MD01G1128000.v1.1
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
23966884 .. 23969176
2293 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1128000.v1.1.491

Sequence Viewer

Length: 1578 bp
ATGGCAGGAGAAGAAGGCCACGCAATCGGGATTGATCTGGGGACAACGTACTCGTGTGTAGCAGTGTGGGAGCACGACCGTGTGGAAATCATAGTGAACGATCAGGGTAACAGGACCACTCCATCTTGTGTTGCCTTCACTGAGACTGAGCGATTGGTTGGTGATTCAGCCATCAACCAGGTCATCAGGAACCCCACAAACTCCATTTTTGATGCAAAGAGGTTAATTGGTAGGAGATTCAAAGATGCCACTGTTCAAAGTGATTTGAAGCTTTGGCCATTTAAAGTCATTAAAGGTCCTGGCGGCAAGCCCTTGATTGTGGTCACCCATGACGGACAAGAAAAACAGTTTGCTGCCGAAGAAATTTCAGCCATGGTTCTAGCGAAAATGCGGGAGATTGCTGAGGCCTACCTCAATTCCACTGTAAAGAATGCAGTTATCACTGTCCCTGCTTACTTCAATGATTCACAACGTCAGGCTACAAAACATGCTGGAAGCATTGCTGGCCTAAATGTGATGCATATCATCAACGAACCAACTGCTGCAGCGATTGCTTATGGCATTGACAAGAAGGCTGGTTGGTATAGCAAGAGAAATGTGATGATATTTGATTTAGGTGGTGGTACTTTAGATGTATCACTACTTACCATAGGTGATGGTGTGTTTCAAGTGAAGGCCACAGCTGGAGACACTCACCTTGGAGGAGAAGACTTTGATAACAAAATGGTGGATTTTTGTGTTGAGCAATTCAAGAAGAAGCATAATGTGGACGTGAGTGGAAACTCTAGGGCACTCAGGAGGTTAAGAAATGCATGTGAGAAAGCAAAGAGGAGGCTTTCATTTACTTCAGCCACTGACATTGAAATCGACTGTTTGTATGAGGGTACTGATTTCTATACAACTATTACCCGTGCCAAATTTGAGCAACTGAATATGGATTTCTTTAACAAGTGTATGGAGCCAGTCCAGCAGTGTTTGAAGGATGCCAATATGGAAGTGAGCAGTGTCCATGATGTTGTTCTTGCCGGTGGATCTTCTAGAATTCCCAAAGTGCAGCAACTATTGCAGGATGTGTTCAAGGGGAAGCAGTTGTGCAAGAGTATCAATCCGGATGAGGCAATTGCGTATGGTGCCGCTGTTCAAGCTGCAGTCTTGAGTGGGAATGTGAATGGGAATCTTCAGGACTTTTCTATCTTGGATGTCACACCTCTGTCACTTGGGGTGGAGGTTACAGAAAATCCTGTCATGAAAGTTGTGATTCCAAGAAACAGCAGGATTCCCATCAAGAGGAACACGACTCTAGTTACTCTCTATGACAATCAAAAGTCGGCGTGGTTCCCCATTTATGAGGGTGAGAGTACAAACACCAAAGAGAATAATTTTCTGGGTGAATTTGTTCTCGAGGGTATTCCTCCAGCTCCAAAGGGTGCTGCTAAATTCGATGTTTGTTTCAGTATTGATGCCAACGGTATTCTAAGTGTCTCTGCTGAGGATAAGTCTACCGGCCAGAGGAAAGGGATTACAATCATGAGTGCTAAAGACATAAGGAACTTTGAAGGGATTGAGTTAGTGAACTGA
Functional Annotation

Protein Analysis

526

Amino Acids

57.5

Weight (kDa)

6.0

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 8 - 515 1e-210 Hsp70 protein
MreB_Mbl PF06723 125 - 379 2.5e-17 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1130
AccI GTMKAC 1 cut(s) 1499
AccIII TCCGGA 1 cut(s) 1108
AciI CCGC 3 cut(s) 303, 391, 1134
AclWI GGATC 1 cut(s) 1039
AcoI YGGCCR 2 cut(s) 275, 1504
