Rw6G002200
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
3528509 .. 3531468
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G002200.1

Sequence Viewer

Length: 1977 bp
ATGGCATTGGTGGCTGAGAAAGCCAAGGGTGAGGGTCCAGCAATTGGTATCGACCTCGGAACAACATATTCATGTGTTGGTGTTTGGCAACATGATCGGGTTGAGATCATAGCCAATGACCAAGGCAACAGAACAACTCCGTCTTATGTTGCTTTCACTGACACTCGGCGCTTGATAGGTGATGCTGCCAAGAACCAGGCCGTCATGAACCCCATTAATACTGTTTTTGATGCAAAGCGTTTGATTGGTAGGAGATTTAGTGATTCATGTGTTAGAAGTGACATGAAGTTATGGCCTTTCAAGGTGATTTCTGGCGATAATAACAAACCGATGATTGTGGTCAAGTATAAGAATGAAACAAAACAATTAGCTCCGGAAGAGATATCATCAATGGTTCTCTATAAGATGCGTGAAATAGCAGAGGCCTATCTTGGATCGGTAGTAAAGAATGCAGTTGTAACTGTCCCAGCATATTTTAATGACTCTCAACGACTGGCCACAAAGGACGCTGGTTTAATTGCCGGAATGAACGTTATGCGTATCATCAATGAGCCAACAGCTGCGGCAATTGCTTATGGTCTTGACAAAAAAGTCAGTAGCACTGGTGGGAAGAATGTTCTCATATTCGATCTTGGTGGTGGTACCTTTGATGTCTCCATTCTTAAAATTGAAGATGAGATTTTTGAAGTGAAAGCTACGACTGGAGATACTCATCTTGGAGGTGAAGATTTTGACAATAGAATGGTGAACCATTTTGTACAAGAGTTCGAGAAGAAACACAAGAAGGACATTAGCAAAAACCCTAAAGCATTGAGGAGATTGAGAACATCTTGTGAGAGAGCGAAAAGGACTCTTTCTTCAACTACTGAAACCACTATTGAAATTGATTCTATATTTGAGGGTAAAGACTTTTTCTCCAAAATAACGAGAGCAAAATTTGAGGAGATCAATATGGATCTTTTTTTAAAATGTATGGAGTCTGTGGAGAATTGTATGAGGGATGCTAAAATAGACAGTAGCATCATTCATGATATTGTTCTTGTCGGTGGATCTACTAGAATTCCCAAGCTACAACAGCTATTGCAGGATTTTTTTAATGGTAAGGAGCTTTGCAAAAATATCAATCCAGATGAAGCAGTTGCATATGGCGCTGCCGTACAGGCTGCAGTTTTGAGCGGTGGCGTTGAGAAGGTTCAGGATTTACTCTTGCTGGATGTGACTCCACTTTCCCTTGGTGTGTGGCGTTATACAGGGAAAACAACTGTTATGATCCCAAGAAACACTACTGTTCCCACCAAGAAAGAAAAAGTTTTCACAACCATCATGCAAAACCAATATGGTATAATTATAGATGTTGTTGAGGGTGAAAGAATAATGGCCCGAGATAACAAATTCTTGGGTGGACTGGTACTCTCCGGCTTACCTCCTAGTCCAAAAGGTGTACCTTCGATCAGTGTTTGCTTCGAGATAGATGCGAATGGAATTTTGGTTATCTCTGCAGAGGAGATATTATTAACAGGAAGGAAGAAAAAGATCACAATCAATGATTACAAAAATAGGTTACATAGTTGGGAAATAGAGAAGATGGTAAAGGAGGCGGAGAAGTACAAGGCAGAGGATGAGGAGAATAAAAAGAAAGAAGAGGCTAAGGTTTTATTTGAATTATATGCATATGGCTTGAGGGATAGCGTTAATGATCTTGCCCTTAATGAGGCAAACAAGAAGACAATTGTTGATGCAGTTAAAAAGGCTTTGCTGTGGCTTAATGCGAACCAACTTGTGGAATGTAGTAAATACGAGGATGAAAGGGCAAAGCTTGAGAGTCTCTGCAATCCCATTATTGCAAAAGCCAAGATGCGTCAGAATGCTGGTAGCAAAAGTCAAGCTTATAGTATTTTGCAATGGGGGATGGGCGTAGGGAGAGGGGGCGCGAGGGGAACTAACCCTTCTCATATTTTTATCTTAATAGTTGACTAA
