mediator of RNA polymerase II transcription subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HSP70 | PF00012 | 49 - 112 | 3.2e-24 | Hsp70 protein |
| MreB_Mbl | PF06723 | 49 - 377 | 1.5e-18 | MreB/Mbl protein |
| HSP70 | PF00012 | 112 - 512 | 5.6e-158 | Hsp70 protein |
| HSP70 | PF00012 | 506 - 685 | 1.3e-79 | Hsp70 protein |
| MreB_Mbl | PF06723 | 516 - 651 | 1.8e-11 | MreB/Mbl protein |
| HSP70 | PF00012 | 685 - 828 | 4.3e-37 | Hsp70 protein |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 476 |
| Acc16I | TGCGCA | 1 cut(s) | 515 |
| Acc36I | ACCTGC | 2 cut(s) | 128, 476 |
| AccB1I | GGYRCC | 2 cut(s) | 1124, 2225 |
| AccIII | TCCGGA | 2 cut(s) | 1102, 2203 |
| AclWI | GGATC | 2 cut(s) | 161, 2134 |
| AcoI | YGGCCR | 1 cut(s) | 1504 |
| AcsI | RAATTY | 6 cut(s) | 424, 911, 1035, 1293, 1391, 2136 |
| AcuI | CTGAAG | 2 cut(s) | 372, 2007 |
| AcyI | GRCGYC | 1 cut(s) | 1581 |
| AfaI | GTAC | 4 cut(s) | 85, 493, 1002, 1801 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1513, 2391 |
| AgeI | ACCGGT | 1 cut(s) | 1276 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2050 |
| AjiI | CACGTC | 1 cut(s) | 1948 |
| AjnI | CCWGG | 3 cut(s) | 159, 300, 1421 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 314, 346, 1925, 1957 |
| AleI | CACNNNNGTG | 1 cut(s) | 1190 |
| Alw26I | GTCTC | 7 cut(s) | 675, 839, 1486, 1857, 1977, 2315, 2336 |
| AlwI | GGATC | 2 cut(s) | 161, 2134 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 443, 2030, 2155 |
| Aor13HI | TCCGGA | 2 cut(s) | 1102, 2203 |
| AoxI | GGCC | 9 cut(s) | 399, 499, 567, 669, 953, 1116, 1504, 1681, 1851 |
| ApoI | RAATTY | 6 cut(s) | 424, 911, 1035, 1293, 1391, 2136 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 641, 673 |
| AseI | ATTAAT | 1 cut(s) | 1098 |
| AsiGI | ACCGGT | 1 cut(s) | 1276 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1543 |
| AspLEI | GCGC | 1 cut(s) | 516 |
| AspS9I | GGNCC | 2 cut(s) | 237, 953 |
| AsuHPI | GGTGA | 8 cut(s) | 296, 710, 1166, 1192, 1364, 1841, 1862, 2465 |
| AvaII | GGWCC | 1 cut(s) | 237 |
| BaeGI | GKGCMC | 1 cut(s) | 2502 |
| BanI | GGYRCC | 2 cut(s) | 1124, 2225 |
| BanII | GRGCYC | 1 cut(s) | 1521 |
| BauI | CACGAG | 1 cut(s) | 175 |
| BbsI | GAAGAC | 3 cut(s) | 708, 1890, 2337 |
| BbvCI | CCTCAGC | 2 cut(s) | 396, 1488 |
| BccI | CCATC | 5 cut(s) | 253, 281, 335, 1826, 2393 |
| BceAI | ACGGC | 1 cut(s) | 1872 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1697, 1731 |
| BciT130I | CCWGG | 3 cut(s) | 161, 302, 1423 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcoDI | GTCTC | 7 cut(s) | 675, 839, 1486, 1857, 1977, 2315, 2336 |
