RchiOBHm_Chr1g0366731
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
57171294 .. 57188254
16961 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59126

Sequence Viewer

Length: 1632 bp
ATGTCAAGCAAAAAGGTGTTCAACTTGTTTGGTCTGAGAATGGGCGGAGGAGGAGAGGGTCATGCAATAGGGATTGACTTAGGGACAACCAACTCGTGCGTTGCGGTGTGGGAGAACGATCATGTTGAAGTGATAGTGAATGATCAGGGCAGTAAGACCACTCCCTCTTGTGTTGCTTTCACTGATACACAGAGCTTGGTAGGTGATGCAGCACTTGACCAGATTATCCGAAACCCCGCCAACACTATTTTTGATGCAAAGAGGTTGATTGGCAGGAGATTCAGTGATGCTTCTGTTCAAAATGACATGAAGCTCTGGCCATTCAAGGTTACTAAGGGTCCCGAGGACAAGCCTATGATTGTGGTTACCCAGGAGGGTAAAGAAAAAAGATTTTCTGCAGAGGAAATCTCATCCATGGTTCTTGCAAAGATGCGGGAGGTTGCTGGGGCATACCTCGGCTCAACTGTGAAGAACGCAGTTATCACTGTCCCTGCATATTTCAATAATTCACAGCGGCAGGATACATATGATGCAGGTACCACCGCTGGCCTAAATGTGATGCGTATAATAAATGAACCAACTGCTGCAGCAATTGCTTATGGCCTTAACAAGAAAGCTGGCTGGTATAGCAAGAGAAATGTGGTAATATTTGATTTGGGCGGTGGTACTTTAGATGTGTCGCTGCTTAACATAGGGGATGATGTTTTTGAAGTGAAGGCCACTGCTGGAGACACTCATCTCGGAGGTGAAGACTTTGATAACAAAATGGTGGATTATTGCGTTGAGGAATTTAAGAGGAAGCATCAATTGGACGTCAGTGGTAACACCAGAGCTCTTAGGAGGATAAGAAATGAATGTGAAAAGGCAAAGAAGAGGCTTTCATTTGCTTGCTCTGTTGACATTGAAATTGATTGTTTGTTCTCGAGTACTGATTTCTATATAACATTTACTCGTGACAAATTTGAACACATCAACATGGATTTGTTTAAAAAGTGTATGGAGCCAGTGGGGAAGTGTTTGAGGGATGCTAAAATGGACACAAGCAGTGTCGATGATATTGTTCTTATTGGTGGCTCTTCTAGAATTCCCGGGGTGCAGCAGCTATTGCAGGATGTGTTCAAAGGGAAGGAGCTTTGCAAAGGAATAAATCCTGAAGAGGCTGTGGCTTATGGTGCAGCTGTTCAAGCAGCAGTCTTGAATGGGAATGGAAATGGAATTGGAAAGCTTAAAGACTTCACTCTCACGGATGTCACCCCAATGTCCCTTGGGGTTAGGACTGGGAGTCGTACTTCTGAGGAGTCTGATATTATGGCTGTTGTGATACCAAGAAACACTAGAATTCCAGTCATAAAGAACGAAACTTTTGCCACTTCCGAAGACAACCAAATTTCAGCCCCATTTACTATCTTCGAGGGCGAGAGTGAAACAACCTTAAACAATAATCTTCTGGGTGAATTTATCCTTCATGACCTTCCTTCAGCTCCCAAGGCTGCTGTTGAGTTCAGTGTTTGCTTTGATATTGATGCAAATGGTATCTTGAGTGTCTCTGCTGAAGAGAAATCTACAGGCAAGAGAAAAGAGATTACTATTGCTTGTGACAGAAGAACATTAAGGATTGAGAAGATGAGGTGA
Functional Annotation

Protein Analysis

543

Amino Acids

59.4

Weight (kDa)

5.56

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 22 - 535 1.1e-198 Hsp70 protein
MreB_Mbl PF06723 155 - 394 2.1e-14 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 816
