Rw3G012980
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
12752935 .. 12756866
3932 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G012980.1

Sequence Viewer

Length: 1539 bp
ATGGCGGGACAAGCAATTGGGATCGATTTGGGGACGACTTATTCGTGCGTTGGAGTTTGGCAGAACGATCATGTAGAAATCATAGTGAATGATCAGGGCAACAGGACCACTCCTTCTTATGTTGCCTTCAATGAGACTGAGCGTTTGGTTGGTGATGCAGCTTTCAACCAGGTCATCAAGAACCCTACCAATTCCATATTTGATGCAAAGCGGTTAATAGGCAGGAGGTTCAGTGACATAACTGTTCAAAATGACATGAAGTTCTGGCCATTCAAGGTCATTGAAGGCCGTGATGACAAACCCATGATTGTGGTTACACATGAGGGCCAAGAGAGACAGTTTGCTGCTGAGGAGATCTCCTCCATGGTTTTGGCAAAGATGCGGGAGATTTCTGAGGAGTTCCTTGGCTCAACAGTGAAAAATGCTGTTATCACAGTGCCTGCTTACTTCAGTGACTCACAACGCCAGGCTACAAGAAATGCAGGTGAATTTGCAGGTCTGAAGGTGATGCGTATTATCAATGAACCAACAGCTGCAGCAATTGCTTATGGCCTTGAAAAAAAGGCTGGTTGGTATAGCAAAAGAAATGTGATGATATTTGATTTGGGAGGTGGAACTTTAGATGTATCACTGCTTACAATAAGCGCTGGTGTTTTTGAAGTGAAAGCCACGGCTGGAGACACTCACCTTGGTGGTGAAGACTTTGATAACCGAATGGTGAATTACTGTGTTGAGGAATTTAAGAGGAAGCATGACTTGGATGTGAGTGGAAACTCGAGAGCTCTTAGGAGGCTAAGAAATGCTTGTGAGAAGGCCAAGAGGAGACTTTCATTTACATCTTCTATTGAGGTTCAAATTGACTGTTTGGATAAGGGCATTGATTTGTATATAACTATTTCCCGTGCCAAATTTGAACAACTGAACATGGATTTCTTCAACAAGTGTATGGAGCCCGTGGAGAAGTGTATAAGAGATGCTAACATGGACATAAGCCAGATTGATGATGTTGTTCTCGCCGGTGGATCTTCTAGAATTCCCAAAGTGCAGCAATTATTGCAGGATGTCTTCAAGGGAAAAAAGCTATGCAAGAGCATTAATCCAGATGAGGCAATAGCATATGGTGCTGCTGTTCAAGCTGCAATCCTGAGTGGGAATGGAAATTGGAAGCTTCATGACTTCACTCTCTTGGATGTCACACCTATGTCACTGGGAGTGGATACAGAATATACAAATGTCATGCATTTTGTTATTCAAAGAAACACCAGAATTCCGGTCAAGAAGAATACAACACTGTATACCCTTTATGACAACCAAAGTGCCGTTGCCTTTCCAGTTTTTGAGGGTGAGAGTAAAACCACTTTGAACAATAACCTTTTGGGTAAATTTAGCCTCGTGAACATTCCTCCGGCTCCTAAGGGTTATCCATTCGACGTTTGCTTTGAAATTGATGAAAATGGTATCCTAAGTGTCTCTGCTGAGGACAAGTCCACTGGCCAGAAAAAAGGGATTACAATCATGAGTGACAGGAAGAACTTCTAA
Functional Annotation

Protein Analysis

512

Amino Acids

56.95

Weight (kDa)

6.01

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 5 - 508 9.8e-208 Hsp70 protein
MreB_Mbl PF06723 138 - 376 2.9e-16 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 473
Acc36I ACCTGC 2 cut(s) 473, 485
AccI GTMKAC 1 cut(s) 1295
AciI CCGC 3 cut(s) 5, 211, 382
AclWI GGATC 2 cut(s) 29, 1030
AcoI YGGCCR 2 cut(s) 266, 1492