Functional Annotation

Protein Analysis

658

Amino Acids

73.06

Weight (kDa)

8.55

Isoelectric Point (pI)

37.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 14 - 616 8.7e-231 Hsp70 protein
MreB_Mbl PF06723 131 - 385 9.5e-14 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 590
Acc65I GGTACC 1 cut(s) 641
AccB1I GGYRCC 1 cut(s) 641
AccB7I CCANNNNNTGG 2 cut(s) 44, 1780
AccBSI CCGCTC 1 cut(s) 1176
AccII CGCG 1 cut(s) 1931
AccIII TCCGGA 1 cut(s) 373
AciI CCGC 3 cut(s) 563, 1176, 1598
AclI AACGTT 1 cut(s) 531
AclWI GGATC 4 cut(s) 442, 963, 1057, 1264
AcoI YGGCCR 1 cut(s) 495
AcsI RAATTY 4 cut(s) 935, 1059, 1391, 1482
AfaI GTAC 6 cut(s) 643, 759, 1158, 1410, 1443, 1607
AfiI CCNNNNNNNGG 3 cut(s) 44, 1711, 1780
AgsI TTSAA 6 cut(s) 301, 671, 686, 861, 881, 1661
AjnI CCWGG 1 cut(s) 195
AjuI GAANNNNNNNTTGG 2 cut(s) 1469, 1501
AluBI AGCT 8 cut(s) 371, 560, 695, 1069, 1078, 1108, 1816, 1886
AluI AGCT 8 cut(s) 371, 560, 695, 1069, 1078, 1108, 1816, 1886
Alw26I GTCTC 2 cut(s) 658, 1829
AlwI GGATC 4 cut(s) 442, 963, 1057, 1264
Ama87I CYCGRG 1 cut(s) 1380
Aor13HI TCCGGA 1 cut(s) 373
AoxI GGCC 5 cut(s) 198, 293, 423, 495, 1377
ApeKI GCWGC 4 cut(s) 185, 560, 1151, 1163
ApoI RAATTY 4 cut(s) 935, 1059, 1391, 1482
AseI ATTAAT 1 cut(s) 216
Asp718I GGTACC 1 cut(s) 641
AspLEI GCGC 3 cut(s) 171, 1151, 1931
AspS9I GGNCC 2 cut(s) 35, 1378
AsuHPI GGTGA 6 cut(s) 41, 191, 316, 734, 757, 1376
AvaI CYCGRG 1 cut(s) 1380
AvaII GGWCC 1 cut(s) 35
BalI TGGCCA 1 cut(s) 497
BanI GGYRCC 1 cut(s) 641
BbsI GAAGAC 1 cut(s) 1730
BbvI GCAGC 4 cut(s) 172, 547, 1138, 1150
BccI CCATC 3 cut(s) 1328, 1579, 1903
BceAI ACGGC 2 cut(s) 185, 1139
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 1454, 1488
BciT130I CCWGG 1 cut(s) 197
BcoDI GTCTC 2 cut(s) 658, 1829
BfaI CTAG 2 cut(s) 1056, 1428
BfmI CTRYAG 2 cut(s) 1164, 1497
BfoI RGCGCY 2 cut(s) 172, 1152
BglI GCCNNNNNGGC 1 cut(s) 1160
BisI GCNGC 5 cut(s) 186, 561, 564, 1152, 1164
BlsI GCNGC 5 cut(s) 187, 562, 565, 1153, 1165
Bme1390I CCNGG 1 cut(s) 197
Bme18I GGWCC 1 cut(s) 35
