Rroxscaffold_4G00289750
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
10382817 .. 10386525
3709 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00289750.1

Sequence Viewer

Length: 1587 bp
ATGGGCGGAGGAGGAGAGGGTCATGCAATAGGGATTGACTTGGGGACAACCTATTCATGCGTAGCAGTGTGGGAGCACGAGCATGTAGAAATCATAGTGAATGATCAAGGAAACAGGACAACTCCATCTTATGTTGCCTTTACTGACTCGGAGCTTTTCGTAGGCGACGCTGCATTTAACCAGATCATTAAAAATCCCACAAACTCAATCTTCGATGCAAAGCGTTTAATAGGCAGGAGATATAGTGATGCCTCAGTTCAAAATGATATTAAACTCTGGCCATTCAAGGTTATTGAAGGTCCTGCTGAGAAGCCCATGATTGTAGTTACCCACAAGGGCGAAGAGAAACAATTTGCTGCTGAACAAATCTCATCTATGGTTCTTGAAAAGATGCGGGAAATTGCTGAGGCCTATCTTGGTTCACCTGTGAAAAATGCAGTTATCACCGTCCCTGCCTACTTCAATAATTCACAGCGTCAGGCTACAAATGATGCCGCAGTCACTGCTGGCCTAAACGTGATGCGTATCATCAACGAACCAACTGCAGCAGCTATTGCTTATGGACTTGACAGAAAGGGCGGCTGGTATAGCAAGAGAAATGTTATGATATTTGATTTCGGCGGTGGTACACTAGATGTGTCATTGCTTACAATAGGTGATGGTATATTCGAAGTGAAGGCTACAGCTGGAGACACTCACCTTGGAGGTGAAGATCTTGATAACAGAATGGTGAGCTATTGTGTTGAGGAATTCAAGAAAAAGCACAATCTAGACATCACTGGAAACTTTAGAGCTCTTAGGAGGTTAAGAAATGCATGTGAGAAGGCAAAGAGGAGACTTTCATTTGCTTCCATAGTTGACATTGAAATTGATTGTTTGGATTTCTATACAAGTATCACTAGAGCCAAGTTTGAACAACTCAACAAAGACTTGTTCAACAAGTGCATGGACCCTGTGAGAAAGTGTTTAAGCGATGCTAAAATGAAGATAAGCAATGTCCATGATGTTGTTCTTGCGGGTGGCTCTTCTAGAATTCCTAAAGTGCAAGAACTATTAAAAGATGTCTTCAAAGGGAAGGAGCTGTGCAAGGGAGTTAATCCAGATGAGGCAATCGCCTATGGAGCTGCGGTTCAAGCTGCAGTTTTGAAAGGCCATCAAGATCGGACACTTCAAGACTTCGCTCTCTTGGATGTCACCCCTCTGTCACTCGGGTTGGAGAGTCGCACACTTGATACGCTTGAGAAATACATGAATGTTTTGATTCCAAAGAACACTAGAATACCTGTGATGAAGAGCAAAATTATAACTACTATATATGACAACCAAGAGTCGGTCGTATTCCCCATATATGAGGGTGAGTGTAGAATAGTCAAAGAAAATTACTTTGTGGGCGAAGTTAGCCTCTGCAACATTCCTCTGGCTCCCAAGAATGTTCCTAAGTTCAATCTTTGCTTTAATATTGATGCAAGTGGTATCCTGCGTGTCTCAGCAGAGGACATGACTACTGGGCAGAGGAAAGAGATTACGATCAACAGTGACAGAAGAAATTTGGGAATTGAGAACGAGAGAATTGCTGACATCGACTAG
Functional Annotation

Protein Analysis

528

Amino Acids

58.54

Weight (kDa)

6.02

Isoelectric Point (pI)

