Rw1G030120
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
57884094 .. 57889352
5259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G030120.1

Sequence Viewer

Length: 1581 bp
ATGGGGGGAGGAGGAGAAGGAGGAGAGGGTCATGCAATAGGGATTGACTTAGGGACAACCTATTCATGCGTAGCAGTATGGGAGCACGATCATGTAGAAATCATAGTGAATGATCAGGGAAACAGGACAACTCCATCTTATGTTGCCTTCACTGACTCAGAGCTATTCGTAGGCGACGCTGCATTTAACCAGATCATTAAAAATCCCACAAACTCAATCTTTGATGCAAAGCGTTTAATAGGCAGGAGATATAGTGACGCCTCAGTTCAAAATGATCTTAAACTCTGGCCATTCAAGGTTACTGAAGGTCCTGCTGAGAAGCCCATAATTGTAGTTACCCACAAGGGCGAAGAGAAGCAGTTTTCTGCTGAAGAAATCTCATCTATGGTTCTTGCAAAGATGCGGGAAATTGCTGAGGCTTATCTTGGTTCACCTGTGAAAAATGCAGTTATCACCGTCCCTGCCTACTTCAATAATTCACAGCGTCAGGCTACAAATGATGCCGCAGTCATTGCTGGCCTAAACGTGATGCGTATCATCAACGAACCAACTGCAGCAGCCATTGCTTATGGACTTGACAGAAAGGGCGGCTGGTATAGCAAGAGAAATGTTATGATATTTGATTTCGGCGGTGGTACACTAGATGTGTCATTGCTTACAATAGGTGATGGTATATTCGAAGTGAAGGCTACAGCTGGAGACACTCACCTTGGAGGTGAAGATCTTGATAACAGAATGGTGAGCTATTGTGTTGAGGAATTCAAGAAAAAGCACAATCTAGACATCACTGGAAACTCTAGAACTCTTAGGAGGTTAAGAAATGCATGTGAGAAGGCAAAGAGGAGACTTTCATTTGCGTCTATAGTTGACATTGAAATTGATTGTTTGGATTTCTATACTACTATCACTCGAGCCAAGTTTGAACAACTCAACAAAGACTTGTTCAACAAGTGCATGGACCCTGTGAGAAAGTGTTTAAGCGATGCTAAAATGAAGATAAGCAATGTCCATGATGTTGTTCTTGCGGGTGGCTCTTCTAGAATTCCCAAAGTGCAGGAACTATTAAAAGATGTCTTCAAAGGGAAGGAGCTGTGCAAGGGAGTTAATCCAGATGAGGCAATCGCCTATGGAGCTGCTGTTCAAGCTGCAGTTTTGAAAGGGCATCAAGATCGGAAACTTCAAGACTTCGCTCTCTTGGATGTCACCCCTCTGTCACTTGGGTTGGAGAGTACCAAACTTGATAGGCTCGAGAAATACATGAATGTTGTGATTCCAAAGAACACGAGAATACCTGTGATGAAGAGAACAAAAATAACTACTATTTATGACAACCAACGGTCGATCGAATTCCCCATATATGAGGGTGAGAGTAGAGTAGCCAAAGAGAATAACTTTTTGGGCGAATTTAGCCTCTTCGACATTCCTCTGGCTCCCAAGCATGTTCCTAGGTTCAATGTTTGCTTTGATATTGACGCAAGTGGTATCCTGCGTGTCTCAGCAGAGGACATGGCTACTGGGCAGAGAAAAGAGATTACGATCAACAGTGACAGAAGAAATTTGGGAATTGAGAACTTGACTTAA
Functional Annotation

Protein Analysis

526

Amino Acids

58.27

Weight (kDa)