Acc36I ACCTGC 1 cut(s) 524
Acc65I GGTACC 1 cut(s) 536
AccB1I GGYRCC 1 cut(s) 536
AciI CCGC 7 cut(s) 45, 104, 237, 433, 514, 543, 660
AcoI YGGCCR 1 cut(s) 317
AcsI RAATTY 6 cut(s) 788, 959, 1083, 1338, 1386, 1454
AcuI CTGAAG 3 cut(s) 1173, 1461, 1572
AcyI GRCGYC 1 cut(s) 813
AfaI GTAC 4 cut(s) 538, 667, 928, 1288
AhdI GACNNNNNGTC 1 cut(s) 1281
AjnI CCWGG 1 cut(s) 369
AjuI GAANNNNNNNTTGG 2 cut(s) 791, 823
AluBI AGCT 9 cut(s) 195, 313, 617, 833, 1102, 1132, 1178, 1225, 1481
AluI AGCT 9 cut(s) 195, 313, 617, 833, 1102, 1132, 1178, 1225, 1481
Alw21I GWGCWC 1 cut(s) 835
Alw26I GTCTC 2 cut(s) 723, 1549
Ama87I CYCGRG 3 cut(s) 341, 922, 1088
AoxI GGCC 4 cut(s) 317, 547, 601, 717
ApeKI GCWGC 9 cut(s) 209, 584, 587, 682, 1096, 1099, 1175, 1187, 1490
ApoI RAATTY 6 cut(s) 788, 959, 1083, 1338, 1386, 1454
Asp718I GGTACC 1 cut(s) 536
AspS9I GGNCC 1 cut(s) 338
AsuC2I CCSGG 2 cut(s) 1089, 1090
AsuHPI GGTGA 4 cut(s) 215, 758, 1243, 1463
AvaI CYCGRG 3 cut(s) 341, 922, 1088
AvaII GGWCC 1 cut(s) 338
BalI TGGCCA 1 cut(s) 319
BanI GGYRCC 1 cut(s) 536
BanII GRGCYC 1 cut(s) 835
BauI CACGAG 2 cut(s) 94, 951
BbsI GAAGAC 2 cut(s) 756, 1383
Bbv12I GWGCWC 1 cut(s) 835
BbvI GCAGC 9 cut(s) 221, 571, 599, 669, 1108, 1111, 1187, 1199, 1477
BcgI CGANNNNNNTGC 2 cut(s) 1346, 1380
BciT130I CCWGG 1 cut(s) 371
BciVI GTATCC 1 cut(s) 514
BclI TGATCA 1 cut(s) 142
BcnI CCSGG 2 cut(s) 1089, 1090
BcoDI GTCTC 2 cut(s) 723, 1549
BfaI CTAG 2 cut(s) 1080, 1335
BfmI CTRYAG 3 cut(s) 396, 585, 1563
BfuAI ACCTGC 1 cut(s) 524
BfuI GTATCC 1 cut(s) 514
BmcAI AGTACT 1 cut(s) 928
Bme1390I CCNGG 3 cut(s) 371, 1089, 1090
Bme18I GGWCC 1 cut(s) 338
BmeRI GACNNNNNGTC 1 cut(s) 1281
BmeT110I CYCGRG 3 cut(s) 341, 922, 1088
BmgT120I GGNCC 1 cut(s) 338
BmiI GGNNCC 4 cut(s) 339, 340, 538, 1002
BmrFI CCNGG 3 cut(s) 371, 1089, 1090
BmrI ACTGGG 1 cut(s) 1287
BmsI GCATC 9 cut(s) 196, 244, 277, 420, 520, 549, 811, 1015, 1513
BmuI ACTGGG 1 cut(s) 1287
BpiI GAAGAC 2 cut(s) 756, 1383
BplI GAGNNNNNCTC 2 cut(s) 392, 424
BpmI CTGGAG 1 cut(s) 747
BpuEI CTTGAG 1 cut(s) 1558
BpuMI CCSGG 2 cut(s) 1089, 1090
BsaHI GRCGYC 1 cut(s) 813
