RchiOBHm_Chr6g0252171
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
7341685 .. 7343165
1481 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22608

Sequence Viewer

Length: 876 bp
ATGGCGGGTCGTGCGATAGGGATTGACTTGGGGACAACGTACTCGTGCGTAGCAGTGTGGCAGCATGATCGAGTTGAAATCATAGTGAACGATCAAGGCAACAGAACCACTCCATCTTATGTTGCCTTCACTGATACTAAGCGATTGGTAGGAGATGCGGCACTTAACCAGATCATCAAAAACCCCACCAATACAGTCTTTGTTAGTGATGCATGTGTTCAGAGTGATTTGAAGCTTTGGCCATTCAAGGTCATCGAAGGTCCTAATGACAAGCCCATTATTGTTGTGAAAGACAAAGGCCAAGAGAAACACTTTTCTGCTGAAGAAATATCATCCATGGTACTATCAAAGATGCATAAAGTTGCTGAAGCCTATCTTGGATCAAGTGTAAAAAATGCTGTTATTACTGTCCCTGCTTACTTCAACAACTCACAACGTCACGCTACCAAAAATACTGCTAAAATGGCTGGCCTAAATGTGATTCGTATTATAAATGAACCGACTGCTGCAGCCATTGCTTACGGCCTCGACAAGAAAGCCGGTTGGGAGAGCAAAAGAACTGTTATGATATTTGATTTAGGTGGTGGTACTATAGATGTATCACTACTGGTAATAGGTGATGGCGTCTTTGATGTGATGGCCACCGCTGGAGACACCCACCTTGGAGGTGAAGACTTTGATAACAAAATGGTGAAATATTGTGCCGAGCAATTCAAGAGGAAGCACGATTTGGACGTTAGAGGGAACTCGAGAGCTCTTACGAGGTTGAAAAATGCATGTGAGAAGGCAAAGAGGAGACGGTCATTCACATCTTCAGTTGACATCGATATCGACTGTTTGGATCAAGGTATTGACTTCAATGCAACTATTACTTGA
Functional Annotation

Protein Analysis

291

Amino Acids

31.89

Weight (kDa)