6.55

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 12 - 517 5.4e-201 Hsp70 protein
MreB_Mbl PF06723 145 - 380 6e-15 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 403, 504, 588, 630, 1025
AcoI YGGCCR 1 cut(s) 287
AcsI RAATTY 5 cut(s) 758, 1041, 1346, 1403, 1555
AcuI CTGAAG 2 cut(s) 324, 390
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 2 cut(s) 637, 1231
AjuI GAANNNNNNNTTGG 2 cut(s) 1379, 1411
AloI GAACNNNNNNTCC 2 cut(s) 1122, 1154
AluBI AGCT 6 cut(s) 163, 695, 744, 1090, 1133, 1145
AluI AGCT 6 cut(s) 163, 695, 744, 1090, 1133, 1145
Alw21I GWGCWC 1 cut(s) 87
Alw26I GTCTC 3 cut(s) 693, 838, 1498
Ama87I CYCGRG 2 cut(s) 909, 1247
AoxI GGCC 2 cut(s) 287, 517
ApeKI GCWGC 5 cut(s) 179, 554, 557, 1133, 1145
ApoI RAATTY 5 cut(s) 758, 1041, 1346, 1403, 1555
AspA2I CCTAGG 1 cut(s) 1445
AspS9I GGNCC 2 cut(s) 308, 958
AsuHPI GGTGA 8 cut(s) 423, 445, 677, 698, 728, 751, 1195, 1376
AsuII TTCGAA 1 cut(s) 678
AvaI CYCGRG 2 cut(s) 909, 1247
AvaII GGWCC 2 cut(s) 308, 958
AvrII CCTAGG 1 cut(s) 1445
BalI TGGCCA 1 cut(s) 289
BauI CACGAG 1 cut(s) 1282
BbsI GAAGAC 1 cut(s) 1066
Bbv12I GWGCWC 1 cut(s) 87
BbvCI CCTCAGC 1 cut(s) 414
BbvI GCAGC 5 cut(s) 166, 566, 569, 1120, 1132
BccI CCATC 2 cut(s) 142, 662
BcgI CGANNNNNNTGC 4 cut(s) 533, 567, 1151, 1185
BciVI GTATCC 1 cut(s) 1493
BclI TGATCA 1 cut(s) 112
BcoDI GTCTC 3 cut(s) 693, 838, 1498
BfaI CTAG 5 cut(s) 641, 779, 798, 1038, 1446
BfmI CTRYAG 4 cut(s) 552, 690, 861, 1146
BfuI GTATCC 1 cut(s) 1493
BglII AGATCT 1 cut(s) 721
BisI GCNGC 7 cut(s) 180, 504, 555, 558, 589, 1134, 1146
BlnI CCTAGG 1 cut(s) 1445
BlsI GCNGC 7 cut(s) 181, 505, 556, 559, 590, 1135, 1147
Bme18I GGWCC 2 cut(s) 308, 958
BmeT110I CYCGRG 2 cut(s) 909, 1247
BmgT120I GGNCC 2 cut(s) 308, 958
BmiI GGNNCC 2 cut(s) 960, 1431
BmrI ACTGGG 1 cut(s) 1524
BmsI GCATC 6 cut(s) 214, 390, 490, 519, 973, 1171
BmuI ACTGGG 1 cut(s) 1524
BpiI GAAGAC 1 cut(s) 1066
BpmI CTGGAG 1 cut(s) 717
Bpu10I CCTNAGC 1 cut(s) 414
Bpu14I TTCGAA 1 cut(s) 678
BsaBI GATNNNNATC 2 cut(s) 533, 1535
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 2 cut(s) 709, 1445
BsaXI ACNNNNNCTCC 4 cut(s) 238, 268, 1122, 1152
Bse1I ACTGG 2 cut(s) 793, 1519
Bse3DI GCAATG 4 cut(s) 510, 561, 650, 1009
Bse8I GATNNNNATC 2 cut(s) 533, 1535
BseDI CCNNGG 2 cut(s) 709, 1445
BseGI GGATG 1 cut(s) 1204
BseJI GATNNNNATC 2 cut(s) 533, 1535
BseMI GCAATG 4 cut(s) 510, 561, 650, 1009
BseMII CTCAG 5 cut(s) 171, 276, 306, 405, 1509
BseNI ACTGG 2 cut(s) 793, 1519
BseRI GAGGAG 4 cut(s) 24, 27, 36, 856
BseXI GCAGC 5 cut(s) 166, 566, 569, 1120, 1132