| BfaI | CTAG | 2 cut(s) | 2133, 2312 |
| BfmI | CTRYAG | 5 cut(s) | 135, 537, 1719, 2241, 2403 |
| BfuAI | ACCTGC | 2 cut(s) | 128, 476 |
| BlpI | GCTNAGC | 1 cut(s) | 735 |
| BmcAI | AGTACT | 1 cut(s) | 85 |
| Bme1390I | CCNGG | 3 cut(s) | 161, 302, 1423 |
| Bme18I | GGWCC | 1 cut(s) | 237 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2050 |
| BmgBI | CACGTC | 1 cut(s) | 1948 |
| BmgT120I | GGNCC | 2 cut(s) | 237, 953 |
| BmiI | GGNNCC | 3 cut(s) | 954, 1126, 2227 |
| BmrFI | CCNGG | 3 cut(s) | 161, 302, 1423 |
| BmsI | GCATC | 6 cut(s) | 501, 525, 880, 967, 1479, 1683 |
| BpiI | GAAGAC | 3 cut(s) | 708, 1890, 2337 |
| BpmI | CTGGAG | 4 cut(s) | 699, 1398, 1881, 2470 |
| Bpu10I | CCTNAGC | 2 cut(s) | 396, 1488 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 735 |
| BpuEI | CTTGAG | 1 cut(s) | 1168 |
| BsaBI | GATNNNNATC | 3 cut(s) | 515, 1697, 2384 |
| BsaHI | GRCGYC | 1 cut(s) | 1581 |
| BsaJI | CCNNGG | 7 cut(s) | 160, 406, 1041, 1421, 1548, 1854, 1873 |
| BsaWI | WCCGGW | 3 cut(s) | 1102, 1276, 2203 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1577, 1607 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1513, 2391 |
| Bse118I | RCCGGY | 4 cut(s) | 569, 1276, 1502, 2120 |
| Bse1I | ACTGG | 3 cut(s) | 98, 1171, 1194 |
| Bse3DI | GCAATG | 1 cut(s) | 543 |
| Bse8I | GATNNNNATC | 3 cut(s) | 515, 1697, 2384 |
| BseAI | TCCGGA | 2 cut(s) | 1102, 2203 |
| BseBI | CCWGG | 3 cut(s) | 161, 302, 1423 |
| BseDI | CCNNGG | 7 cut(s) | 160, 406, 1041, 1421, 1548, 1854, 1873 |
| BseGI | GGATG | 8 cut(s) | 631, 1111, 1201, 1470, 1496, 2170, 2212, 2299 |
| BseJI | GATNNNNATC | 3 cut(s) | 515, 1697, 2384 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1513, 2391 |
| BseMI | GCAATG | 1 cut(s) | 543 |
| BseMII | CTCAG | 8 cut(s) | 119, 261, 387, 726, 834, 1299, 1479, 2046 |
| BseNI | ACTGG | 3 cut(s) | 98, 1171, 1194 |
| BseRI | GAGGAG | 2 cut(s) | 838, 1893 |
| BseSI | GKGCMC | 1 cut(s) | 2502 |
| BsgI | GTGCAG | 2 cut(s) | 1067, 2168 |
| BshFI | GGCC | 9 cut(s) | 401, 501, 569, 671, 955, 1118, 1506, 1683, 1853 |
| BshNI | GGYRCC | 2 cut(s) | 1124, 2225 |
| BshTI | ACCGGT | 1 cut(s) | 1276 |
| BsiSI | CCGG | 6 cut(s) | 570, 1103, 1277, 1503, 2121, 2204 |
| BslFI | GGGAC | 4 cut(s) | 178, 425, 1193, 1607 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1513, 2391 |
| BsmAI | GTCTC | 7 cut(s) | 675, 839, 1486, 1857, 1977, 2315, 2336 |
| BsmBI | CGTCTC | 1 cut(s) | 1977 |
| BsmFI | GGGAC | 4 cut(s) | 178, 425, 1193, 1607 |
| BsmI | GAATGC | 3 cut(s) | 257, 293, 1612 |