AcsI RAATTY 6 cut(s) 488, 737, 908, 1032, 1266, 1382
AcuI CTGAAG 2 cut(s) 433, 521
AfeI AGCGCT 1 cut(s) 646
AjnI CCWGG 2 cut(s) 168, 465
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
AleI CACNNNNGTG 1 cut(s) 690
AluBI AGCT 6 cut(s) 161, 533, 782, 1081, 1136, 1168
AluI AGCT 6 cut(s) 161, 533, 782, 1081, 1136, 1168
Alw21I GWGCWC 1 cut(s) 784
Alw26I GTCTC 5 cut(s) 128, 328, 672, 817, 1474
AlwI GGATC 2 cut(s) 29, 1030
AlwNI CAGNNNCTG 1 cut(s) 440
Ama87I CYCGRG 1 cut(s) 775
Aor51HI AGCGCT 1 cut(s) 646
AoxI GGCC 6 cut(s) 266, 286, 325, 550, 813, 1492
ApeKI GCWGC 7 cut(s) 158, 344, 533, 536, 1045, 1124, 1136
ApoI RAATTY 6 cut(s) 488, 737, 908, 1032, 1266, 1382
ArsI GACNNNNNNTTYG 6 cut(s) 25, 57, 127, 159, 1421, 1453
AseI ATTAAT 1 cut(s) 1095
Asp700I GAANNNNTTC 1 cut(s) 1532
AspLEI GCGC 1 cut(s) 647
AspS9I GGNCC 2 cut(s) 105, 325
AsuHPI GGTGA 7 cut(s) 164, 497, 517, 677, 707, 730, 1355
AvaI CYCGRG 1 cut(s) 775
AvaII GGWCC 1 cut(s) 105
AxyI CCTNAGG 1 cut(s) 1413
BalI TGGCCA 2 cut(s) 268, 1494
BanII GRGCYC 2 cut(s) 784, 954
BauI CACGAG 1 cut(s) 1391
BbsI GAAGAC 2 cut(s) 705, 1057
Bbv12I GWGCWC 1 cut(s) 784
BbvCI CCTCAGC 2 cut(s) 348, 1476
BbvI GCAGC 7 cut(s) 170, 331, 520, 548, 1057, 1111, 1123
BceAI ACGGC 3 cut(s) 273, 687, 1304
BciT130I CCWGG 2 cut(s) 170, 467
BciVI GTATCC 2 cut(s) 1210, 1469
BclI TGATCA 1 cut(s) 91
BcoDI GTCTC 5 cut(s) 128, 328, 672, 817, 1474
BfaI CTAG 1 cut(s) 1029
BfmI CTRYAG 1 cut(s) 534
BfoI RGCGCY 1 cut(s) 648
BfuAI ACCTGC 2 cut(s) 473, 485
BfuI GTATCC 2 cut(s) 1210, 1469
BglII AGATCT 1 cut(s) 354
BisI GCNGC 7 cut(s) 159, 345, 534, 537, 1046, 1125, 1137
BlsI GCNGC 7 cut(s) 160, 346, 535, 538, 1047, 1126, 1138
Bme1390I CCNGG 2 cut(s) 170, 467
Bme18I GGWCC 1 cut(s) 105
BmeT110I CYCGRG 1 cut(s) 775
BmgT120I GGNCC 2 cut(s) 105, 325
BmiI GGNNCC 2 cut(s) 951, 1410
BmrFI CCNGG 2 cut(s) 170, 467
BmrI ACTGGG 1 cut(s) 1217
BmsI GCATC 5 cut(s) 145, 193, 369, 498, 964
BmuI ACTGGG 1 cut(s) 1217
BpiI GAAGAC 2 cut(s) 705, 1057
BplI GAGNNNNNCTC 4 cut(s) 341, 373, 344, 376
BpmI CTGGAG 1 cut(s) 696
Bpu10I CCTNAGC 2 cut(s) 348, 1476
Bsa29I ATCGAT 1 cut(s) 24
BsaBI GATNNNNATC 1 cut(s) 1511
BsaJI CCNNGG 5 cut(s) 363, 403, 669, 688, 954
BsaWI WCCGGW 1 cut(s) 1270