BsgI GTGCAG 1 cut(s) 1073
Bsh1285I CGRYCG 2 cut(s) 1340, 1344
BshFI GGCC 2 cut(s) 289, 519
BsiEI CGRYCG 2 cut(s) 1340, 1344
BsiHKAI GWGCWC 1 cut(s) 87
BsiHKCI CYCGRG 2 cut(s) 909, 1247
BslFI GGGAC 2 cut(s) 67, 443
BsmAI GTCTC 3 cut(s) 693, 838, 1498
BsmFI GGGAC 2 cut(s) 67, 443
BsnI GGCC 2 cut(s) 289, 519
BsoBI CYCGRG 2 cut(s) 909, 1247
Bsp119I TTCGAA 1 cut(s) 678
Bsp1286I GDGCHC 1 cut(s) 87
Bsp143I GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
BspACI CCGC 5 cut(s) 403, 504, 588, 630, 1025
BspANI GGCC 2 cut(s) 289, 519
BspCNI CTCAG 5 cut(s) 170, 275, 307, 406, 1508
BspLI GGNNCC 2 cut(s) 960, 1431
BspMAI CTGCAG 2 cut(s) 556, 1150
BspQI GCTCTTC 1 cut(s) 1039
BspT104I TTCGAA 1 cut(s) 678
BsrDI GCAATG 4 cut(s) 510, 561, 650, 1009
BsrI ACTGG 2 cut(s) 793, 1519
BssECI CCNNGG 2 cut(s) 709, 1445
BssMI GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
BssNI GRCGYC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 1282
BssT1I CCWWGG 2 cut(s) 709, 1445
Bst2BI CACGAG 1 cut(s) 1282
Bst4CI ACNGT 3 cut(s) 457, 1338, 1544
Bst6I CTCTTC 4 cut(s) 345, 1039, 1295, 1418
BstACI GRCGYC 1 cut(s) 258
BstAPI GCANNNNNTGC 2 cut(s) 512, 563
BstBI TTCGAA 1 cut(s) 678
BstC8I GCNNGC 1 cut(s) 517
BstDEI CTNAG 7 cut(s) 49, 157, 262, 315, 414, 806, 1495
BstF5I GGATG 1 cut(s) 1204
BstKTI GATC 8 cut(s) 91, 115, 195, 277, 724, 1171, 1344, 1539
BstMAI GTCTC 3 cut(s) 693, 838, 1498
BstMBI GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
BstMCI CGRYCG 2 cut(s) 1340, 1344
BstMWI GCNNNNNNNGC 6 cut(s) 512, 563, 597, 1130, 1142, 1407
BstNSI RCATGY 2 cut(s) 828, 1442
BstSFI CTRYAG 4 cut(s) 552, 690, 861, 1146
BstV1I GCAGC 5 cut(s) 166, 566, 569, 1120, 1132
BstV2I GAAGAC 1 cut(s) 1066
BstX2I RGATCY 1 cut(s) 721
BstYI RGATCY 1 cut(s) 721
BsuI GTATCC 1 cut(s) 1493
BsuRI GGCC 2 cut(s) 289, 519
BtgZI GCGATG 1 cut(s) 996
BtsCI GGATG 1 cut(s) 1204
BtsIMutI CAGTG 3 cut(s) 150, 786, 1549
Cac8I GCNNGC 1 cut(s) 517
Cfr13I GGNCC 2 cut(s) 308, 958
CseI GACGC 5 cut(s) 185, 266, 473, 846, 1481
Csp6I GTAC 2 cut(s) 636, 1230
CviAII CATG 9 cut(s) 32, 66, 92, 825, 955, 1010, 1258, 1439, 1507
CviQI GTAC 2 cut(s) 636, 1230
DdeI CTNAG 7 cut(s) 49, 157, 262, 315, 414, 806, 1495
DpnI GATC 8 cut(s) 90, 114, 194, 276, 723, 1170, 1343, 1538
DpnII GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
EaeI YGGCCR 1 cut(s) 287
Eam1104I CTCTTC 4 cut(s) 345, 1039, 1295, 1418
EarI CTCTTC 4 cut(s) 345, 1039, 1295, 1418
Eco130I CCWWGG 2 cut(s) 709, 1445
Eco47I GGWCC 2 cut(s) 308, 958
Eco57I CTGAAG 2 cut(s) 324, 390