36.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 515 1.3e-198 Hsp70 protein
MreB_Mbl PF06723 127 - 377 7.3e-15 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1304
AciI CCGC 7 cut(s) 6, 394, 495, 579, 621, 1016, 1127
AcoI YGGCCR 1 cut(s) 278
AcsI RAATTY 3 cut(s) 749, 1032, 1546
AfaI GTAC 1 cut(s) 628
AfiI CCNNNNNNNGG 1 cut(s) 1330
AloI GAACNNNNNNTCC 2 cut(s) 1113, 1145
AluBI AGCT 8 cut(s) 154, 551, 686, 735, 794, 1081, 1124, 1136
AluI AGCT 8 cut(s) 154, 551, 686, 735, 794, 1081, 1124, 1136
Alw21I GWGCWC 2 cut(s) 78, 796
Alw26I GTCTC 3 cut(s) 684, 829, 1489
AlwNI CAGNNNCTG 1 cut(s) 503
Ama87I CYCGRG 1 cut(s) 1208
AoxI GGCC 4 cut(s) 278, 408, 508, 1150
ApeKI GCWGC 6 cut(s) 170, 356, 545, 548, 1124, 1136
ApoI RAATTY 3 cut(s) 749, 1032, 1546
AspS9I GGNCC 2 cut(s) 299, 949
AsuHPI GGTGA 8 cut(s) 414, 436, 668, 689, 719, 742, 1186, 1367
AsuII TTCGAA 1 cut(s) 669
AvaI CYCGRG 1 cut(s) 1208
AvaII GGWCC 2 cut(s) 299, 949
BalI TGGCCA 1 cut(s) 280
BanII GRGCYC 1 cut(s) 796
BauI CACGAG 1 cut(s) 77
BbsI GAAGAC 1 cut(s) 1057
Bbv12I GWGCWC 2 cut(s) 78, 796
BbvCI CCTCAGC 1 cut(s) 405
BbvI GCAGC 6 cut(s) 157, 343, 557, 560, 1111, 1123
BccI CCATC 3 cut(s) 133, 653, 1161
BcgI CGANNNNNNTGC 4 cut(s) 524, 558, 1553, 1587
BciVI GTATCC 1 cut(s) 1484
BclI TGATCA 1 cut(s) 103
BcoDI GTCTC 3 cut(s) 684, 829, 1489
BfaI CTAG 6 cut(s) 632, 770, 900, 1029, 1275, 1585
BfmI CTRYAG 3 cut(s) 543, 681, 1137
BfuI GTATCC 1 cut(s) 1484
BglII AGATCT 1 cut(s) 712
BisI GCNGC 8 cut(s) 171, 357, 495, 546, 549, 580, 1125, 1137
BlsI GCNGC 8 cut(s) 172, 358, 496, 547, 550, 581, 1126, 1138
Bme18I GGWCC 2 cut(s) 299, 949
BmeT110I CYCGRG 1 cut(s) 1208
BmgT120I GGNCC 2 cut(s) 299, 949
BmiI GGNNCC 2 cut(s) 951, 1422
BmrI ACTGGG 1 cut(s) 1515
BmsI GCATC 7 cut(s) 205, 238, 381, 481, 510, 964, 1453
BmuI ACTGGG 1 cut(s) 1515
BpiI GAAGAC 1 cut(s) 1057
BpmI CTGGAG 1 cut(s) 708
Bpu10I CCTNAGC 1 cut(s) 405
Bpu14I TTCGAA 1 cut(s) 669
BpuEI CTTGAG 1 cut(s) 1259
BsaBI GATNNNNATC 2 cut(s) 524, 1526
BsaJI CCNNGG 1 cut(s) 700
BsaXI ACNNNNNCTCC 4 cut(s) 229, 259, 1113, 1143
Bsc4I CCNNNNNNNGG 1 cut(s) 1330
Bse1I ACTGG 2 cut(s) 784, 1510
Bse3DI GCAATG 2 cut(s) 641, 1000
Bse8I GATNNNNATC 2 cut(s) 524, 1526
BseDI CCNNGG 1 cut(s) 700
BseGI GGATG 1 cut(s) 1195
BseJI GATNNNNATC 2 cut(s) 524, 1526
BseLI CCNNNNNNNGG 1 cut(s) 1330
BseMI GCAATG 2 cut(s) 641, 1000
BseMII CTCAG 4 cut(s) 267, 297, 396, 1500
BseNI ACTGG 2 cut(s) 784, 1510
BseRI GAGGAG 3 cut(s) 24, 27, 847
BseXI GCAGC 6 cut(s) 157, 343, 557, 560, 1111, 1123
Bsh1285I CGRYCG 1 cut(s) 1335