BmeT110I CYCGRG 1 cut(s) 1380
BmgT120I GGNCC 2 cut(s) 35, 1378
BmiI GGNNCC 2 cut(s) 36, 643
BmrFI CCNGG 1 cut(s) 197
BmsI GCATC 8 cut(s) 172, 220, 396, 991, 1029, 1462, 1726, 1845
BpiI GAAGAC 1 cut(s) 1730
BpmI CTGGAG 1 cut(s) 723
Bpu10I CCTNAGC 1 cut(s) 1647
BpuEI CTTGAG 2 cut(s) 1699, 1838
BsaBI GATNNNNATC 2 cut(s) 711, 1538
BsaJI CCNNGG 4 cut(s) 24, 55, 121, 1231
BsaWI WCCGGW 1 cut(s) 373
BsaXI ACNNNNNCTCC 4 cut(s) 244, 274, 899, 929
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 1711, 1780
Bse1I ACTGG 4 cut(s) 498, 607, 706, 1410
Bse3DI GCAATG 1 cut(s) 1907
Bse8I GATNNNNATC 2 cut(s) 711, 1538
BseAI TCCGGA 1 cut(s) 373
BseBI CCWGG 1 cut(s) 197
BseDI CCNNGG 4 cut(s) 24, 55, 121, 1231
BseGI GGATG 5 cut(s) 1006, 1219, 1624, 1807, 1914
BseJI GATNNNNATC 2 cut(s) 711, 1538
BseLI CCNNNNNNNGG 3 cut(s) 44, 1711, 1780
BseMI GCAATG 1 cut(s) 1907
BseMII CTCAG 1 cut(s) 6
BseNI ACTGG 4 cut(s) 498, 607, 706, 1410
BseRI GAGGAG 4 cut(s) 829, 956, 1517, 1637
BseXI GCAGC 4 cut(s) 172, 547, 1138, 1150
BseYI CCCAGC 1 cut(s) 466
Bsh1236I CGCG 1 cut(s) 1931
BshFI GGCC 5 cut(s) 200, 295, 425, 497, 1379
BshNI GGYRCC 1 cut(s) 641
BsiHKCI CYCGRG 1 cut(s) 1380
BsiSI CCGG 3 cut(s) 374, 522, 1416
BslFI GGGAC 1 cut(s) 449
BslI CCNNNNNNNGG 3 cut(s) 44, 1711, 1780
BsmAI GTCTC 2 cut(s) 658, 1829
BsmFI GGGAC 1 cut(s) 449
BsmI GAATGC 2 cut(s) 454, 1870
BsnI GGCC 5 cut(s) 200, 295, 425, 497, 1379
BsoBI CYCGRG 1 cut(s) 1380
Bsp13I TCCGGA 1 cut(s) 373
Bsp1407I TGTACA 1 cut(s) 757
BspACI CCGC 3 cut(s) 563, 1176, 1598
BspANI GGCC 5 cut(s) 200, 295, 425, 497, 1379
BspCNI CTCAG 1 cut(s) 7
BspEI TCCGGA 1 cut(s) 373
BspFNI CGCG 1 cut(s) 1931
BspHI TCATGA 2 cut(s) 204, 1027
BspLI GGNNCC 2 cut(s) 36, 643
BspMAI CTGCAG 2 cut(s) 1168, 1501
BspPI GGATC 4 cut(s) 442, 963, 1057, 1264
BspT107I GGYRCC 1 cut(s) 641
BsrBI CCGCTC 1 cut(s) 1176
BsrDI GCAATG 1 cut(s) 1907
BsrGI TGTACA 1 cut(s) 757
BsrI ACTGG 4 cut(s) 498, 607, 706, 1410
BssECI CCNNGG 4 cut(s) 24, 55, 121, 1231
BssT1I CCWWGG 3 cut(s) 24, 121, 1231
Bst2UI CCWGG 1 cut(s) 197
Bst4CI ACNGT 5 cut(s) 223, 463, 1016, 1264, 1288
Bst6I CTCTTC 2 cut(s) 372, 1635