BsaXI ACNNNNNCTCC 2 cut(s) 217, 247
Bse118I RCCGGY 1 cut(s) 1016
Bse1I ACTGG 3 cut(s) 1212, 1331, 1495
Bse21I CCTNAGG 1 cut(s) 1413
Bse8I GATNNNNATC 1 cut(s) 1511
BseBI CCWGG 2 cut(s) 170, 467
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 5 cut(s) 363, 403, 669, 688, 954
BseGI GGATG 3 cut(s) 766, 1066, 1195
BseJI GATNNNNATC 1 cut(s) 1511
BseMII CTCAG 5 cut(s) 129, 339, 384, 1136, 1467
BseNI ACTGG 3 cut(s) 1212, 1331, 1495
BseRI GAGGAG 4 cut(s) 349, 365, 410, 835
BseXI GCAGC 7 cut(s) 170, 331, 520, 548, 1057, 1111, 1123
BsgI GTGCAG 1 cut(s) 1064
BshFI GGCC 6 cut(s) 268, 288, 327, 552, 815, 1494
BshVI ATCGAT 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 784
BsiHKCI CYCGRG 1 cut(s) 775
BsiSI CCGG 3 cut(s) 1017, 1271, 1406
BslFI GGGAC 2 cut(s) 21, 46
BsmAI GTCTC 5 cut(s) 128, 328, 672, 817, 1474
BsmFI GGGAC 2 cut(s) 21, 46
BsnI GGCC 6 cut(s) 268, 288, 327, 552, 815, 1494
BsoBI CYCGRG 1 cut(s) 775
Bsp1286I GDGCHC 2 cut(s) 784, 954
Bsp143I GATC 5 cut(s) 21, 67, 91, 354, 1022
Bsp19I CCATGG 1 cut(s) 363
BspACI CCGC 3 cut(s) 5, 211, 382
BspANI GGCC 6 cut(s) 268, 288, 327, 552, 815, 1494
BspCNI CTCAG 5 cut(s) 130, 340, 385, 1137, 1468
BspDI ATCGAT 1 cut(s) 24
BspHI TCATGA 2 cut(s) 1171, 1515
BspLI GGNNCC 2 cut(s) 951, 1410
BspMAI CTGCAG 1 cut(s) 538
BspMI ACCTGC 2 cut(s) 473, 485
BspPI GGATC 2 cut(s) 29, 1030
BsrFI RCCGGY 1 cut(s) 1016
BsrI ACTGG 3 cut(s) 1212, 1331, 1495
BssAI RCCGGY 1 cut(s) 1016
BssECI CCNNGG 5 cut(s) 363, 403, 669, 688, 954
BssMI GATC 5 cut(s) 21, 67, 91, 354, 1022
BssNAI GTATAC 1 cut(s) 1296
BssSI CACGAG 1 cut(s) 1391
BssT1I CCWWGG 3 cut(s) 363, 403, 688
Bst1107I GTATAC 1 cut(s) 1296
Bst2BI CACGAG 1 cut(s) 1391
Bst2UI CCWGG 2 cut(s) 170, 467
Bst4CI ACNGT 7 cut(s) 244, 339, 415, 436, 728, 863, 1293
BstAPI GCANNNNNTGC 3 cut(s) 542, 1054, 1121
BstC8I GCNNGC 1 cut(s) 441
BstDEI CTNAG 9 cut(s) 138, 348, 393, 785, 794, 1145, 1413, 1463, 1476
BstDSI CCRYGG 3 cut(s) 363, 669, 954
BstF5I GGATG 3 cut(s) 766, 1066, 1195
BstH2I RGCGCY 1 cut(s) 648
BstHHI GCGC 1 cut(s) 647
BstKTI GATC 5 cut(s) 24, 70, 94, 357, 1025
BstMAI GTCTC 5 cut(s) 128, 328, 672, 817, 1474
BstMBI GATC 5 cut(s) 21, 67, 91, 354, 1022