BshFI GGCC 4 cut(s) 280, 410, 510, 1152
BsiEI CGRYCG 1 cut(s) 1335
BsiHKAI GWGCWC 2 cut(s) 78, 796
BsiHKCI CYCGRG 1 cut(s) 1208
BslFI GGGAC 2 cut(s) 58, 434
BslI CCNNNNNNNGG 1 cut(s) 1330
BsmAI GTCTC 3 cut(s) 684, 829, 1489
BsmFI GGGAC 2 cut(s) 58, 434
BsnI GGCC 4 cut(s) 280, 410, 510, 1152
BsoBI CYCGRG 1 cut(s) 1208
Bsp119I TTCGAA 1 cut(s) 669
Bsp1286I GDGCHC 2 cut(s) 78, 796
Bsp143I GATC 5 cut(s) 103, 183, 712, 1159, 1527
BspACI CCGC 7 cut(s) 6, 394, 495, 579, 621, 1016, 1127
BspANI GGCC 4 cut(s) 280, 410, 510, 1152
BspCNI CTCAG 4 cut(s) 266, 298, 397, 1499
BspLI GGNNCC 2 cut(s) 951, 1422
BspMAI CTGCAG 2 cut(s) 547, 1141
BspQI GCTCTTC 2 cut(s) 1030, 1286
BspT104I TTCGAA 1 cut(s) 669
BsrDI GCAATG 2 cut(s) 641, 1000
BsrI ACTGG 2 cut(s) 784, 1510
BssECI CCNNGG 1 cut(s) 700
BssMI GATC 5 cut(s) 103, 183, 712, 1159, 1527
BssSI CACGAG 1 cut(s) 77
BssT1I CCWWGG 1 cut(s) 700
Bst2BI CACGAG 1 cut(s) 77
Bst4CI ACNGT 2 cut(s) 448, 1535
Bst6I CTCTTC 3 cut(s) 336, 1030, 1286
BstAPI GCANNNNNTGC 2 cut(s) 503, 554
BstBI TTCGAA 1 cut(s) 669
BstC8I GCNNGC 1 cut(s) 508
BstDEI CTNAG 6 cut(s) 253, 306, 405, 797, 1437, 1486
BstF5I GGATG 1 cut(s) 1195
BstKTI GATC 5 cut(s) 106, 186, 715, 1162, 1530
BstMAI GTCTC 3 cut(s) 684, 829, 1489
BstMBI GATC 5 cut(s) 103, 183, 712, 1159, 1527
BstMCI CGRYCG 1 cut(s) 1335
BstMWI GCNNNNNNNGC 6 cut(s) 503, 554, 588, 1121, 1133, 1398
BstNSI RCATGY 2 cut(s) 86, 819
BstSFI CTRYAG 3 cut(s) 543, 681, 1137
BstV1I GCAGC 6 cut(s) 157, 343, 557, 560, 1111, 1123
BstV2I GAAGAC 1 cut(s) 1057
BstX2I RGATCY 1 cut(s) 712
BstYI RGATCY 1 cut(s) 712
BsuI GTATCC 1 cut(s) 1484
BsuRI GGCC 4 cut(s) 280, 410, 510, 1152
BtgZI GCGATG 1 cut(s) 987
BtsCI GGATG 1 cut(s) 1195
BtsI GCAGTG 2 cut(s) 72, 501
BtsIMutI CAGTG 4 cut(s) 72, 501, 777, 1540
Cac8I GCNNGC 1 cut(s) 508
CaiI CAGNNNCTG 1 cut(s) 503
Cfr13I GGNCC 2 cut(s) 299, 949
CseI GACGC 2 cut(s) 176, 464
Csp6I GTAC 1 cut(s) 627
CviAII CATG 9 cut(s) 23, 57, 83, 316, 816, 946, 1001, 1249, 1498
CviQI GTAC 1 cut(s) 627
DdeI CTNAG 6 cut(s) 253, 306, 405, 797, 1437, 1486
DpnI GATC 5 cut(s) 105, 185, 714, 1161, 1529
DpnII GATC 5 cut(s) 103, 183, 712, 1159, 1527
EaeI YGGCCR 1 cut(s) 278
Eam1104I CTCTTC 3 cut(s) 336, 1030, 1286
EarI CTCTTC 3 cut(s) 336, 1030, 1286
EciI GGCGGA 1 cut(s) 21
Ecl136II GAGCTC 1 cut(s) 794
Eco130I CCWWGG 1 cut(s) 700
Eco147I AGGCCT 1 cut(s) 410
Eco24I GRGCYC 1 cut(s) 796
Eco47I GGWCC 2 cut(s) 299, 949
Eco53kI GAGCTC 1 cut(s) 794
Eco88I CYCGRG 1 cut(s) 1208
EcoICRI GAGCTC 1 cut(s) 794
EcoO109I RGGNCCY 1 cut(s) 299
