 168, 790, 971, 1243, 1516
BseRI GAGGAG 1 cut(s) 853
BseXI GCAGC 9 cut(s) 163, 349, 512, 513, 538, 566, 1023, 1129, 1141
BseYI CCCAGC 1 cut(s) 692
Bsh1285I CGRYCG 1 cut(s) 447
BshFI GGCC 7 cut(s) 286, 345, 416, 516, 570, 923, 1515
BsiEI CGRYCG 1 cut(s) 447
BsiHKCI CYCGRG 2 cut(s) 918, 1226
BsiSI CCGG 2 cut(s) 513, 1118
BslFI GGGAC 3 cut(s) 64, 440, 1265
BslI CCNNNNNNNGG 3 cut(s) 693, 1296, 1522
BsmAI GTCTC 2 cut(s) 835, 1229
BsmFI GGGAC 3 cut(s) 64, 440, 1265
BsmI GAATGC 1 cut(s) 143
BsnI GGCC 7 cut(s) 286, 345, 416, 516, 570, 923, 1515
BsoBI CYCGRG 2 cut(s) 918, 1226
Bsp13I TCCGGA 1 cut(s) 1117
Bsp143I GATC 3 cut(s) 39, 85, 109
BspACI CCGC 6 cut(s) 5, 71, 443, 630, 666, 1217
BspANI GGCC 7 cut(s) 286, 345, 416, 516, 570, 923, 1515
BspCNI CTCAG 1 cut(s) 403
BspEI TCCGGA 1 cut(s) 1117
BspHI TCATGA 1 cut(s) 310
BspLI GGNNCC 1 cut(s) 969
BspMAI CTGCAG 2 cut(s) 556, 1159
BspPI GGATC 1 cut(s) 47
BspQI GCTCTTC 1 cut(s) 1048
BsrDI GCAATG 1 cut(s) 558
BsrFI RCCGGY 1 cut(s) 512
BsrI ACTGG 5 cut(s) 168, 790, 971, 1243, 1516
BssAI RCCGGY 1 cut(s) 512
BssECI CCNNGG 4 cut(s) 46, 421, 706, 1430
BssMI GATC 3 cut(s) 39, 85, 109
BssNI GRCGYC 1 cut(s) 1005
BssSI CACGAG 2 cut(s) 61, 887
BssT1I CCWWGG 1 cut(s) 706
Bst2BI CACGAG 2 cut(s) 61, 887
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 8 cut(s) 433, 454, 746, 881, 1139, 1261, 1309, 1378
Bst6I CTCTTC 1 cut(s) 1048
BstACI GRCGYC 1 cut(s) 1005
BstAPI GCANNNNNTGC 1 cut(s) 560
BstC8I GCNNGC 2 cut(s) 514, 586
BstDEI CTNAG 4 cut(s) 411, 775, 803, 1056
BstF5I GGATG 4 cut(s) 997, 1014, 1126, 1213
BstKTI GATC 3 cut(s) 42, 88, 112
BstMAI GTCTC 2 cut(s) 835, 1229
BstMBI GATC 3 cut(s) 39, 85, 109
BstMCI CGRYCG 1 cut(s) 447
BstMWI GCNNNNNNNGC 5 cut(s) 509, 560, 594, 1139, 1151
BstNI CCWGG 1 cut(s) 47
BstNSI RCATGY 2 cut(s) 673, 1507
BstSCI CCNGG 1 cut(s) 45
BstSFI CTRYAG 2 cut(s) 552, 1155
BstV1I GCAGC 9 cut(s) 163, 349, 512, 513, 538, 566, 1023, 1129, 1141
BstV2I GAAGAC 4 cut(s) 723, 849, 1075, 1506
Bsu36I CCTNAGG 1 cut(s) 1056
BsuI GTATCC 1 cut(s) 691
BsuRI GGCC 7 cut(s) 286, 345, 416, 516, 570, 923, 1515
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 4 cut(s) 997, 1014, 1126, 1213
BtsI GCAGTG 2 cut(s) 687, 1134
BtsIMutI CAGTG 6 cut(s) 147, 475, 687, 978, 1134, 1383
Cac8I GCNNGC 2 cut(s) 514, 586
CaiI CAGNNNCTG 1 cut(s) 458
CciI TCATGA 1 cut(s) 310
Cfr10I RCCGGY 1 cut(s) 512
Cfr13I GGNCC 3 cut(s) 305, 343, 921
CseI GACGC 1 cut(s) 470
Csp6I GTAC 3 cut(s) 592, 633, 1368
CviAII CATG 8 cut(s) 29, 89, 258, 311, 670, 1255, 1322, 1504
CviQI GTAC 3 cut(s) 592, 633, 1368
DdeI CTNAG 4 cut(s) 411, 775, 803, 1056
DpnI GATC 3 cut(s) 41, 87, 111
DpnII GATC 3 cut(s) 39, 85, 109