BstMWI GCNNNNNNNGC 5 cut(s) 11, 542, 1054, 1121, 1133
BstNI CCWGG 2 cut(s) 170, 467
BstSCI CCNGG 2 cut(s) 168, 465
BstSFI CTRYAG 1 cut(s) 534
BstV1I GCAGC 7 cut(s) 170, 331, 520, 548, 1057, 1111, 1123
BstV2I GAAGAC 2 cut(s) 705, 1057
BstX2I RGATCY 2 cut(s) 354, 1022
BstXI CCANNNNNNTGG 2 cut(s) 310, 370
BstYI RGATCY 2 cut(s) 354, 1022
BstZ17I GTATAC 1 cut(s) 1296
Bsu15I ATCGAT 1 cut(s) 24
Bsu36I CCTNAGG 1 cut(s) 1413
BsuI GTATCC 2 cut(s) 1210, 1469
BsuRI GGCC 6 cut(s) 268, 288, 327, 552, 815, 1494
BsuTUI ATCGAT 1 cut(s) 24
BtgI CCRYGG 3 cut(s) 363, 669, 954
BtsCI GGATG 3 cut(s) 766, 1066, 1195
BtsI GCAGTG 1 cut(s) 629
BtsIMutI CAGTG 8 cut(s) 238, 420, 441, 457, 629, 1205, 1289, 1488
BveI ACCTGC 2 cut(s) 473, 485
Cac8I GCNNGC 1 cut(s) 441
CaiI CAGNNNCTG 1 cut(s) 440
CciI TCATGA 2 cut(s) 1171, 1515
CfoI GCGC 1 cut(s) 647
Cfr10I RCCGGY 1 cut(s) 1016
Cfr13I GGNCC 2 cut(s) 105, 325
ClaI ATCGAT 1 cut(s) 24
CsiI ACCWGGT 1 cut(s) 168
DdeI CTNAG 9 cut(s) 138, 348, 393, 785, 794, 1145, 1413, 1463, 1476
DpnI GATC 5 cut(s) 23, 69, 93, 356, 1024
DpnII GATC 5 cut(s) 21, 67, 91, 354, 1022
EaeI YGGCCR 2 cut(s) 266, 1492
Ecl136II GAGCTC 1 cut(s) 782
Eco130I CCWWGG 3 cut(s) 363, 403, 688
Eco24I GRGCYC 2 cut(s) 784, 954
Eco47I GGWCC 1 cut(s) 105
Eco47III AGCGCT 1 cut(s) 646
Eco53kI GAGCTC 1 cut(s) 782
Eco57I CTGAAG 2 cut(s) 433, 521
Eco81I CCTNAGG 1 cut(s) 1413
Eco88I CYCGRG 1 cut(s) 775
EcoICRI GAGCTC 1 cut(s) 782
EcoRI GAATTC 2 cut(s) 1032, 1266
EcoRII CCWGG 2 cut(s) 168, 465
EcoT14I CCWWGG 3 cut(s) 363, 403, 688
EcoT22I ATGCAT 1 cut(s) 1242
EcoT38I GRGCYC 2 cut(s) 784, 954
ErhI CCWWGG 3 cut(s) 363, 403, 688
FalI AAGNNNNNCTT 4 cut(s) 740, 772, 787, 819
FaqI GGGAC 2 cut(s) 21, 46
FauI CCCGC 1 cut(s) 375
FauNDI CATATG 1 cut(s) 1117
FbaI TGATCA 1 cut(s) 91
FblI GTMKAC 1 cut(s) 1295
Fnu4HI GCNGC 7 cut(s) 159, 345, 534, 537, 1046, 1125, 1137
FokI GGATG 3 cut(s) 773, 1073, 1202
FriOI GRGCYC 2 cut(s) 784, 954
Fsp4HI GCNGC 7 cut(s) 159, 345, 534, 537, 1046, 1125, 1137
FspBI CTAG 1 cut(s) 1029
GlaI GCGC 1 cut(s) 646
GluI GCNGC 7 cut(s) 159, 345, 534, 537, 1046, 1125, 1137
GsuI CTGGAG 1 cut(s) 696
HaeII RGCGCY 1 cut(s) 648
HaeIII GGCC 6 cut(s) 268, 288, 327, 552, 815, 1494