8.18

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 5 - 291 2.7e-115 Hsp70 protein
MreB_Mbl PF06723 113 - 239 1.1e-13 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 491
AciI CCGC 3 cut(s) 5, 158, 645
AclWI GGATC 2 cut(s) 388, 849
AcoI YGGCCR 2 cut(s) 239, 639
AcuI CTGAAG 3 cut(s) 342, 387, 798
AcyI GRCGYC 1 cut(s) 624
AfaI GTAC 3 cut(s) 41, 342, 589
AgsI TTSAA 7 cut(s) 77, 232, 247, 424, 715, 769, 859
AjuI GAANNNNNNNTTGG 4 cut(s) 360, 392, 713, 745
AluBI AGCT 2 cut(s) 235, 755
AluI AGCT 2 cut(s) 235, 755
Alw21I GWGCWC 1 cut(s) 757
Alw26I GTCTC 2 cut(s) 645, 790
AlwI GGATC 2 cut(s) 388, 849
Ama87I CYCGRG 1 cut(s) 748
AoxI GGCC 5 cut(s) 239, 298, 469, 523, 639
ApeKI GCWGC 3 cut(s) 61, 506, 509
AspS9I GGNCC 1 cut(s) 260
AsuHPI GGTGA 3 cut(s) 629, 680, 703
AvaI CYCGRG 1 cut(s) 748
AvaII GGWCC 1 cut(s) 260
BalI TGGCCA 2 cut(s) 241, 641
BanII GRGCYC 1 cut(s) 757
BauI CACGAG 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 678
Bbv12I GWGCWC 1 cut(s) 757
BbvI GCAGC 3 cut(s) 73, 493, 521
BccI CCATC 3 cut(s) 121, 614, 631
BceAI ACGGC 1 cut(s) 538
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BcoDI GTCTC 2 cut(s) 645, 790
BfmI CTRYAG 2 cut(s) 507, 591
BisI GCNGC 4 cut(s) 62, 159, 507, 510
BlsI GCNGC 4 cut(s) 63, 160, 508, 511
Bme18I GGWCC 1 cut(s) 260
BmeT110I CYCGRG 1 cut(s) 748
BmgT120I GGNCC 1 cut(s) 260
BmsI GCATC 3 cut(s) 145, 199, 342
BpiI GAAGAC 1 cut(s) 678
BpmI CTGGAG 1 cut(s) 669
Bsa29I ATCGAT 1 cut(s) 825
BsaHI GRCGYC 1 cut(s) 624
BsaJI CCNNGG 2 cut(s) 336, 661
Bse118I RCCGGY 1 cut(s) 539
Bse1I ACTGG 1 cut(s) 612
Bse3DI GCAATG 1 cut(s) 513
BseCI ATCGAT 1 cut(s) 825
BseDI CCNNGG 2 cut(s) 336, 661
BseGI GGATG 1 cut(s) 332
BseMI GCAATG 1 cut(s) 513
BseNI ACTGG 1 cut(s) 612
BseRI GAGGAG 1 cut(s) 808
BseXI GCAGC 3 cut(s) 73, 493, 521
BshFI GGCC 5 cut(s) 241, 300, 471, 525, 641
BshVI ATCGAT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 757
BsiHKCI CYCGRG 1 cut(s) 748
BsiSI CCGG 1 cut(s) 540
BslFI GGGAC 2 cut(s) 46, 395
BsmAI GTCTC 2 cut(s) 645, 790
BsmBI CGTCTC 1 cut(s) 790
BsmFI GGGAC 2 cut(s) 46, 395
BsnI GGCC 5 cut(s) 241, 300, 471, 525, 641
BsoBI CYCGRG 1 cut(s) 748
Bsp1286I GDGCHC 1 cut(s) 757
Bsp143I GATC 5 cut(s) 67, 91, 171, 380, 841
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 3 cut(s) 5, 158, 645
BspANI GGCC 5 cut(s) 241, 300, 471, 525, 641
BspDI ATCGAT 1 cut(s) 825
BspMAI CTGCAG 1 cut(s) 511
BspPI GGATC 2 cut(s) 388, 849
BsrDI GCAATG 1 cut(s) 513
BsrFI RCCGGY 1 cut(s) 539
BsrI ACTGG 1 cut(s) 612
BssAI RCCGGY 1 cut(s) 539
BssECI CCNNGG 2 cut(s) 336, 661
BssMI GATC 5 cut(s) 67, 91, 171, 380, 841
BssNI GRCGYC 1 cut(s) 624