EcoRI GAATTC 2 cut(s) 749, 1032
EcoT14I CCWWGG 1 cut(s) 700
EcoT22I ATGCAT 1 cut(s) 817
EcoT38I GRGCYC 1 cut(s) 796
ErhI CCWWGG 1 cut(s) 700
FaeI CATG 9 cut(s) 26, 60, 86, 319, 819, 949, 1004, 1252, 1501
FaqI GGGAC 2 cut(s) 58, 434
FatI CATG 9 cut(s) 22, 56, 82, 315, 815, 945, 1000, 1248, 1497
FauI CCCGC 2 cut(s) 387, 1009
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 8 cut(s) 171, 357, 495, 546, 549, 580, 1125, 1137
FokI GGATG 1 cut(s) 1202
FriOI GRGCYC 1 cut(s) 796
Fsp4HI GCNGC 8 cut(s) 171, 357, 495, 546, 549, 580, 1125, 1137
FspBI CTAG 6 cut(s) 632, 770, 900, 1029, 1275, 1585
GluI GCNGC 8 cut(s) 171, 357, 495, 546, 549, 580, 1125, 1137
GsuI CTGGAG 1 cut(s) 708
HaeIII GGCC 4 cut(s) 280, 410, 510, 1152
HgaI GACGC 2 cut(s) 176, 464
Hin1II CATG 9 cut(s) 26, 60, 86, 319, 819, 949, 1004, 1252, 1501
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HinfI GANTC 4 cut(s) 146, 1219, 1261, 1328
HphI GGTGA 8 cut(s) 414, 436, 668, 689, 719, 742, 1186, 1367
Hpy166II GTNNAC 3 cut(s) 422, 629, 859
Hpy188I TCNGA 2 cut(s) 151, 1164
Hpy188III TCNNGA 8 cut(s) 383, 716, 754, 770, 1029, 1100, 1157, 1172
Hpy8I GTNNAC 3 cut(s) 422, 629, 859
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 4 cut(s) 290, 670, 817, 1069
HpyCH4III ACNGT 2 cut(s) 448, 1535
HpyCH4IV ACGT 1 cut(s) 516
HpyF10VI GCNNNNNNNGC 6 cut(s) 503, 554, 588, 1121, 1133, 1398
HpyF3I CTNAG 6 cut(s) 253, 306, 405, 797, 1437, 1486
HpySE526I ACGT 1 cut(s) 516
Hsp92II CATG 9 cut(s) 26, 60, 86, 319, 819, 949, 1004, 1252, 1501
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 5 cut(s) 103, 183, 712, 1159, 1527
LguI GCTCTTC 2 cut(s) 1030, 1286
LmnI GCTCC 5 cut(s) 73, 151, 1078, 1121, 1426
Lsp1109I GCAGC 6 cut(s) 157, 343, 557, 560, 1111, 1123
LweI GCATC 7 cut(s) 205, 238, 381, 481, 510, 964, 1453
MaeI CTAG 6 cut(s) 632, 770, 900, 1029, 1275, 1585
MaeII ACGT 1 cut(s) 516
MaeIII GTNAC 5 cut(s) 325, 499, 1192, 1203, 1535
MalI GATC 5 cut(s) 105, 185, 714, 1161, 1529
MboI GATC 5 cut(s) 103, 183, 712, 1159, 1527
MboII GAAGA 8 cut(s) 202, 353, 722, 997, 1017, 1057, 1303, 1554
MflI RGATCY 1 cut(s) 712
MhlI GDGCHC 2 cut(s) 78, 796
MlsI TGGCCA 1 cut(s) 280
MluNI TGGCCA 1 cut(s) 280
MlyI GAGTC 3 cut(s) 140, 1228, 1337
MmeI TCCRAC 1 cut(s) 1194
Mox20I TGGCCA 1 cut(s) 280
Mph1103I ATGCAT 1 cut(s) 817
MscI TGGCCA 1 cut(s) 280
MseI TTAA 9 cut(s) 177, 189, 227, 270, 806, 968, 1055, 1095, 1455
MslI CAYNNNNRTG 1 cut(s) 81
Msp20I TGGCCA 1 cut(s) 280
MspA1I CMGCKG 1 cut(s) 686
MwoI GCNNNNNNNGC 6 cut(s) 503, 554, 588, 1121, 1133, 1398