HapII CCGG 3 cut(s) 1017, 1271, 1406
HhaI GCGC 1 cut(s) 647
Hin6I GCGC 1 cut(s) 645
HinP1I GCGC 1 cut(s) 645
HindIII AAGCTT 1 cut(s) 1166
HinfI GANTC 1 cut(s) 455
HpaII CCGG 3 cut(s) 1017, 1271, 1406
HphI GGTGA 7 cut(s) 164, 497, 517, 677, 707, 730, 1355
Hpy166II GTNNAC 3 cut(s) 1296, 1396, 1488
Hpy188I TCNGA 2 cut(s) 394, 501
Hpy188III TCNNGA 9 cut(s) 178, 777, 1029, 1100, 1144, 1172, 1276, 1393, 1516
Hpy8I GTNNAC 3 cut(s) 1296, 1396, 1488
Hpy99I CGWCG 1 cut(s) 1433
HpyAV CCTTC 5 cut(s) 123, 136, 278, 496, 805
HpyCH4III ACNGT 7 cut(s) 244, 339, 415, 436, 728, 863, 1293
HpyCH4IV ACGT 1 cut(s) 1431
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 542, 1054, 1121, 1133
HpyF3I CTNAG 9 cut(s) 138, 348, 393, 785, 794, 1145, 1413, 1463, 1476
HpySE526I ACGT 1 cut(s) 1431
HspAI GCGC 1 cut(s) 645
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 5 cut(s) 21, 67, 91, 354, 1022
LmnI GCTCC 2 cut(s) 949, 1414
Lsp1109I GCAGC 7 cut(s) 170, 331, 520, 548, 1057, 1111, 1123
LweI GCATC 5 cut(s) 145, 193, 369, 498, 964
MabI ACCWGGT 1 cut(s) 168
MaeI CTAG 1 cut(s) 1029
MaeII ACGT 1 cut(s) 1431
MaeIII GTNAC 6 cut(s) 233, 313, 452, 1192, 1203, 1520
MalI GATC 5 cut(s) 23, 69, 93, 356, 1024
MboI GATC 5 cut(s) 21, 67, 91, 354, 1022
MboII GAAGA 6 cut(s) 710, 831, 925, 1017, 1057, 1291
MfeI CAATTG 2 cut(s) 15, 540
MflI RGATCY 2 cut(s) 354, 1022
MhlI GDGCHC 2 cut(s) 784, 954
MlsI TGGCCA 2 cut(s) 268, 1494
MluNI TGGCCA 2 cut(s) 268, 1494
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 1 cut(s) 31
Mox20I TGGCCA 2 cut(s) 268, 1494
Mph1103I ATGCAT 1 cut(s) 1242
MroXI GAANNNNTTC 1 cut(s) 1532
MscI TGGCCA 2 cut(s) 268, 1494
MseI TTAA 3 cut(s) 215, 741, 1095
MslI CAYNNNNRTG 3 cut(s) 308, 690, 1199
Msp20I TGGCCA 2 cut(s) 268, 1494
MspA1I CMGCKG 1 cut(s) 533
MspI CCGG 3 cut(s) 1017, 1271, 1406
MspR9I CCNGG 2 cut(s) 170, 467
MunI CAATTG 2 cut(s) 15, 540
MvaI CCWGG 2 cut(s) 170, 467
MwoI GCNNNNNNNGC 5 cut(s) 11, 542, 1054, 1121, 1133
NcoI CCATGG 1 cut(s) 363
NdeI CATATG 1 cut(s) 1117
NdeII GATC 5 cut(s) 21, 67, 91, 354, 1022
NlaIV GGNNCC 2 cut(s) 951, 1410
NmuCI GTSAC 5 cut(s) 233, 452, 1192, 1203, 1520
NsiI ATGCAT 1 cut(s) 1242