BstAUI TGTACA 1 cut(s) 757
BstDEI CTNAG 2 cut(s) 15, 1647
BstENI CCTNNNNNAGG 1 cut(s) 1709
BstF5I GGATG 5 cut(s) 1006, 1219, 1624, 1807, 1914
BstFNI CGCG 1 cut(s) 1931
BstH2I RGCGCY 2 cut(s) 172, 1152
BstHHI GCGC 3 cut(s) 171, 1151, 1931
BstMAI GTCTC 2 cut(s) 658, 1829
BstMWI GCNNNNNNNGC 6 cut(s) 11, 20, 569, 1075, 1148, 1160
BstNI CCWGG 1 cut(s) 197
BstSCI CCNGG 1 cut(s) 195
BstSFI CTRYAG 2 cut(s) 1164, 1497
BstUI CGCG 1 cut(s) 1931
BstV1I GCAGC 4 cut(s) 172, 547, 1138, 1150
BstV2I GAAGAC 1 cut(s) 1730
BstX2I RGATCY 2 cut(s) 955, 1049
BstYI RGATCY 2 cut(s) 955, 1049
BsuRI GGCC 5 cut(s) 200, 295, 425, 497, 1379
BtsCI GGATG 5 cut(s) 1006, 1219, 1624, 1807, 1914
BtsIMutI CAGTG 3 cut(s) 156, 600, 1459
CciI TCATGA 2 cut(s) 204, 1027
CfoI GCGC 3 cut(s) 171, 1151, 1931
Cfr13I GGNCC 2 cut(s) 35, 1378
CseI GACGC 2 cut(s) 515, 1847
Csp6I GTAC 6 cut(s) 642, 758, 1157, 1409, 1442, 1606
CviAII CATG 7 cut(s) 72, 92, 205, 267, 283, 1028, 1324
CviQI GTAC 6 cut(s) 642, 758, 1157, 1409, 1442, 1606
DdeI CTNAG 2 cut(s) 15, 1647
DraI TTTAAA 1 cut(s) 966
DrdI GACNNNNNNGTC 1 cut(s) 590
DseDI GACNNNNNNGTC 1 cut(s) 590
EaeI YGGCCR 1 cut(s) 495
Eam1104I CTCTTC 2 cut(s) 372, 1635
EarI CTCTTC 2 cut(s) 372, 1635
EciI GGCGGA 1 cut(s) 1613
Eco130I CCWWGG 3 cut(s) 24, 121, 1231
Eco147I AGGCCT 1 cut(s) 425
Eco32I GATATC 1 cut(s) 384
Eco47I GGWCC 1 cut(s) 35
Eco88I CYCGRG 1 cut(s) 1380
EcoNI CCTNNNNNAGG 1 cut(s) 1709
EcoRI GAATTC 1 cut(s) 1059
EcoRII CCWGG 1 cut(s) 195
EcoRV GATATC 1 cut(s) 384
EcoT14I CCWWGG 3 cut(s) 24, 121, 1231
EcoT22I ATGCAT 1 cut(s) 1672
ErhI CCWWGG 3 cut(s) 24, 121, 1231
FaeI CATG 7 cut(s) 75, 95, 208, 270, 286, 1031, 1327
FalI AAGNNNNNCTT 2 cut(s) 1870, 1902
FaqI GGGAC 1 cut(s) 449
FatI CATG 7 cut(s) 71, 91, 204, 266, 282, 1027, 1323
FauNDI CATATG 2 cut(s) 1144, 1672
Fnu4HI GCNGC 5 cut(s) 186, 561, 564, 1152, 1164
FokI GGATG 5 cut(s) 1013, 1226, 1631, 1814, 1921
Fsp4HI GCNGC 5 cut(s) 186, 561, 564, 1152, 1164
FspBI CTAG 2 cut(s) 1056, 1428
GlaI GCGC 3 cut(s) 170, 1150, 1930
GluI GCNGC 5 cut(s) 186, 561, 564, 1152, 1164
GsaI CCCAGC 1 cut(s) 470