| BsnI | GGCC | 9 cut(s) | 401, 501, 569, 671, 955, 1118, 1506, 1683, 1853 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1521, 2502 |
| Bsp13I | TCCGGA | 2 cut(s) | 1102, 2203 |
| Bsp143I | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 735 |
| Bsp19I | CCATGG | 1 cut(s) | 1548 |
| BspANI | GGCC | 9 cut(s) | 401, 501, 569, 671, 955, 1118, 1506, 1683, 1853 |
| BspCNI | CTCAG | 8 cut(s) | 118, 262, 388, 727, 835, 1300, 1480, 2047 |
| BspEI | TCCGGA | 2 cut(s) | 1102, 2203 |
| BspHI | TCATGA | 1 cut(s) | 2349 |
| BspLI | GGNNCC | 3 cut(s) | 954, 1126, 2227 |
| BspMAI | CTGCAG | 4 cut(s) | 139, 541, 1723, 2245 |
| BspMI | ACCTGC | 2 cut(s) | 128, 476 |
| BspPI | GGATC | 2 cut(s) | 161, 2134 |
| BspQI | GCTCTTC | 1 cut(s) | 1033 |
| BspT107I | GGYRCC | 2 cut(s) | 1124, 2225 |
| BsrDI | GCAATG | 1 cut(s) | 543 |
| BsrFI | RCCGGY | 4 cut(s) | 569, 1276, 1502, 2120 |
| BsrI | ACTGG | 3 cut(s) | 98, 1171, 1194 |
| BssAI | RCCGGY | 4 cut(s) | 569, 1276, 1502, 2120 |
| BssECI | CCNNGG | 7 cut(s) | 160, 406, 1041, 1421, 1548, 1854, 1873 |
| BssMI | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| BssNI | GRCGYC | 1 cut(s) | 1581 |
| BssSI | CACGAG | 1 cut(s) | 175 |
| BssT1I | CCWWGG | 4 cut(s) | 406, 1041, 1548, 1873 |
| Bst2BI | CACGAG | 1 cut(s) | 175 |
| Bst2UI | CCWGG | 3 cut(s) | 161, 302, 1423 |
| Bst6I | CTCTTC | 2 cut(s) | 81, 1033 |
| BstACI | GRCGYC | 1 cut(s) | 1581 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 143, 545, 1057, 1727, 2158 |
| BstC8I | GCNNGC | 3 cut(s) | 499, 1669, 1681 |
| BstDSI | CCRYGG | 2 cut(s) | 1548, 1854 |
| BstF5I | GGATG | 8 cut(s) | 631, 1111, 1201, 1470, 1496, 2170, 2212, 2299 |
| BstHHI | GCGC | 1 cut(s) | 516 |
| BstKTI | GATC | 7 cut(s) | 49, 156, 202, 226, 2061, 2129, 2433 |
| BstMAI | GTCTC | 7 cut(s) | 675, 839, 1486, 1857, 1977, 2315, 2336 |
| BstMBI | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 143, 545, 1057, 1124, 1136, 1727, 2158, 2225, 2237 |
| BstNI | CCWGG | 3 cut(s) | 161, 302, 1423 |
| BstNSI | RCATGY | 1 cut(s) | 1992 |
| BstSCI | CCNGG | 3 cut(s) | 159, 300, 1421 |
| BstSFI | CTRYAG | 5 cut(s) | 135, 537, 1719, 2241, 2403 |
| BstSLI | GKGCMC | 1 cut(s) | 2502 |
| BstV2I | GAAGAC | 3 cut(s) | 708, 1890, 2337 |
| BstX2I | RGATCY | 1 cut(s) | 2126 |
| BstYI | RGATCY | 1 cut(s) | 2126 |
| BsuRI | GGCC | 9 cut(s) | 401, 501, 569, 671, 955, 1118, 1506, 1683, 1853 |
| BtgI | CCRYGG | 2 cut(s) | 1548, 1854 |
| BtrI | CACGTC | 1 cut(s) | 1948 |
| BtsCI | GGATG | 8 cut(s) | 631, 1111, 1201, 1470, 1496, 2170, 2212, 2299 |
| BtsI | GCAGTG | 2 cut(s) | 2104, 2500 |