OliI CACNNNNGTG 1 cut(s) 690
PaeR7I CTCGAG 1 cut(s) 775
PagI TCATGA 2 cut(s) 1171, 1515
PaqCI CACCTGC 1 cut(s) 473
PcsI WCGNNNNNNNCGW 1 cut(s) 41
PdmI GAANNNNTTC 1 cut(s) 1532
PkrI GCNGC 7 cut(s) 160, 346, 535, 538, 1047, 1126, 1138
PleI GAGTC 1 cut(s) 449
PpsI GAGTC 1 cut(s) 449
PshBI ATTAAT 1 cut(s) 1095
Psp124BI GAGCTC 1 cut(s) 784
Psp6I CCWGG 2 cut(s) 168, 465
PspGI CCWGG 2 cut(s) 168, 465
PspN4I GGNNCC 2 cut(s) 951, 1410
PspPI GGNCC 2 cut(s) 105, 325
PstI CTGCAG 1 cut(s) 538
PstNI CAGNNNCTG 1 cut(s) 440
PsuI RGATCY 2 cut(s) 354, 1022
PvuII CAGCTG 1 cut(s) 533
RseI CAYNNNNRTG 3 cut(s) 308, 690, 1199
SacI GAGCTC 1 cut(s) 784
SaqAI TTAA 3 cut(s) 215, 741, 1095
SatI GCNGC 7 cut(s) 159, 345, 534, 537, 1046, 1125, 1137
Sau3AI GATC 5 cut(s) 21, 67, 91, 354, 1022
Sau96I GGNCC 2 cut(s) 105, 325
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 2 cut(s) 170, 467
SduI GDGCHC 2 cut(s) 784, 954
SexAI ACCWGGT 1 cut(s) 168
SfaNI GCATC 5 cut(s) 145, 193, 369, 498, 964
SfcI CTRYAG 1 cut(s) 534
Sfr274I CTCGAG 1 cut(s) 775
SgrAI CRCCGGYG 1 cut(s) 1016
SinI GGWCC 1 cut(s) 105
SlaI CTCGAG 1 cut(s) 775
SmiMI CAYNNNNRTG 3 cut(s) 308, 690, 1199
SmlI CTYRAG 1 cut(s) 775
SmoI CTYRAG 1 cut(s) 775
SsiI CCGC 3 cut(s) 5, 211, 382
SspMI CTAG 1 cut(s) 1029
SstI GAGCTC 1 cut(s) 784
StyD4I CCNGG 2 cut(s) 168, 465
StyI CCWWGG 3 cut(s) 363, 403, 688
TaaI ACNGT 7 cut(s) 244, 339, 415, 436, 728, 863, 1293
TaiI ACGT 1 cut(s) 1434
TaqI TCGA 3 cut(s) 24, 776, 1428
Tru1I TTAA 3 cut(s) 215, 741, 1095
Tru9I TTAA 3 cut(s) 215, 741, 1095
TscAI CASTG 8 cut(s) 238, 420, 441, 457, 636, 1212, 1296, 1495
TseFI GTSAC 5 cut(s) 233, 452, 1192, 1203, 1520
TseI GCWGC 7 cut(s) 158, 344, 533, 536, 1045, 1124, 1136
Tsp45I GTSAC 5 cut(s) 233, 452, 1192, 1203, 1520
TspDTI ATGAA 5 cut(s) 272, 537, 819, 1160, 1464
TspRI CASTG 8 cut(s) 238, 420, 441, 457, 636, 1212, 1296, 1495
VpaK11BI GGWCC 1 cut(s) 105
VspI ATTAAT 1 cut(s) 1095
XapI RAATTY 6 cut(s) 488, 737, 908, 1032, 1266, 1382
XbaI TCTAGA 1 cut(s) 1028
XhoI CTCGAG 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 1295
XmnI GAANNNNTTC 1 cut(s) 1532
XspI CTAG 1 cut(s) 1029
Zsp2I ATGCAT 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.