EaeI YGGCCR 1 cut(s) 1513
Eam1104I CTCTTC 1 cut(s) 1048
EarI CTCTTC 1 cut(s) 1048
Eco130I CCWWGG 1 cut(s) 706
Eco147I AGGCCT 1 cut(s) 416
Eco47I GGWCC 1 cut(s) 305
Eco57I CTGAAG 4 cut(s) 42, 387, 451, 1518
Eco81I CCTNAGG 1 cut(s) 1056
Eco88I CYCGRG 2 cut(s) 918, 1226
EcoO109I RGGNCCY 1 cut(s) 305
EcoRI GAATTC 1 cut(s) 1050
EcoRII CCWGG 1 cut(s) 45
EcoT14I CCWWGG 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 706
FaeI CATG 8 cut(s) 32, 92, 261, 314, 673, 1258, 1325, 1507
FalI AAGNNNNNCTT 2 cut(s) 758, 790
FaqI GGGAC 3 cut(s) 64, 440, 1265
FatI CATG 8 cut(s) 28, 88, 257, 310, 669, 1254, 1321, 1503
FbaI TGATCA 1 cut(s) 85
FokI GGATG 4 cut(s) 1001, 1004, 1133, 1220
FspBI CTAG 2 cut(s) 650, 722
GsaI CCCAGC 1 cut(s) 696
GsuI CTGGAG 1 cut(s) 1407
HaeIII GGCC 7 cut(s) 286, 345, 416, 516, 570, 923, 1515
HapII CCGG 2 cut(s) 513, 1118
HgaI GACGC 1 cut(s) 470
Hin1I GRCGYC 1 cut(s) 1005
Hin1II CATG 8 cut(s) 32, 92, 261, 314, 673, 1258, 1325, 1507
HincII GTYRAC 1 cut(s) 1509
HindII GTYRAC 1 cut(s) 1509
HindIII AAGCTT 1 cut(s) 1184
HinfI GANTC 4 cut(s) 254, 473, 1469, 1480
HpaII CCGG 2 cut(s) 513, 1118
HphI GGTGA 5 cut(s) 182, 695, 725, 748, 1409
Hpy166II GTNNAC 4 cut(s) 106, 976, 1247, 1509
Hpy188I TCNGA 3 cut(s) 197, 1431, 1485
Hpy188III TCNNGA 9 cut(s) 37, 266, 311, 760, 1047, 1118, 1162, 1190, 1294
Hpy8I GTNNAC 4 cut(s) 106, 976, 1247, 1509
HpyCH4III ACNGT 8 cut(s) 433, 454, 746, 881, 1139, 1261, 1309, 1378
HpyCH4IV ACGT 5 cut(s) 138, 780, 854, 1005, 1488
HpyCH4V TGCA 8 cut(s) 32, 143, 179, 500, 554, 886, 1063, 1157
HpyF10VI GCNNNNNNNGC 5 cut(s) 509, 560, 594, 1139, 1151
HpyF3I CTNAG 4 cut(s) 411, 775, 803, 1056
HpySE526I ACGT 5 cut(s) 138, 780, 854, 1005, 1488
Hsp92I GRCGYC 1 cut(s) 1005
Hsp92II CATG 8 cut(s) 32, 92, 261, 314, 673, 1258, 1325, 1507
Kpn2I TCCGGA 1 cut(s) 1117
KroI GCCGGC 1 cut(s) 512
KroNI GCCGGC 1 cut(s) 514
Ksp22I TGATCA 1 cut(s) 85
Kzo9I GATC 3 cut(s) 39, 85, 109
LguI GCTCTTC 1 cut(s) 1048
LmnI GCTCC 3 cut(s) 751, 967, 1432
Lsp1109I GCAGC 9 cut(s) 163, 349, 512, 513, 538, 566, 1023, 1129, 1141
LweI GCATC 6 cut(s) 142, 163, 211, 387, 982, 1023
MaeI CTAG 2 cut(s) 650, 722
MaeII ACGT 5 cut(s) 138, 780, 854, 1005, 1488
MaeIII GTNAC 8 cut(s) 251, 331, 448, 470, 652, 781, 1210, 1309
MalI GATC 3 cut(s) 41, 87, 111
MboI GATC 3 cut(s) 39, 85, 109
MlsI TGGCCA 1 cut(s) 1515
MluNI TGGCCA 1 cut(s) 1515
MlyI GAGTC 2 cut(s) 248, 467
MmeI TCCRAC 2 cut(s) 231, 1185
Mox20I TGGCCA 1 cut(s) 1515
MroI TCCGGA 1 cut(s) 1117
MroNI GCCGGC 1 cut(s) 512
MroXI GAANNNNTTC 2 cut(s) 202, 1185
MscI TGGCCA 1 cut(s) 1515
MseI TTAA 7 cut(s) 183, 233, 276, 435, 812, 1073, 1113
MslI CAYNNNNRTG 1 cut(s) 1283
Msp20I TGGCCA 1 cut(s) 1515