Eco88I CYCGRG 2 cut(s) 909, 1247
EcoO109I RGGNCCY 1 cut(s) 308
EcoRI GAATTC 3 cut(s) 758, 1041, 1346
EcoT14I CCWWGG 2 cut(s) 709, 1445
EcoT22I ATGCAT 1 cut(s) 826
ErhI CCWWGG 2 cut(s) 709, 1445
FaeI CATG 9 cut(s) 35, 69, 95, 828, 958, 1013, 1261, 1442, 1510
FaqI GGGAC 2 cut(s) 67, 443
FatI CATG 9 cut(s) 31, 65, 91, 824, 954, 1009, 1257, 1438, 1506
FauI CCCGC 2 cut(s) 396, 1018
FbaI TGATCA 1 cut(s) 112
Fnu4HI GCNGC 7 cut(s) 180, 504, 555, 558, 589, 1134, 1146
FokI GGATG 1 cut(s) 1211
Fsp4HI GCNGC 7 cut(s) 180, 504, 555, 558, 589, 1134, 1146
FspBI CTAG 5 cut(s) 641, 779, 798, 1038, 1446
GluI GCNGC 7 cut(s) 180, 504, 555, 558, 589, 1134, 1146
GsuI CTGGAG 1 cut(s) 717
HaeIII GGCC 2 cut(s) 289, 519
HgaI GACGC 5 cut(s) 185, 266, 473, 846, 1481
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 9 cut(s) 35, 69, 95, 828, 958, 1013, 1261, 1442, 1510
HincII GTYRAC 1 cut(s) 868
HindII GTYRAC 1 cut(s) 868
HinfI GANTC 2 cut(s) 155, 1270
HphI GGTGA 8 cut(s) 423, 445, 677, 698, 728, 751, 1195, 1376
Hpy166II GTNNAC 3 cut(s) 431, 638, 868
Hpy188I TCNGA 2 cut(s) 160, 1173
Hpy188III TCNNGA 9 cut(s) 725, 763, 779, 798, 1038, 1109, 1166, 1181, 1249
Hpy8I GTNNAC 3 cut(s) 431, 638, 868
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 6 cut(s) 11, 157, 299, 679, 826, 1078
HpyCH4III ACNGT 3 cut(s) 457, 1338, 1544
HpyCH4IV ACGT 1 cut(s) 525
HpyF10VI GCNNNNNNNGC 6 cut(s) 512, 563, 597, 1130, 1142, 1407
HpyF3I CTNAG 7 cut(s) 49, 157, 262, 315, 414, 806, 1495
HpySE526I ACGT 1 cut(s) 525
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 9 cut(s) 35, 69, 95, 828, 958, 1013, 1261, 1442, 1510
Ksp22I TGATCA 1 cut(s) 112
Kzo9I GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
LguI GCTCTTC 1 cut(s) 1039
LmnI GCTCC 4 cut(s) 82, 1087, 1130, 1435
Lsp1109I GCAGC 5 cut(s) 166, 566, 569, 1120, 1132
LweI GCATC 6 cut(s) 214, 390, 490, 519, 973, 1171
MaeI CTAG 5 cut(s) 641, 779, 798, 1038, 1446
MaeII ACGT 1 cut(s) 525
MaeIII GTNAC 6 cut(s) 254, 298, 334, 1201, 1212, 1544
MalI GATC 8 cut(s) 90, 114, 194, 276, 723, 1170, 1343, 1538
MboI GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
MboII GAAGA 9 cut(s) 362, 383, 731, 1006, 1026, 1066, 1312, 1405, 1563
MflI RGATCY 1 cut(s) 721
MhlI GDGCHC 1 cut(s) 87
MlsI TGGCCA 1 cut(s) 289
MluNI TGGCCA 1 cut(s) 289
MlyI GAGTC 1 cut(s) 149
MmeI TCCRAC 1 cut(s) 1203
Mox20I TGGCCA 1 cut(s) 289
Mph1103I ATGCAT 1 cut(s) 826
MscI TGGCCA 1 cut(s) 289
MseI TTAA 9 cut(s) 186, 198, 236, 279, 815, 977, 1064, 1104, 1579
MslI CAYNNNNRTG 1 cut(s) 90
Msp20I TGGCCA 1 cut(s) 289