AcsI RAATTY 5 cut(s) 363, 917, 1041, 1391, 1436
AcuI CTGAAG 2 cut(s) 831, 1163
AfaI GTAC 4 cut(s) 50, 625, 886, 1360
AfiI CCNNNNNNNGG 2 cut(s) 1287, 1509
AjiI CACGTC 1 cut(s) 772
AjnI CCWGG 2 cut(s) 177, 298
AleI CACNNNNGTG 1 cut(s) 78
AluBI AGCT 4 cut(s) 271, 683, 1145, 1418
AluI AGCT 4 cut(s) 271, 683, 1145, 1418
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 3 cut(s) 137, 681, 1486
AlwI GGATC 1 cut(s) 1039
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 1400
Aor13HI TCCGGA 1 cut(s) 1108
AoxI GGCC 6 cut(s) 16, 275, 405, 505, 675, 1504
ApeKI GCWGC 6 cut(s) 353, 542, 545, 1054, 1145, 1430
ApoI RAATTY 5 cut(s) 363, 917, 1041, 1391, 1436
Asp700I GAANNNNTTC 1 cut(s) 1395
AspS9I GGNCC 2 cut(s) 114, 296
AsuHPI GGTGA 6 cut(s) 173, 316, 665, 686, 1364, 1400
AvaI CYCGRG 1 cut(s) 1400
AvaII GGWCC 2 cut(s) 114, 296
BaeGI GKGCMC 1 cut(s) 793
BalI TGGCCA 1 cut(s) 277
BanI GGYRCC 1 cut(s) 1130
BauI CACGAG 1 cut(s) 52
BbsI GAAGAC 1 cut(s) 714
Bbv12I GWGCWC 1 cut(s) 75
BbvCI CCTCAGC 2 cut(s) 402, 1488
BbvI GCAGC 6 cut(s) 340, 529, 557, 1066, 1132, 1417
BccI CCATC 4 cut(s) 130, 179, 650, 1289
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 2 cut(s) 179, 300
BcoDI GTCTC 3 cut(s) 137, 681, 1486
BfaI CTAG 4 cut(s) 380, 786, 1038, 1301
BfmI CTRYAG 2 cut(s) 543, 1146
BisI GCNGC 8 cut(s) 304, 354, 543, 546, 1055, 1134, 1146, 1431
BlsI GCNGC 8 cut(s) 305, 355, 544, 547, 1056, 1135, 1147, 1432
Bme1390I CCNGG 2 cut(s) 179, 300
Bme18I GGWCC 2 cut(s) 114, 296
BmeT110I CYCGRG 1 cut(s) 1400
BmgBI CACGTC 1 cut(s) 772
BmgT120I GGNCC 2 cut(s) 114, 296
BmiI GGNNCC 4 cut(s) 191, 960, 1132, 1337
BmrFI CCNGG 2 cut(s) 179, 300
BmsI GCATC 5 cut(s) 202, 235, 507, 973, 1450
BpiI GAAGAC 1 cut(s) 714
BpmI CTGGAG 2 cut(s) 705, 1398
Bpu10I CCTNAGC 2 cut(s) 402, 1488
BpuEI CTTGAG 1 cut(s) 1174
BsaBI GATNNNNATC 3 cut(s) 521, 1280, 1523
BsaJI CCNNGG 2 cut(s) 372, 697
BsaWI WCCGGW 1 cut(s) 1108
Bsc4I CCNNNNNNNGG 2 cut(s) 1287, 1509
Bse118I RCCGGY 2 cut(s) 1025, 1502
Bse1I ACTGG 1 cut(s) 962
Bse3DI GCAATG 1 cut(s) 498
Bse8I GATNNNNATC 3 cut(s) 521, 1280, 1523
BseAI TCCGGA 1 cut(s) 1108
BseBI CCWGG 2 cut(s) 179, 300
BseDI CCNNGG 2 cut(s) 372, 697
BseGI GGATG 4 cut(s) 988, 1075, 1117, 1204