GsuI CTGGAG 1 cut(s) 723
HaeII RGCGCY 2 cut(s) 172, 1152
HaeIII GGCC 5 cut(s) 200, 295, 425, 497, 1379
HapII CCGG 3 cut(s) 374, 522, 1416
HgaI GACGC 2 cut(s) 515, 1847
HhaI GCGC 3 cut(s) 171, 1151, 1931
Hin1II CATG 7 cut(s) 75, 95, 208, 270, 286, 1031, 1327
Hin6I GCGC 3 cut(s) 169, 1149, 1929
HinP1I GCGC 3 cut(s) 169, 1149, 1929
HincII GTYRAC 1 cut(s) 1972
HindII GTYRAC 1 cut(s) 1972
HindIII AAGCTT 2 cut(s) 1814, 1884
HinfI GANTC 7 cut(s) 263, 482, 850, 887, 977, 1219, 1822
HpaII CCGG 3 cut(s) 374, 522, 1416
HphI GGTGA 6 cut(s) 41, 191, 316, 734, 757, 1376
Hpy166II GTNNAC 4 cut(s) 748, 1403, 1442, 1972
Hpy188I TCNGA 2 cut(s) 59, 1863
Hpy188III TCNNGA 8 cut(s) 205, 374, 581, 769, 1028, 1127, 1196, 1465
Hpy8I GTNNAC 4 cut(s) 748, 1403, 1442, 1972
HpyAV CCTTC 5 cut(s) 778, 1183, 1455, 1515, 1956
HpyCH4III ACNGT 5 cut(s) 223, 463, 1016, 1264, 1288
HpyCH4IV ACGT 1 cut(s) 531
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 20, 569, 1075, 1148, 1160
HpyF3I CTNAG 2 cut(s) 15, 1647
HpySE526I ACGT 1 cut(s) 531
Hsp92II CATG 7 cut(s) 75, 95, 208, 270, 286, 1031, 1327
HspAI GCGC 3 cut(s) 169, 1149, 1929
Kpn2I TCCGGA 1 cut(s) 373
KpnI GGTACC 1 cut(s) 645
LmnI GCTCC 2 cut(s) 376, 1105
Lsp1109I GCAGC 4 cut(s) 172, 547, 1138, 1150
LweI GCATC 8 cut(s) 172, 220, 396, 991, 1029, 1462, 1726, 1845
MaeI CTAG 2 cut(s) 1056, 1428
MaeII ACGT 1 cut(s) 531
MaeIII GTNAC 4 cut(s) 278, 457, 1216, 1560
MbiI CCGCTC 1 cut(s) 1176
MfeI CAATTG 3 cut(s) 42, 567, 1728
MflI RGATCY 2 cut(s) 955, 1049
MlsI TGGCCA 1 cut(s) 497
MluNI TGGCCA 1 cut(s) 497
MlyI GAGTC 5 cut(s) 476, 844, 986, 1213, 1831
Mox20I TGGCCA 1 cut(s) 497
Mph1103I ATGCAT 1 cut(s) 1672
MroI TCCGGA 1 cut(s) 373
MscI TGGCCA 1 cut(s) 497
MslI CAYNNNNRTG 1 cut(s) 70
Msp20I TGGCCA 1 cut(s) 497
MspA1I CMGCKG 1 cut(s) 560
MspI CCGG 3 cut(s) 374, 522, 1416
MspR9I CCNGG 1 cut(s) 197
MunI CAATTG 3 cut(s) 42, 567, 1728
Mva1269I GAATGC 2 cut(s) 454, 1870
MvaI CCWGG 1 cut(s) 197
MvnI CGCG 1 cut(s) 1931
MwoI GCNNNNNNNGC 6 cut(s) 11, 20, 569, 1075, 1148, 1160
NdeI CATATG 2 cut(s) 1144, 1672
NlaIII CATG 7 cut(s) 75, 95, 208, 270, 286, 1031, 1327