| BtsIMutI | CAGTG | 8 cut(s) | 658, 727, 1187, 1596, 1617, 2028, 2104, 2500 |
| BveI | ACCTGC | 2 cut(s) | 128, 476 |
| Cac8I | GCNNGC | 3 cut(s) | 499, 1669, 1681 |
| CaiI | CAGNNNCTG | 3 cut(s) | 443, 2030, 2155 |
| CciI | TCATGA | 1 cut(s) | 2349 |
| CfoI | GCGC | 1 cut(s) | 516 |
| Cfr10I | RCCGGY | 4 cut(s) | 569, 1276, 1502, 2120 |
| Cfr13I | GGNCC | 2 cut(s) | 237, 953 |
| CseI | GACGC | 3 cut(s) | 1589, 1637, 1994 |
| CsiI | ACCWGGT | 1 cut(s) | 300 |
| Csp6I | GTAC | 4 cut(s) | 84, 492, 1001, 1800 |
| CspAI | ACCGGT | 1 cut(s) | 1276 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2017, 2052 |
| CviQI | GTAC | 4 cut(s) | 84, 492, 1001, 1800 |
| DpnI | GATC | 7 cut(s) | 48, 155, 201, 225, 2060, 2128, 2432 |
| DpnII | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2050 |
| EaeI | YGGCCR | 1 cut(s) | 1504 |
| Eam1104I | CTCTTC | 2 cut(s) | 81, 1033 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2050 |
| EarI | CTCTTC | 2 cut(s) | 81, 1033 |
| Eco130I | CCWWGG | 4 cut(s) | 406, 1041, 1548, 1873 |
| Eco147I | AGGCCT | 1 cut(s) | 401 |
| Eco24I | GRGCYC | 1 cut(s) | 1521 |
| Eco47I | GGWCC | 1 cut(s) | 237 |
| Eco57I | CTGAAG | 2 cut(s) | 372, 2007 |
| EcoO109I | RGGNCCY | 1 cut(s) | 953 |
| EcoRI | GAATTC | 2 cut(s) | 1035, 2136 |
| EcoRII | CCWGG | 3 cut(s) | 159, 300, 1421 |
| EcoT14I | CCWWGG | 4 cut(s) | 406, 1041, 1548, 1873 |
| EcoT38I | GRGCYC | 1 cut(s) | 1521 |
| ErhI | CCWWGG | 4 cut(s) | 406, 1041, 1548, 1873 |
| Esp3I | CGTCTC | 1 cut(s) | 1977 |
| FaqI | GGGAC | 4 cut(s) | 178, 425, 1193, 1607 |
| FauI | CCCGC | 4 cut(s) | 112, 378, 605, 1560 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| FokI | GGATG | 8 cut(s) | 638, 1118, 1208, 1457, 1483, 2177, 2219, 2306 |
| FriOI | GRGCYC | 1 cut(s) | 1521 |
| FspAI | RTGCGCAY | 1 cut(s) | 515 |
| FspBI | CTAG | 2 cut(s) | 2133, 2312 |
| FspI | TGCGCA | 1 cut(s) | 515 |
| GlaI | GCGC | 1 cut(s) | 515 |
| GsuI | CTGGAG | 4 cut(s) | 699, 1398, 1881, 2470 |
| HaeIII | GGCC | 9 cut(s) | 401, 501, 569, 671, 955, 1118, 1506, 1683, 1853 |
| HapII | CCGG | 6 cut(s) | 570, 1103, 1277, 1503, 2121, 2204 |
| HgaI | GACGC | 3 cut(s) | 1589, 1637, 1994 |
| HhaI | GCGC | 1 cut(s) | 516 |
| Hin1I | GRCGYC | 1 cut(s) | 1581 |
| Hin6I | GCGC | 1 cut(s) | 514 |
| HinP1I | GCGC | 1 cut(s) | 514 |
| HincII | GTYRAC | 1 cut(s) | 724 |
| HindII | GTYRAC | 1 cut(s) | 724 |
| HindIII | AAGCTT | 3 cut(s) | 1172, 2009, 2270 |
| HinfI | GANTC | 8 cut(s) | 370, 458, 1225, 1255, 1640, 2078, 2362, 2380 |
| HpaII | CCGG | 6 cut(s) | 570, 1103, 1277, 1503, 2121, 2204 |