BssSI CACGAG 1 cut(s) 43
BssT1I CCWWGG 2 cut(s) 336, 661
Bst2BI CACGAG 1 cut(s) 43
Bst4CI ACNGT 5 cut(s) 196, 409, 562, 801, 836
BstACI GRCGYC 1 cut(s) 624
BstAPI GCANNNNNTGC 1 cut(s) 515
BstC8I GCNNGC 1 cut(s) 469
BstDEI CTNAG 1 cut(s) 138
BstDSI CCRYGG 1 cut(s) 336
BstF5I GGATG 1 cut(s) 332
BstKTI GATC 5 cut(s) 70, 94, 174, 383, 844
BstMAI GTCTC 2 cut(s) 645, 790
BstMBI GATC 5 cut(s) 67, 91, 171, 380, 841
BstMWI GCNNNNNNNGC 3 cut(s) 11, 464, 515
BstNSI RCATGY 2 cut(s) 216, 780
BstSFI CTRYAG 2 cut(s) 507, 591
BstV1I GCAGC 3 cut(s) 73, 493, 521
BstV2I GAAGAC 1 cut(s) 678
Bsu15I ATCGAT 1 cut(s) 825
BsuRI GGCC 5 cut(s) 241, 300, 471, 525, 641
BsuTUI ATCGAT 1 cut(s) 825
BtgI CCRYGG 1 cut(s) 336
BtsCI GGATG 1 cut(s) 332
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 2 cut(s) 60, 129
Cac8I GCNNGC 1 cut(s) 469
Cfr10I RCCGGY 1 cut(s) 539
Cfr13I GGNCC 1 cut(s) 260
ClaI ATCGAT 1 cut(s) 825
CseI GACGC 1 cut(s) 613
Csp6I GTAC 3 cut(s) 40, 341, 588
CviAII CATG 4 cut(s) 65, 213, 337, 777
CviQI GTAC 3 cut(s) 40, 341, 588
DdeI CTNAG 1 cut(s) 138
DpnI GATC 5 cut(s) 69, 93, 173, 382, 843
DpnII GATC 5 cut(s) 67, 91, 171, 380, 841
EaeI YGGCCR 2 cut(s) 239, 639
Ecl136II GAGCTC 1 cut(s) 755
Eco130I CCWWGG 2 cut(s) 336, 661
Eco24I GRGCYC 1 cut(s) 757
Eco32I GATATC 1 cut(s) 829
Eco47I GGWCC 1 cut(s) 260
Eco53kI GAGCTC 1 cut(s) 755
Eco57I CTGAAG 3 cut(s) 342, 387, 798
Eco88I CYCGRG 1 cut(s) 748
EcoICRI GAGCTC 1 cut(s) 755
EcoO109I RGGNCCY 1 cut(s) 260
EcoRV GATATC 1 cut(s) 829
EcoT14I CCWWGG 2 cut(s) 336, 661
EcoT22I ATGCAT 3 cut(s) 214, 357, 778
EcoT38I GRGCYC 1 cut(s) 757
ErhI CCWWGG 2 cut(s) 336, 661
Esp3I CGTCTC 1 cut(s) 790
FaeI CATG 4 cut(s) 68, 216, 340, 780
FalI AAGNNNNNCTT 2 cut(s) 360, 392
FaqI GGGAC 2 cut(s) 46, 395
FatI CATG 4 cut(s) 64, 212, 336, 776
Fnu4HI GCNGC 4 cut(s) 62, 159, 507, 510
FokI GGATG 1 cut(s) 319
FriOI GRGCYC 1 cut(s) 757
Fsp4HI GCNGC 4 cut(s) 62, 159, 507, 510
GluI GCNGC 4 cut(s) 62, 159, 507, 510
GsuI CTGGAG 1 cut(s) 669
HaeIII GGCC 5 cut(s) 241, 300, 471, 525, 641
HapII CCGG 1 cut(s) 540
HgaI GACGC 1 cut(s) 613
Hin1I GRCGYC 1 cut(s) 624
Hin1II CATG 4 cut(s) 68, 216, 340, 780
HincII GTYRAC 1 cut(s) 820
HindII GTYRAC 1 cut(s) 820
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 1 cut(s) 481
HpaII CCGG 1 cut(s) 540
HphI GGTGA 3 cut(s) 629, 680, 703
Hpy166II GTNNAC 2 cut(s) 88, 820
Hpy188I TCNGA 1 cut(s) 222
Hpy188III TCNNGA 2 cut(s) 715, 750
Hpy8I GTNNAC 2 cut(s) 88, 820
HpyAV CCTTC 3 cut(s) 136, 251, 778
HpyCH4III ACNGT 5 cut(s) 196, 409, 562, 801, 836
HpyCH4IV ACGT 3 cut(s) 38, 436, 735
HpyCH4V TGCA 5 cut(s) 212, 355, 509, 776, 863
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 464, 515