BsaJI CCNNGG 8 cut(s) 342, 369, 414, 454, 1088, 1089, 1264, 1485
BsaXI ACNNNNNCTCC 2 cut(s) 268, 298
Bse1I ACTGG 3 cut(s) 1004, 1282, 1343
BseBI CCWGG 1 cut(s) 371
BseDI CCNNGG 8 cut(s) 342, 369, 414, 454, 1088, 1089, 1264, 1485
BseGI GGATG 5 cut(s) 410, 703, 1030, 1117, 1252
BseMII CTCAG 2 cut(s) 26, 1284
BseNI ACTGG 3 cut(s) 1004, 1282, 1343
BseRI GAGGAG 3 cut(s) 63, 66, 1310
BseXI GCAGC 9 cut(s) 221, 571, 599, 669, 1108, 1111, 1187, 1199, 1477
BseYI CCCAGC 1 cut(s) 443
BsgI GTGCAG 2 cut(s) 1115, 1194
BshFI GGCC 4 cut(s) 319, 549, 603, 719
BshNI GGYRCC 1 cut(s) 536
BsiHKAI GWGCWC 1 cut(s) 835
BsiHKCI CYCGRG 3 cut(s) 341, 922, 1088
BsiSI CCGG 1 cut(s) 1089
BslFI GGGAC 4 cut(s) 97, 324, 473, 1246
BsmAI GTCTC 2 cut(s) 723, 1549
BsmFI GGGAC 4 cut(s) 97, 324, 473, 1246
BsnI GGCC 4 cut(s) 319, 549, 603, 719
BsoBI CYCGRG 3 cut(s) 341, 922, 1088
Bsp1286I GDGCHC 1 cut(s) 835
Bsp143I GATC 2 cut(s) 118, 142
Bsp19I CCATGG 1 cut(s) 414
BspACI CCGC 7 cut(s) 45, 104, 237, 433, 514, 543, 660
BspANI GGCC 4 cut(s) 319, 549, 603, 719
BspCNI CTCAG 2 cut(s) 27, 1285
BspHI TCATGA 1 cut(s) 1465
BspLI GGNNCC 4 cut(s) 339, 340, 538, 1002
BspMAI CTGCAG 2 cut(s) 400, 589
BspMI ACCTGC 1 cut(s) 524
BspQI GCTCTTC 1 cut(s) 1081
BspT107I GGYRCC 1 cut(s) 536
BsrI ACTGG 3 cut(s) 1004, 1282, 1343
BssECI CCNNGG 8 cut(s) 342, 369, 414, 454, 1088, 1089, 1264, 1485
BssMI GATC 2 cut(s) 118, 142
BssNI GRCGYC 1 cut(s) 813
BssSI CACGAG 2 cut(s) 94, 951
BssT1I CCWWGG 3 cut(s) 414, 1264, 1485
Bst2BI CACGAG 2 cut(s) 94, 951
Bst2UI CCWGG 1 cut(s) 371
Bst4CI ACNGT 2 cut(s) 466, 487
Bst6I CTCTTC 4 cut(s) 866, 1081, 1149, 1548
BstACI GRCGYC 1 cut(s) 813
BstAPI GCANNNNNTGC 2 cut(s) 593, 1105
BstC8I GCNNGC 3 cut(s) 547, 619, 889
BstDEI CTNAG 5 cut(s) 35, 79, 333, 836, 1293
BstDSI CCRYGG 1 cut(s) 414
BstEII GGTNACC 1 cut(s) 364
BstF5I GGATG 5 cut(s) 410, 703, 1030, 1117, 1252
BstKTI GATC 2 cut(s) 121, 145
BstMAI GTCTC 2 cut(s) 723, 1549
BstMBI GATC 2 cut(s) 118, 142
BstMWI GCNNNNNNNGC 6 cut(s) 593, 627, 1105, 1172, 1184, 1487
BstNI CCWGG 1 cut(s) 371
BstPI GGTNACC 1 cut(s) 364
BstSCI CCNGG 3 cut(s) 369, 1087, 1088
BstSFI CTRYAG 3 cut(s) 396, 585, 1563