| HphI | GGTGA | 8 cut(s) | 296, 710, 1166, 1192, 1364, 1841, 1862, 2465 |
| Hpy166II | GTNNAC | 4 cut(s) | 220, 724, 763, 1906 |
| Hpy188I | TCNGA | 3 cut(s) | 844, 1534, 2056 |
| Hpy8I | GTNNAC | 4 cut(s) | 220, 724, 763, 1906 |
| HpyAV | CCTTC | 8 cut(s) | 559, 661, 808, 1507, 1741, 1843, 2068, 2251 |
| HpyCH4IV | ACGT | 3 cut(s) | 759, 1523, 1947 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 143, 545, 1057, 1124, 1136, 1727, 2158, 2225, 2237 |
| HpySE526I | ACGT | 3 cut(s) | 759, 1523, 1947 |
| Hsp92I | GRCGYC | 1 cut(s) | 1581 |
| HspAI | GCGC | 1 cut(s) | 514 |
| Kpn2I | TCCGGA | 2 cut(s) | 1102, 2203 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| LguI | GCTCTTC | 1 cut(s) | 1033 |
| LmnI | GCTCC | 3 cut(s) | 1081, 1423, 2495 |
| LweI | GCATC | 6 cut(s) | 501, 525, 880, 967, 1479, 1683 |
| MabI | ACCWGGT | 1 cut(s) | 300 |
| MaeI | CTAG | 2 cut(s) | 2133, 2312 |
| MaeII | ACGT | 3 cut(s) | 759, 1523, 1947 |
| MaeIII | GTNAC | 5 cut(s) | 1154, 1198, 2307, 2407, 2425 |
| MalI | GATC | 7 cut(s) | 48, 155, 201, 225, 2060, 2128, 2432 |
| MboI | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| MfeI | CAATTG | 2 cut(s) | 1725, 2214 |
| MflI | RGATCY | 1 cut(s) | 2126 |
| MhlI | GDGCHC | 2 cut(s) | 1521, 2502 |
| MlyI | GAGTC | 1 cut(s) | 452 |
| MroI | TCCGGA | 2 cut(s) | 1102, 2203 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1543 |
| MseI | TTAA | 5 cut(s) | 453, 797, 893, 1098, 1979 |
| MslI | CAYNNNNRTG | 2 cut(s) | 876, 1190 |
| MspA1I | CMGCKG | 4 cut(s) | 677, 1130, 1679, 2231 |
| MspI | CCGG | 6 cut(s) | 570, 1103, 1277, 1503, 2121, 2204 |
| MspR9I | CCNGG | 3 cut(s) | 161, 302, 1423 |
| MunI | CAATTG | 2 cut(s) | 1725, 2214 |
| Mva1269I | GAATGC | 3 cut(s) | 257, 293, 1612 |
| MvaI | CCWGG | 3 cut(s) | 161, 302, 1423 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 143, 545, 1057, 1124, 1136, 1727, 2158, 2225, 2237 |
| NcoI | CCATGG | 1 cut(s) | 1548 |
| NdeII | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| NlaIV | GGNNCC | 3 cut(s) | 954, 1126, 2227 |
| NmuCI | GTSAC | 4 cut(s) | 1154, 1198, 2307, 2425 |
| NsbI | TGCGCA | 1 cut(s) | 515 |
| NspI | RCATGY | 1 cut(s) | 1992 |
| OliI | CACNNNNGTG | 1 cut(s) | 1190 |
| PagI | TCATGA | 1 cut(s) | 2349 |
| PaqCI | CACCTGC | 1 cut(s) | 476 |
| PceI | AGGCCT | 1 cut(s) | 401 |
| PciSI | GCTCTTC | 1 cut(s) | 1033 |
| PctI | GAATGC | 3 cut(s) | 257, 293, 1612 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1543 |
| PfeI | GAWTC | 7 cut(s) | 370, 1225, 1255, 1640, 2078, 2362, 2380 |
| PflFI | GACNNNGTC | 1 cut(s) | 653 |
| PinAI | ACCGGT | 1 cut(s) | 1276 |