HpyF3I CTNAG 1 cut(s) 138
HpySE526I ACGT 3 cut(s) 38, 436, 735
Hsp92I GRCGYC 1 cut(s) 624
Hsp92II CATG 4 cut(s) 68, 216, 340, 780
Kzo9I GATC 5 cut(s) 67, 91, 171, 380, 841
LpnPI CCDG 6 cut(s) 182, 426, 453, 553, 593, 633
Lsp1109I GCAGC 3 cut(s) 73, 493, 521
LweI GCATC 3 cut(s) 145, 199, 342
MaeII ACGT 3 cut(s) 38, 436, 735
MaeIII GTNAC 1 cut(s) 437
MalI GATC 5 cut(s) 69, 93, 173, 382, 843
MboI GATC 5 cut(s) 67, 91, 171, 380, 841
MboII GAAGA 3 cut(s) 335, 683, 804
MhlI GDGCHC 1 cut(s) 757
MlsI TGGCCA 2 cut(s) 241, 641
MluCI AATT 1 cut(s) 710
MluNI TGGCCA 2 cut(s) 241, 641
MnlI CCTC 6 cut(s) 536, 659, 711, 734, 756, 786
Mox20I TGGCCA 2 cut(s) 241, 641
Mph1103I ATGCAT 3 cut(s) 214, 357, 778
MscI TGGCCA 2 cut(s) 241, 641
MseI TTAA 1 cut(s) 165
Msp20I TGGCCA 2 cut(s) 241, 641
MspA1I CMGCKG 1 cut(s) 647
MspI CCGG 1 cut(s) 540
MwoI GCNNNNNNNGC 3 cut(s) 11, 464, 515
NcoI CCATGG 1 cut(s) 336
NdeII GATC 5 cut(s) 67, 91, 171, 380, 841
NlaIII CATG 4 cut(s) 68, 216, 340, 780
NmeAIII GCCGAG 1 cut(s) 730
NmuCI GTSAC 1 cut(s) 437
NsiI ATGCAT 3 cut(s) 214, 357, 778
NspI RCATGY 2 cut(s) 216, 780
PaeR7I CTCGAG 1 cut(s) 748
PcsI WCGNNNNNNNCGW 1 cut(s) 732
PfeI GAWTC 1 cut(s) 481
PkrI GCNGC 4 cut(s) 63, 160, 508, 511
PpuMI RGGWCCY 1 cut(s) 260
PsiI TTATAA 1 cut(s) 491
Psp124BI GAGCTC 1 cut(s) 757
Psp5II RGGWCCY 1 cut(s) 260
PspPI GGNCC 1 cut(s) 260
PspPPI RGGWCCY 1 cut(s) 260
PstI CTGCAG 1 cut(s) 511
RsaI GTAC 3 cut(s) 41, 342, 589
RsaNI GTAC 3 cut(s) 40, 341, 588
SacI GAGCTC 1 cut(s) 757
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 4 cut(s) 62, 159, 507, 510
Sau3AI GATC 5 cut(s) 67, 91, 171, 380, 841
Sau96I GGNCC 1 cut(s) 260
SduI GDGCHC 1 cut(s) 757
SfaNI GCATC 3 cut(s) 145, 199, 342
SfcI CTRYAG 2 cut(s) 507, 591
Sfr274I CTCGAG 1 cut(s) 748
SinI GGWCC 1 cut(s) 260
SlaI CTCGAG 1 cut(s) 748
SmlI CTYRAG 1 cut(s) 748
SmoI CTYRAG 1 cut(s) 748
Sse9I AATT 1 cut(s) 710
SsiI CCGC 3 cut(s) 5, 158, 645
SspI AATATT 1 cut(s) 698
SstI GAGCTC 1 cut(s) 757
StyI CCWWGG 2 cut(s) 336, 661
TaaI ACNGT 5 cut(s) 196, 409, 562, 801, 836
TaiI ACGT 3 cut(s) 41, 439, 738
TaqI TCGA 6 cut(s) 70, 255, 528, 749, 825, 831
TasI AATT 1 cut(s) 710
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 1 cut(s) 481
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TscAI CASTG 2 cut(s) 60, 136
TseFI GTSAC 1 cut(s) 437
TseI GCWGC 3 cut(s) 61, 506, 509
Tsp45I GTSAC 1 cut(s) 437
TspDTI ATGAA 1 cut(s) 510
TspRI CASTG 2 cut(s) 60, 136
VpaK11BI GGWCC 1 cut(s) 260
XceI RCATGY 2 cut(s) 216, 780
XhoI CTCGAG 1 cut(s) 748
Zsp2I ATGCAT 3 cut(s) 214, 357, 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.