MspA1I CMGCKG 1 cut(s) 695
MwoI GCNNNNNNNGC 6 cut(s) 512, 563, 597, 1130, 1142, 1407
NdeII GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
NlaIII CATG 9 cut(s) 35, 69, 95, 828, 958, 1013, 1261, 1442, 1510
NlaIV GGNNCC 2 cut(s) 960, 1431
NmuCI GTSAC 4 cut(s) 254, 1201, 1212, 1544
NsiI ATGCAT 1 cut(s) 826
NspI RCATGY 2 cut(s) 828, 1442
NspV TTCGAA 1 cut(s) 678
PaeR7I CTCGAG 2 cut(s) 909, 1247
PciSI GCTCTTC 1 cut(s) 1039
PfeI GAWTC 1 cut(s) 1270
PkrI GCNGC 7 cut(s) 181, 505, 556, 559, 590, 1135, 1147
Ple19I CGATCG 1 cut(s) 1344
PleI GAGTC 1 cut(s) 149
PpsI GAGTC 1 cut(s) 149
PpuMI RGGWCCY 1 cut(s) 308
Psp5II RGGWCCY 1 cut(s) 308
PspN4I GGNNCC 2 cut(s) 960, 1431
PspPI GGNCC 2 cut(s) 308, 958
PspPPI RGGWCCY 1 cut(s) 308
PspXI VCTCGAGB 1 cut(s) 909
PstI CTGCAG 2 cut(s) 556, 1150
PsuI RGATCY 1 cut(s) 721
PvuI CGATCG 1 cut(s) 1344
PvuII CAGCTG 1 cut(s) 695
RsaI GTAC 2 cut(s) 637, 1231
RsaNI GTAC 2 cut(s) 636, 1230
RseI CAYNNNNRTG 1 cut(s) 90
SapI GCTCTTC 1 cut(s) 1039
SaqAI TTAA 9 cut(s) 186, 198, 236, 279, 815, 977, 1064, 1104, 1579
SatI GCNGC 7 cut(s) 180, 504, 555, 558, 589, 1134, 1146
Sau3AI GATC 8 cut(s) 88, 112, 192, 274, 721, 1168, 1341, 1536
Sau96I GGNCC 2 cut(s) 308, 958
SchI GAGTC 1 cut(s) 149
SduI GDGCHC 1 cut(s) 87
SfaNI GCATC 6 cut(s) 214, 390, 490, 519, 973, 1171
SfcI CTRYAG 4 cut(s) 552, 690, 861, 1146
Sfr274I CTCGAG 2 cut(s) 909, 1247
SfuI TTCGAA 1 cut(s) 678
SinI GGWCC 2 cut(s) 308, 958
SlaI CTCGAG 2 cut(s) 909, 1247
SmiMI CAYNNNNRTG 1 cut(s) 90
SmlI CTYRAG 2 cut(s) 909, 1247
SmoI CTYRAG 2 cut(s) 909, 1247
SsiI CCGC 5 cut(s) 403, 504, 588, 630, 1025
SspMI CTAG 5 cut(s) 641, 779, 798, 1038, 1446
StyI CCWWGG 2 cut(s) 709, 1445
TaaI ACNGT 3 cut(s) 457, 1338, 1544
TaiI ACGT 1 cut(s) 528
TaqI TCGA 6 cut(s) 678, 910, 1248, 1340, 1344, 1416
TauI GCSGC 2 cut(s) 506, 591
TfiI GAWTC 1 cut(s) 1270
Tru1I TTAA 9 cut(s) 186, 198, 236, 279, 815, 977, 1064, 1104, 1579
Tru9I TTAA 9 cut(s) 186, 198, 236, 279, 815, 977, 1064, 1104, 1579
TscAI CASTG 3 cut(s) 157, 793, 1549
TseFI GTSAC 4 cut(s) 254, 1201, 1212, 1544
TseI GCWGC 5 cut(s) 179, 554, 557, 1133, 1145
Tsp45I GTSAC 4 cut(s) 254, 1201, 1212, 1544
TspDTI ATGAA 5 cut(s) 54, 840, 1007, 1274, 1313
TspRI CASTG 3 cut(s) 157, 793, 1549
VpaK11BI GGWCC 2 cut(s) 308, 958
XapI RAATTY 5 cut(s) 758, 1041, 1346, 1403, 1555
XbaI TCTAGA 3 cut(s) 778, 797, 1037
XceI RCATGY 2 cut(s) 828, 1442
XhoI CTCGAG 2 cut(s) 909, 1247
XmaJI CCTAGG 1 cut(s) 1445
XspI CTAG 5 cut(s) 641, 779, 798, 1038, 1446
Zsp2I ATGCAT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.