NlaIV GGNNCC 2 cut(s) 36, 643
NmeAIII GCCGAG 1 cut(s) 145
NmuCI GTSAC 2 cut(s) 278, 1216
NsiI ATGCAT 1 cut(s) 1672
PagI TCATGA 2 cut(s) 204, 1027
PceI AGGCCT 1 cut(s) 425
PctI GAATGC 2 cut(s) 454, 1870
PfeI GAWTC 2 cut(s) 263, 887
PflMI CCANNNNNTGG 2 cut(s) 44, 1780
PkrI GCNGC 5 cut(s) 187, 562, 565, 1153, 1165
PleI GAGTC 5 cut(s) 476, 844, 985, 1213, 1830
PpsI GAGTC 5 cut(s) 476, 844, 985, 1213, 1830
PshBI ATTAAT 1 cut(s) 216
Psp1406I AACGTT 1 cut(s) 531
Psp6I CCWGG 1 cut(s) 195
PspFI CCCAGC 1 cut(s) 466
PspGI CCWGG 1 cut(s) 195
PspN4I GGNNCC 2 cut(s) 36, 643
PspPI GGNCC 2 cut(s) 35, 1378
PstI CTGCAG 2 cut(s) 1168, 1501
PsuI RGATCY 2 cut(s) 955, 1049
PvuII CAGCTG 1 cut(s) 560
RsaI GTAC 6 cut(s) 643, 759, 1158, 1410, 1443, 1607
RsaNI GTAC 6 cut(s) 642, 758, 1157, 1409, 1442, 1606
RseI CAYNNNNRTG 1 cut(s) 70
SatI GCNGC 5 cut(s) 186, 561, 564, 1152, 1164
Sau96I GGNCC 2 cut(s) 35, 1378
SchI GAGTC 5 cut(s) 476, 844, 986, 1213, 1831
ScrFI CCNGG 1 cut(s) 197
SfaNI GCATC 8 cut(s) 172, 220, 396, 991, 1029, 1462, 1726, 1845
SfcI CTRYAG 2 cut(s) 1164, 1497
SinI GGWCC 1 cut(s) 35
SmiMI CAYNNNNRTG 1 cut(s) 70
SmlI CTYRAG 2 cut(s) 1678, 1817
SmoI CTYRAG 2 cut(s) 1678, 1817
SseBI AGGCCT 1 cut(s) 425
SsiI CCGC 3 cut(s) 563, 1176, 1598
SspMI CTAG 2 cut(s) 1056, 1428
StuI AGGCCT 1 cut(s) 425
StyD4I CCNGG 1 cut(s) 195
StyI CCWWGG 3 cut(s) 24, 121, 1231
TaaI ACNGT 5 cut(s) 223, 463, 1016, 1264, 1288
TaiI ACGT 1 cut(s) 534
TaqI TCGA 5 cut(s) 51, 627, 768, 1448, 1464
TatI WGTACW 2 cut(s) 757, 1605
TauI GCSGC 1 cut(s) 566
TfiI GAWTC 2 cut(s) 263, 887
TscAI CASTG 3 cut(s) 163, 607, 1459
TseFI GTSAC 2 cut(s) 278, 1216
TseI GCWGC 4 cut(s) 185, 560, 1151, 1163
Tsp45I GTSAC 2 cut(s) 278, 1216
TspDTI ATGAA 9 cut(s) 60, 221, 255, 299, 369, 542, 1016, 1146, 1818
TspGWI ACGGA 1 cut(s) 129
TspRI CASTG 3 cut(s) 163, 607, 1459
Van91I CCANNNNNTGG 2 cut(s) 44, 1780
VpaK11BI GGWCC 1 cut(s) 35
VspI ATTAAT 1 cut(s) 216
XagI CCTNNNNNAGG 1 cut(s) 1709
XapI RAATTY 4 cut(s) 935, 1059, 1391, 1482
XspI CTAG 2 cut(s) 1056, 1428
Zsp2I ATGCAT 1 cut(s) 1672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.