NdeII GATC 5 cut(s) 103, 183, 712, 1159, 1527
NlaIII CATG 9 cut(s) 26, 60, 86, 319, 819, 949, 1004, 1252, 1501
NlaIV GGNNCC 2 cut(s) 951, 1422
NmuCI GTSAC 4 cut(s) 499, 1192, 1203, 1535
NsiI ATGCAT 1 cut(s) 817
NspI RCATGY 2 cut(s) 86, 819
NspV TTCGAA 1 cut(s) 669
PceI AGGCCT 1 cut(s) 410
PciSI GCTCTTC 2 cut(s) 1030, 1286
PfeI GAWTC 1 cut(s) 1261
PkrI GCNGC 8 cut(s) 172, 358, 496, 547, 550, 581, 1126, 1138
PleI GAGTC 3 cut(s) 140, 1227, 1336
PpsI GAGTC 3 cut(s) 140, 1227, 1336
PpuMI RGGWCCY 1 cut(s) 299
PsiI TTATAA 1 cut(s) 1304
Psp124BI GAGCTC 1 cut(s) 796
Psp5II RGGWCCY 1 cut(s) 299
PspN4I GGNNCC 2 cut(s) 951, 1422
PspPI GGNCC 2 cut(s) 299, 949
PspPPI RGGWCCY 1 cut(s) 299
PstI CTGCAG 2 cut(s) 547, 1141
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 1 cut(s) 712
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 1 cut(s) 628
RsaNI GTAC 1 cut(s) 627
RseI CAYNNNNRTG 1 cut(s) 81
SacI GAGCTC 1 cut(s) 796
SapI GCTCTTC 2 cut(s) 1030, 1286
SaqAI TTAA 9 cut(s) 177, 189, 227, 270, 806, 968, 1055, 1095, 1455
SatI GCNGC 8 cut(s) 171, 357, 495, 546, 549, 580, 1125, 1137
Sau3AI GATC 5 cut(s) 103, 183, 712, 1159, 1527
Sau96I GGNCC 2 cut(s) 299, 949
SchI GAGTC 3 cut(s) 140, 1228, 1337
SduI GDGCHC 2 cut(s) 78, 796
SfaNI GCATC 7 cut(s) 205, 238, 381, 481, 510, 964, 1453
SfcI CTRYAG 3 cut(s) 543, 681, 1137
SfuI TTCGAA 1 cut(s) 669
SinI GGWCC 2 cut(s) 299, 949
SmiMI CAYNNNNRTG 1 cut(s) 81
SmlI CTYRAG 1 cut(s) 1238
SmoI CTYRAG 1 cut(s) 1238
SseBI AGGCCT 1 cut(s) 410
SsiI CCGC 7 cut(s) 6, 394, 495, 579, 621, 1016, 1127
SspI AATATT 1 cut(s) 1459
SspMI CTAG 6 cut(s) 632, 770, 900, 1029, 1275, 1585
SstI GAGCTC 1 cut(s) 796
StuI AGGCCT 1 cut(s) 410
StyI CCWWGG 1 cut(s) 700
TaaI ACNGT 2 cut(s) 448, 1535
TaiI ACGT 1 cut(s) 519
TaqI TCGA 3 cut(s) 213, 669, 1581
TaqII GACCGA 1 cut(s) 1321
TauI GCSGC 2 cut(s) 497, 582
TfiI GAWTC 1 cut(s) 1261
Tru1I TTAA 9 cut(s) 177, 189, 227, 270, 806, 968, 1055, 1095, 1455
Tru9I TTAA 9 cut(s) 177, 189, 227, 270, 806, 968, 1055, 1095, 1455
TscAI CASTG 4 cut(s) 72, 508, 784, 1540
TseFI GTSAC 4 cut(s) 499, 1192, 1203, 1535
TseI GCWGC 6 cut(s) 170, 356, 545, 548, 1124, 1136
Tsp45I GTSAC 4 cut(s) 499, 1192, 1203, 1535
TspDTI ATGAA 5 cut(s) 45, 831, 998, 1265, 1304
TspRI CASTG 4 cut(s) 72, 508, 784, 1540
VpaK11BI GGWCC 2 cut(s) 299, 949
XapI RAATTY 3 cut(s) 749, 1032, 1546
XbaI TCTAGA 2 cut(s) 769, 1028
XceI RCATGY 2 cut(s) 86, 819
XspI CTAG 6 cut(s) 632, 770, 900, 1029, 1275, 1585
Zsp2I ATGCAT 1 cut(s) 817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.