BseJI GATNNNNATC 3 cut(s) 521, 1280, 1523
BseLI CCNNNNNNNGG 2 cut(s) 1287, 1509
BseMI GCAATG 1 cut(s) 498
BseMII CTCAG 5 cut(s) 132, 138, 393, 808, 1479
BseNI ACTGG 1 cut(s) 962
BseRI GAGGAG 2 cut(s) 717, 844
BseSI GKGCMC 1 cut(s) 793
BseXI GCAGC 6 cut(s) 340, 529, 557, 1066, 1132, 1417
BsgI GTGCAG 1 cut(s) 1073
Bsh1285I CGRYCG 1 cut(s) 79
BshFI GGCC 6 cut(s) 18, 277, 407, 507, 677, 1506
BshNI GGYRCC 1 cut(s) 1130
BsiEI CGRYCG 1 cut(s) 79
BsiHKAI GWGCWC 1 cut(s) 75
BsiHKCI CYCGRG 1 cut(s) 1400
BsiSI CCGG 3 cut(s) 1026, 1109, 1503
BslFI GGGAC 2 cut(s) 55, 431
BslI CCNNNNNNNGG 2 cut(s) 1287, 1509
BsmAI GTCTC 3 cut(s) 137, 681, 1486
BsmFI GGGAC 2 cut(s) 55, 431
BsmI GAATGC 1 cut(s) 436
BsnI GGCC 6 cut(s) 18, 277, 407, 507, 677, 1506
BsoBI CYCGRG 1 cut(s) 1400
Bsp1286I GDGCHC 2 cut(s) 75, 793
Bsp13I TCCGGA 1 cut(s) 1108
Bsp143I GATC 3 cut(s) 34, 100, 1031
Bsp19I CCATGG 1 cut(s) 372
BspACI CCGC 3 cut(s) 303, 391, 1134
BspANI GGCC 6 cut(s) 18, 277, 407, 507, 677, 1506
BspCNI CTCAG 5 cut(s) 133, 139, 394, 807, 1480
BspEI TCCGGA 1 cut(s) 1108
BspHI TCATGA 2 cut(s) 1245, 1527
BspLI GGNNCC 4 cut(s) 191, 960, 1132, 1337
BspMAI CTGCAG 2 cut(s) 547, 1150
BspPI GGATC 1 cut(s) 1039
BspT107I GGYRCC 1 cut(s) 1130
BsrDI GCAATG 1 cut(s) 498
BsrFI RCCGGY 2 cut(s) 1025, 1502
BsrI ACTGG 1 cut(s) 962
BssAI RCCGGY 2 cut(s) 1025, 1502
BssECI CCNNGG 2 cut(s) 372, 697
BssMI GATC 3 cut(s) 34, 100, 1031
BssSI CACGAG 1 cut(s) 52
BssT1I CCWWGG 2 cut(s) 372, 697
Bst2BI CACGAG 1 cut(s) 52
Bst2UI CCWGG 2 cut(s) 179, 300
Bst4CI ACNGT 7 cut(s) 80, 253, 348, 424, 445, 872, 1469
BstAPI GCANNNNNTGC 2 cut(s) 551, 1063
BstC8I GCNNGC 2 cut(s) 308, 505
BstDEI CTNAG 6 cut(s) 141, 147, 402, 794, 1475, 1488
BstDSI CCRYGG 1 cut(s) 372
BstEII GGTNACC 1 cut(s) 322
BstF5I GGATG 4 cut(s) 988, 1075, 1117, 1204
BstKTI GATC 3 cut(s) 37, 103, 1034
BstMAI GTCTC 3 cut(s) 137, 681, 1486
BstMBI GATC 3 cut(s) 34, 100, 1031
BstMCI CGRYCG 1 cut(s) 79
BstMWI GCNNNNNNNGC 6 cut(s) 504, 551, 967, 1063, 1130, 1142
BstNI CCWGG 2 cut(s) 179, 300
BstNSI RCATGY 2 cut(s) 491, 816
BstPI GGTNACC 1 cut(s) 322
BstSCI CCNGG 2 cut(s) 177, 298
BstSFI CTRYAG 2 cut(s) 543, 1146
BstSLI GKGCMC 1 cut(s) 793