| PleI | GAGTC | 1 cut(s) | 452 |
| PpsI | GAGTC | 1 cut(s) | 452 |
| PshBI | ATTAAT | 1 cut(s) | 1098 |
| Psp6I | CCWGG | 3 cut(s) | 159, 300, 1421 |
| PspGI | CCWGG | 3 cut(s) | 159, 300, 1421 |
| PspN4I | GGNNCC | 3 cut(s) | 954, 1126, 2227 |
| PspPI | GGNCC | 2 cut(s) | 237, 953 |
| PstI | CTGCAG | 4 cut(s) | 139, 541, 1723, 2245 |
| PstNI | CAGNNNCTG | 3 cut(s) | 443, 2030, 2155 |
| PsuI | RGATCY | 1 cut(s) | 2126 |
| PsyI | GACNNNGTC | 1 cut(s) | 653 |
| RsaI | GTAC | 4 cut(s) | 85, 493, 1002, 1801 |
| RsaNI | GTAC | 4 cut(s) | 84, 492, 1001, 1800 |
| RseI | CAYNNNNRTG | 2 cut(s) | 876, 1190 |
| SapI | GCTCTTC | 1 cut(s) | 1033 |
| SaqAI | TTAA | 5 cut(s) | 453, 797, 893, 1098, 1979 |
| Sau3AI | GATC | 7 cut(s) | 46, 153, 199, 223, 2058, 2126, 2430 |
| Sau96I | GGNCC | 2 cut(s) | 237, 953 |
| ScaI | AGTACT | 1 cut(s) | 85 |
| SchI | GAGTC | 1 cut(s) | 452 |
| ScrFI | CCNGG | 3 cut(s) | 161, 302, 1423 |
| SduI | GDGCHC | 2 cut(s) | 1521, 2502 |
| SexAI | ACCWGGT | 1 cut(s) | 300 |
| SfaNI | GCATC | 6 cut(s) | 501, 525, 880, 967, 1479, 1683 |
| SfcI | CTRYAG | 5 cut(s) | 135, 537, 1719, 2241, 2403 |
| SinI | GGWCC | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 876, 1190 |
| SmlI | CTYRAG | 1 cut(s) | 1147 |
| SmoI | CTYRAG | 1 cut(s) | 1147 |
| SseBI | AGGCCT | 1 cut(s) | 401 |
| SspMI | CTAG | 2 cut(s) | 2133, 2312 |
| StuI | AGGCCT | 1 cut(s) | 401 |
| StyD4I | CCNGG | 3 cut(s) | 159, 300, 1421 |
| StyI | CCWWGG | 4 cut(s) | 406, 1041, 1548, 1873 |
| TaiI | ACGT | 3 cut(s) | 762, 1526, 1950 |
| TaqI | TCGA | 5 cut(s) | 156, 333, 1290, 2043, 2061 |
| TatI | WGTACW | 1 cut(s) | 83 |
| TauI | GCSGC | 2 cut(s) | 1130, 2231 |
| TfiI | GAWTC | 7 cut(s) | 370, 1225, 1255, 1640, 2078, 2362, 2380 |
| Tru1I | TTAA | 5 cut(s) | 453, 797, 893, 1098, 1979 |
| Tru9I | TTAA | 5 cut(s) | 453, 797, 893, 1098, 1979 |
| TscAI | CASTG | 8 cut(s) | 658, 734, 1194, 1603, 1624, 2035, 2104, 2507 |
| TseFI | GTSAC | 4 cut(s) | 1154, 1198, 2307, 2425 |
| Tsp45I | GTSAC | 4 cut(s) | 1154, 1198, 2307, 2425 |
| TspDTI | ATGAA | 6 cut(s) | 819, 822, 1476, 2004, 2338, 2436 |
| TspGWI | ACGGA | 1 cut(s) | 1339 |
| TspRI | CASTG | 8 cut(s) | 658, 734, 1194, 1603, 1624, 2035, 2104, 2507 |
| Tth111I | GACNNNGTC | 1 cut(s) | 653 |
| VpaK11BI | GGWCC | 1 cut(s) | 237 |
| VspI | ATTAAT | 1 cut(s) | 1098 |
| XapI | RAATTY | 6 cut(s) | 424, 911, 1035, 1293, 1391, 2136 |
| XbaI | TCTAGA | 1 cut(s) | 2132 |
| XceI | RCATGY | 1 cut(s) | 1992 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1543 |
| XspI | CTAG | 2 cut(s) | 2133, 2312 |
| ZrmI | AGTACT | 1 cut(s) | 85 |