BstV1I GCAGC 9 cut(s) 221, 571, 599, 669, 1108, 1111, 1187, 1199, 1477
BstV2I GAAGAC 2 cut(s) 756, 1383
BsuI GTATCC 1 cut(s) 514
BsuRI GGCC 4 cut(s) 319, 549, 603, 719
BtgI CCRYGG 1 cut(s) 414
BtsCI GGATG 5 cut(s) 410, 703, 1030, 1117, 1252
BtsI GCAGTG 2 cut(s) 720, 1051
BtsIMutI CAGTG 8 cut(s) 180, 289, 483, 720, 823, 1011, 1051, 1510
BveI ACCTGC 1 cut(s) 524
Cac8I GCNNGC 3 cut(s) 547, 619, 889
CciI TCATGA 1 cut(s) 1465
Cfr13I GGNCC 1 cut(s) 338
Cfr9I CCCGGG 1 cut(s) 1088
Csp6I GTAC 4 cut(s) 537, 666, 927, 1287
CviAII CATG 6 cut(s) 62, 122, 307, 415, 976, 1466
CviQI GTAC 4 cut(s) 537, 666, 927, 1287
DdeI CTNAG 5 cut(s) 35, 79, 333, 836, 1293
DpnI GATC 2 cut(s) 120, 144
DpnII GATC 2 cut(s) 118, 142
DraI TTTAAA 1 cut(s) 988
DriI GACNNNNNGTC 1 cut(s) 1281
EaeI YGGCCR 1 cut(s) 317
Eam1104I CTCTTC 4 cut(s) 866, 1081, 1149, 1548
Eam1105I GACNNNNNGTC 1 cut(s) 1281
EarI CTCTTC 4 cut(s) 866, 1081, 1149, 1548
EciI GGCGGA 1 cut(s) 60
Ecl136II GAGCTC 1 cut(s) 833
Eco130I CCWWGG 3 cut(s) 414, 1264, 1485
Eco24I GRGCYC 1 cut(s) 835
Eco47I GGWCC 1 cut(s) 338
Eco53kI GAGCTC 1 cut(s) 833
Eco57I CTGAAG 3 cut(s) 1173, 1461, 1572
Eco88I CYCGRG 3 cut(s) 341, 922, 1088
Eco91I GGTNACC 1 cut(s) 364
EcoICRI GAGCTC 1 cut(s) 833
EcoO109I RGGNCCY 1 cut(s) 338
EcoO65I GGTNACC 1 cut(s) 364
EcoRI GAATTC 2 cut(s) 1083, 1338
EcoRII CCWGG 1 cut(s) 369
EcoT14I CCWWGG 3 cut(s) 414, 1264, 1485
EcoT38I GRGCYC 1 cut(s) 835
ErhI CCWWGG 3 cut(s) 414, 1264, 1485
FaeI CATG 6 cut(s) 65, 125, 310, 418, 979, 1469
FaqI GGGAC 4 cut(s) 97, 324, 473, 1246
FatI CATG 6 cut(s) 61, 121, 306, 414, 975, 1465
FauI CCCGC 2 cut(s) 244, 426
FauNDI CATATG 1 cut(s) 526
FbaI TGATCA 1 cut(s) 142
FokI GGATG 5 cut(s) 397, 710, 1037, 1124, 1259
FriOI GRGCYC 1 cut(s) 835
FspBI CTAG 2 cut(s) 1080, 1335
GsaI CCCAGC 1 cut(s) 447
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 4 cut(s) 319, 549, 603, 719
HapII CCGG 1 cut(s) 1089
Hin1I GRCGYC 1 cut(s) 813
Hin1II CATG 6 cut(s) 65, 125, 310, 418, 979, 1469
HincII GTYRAC 1 cut(s) 898
HindII GTYRAC 1 cut(s) 898
HindIII AAGCTT 1 cut(s) 1223
HinfI GANTC 3 cut(s) 279, 1282, 1298