BstV1I GCAGC 6 cut(s) 340, 529, 557, 1066, 1132, 1417
BstV2I GAAGAC 1 cut(s) 714
BstX2I RGATCY 1 cut(s) 1031
BstYI RGATCY 1 cut(s) 1031
BsuRI GGCC 6 cut(s) 18, 277, 407, 507, 677, 1506
BtgI CCRYGG 1 cut(s) 372
BtrI CACGTC 1 cut(s) 772
BtsCI GGATG 4 cut(s) 988, 1075, 1117, 1204
BtsI GCAGTG 3 cut(s) 69, 977, 1009
BtsIMutI CAGTG 8 cut(s) 69, 138, 249, 420, 441, 852, 977, 1009
Cac8I GCNNGC 2 cut(s) 308, 505
CaiI CAGNNNCTG 1 cut(s) 854
CciI TCATGA 2 cut(s) 1245, 1527
Cfr10I RCCGGY 2 cut(s) 1025, 1502
Cfr13I GGNCC 2 cut(s) 114, 296
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 4 cut(s) 49, 624, 885, 1359
CspCI CAANNNNNGTGG 2 cut(s) 841, 876
CviAII CATG 7 cut(s) 329, 373, 488, 813, 1010, 1246, 1528
CviQI GTAC 4 cut(s) 49, 624, 885, 1359
DdeI CTNAG 6 cut(s) 141, 147, 402, 794, 1475, 1488
DpnI GATC 3 cut(s) 36, 102, 1033
DpnII GATC 3 cut(s) 34, 100, 1031
DraI TTTAAA 1 cut(s) 283
EaeI YGGCCR 2 cut(s) 275, 1504
Eco130I CCWWGG 2 cut(s) 372, 697
Eco147I AGGCCT 1 cut(s) 407
Eco47I GGWCC 2 cut(s) 114, 296
Eco57I CTGAAG 2 cut(s) 831, 1163
Eco88I CYCGRG 1 cut(s) 1400
Eco91I GGTNACC 1 cut(s) 322
EcoO109I RGGNCCY 1 cut(s) 296
EcoO65I GGTNACC 1 cut(s) 322
EcoRI GAATTC 1 cut(s) 1041
EcoRII CCWGG 2 cut(s) 177, 298
EcoT14I CCWWGG 2 cut(s) 372, 697
EcoT22I ATGCAT 2 cut(s) 522, 814
ErhI CCWWGG 2 cut(s) 372, 697
FaeI CATG 7 cut(s) 332, 376, 491, 816, 1013, 1249, 1531
FaqI GGGAC 2 cut(s) 55, 431
FatI CATG 7 cut(s) 328, 372, 487, 812, 1009, 1245, 1527
FauI CCCGC 1 cut(s) 384
FblI GTMKAC 1 cut(s) 1499
Fnu4HI GCNGC 8 cut(s) 304, 354, 543, 546, 1055, 1134, 1146, 1431
FokI GGATG 4 cut(s) 995, 1082, 1124, 1211
Fsp4HI GCNGC 8 cut(s) 304, 354, 543, 546, 1055, 1134, 1146, 1431
FspBI CTAG 4 cut(s) 380, 786, 1038, 1301
GluI GCNGC 8 cut(s) 304, 354, 543, 546, 1055, 1134, 1146, 1431
GsuI CTGGAG 2 cut(s) 705, 1398
HaeIII GGCC 6 cut(s) 18, 277, 407, 507, 677, 1506
HapII CCGG 3 cut(s) 1026, 1109, 1503
Hin1II CATG 7 cut(s) 332, 376, 491, 816, 1013, 1249, 1531
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 7 cut(s) 164, 237, 464, 1174, 1258, 1276, 1297
HpaII CCGG 3 cut(s) 1026, 1109, 1503
HphI GGTGA 6 cut(s) 173, 316, 665, 686, 1364, 1400
Hpy166II GTNNAC 4 cut(s) 97, 769, 1500, 1573