MspI CCGG 2 cut(s) 513, 1118
MspR9I CCNGG 1 cut(s) 47
Mva1269I GAATGC 1 cut(s) 143
MvaI CCWGG 1 cut(s) 47
MwoI GCNNNNNNNGC 5 cut(s) 509, 560, 594, 1139, 1151
NaeI GCCGGC 1 cut(s) 514
NdeII GATC 3 cut(s) 39, 85, 109
NgoMIV GCCGGC 1 cut(s) 512
NlaIII CATG 8 cut(s) 32, 92, 261, 314, 673, 1258, 1325, 1507
NlaIV GGNNCC 1 cut(s) 969
NmeAIII GCCGAG 2 cut(s) 402, 1297
NmuCI GTSAC 6 cut(s) 251, 331, 448, 470, 781, 1210
NspI RCATGY 2 cut(s) 673, 1507
PagI TCATGA 1 cut(s) 310
PceI AGGCCT 1 cut(s) 416
PciI ACATGT 1 cut(s) 1503
PciSI GCTCTTC 1 cut(s) 1048
PctI GAATGC 1 cut(s) 143
PdiI GCCGGC 1 cut(s) 514
PdmI GAANNNNTTC 2 cut(s) 202, 1185
PfeI GAWTC 2 cut(s) 1469, 1480
PleI GAGTC 2 cut(s) 248, 467
PpsI GAGTC 2 cut(s) 248, 467
PpuMI RGGWCCY 1 cut(s) 305
PscI ACATGT 1 cut(s) 1503
PshBI ATTAAT 2 cut(s) 233, 1113
Psp5II RGGWCCY 1 cut(s) 305
Psp6I CCWGG 1 cut(s) 45
PspFI CCCAGC 1 cut(s) 692
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 1 cut(s) 969
PspPI GGNCC 3 cut(s) 305, 343, 921
PspPPI RGGWCCY 1 cut(s) 305
PstI CTGCAG 2 cut(s) 556, 1159
PstNI CAGNNNCTG 1 cut(s) 458
RsaI GTAC 3 cut(s) 593, 634, 1369
RsaNI GTAC 3 cut(s) 592, 633, 1368
RseI CAYNNNNRTG 1 cut(s) 1283
SapI GCTCTTC 1 cut(s) 1048
SaqAI TTAA 7 cut(s) 183, 233, 276, 435, 812, 1073, 1113
Sau3AI GATC 3 cut(s) 39, 85, 109
Sau96I GGNCC 3 cut(s) 305, 343, 921
SchI GAGTC 2 cut(s) 248, 467
ScrFI CCNGG 1 cut(s) 47
SfaNI GCATC 6 cut(s) 142, 163, 211, 387, 982, 1023
SfcI CTRYAG 2 cut(s) 552, 1155
SinI GGWCC 1 cut(s) 305
SmiMI CAYNNNNRTG 1 cut(s) 1283
SseBI AGGCCT 1 cut(s) 416
SsiI CCGC 6 cut(s) 5, 71, 443, 630, 666, 1217
SspI AATATT 1 cut(s) 1453
SspMI CTAG 2 cut(s) 650, 722
StuI AGGCCT 1 cut(s) 416
StyD4I CCNGG 1 cut(s) 45
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 8 cut(s) 433, 454, 746, 881, 1139, 1261, 1309, 1378
TaiI ACGT 5 cut(s) 141, 783, 857, 1008, 1491
TaqI TCGA 3 cut(s) 42, 300, 1046
TatI WGTACW 1 cut(s) 1367
TauI GCSGC 1 cut(s) 669
TfiI GAWTC 2 cut(s) 1469, 1480
Tru1I TTAA 7 cut(s) 183, 233, 276, 435, 812, 1073, 1113
Tru9I TTAA 7 cut(s) 183, 233, 276, 435, 812, 1073, 1113
TscAI CASTG 6 cut(s) 154, 475, 694, 978, 1134, 1383
TseFI GTSAC 6 cut(s) 251, 331, 448, 470, 781, 1210
TseI GCWGC 9 cut(s) 176, 362, 500, 526, 551, 554, 1011, 1142, 1154
Tsp45I GTSAC 6 cut(s) 251, 331, 448, 470, 781, 1210
TspDTI ATGAA 4 cut(s) 555, 837, 1194, 1371
TspRI CASTG 6 cut(s) 154, 475, 694, 978, 1134, 1383
VpaK11BI GGWCC 1 cut(s) 305
VspI ATTAAT 2 cut(s) 233, 1113
XapI RAATTY 3 cut(s) 926, 1050, 1445
XceI RCATGY 2 cut(s) 673, 1507
XmnI GAANNNNTTC 2 cut(s) 202, 1185
XspI CTAG 2 cut(s) 650, 722
ZraI GACGTC 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.