HpaII CCGG 1 cut(s) 1089
HphI GGTGA 4 cut(s) 215, 758, 1243, 1463
Hpy166II GTNNAC 1 cut(s) 898
Hpy188I TCNGA 6 cut(s) 36, 230, 743, 1294, 1303, 1375
Hpy188III TCNNGA 8 cut(s) 341, 922, 953, 1080, 1151, 1195, 1466, 1537
Hpy8I GTNNAC 1 cut(s) 898
HpyAV CCTTC 5 cut(s) 709, 1120, 1472, 1481, 1485
HpyCH4III ACNGT 2 cut(s) 466, 487
HpyCH4IV ACGT 1 cut(s) 813
HpyF10VI GCNNNNNNNGC 6 cut(s) 593, 627, 1105, 1172, 1184, 1487
HpyF3I CTNAG 5 cut(s) 35, 79, 333, 836, 1293
HpySE526I ACGT 1 cut(s) 813
Hsp92I GRCGYC 1 cut(s) 813
Hsp92II CATG 6 cut(s) 65, 125, 310, 418, 979, 1469
KflI GGGWCCC 1 cut(s) 338
KpnI GGTACC 1 cut(s) 540
Ksp22I TGATCA 1 cut(s) 142
Kzo9I GATC 2 cut(s) 118, 142
LguI GCTCTTC 1 cut(s) 1081
LmnI GCTCC 3 cut(s) 1000, 1129, 1486
Lsp1109I GCAGC 9 cut(s) 221, 571, 599, 669, 1108, 1111, 1187, 1199, 1477
LweI GCATC 9 cut(s) 196, 244, 277, 420, 520, 549, 811, 1015, 1513
MaeI CTAG 2 cut(s) 1080, 1335
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 6 cut(s) 328, 364, 821, 953, 1249, 1595
MalI GATC 2 cut(s) 120, 144
MboI GATC 2 cut(s) 118, 142
MfeI CAATTG 2 cut(s) 591, 806
MhlI GDGCHC 1 cut(s) 835
MlsI TGGCCA 1 cut(s) 319
MluNI TGGCCA 1 cut(s) 319
MlyI GAGTC 2 cut(s) 1291, 1307
Mox20I TGGCCA 1 cut(s) 319
MscI TGGCCA 1 cut(s) 319
MseI TTAA 7 cut(s) 606, 687, 792, 987, 1227, 1433, 1610
MslI CAYNNNNRTG 2 cut(s) 974, 1256
Msp20I TGGCCA 1 cut(s) 319
MspA1I CMGCKG 3 cut(s) 514, 545, 1178
MspI CCGG 1 cut(s) 1089
MspR9I CCNGG 3 cut(s) 371, 1089, 1090
MunI CAATTG 2 cut(s) 591, 806
MvaI CCWGG 1 cut(s) 371
MwoI GCNNNNNNNGC 6 cut(s) 593, 627, 1105, 1172, 1184, 1487
NciI CCSGG 2 cut(s) 1089, 1090
NcoI CCATGG 1 cut(s) 414
NdeI CATATG 1 cut(s) 526
NdeII GATC 2 cut(s) 118, 142
NlaIII CATG 6 cut(s) 65, 125, 310, 418, 979, 1469
NlaIV GGNNCC 4 cut(s) 339, 340, 538, 1002
NmeAIII GCCGAG 1 cut(s) 435
NmuCI GTSAC 3 cut(s) 953, 1249, 1595
PaeR7I CTCGAG 1 cut(s) 922
PagI TCATGA 1 cut(s) 1465
PciSI GCTCTTC 1 cut(s) 1081
PfeI GAWTC 1 cut(s) 279
PleI GAGTC 2 cut(s) 1290, 1306
PpsI GAGTC 2 cut(s) 1290, 1306
PpuMI RGGWCCY 1 cut(s) 338
Psp124BI GAGCTC 1 cut(s) 835
Psp5II RGGWCCY 1 cut(s) 338