Hpy8I GTNNAC 4 cut(s) 97, 769, 1500, 1573
HpyAV CCTTC 6 cut(s) 8, 145, 565, 667, 973, 1550
HpyCH4III ACNGT 7 cut(s) 80, 253, 348, 424, 445, 872, 1469
HpyCH4IV ACGT 3 cut(s) 47, 472, 771
HpyCH4V TGCA 9 cut(s) 215, 434, 520, 545, 812, 1054, 1066, 1095, 1148
HpyF10VI GCNNNNNNNGC 6 cut(s) 504, 551, 967, 1063, 1130, 1142
HpyF3I CTNAG 6 cut(s) 141, 147, 402, 794, 1475, 1488
HpySE526I ACGT 3 cut(s) 47, 472, 771
Hsp92II CATG 7 cut(s) 332, 376, 491, 816, 1013, 1249, 1531
Kpn2I TCCGGA 1 cut(s) 1108
Kzo9I GATC 3 cut(s) 34, 100, 1031
LmnI GCTCC 3 cut(s) 70, 958, 1423
Lsp1109I GCAGC 6 cut(s) 340, 529, 557, 1066, 1132, 1417
LweI GCATC 5 cut(s) 202, 235, 507, 973, 1450
MabI ACCWGGT 1 cut(s) 177
MaeI CTAG 4 cut(s) 380, 786, 1038, 1301
MaeII ACGT 3 cut(s) 47, 472, 771
MaeIII GTNAC 6 cut(s) 107, 322, 1201, 1212, 1228, 1303
MalI GATC 3 cut(s) 36, 102, 1033
MboI GATC 3 cut(s) 34, 100, 1031
MboII GAAGA 6 cut(s) 23, 371, 719, 766, 1026, 1169
MfeI CAATTG 1 cut(s) 1119
MflI RGATCY 1 cut(s) 1031
MhlI GDGCHC 2 cut(s) 75, 793
MlsI TGGCCA 1 cut(s) 277
MluNI TGGCCA 1 cut(s) 277
MlyI GAGTC 1 cut(s) 1291
Mox20I TGGCCA 1 cut(s) 277
Mph1103I ATGCAT 2 cut(s) 522, 814
MroI TCCGGA 1 cut(s) 1108
MroXI GAANNNNTTC 1 cut(s) 1395
MscI TGGCCA 1 cut(s) 277
MseI TTAA 5 cut(s) 224, 282, 291, 803, 945
MslI CAYNNNNRTG 1 cut(s) 78
Msp20I TGGCCA 1 cut(s) 277
MspA1I CMGCKG 2 cut(s) 683, 1136
MspI CCGG 3 cut(s) 1026, 1109, 1503
MspR9I CCNGG 2 cut(s) 179, 300
MunI CAATTG 1 cut(s) 1119
Mva1269I GAATGC 1 cut(s) 436
MvaI CCWGG 2 cut(s) 179, 300
MwoI GCNNNNNNNGC 6 cut(s) 504, 551, 967, 1063, 1130, 1142
NcoI CCATGG 1 cut(s) 372
NdeII GATC 3 cut(s) 34, 100, 1031
NlaIII CATG 7 cut(s) 332, 376, 491, 816, 1013, 1249, 1531
NlaIV GGNNCC 4 cut(s) 191, 960, 1132, 1337
NmuCI GTSAC 3 cut(s) 322, 1201, 1212
NsiI ATGCAT 2 cut(s) 522, 814
NspI RCATGY 2 cut(s) 491, 816
OliI CACNNNNGTG 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1400
PagI TCATGA 2 cut(s) 1245, 1527
PceI AGGCCT 1 cut(s) 407
PctI GAATGC 1 cut(s) 436
PdmI GAANNNNTTC 1 cut(s) 1395
PfeI GAWTC 6 cut(s) 164, 237, 464, 1174, 1258, 1276
PkrI GCNGC 8 cut(s) 305, 355, 544, 547, 1056, 1135, 1147, 1432
PleI GAGTC 1 cut(s) 1291
PpsI GAGTC 1 cut(s) 1291