Psp6I CCWGG 1 cut(s) 369
PspEI GGTNACC 1 cut(s) 364
PspFI CCCAGC 1 cut(s) 443
PspGI CCWGG 1 cut(s) 369
PspN4I GGNNCC 4 cut(s) 339, 340, 538, 1002
PspPI GGNCC 1 cut(s) 338
PspPPI RGGWCCY 1 cut(s) 338
PstI CTGCAG 2 cut(s) 400, 589
PvuII CAGCTG 1 cut(s) 1178
RsaI GTAC 4 cut(s) 538, 667, 928, 1288
RsaNI GTAC 4 cut(s) 537, 666, 927, 1287
RseI CAYNNNNRTG 2 cut(s) 974, 1256
SacI GAGCTC 1 cut(s) 835
SapI GCTCTTC 1 cut(s) 1081
SaqAI TTAA 7 cut(s) 606, 687, 792, 987, 1227, 1433, 1610
Sau3AI GATC 2 cut(s) 118, 142
Sau96I GGNCC 1 cut(s) 338
ScaI AGTACT 1 cut(s) 928
SchI GAGTC 2 cut(s) 1291, 1307
ScrFI CCNGG 3 cut(s) 371, 1089, 1090
SduI GDGCHC 1 cut(s) 835
SfaNI GCATC 9 cut(s) 196, 244, 277, 420, 520, 549, 811, 1015, 1513
SfcI CTRYAG 3 cut(s) 396, 585, 1563
Sfr274I CTCGAG 1 cut(s) 922
SinI GGWCC 1 cut(s) 338
SlaI CTCGAG 1 cut(s) 922
SmaI CCCGGG 1 cut(s) 1090
SmiMI CAYNNNNRTG 2 cut(s) 974, 1256
SmlI CTYRAG 2 cut(s) 922, 1537
SmoI CTYRAG 2 cut(s) 922, 1537
SsiI CCGC 7 cut(s) 45, 104, 237, 433, 514, 543, 660
SspI AATATT 1 cut(s) 648
SspMI CTAG 2 cut(s) 1080, 1335
SstI GAGCTC 1 cut(s) 835
StyD4I CCNGG 3 cut(s) 369, 1087, 1088
StyI CCWWGG 3 cut(s) 414, 1264, 1485
TaaI ACNGT 2 cut(s) 466, 487
TaiI ACGT 1 cut(s) 816
TaqI TCGA 3 cut(s) 923, 1050, 1410
TatI WGTACW 1 cut(s) 926
TauI GCSGC 1 cut(s) 517
TfiI GAWTC 1 cut(s) 279
Tru1I TTAA 7 cut(s) 606, 687, 792, 987, 1227, 1433, 1610
Tru9I TTAA 7 cut(s) 606, 687, 792, 987, 1227, 1433, 1610
TscAI CASTG 8 cut(s) 187, 289, 490, 727, 823, 1011, 1051, 1510
TseFI GTSAC 3 cut(s) 953, 1249, 1595
TseI GCWGC 9 cut(s) 209, 584, 587, 682, 1096, 1099, 1175, 1187, 1490
Tsp45I GTSAC 3 cut(s) 953, 1249, 1595
TspDTI ATGAA 5 cut(s) 323, 588, 867, 870, 1454
TspGWI ACGGA 1 cut(s) 1259
TspMI CCCGGG 1 cut(s) 1088
TspRI CASTG 8 cut(s) 187, 289, 490, 727, 823, 1011, 1051, 1510
VpaK11BI GGWCC 1 cut(s) 338
XapI RAATTY 6 cut(s) 788, 959, 1083, 1338, 1386, 1454
XbaI TCTAGA 1 cut(s) 1079
XhoI CTCGAG 1 cut(s) 922
XmaI CCCGGG 1 cut(s) 1088
XspI CTAG 2 cut(s) 1080, 1335
ZraI GACGTC 1 cut(s) 814
ZrmI AGTACT 1 cut(s) 928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.