PpuMI RGGWCCY 1 cut(s) 296
Psp5II RGGWCCY 1 cut(s) 296
Psp6I CCWGG 2 cut(s) 177, 298
PspEI GGTNACC 1 cut(s) 322
PspGI CCWGG 2 cut(s) 177, 298
PspN4I GGNNCC 4 cut(s) 191, 960, 1132, 1337
PspPI GGNCC 2 cut(s) 114, 296
PspPPI RGGWCCY 1 cut(s) 296
PstI CTGCAG 2 cut(s) 547, 1150
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 1031
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 4 cut(s) 50, 625, 886, 1360
RsaNI GTAC 4 cut(s) 49, 624, 885, 1359
RseI CAYNNNNRTG 1 cut(s) 78
SaqAI TTAA 5 cut(s) 224, 282, 291, 803, 945
SatI GCNGC 8 cut(s) 304, 354, 543, 546, 1055, 1134, 1146, 1431
Sau3AI GATC 3 cut(s) 34, 100, 1031
Sau96I GGNCC 2 cut(s) 114, 296
SchI GAGTC 1 cut(s) 1291
ScrFI CCNGG 2 cut(s) 179, 300
SduI GDGCHC 2 cut(s) 75, 793
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 5 cut(s) 202, 235, 507, 973, 1450
SfcI CTRYAG 2 cut(s) 543, 1146
Sfr274I CTCGAG 1 cut(s) 1400
SinI GGWCC 2 cut(s) 114, 296
SlaI CTCGAG 1 cut(s) 1400
SmiMI CAYNNNNRTG 1 cut(s) 78
SmlI CTYRAG 2 cut(s) 1153, 1400
SmoI CTYRAG 2 cut(s) 1153, 1400
SseBI AGGCCT 1 cut(s) 407
SsiI CCGC 3 cut(s) 303, 391, 1134
SspMI CTAG 4 cut(s) 380, 786, 1038, 1301
StuI AGGCCT 1 cut(s) 407
StyD4I CCNGG 2 cut(s) 177, 298
StyI CCWWGG 2 cut(s) 372, 697
TaaI ACNGT 7 cut(s) 80, 253, 348, 424, 445, 872, 1469
TaiI ACGT 3 cut(s) 50, 475, 774
TaqI TCGA 3 cut(s) 867, 1401, 1440
TatI WGTACW 1 cut(s) 1358
TauI GCSGC 2 cut(s) 306, 1136
TfiI GAWTC 6 cut(s) 164, 237, 464, 1174, 1258, 1276
Tru1I TTAA 5 cut(s) 224, 282, 291, 803, 945
Tru9I TTAA 5 cut(s) 224, 282, 291, 803, 945
TscAI CASTG 8 cut(s) 69, 145, 256, 427, 448, 859, 977, 1009
TseFI GTSAC 3 cut(s) 322, 1201, 1212
TseI GCWGC 6 cut(s) 353, 542, 545, 1054, 1145, 1430
Tsp45I GTSAC 3 cut(s) 322, 1201, 1212
TspDTI ATGAA 2 cut(s) 828, 1262
TspGWI ACGGA 1 cut(s) 348
TspRI CASTG 8 cut(s) 69, 145, 256, 427, 448, 859, 977, 1009
VpaK11BI GGWCC 2 cut(s) 114, 296
XapI RAATTY 5 cut(s) 363, 917, 1041, 1391, 1436
XbaI TCTAGA 1 cut(s) 1037
XceI RCATGY 2 cut(s) 491, 816
XhoI CTCGAG 1 cut(s) 1400
XmiI GTMKAC 1 cut(s) 1499
XmnI GAANNNNTTC 1 cut(s) 1395
XspI CTAG 4 cut(s) 380, 786, 1038, 1301
Zsp2I ATGCAT 2 cut(s) 522, 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.