pycom12g02530
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
2222492 .. 2227022
4531 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g02530.2

Sequence Viewer

Length: 1671 bp
ATGATCTTTGCTTGTTTCAGCAATCTATTGAAATTAAAGGGGAATGGAAGAAAATGGTGTTTCATGGCCCTATTTCCCAGCATTTCCAAACACAAGACAGGAAGCCTCATTCCCACCAAGATTCCGGAGTTGAGAATGAGTGGAAAAGAAGGCCACGCAATTGGAATCGATCTGGGGACAACGTATTCGTGTGTAGCAGTGTGGCGATATGATCATATTGAAATCATAGTGAATGGTCAGGGCAACAGAACAACTCCGTCTTATGTAGCTTTCACTGATACTGAAAGGTTAATCGGTGATGCAGCATATAACCAGGTCATTAGAAACCCCTCAAACTCAATCTTTGGTGCAAAGCGATTAATCGGAAGGAGATTTGCTGACGCTTCTGTTCAAAATGATTTGAAGCTCTGGCCATTCAAGGTCACTGAAGGTCCTGATCACAAGCCCATGATTGTGGTTACCCACGAGGGTCAAGAGAAACAGTTTGCTGCTGAAGAAATATCATCTATGGTTCTCACAAAGATGCGGGAGATTGCTGAGGCCTACCTCGGCTCAAGTGTGAAGAAAGCAGTTATTACTGTCCCTGCTTACTTTACCGACTCACAACGTCAGGCTACAAAATGTGCTGGTGTCACTGCTGGCTTAGAGGTGATGCGAATCATCAATGAACCAACTGCAGCCGCCATTGCTTATGGAATTGATAATAAGGCTGGTTGGTATAGCAAGAGAAATGTTATGATATTTGACTTGGGTGGTGGTACTTTAGATGCGTCACTGCTTACCATAAGTTCTGGTGACTTTGAAGTGAAGGCGACGGCTGGAAATACTCACCTTGGTGGTGAAGACTTTGATAACAATATGGTGAATTACTGTGTTGAGAAGTTTAAGAAGAAGCATAGTTTGGACGTCAGTGGAAACCCTAGAGCTCTTAGGAGGTTAAAAAATGAATGTGAGAAGGCGAAGAGGAGACTTTCGTTTACGTCTGTGACAGATATTGAAATTGACTGTTTGTATCGGGGTGTTGATTTTTATACAACTTTTACCCGTGCAAAATTTGAACAACTGAACATGGATTTCTTCAACAAGTGCATGGAGCCAGTGGAGAAATGTTTGGAGGATGCCAAAATGGACATAAGCAATGTCGATGATGTTGTTCTTGTTGGTGGCTCCTCTAGAATTCCCAAGGTGCAGGAGCTATTACACAACGTGTTCATCGGCAAGGAGGTGTCCAACGGCATTAATCCGGATGAGGCCGTGGCATATGGTGCTGCTGTTCAAGCTGCTGTCTTGAATGGTAATCAAAGTTTGAAGCTTCAAGACTTCACTCTCTTGGATGTCATTCCTATGTCACTTGGGACAGATTCTGGTGAAGAAAAGCTCATGCATGTTATGATCCCAAGAAACACCAAAATTCCCACCAAGAAGAACTATACTTTTACAACTCTTAAGGACAATCAAAGTGGTGTTTACTGCGGAGTTTTCGAGGGTGAGAACGAATTAACCAAAGATAATAATTATTTGGGTGGCTTTGACATCGATGACATTCCTCCAGCTCCTAAGGGTGTTGCTAAAGTAGATGTTTGTTTTTCAATTGATGCAAATGGTATCCTGAATGTTTCTGCTGAGGTCATGTCCACTGGCCAGAAGAAGGAGATTACAATCAAAAGATGA
Functional Annotation

Protein Analysis

557

Amino Acids

61.33

Weight (kDa)

7.09

Isoelectric Point (pI)

34.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 909
AccIII TCCGGA 2 cut(s) 124, 1243
AciI CCGC 3 cut(s) 526, 681, 1473
AclWI GGATC 1 cut(s) 1387
AcoI YGGCCR 2 cut(s) 410, 1639
AcsI RAATTY 3 cut(s) 1052, 1176, 1410
AcuI CTGAAG 2 cut(s) 447, 513
AcyI GRCGYC 1 cut(s) 906
AdeI CACNNNGTG 1 cut(s) 1207
AfaI GTAC 1 cut(s) 760
AfiI CCNNNNNNNGG 1 cut(s) 1648
AflII CTTAAG 1 cut(s) 1445
AflIII ACRYGT 1 cut(s) 1206
AjnI CCWGG 1 cut(s) 312
AjuI GAANNNNNNNTTGG 2 cut(s) 884, 916
AleI CACNNNNGTG 1 cut(s) 834
AluBI AGCT 8 cut(s) 269, 406, 926, 1195, 1280, 1312, 1378, 1553
AluI AGCT 8 cut(s) 269, 406, 926, 1195, 1280, 1312, 1378, 1553
Alw21I GWGCWC 1 cut(s) 928
Alw26I GTCTC 1 cut(s) 961
AlwI GGATC 1 cut(s) 1387
AlwNI CAGNNNCTG 1 cut(s) 1364
Aor13HI TCCGGA 2 cut(s) 124, 1243
AoxI GGCC 6 cut(s) 66, 151, 410, 540, 1251, 1639
ApeKI GCWGC 5 cut(s) 302, 488, 677, 1268, 1280
ApoI RAATTY 3 cut(s) 1052, 1176, 1410
ArsI GACNNNNNNTTYG 2 cut(s) 169, 201
AseI ATTAAT 2 cut(s) 359, 1239
AspS9I GGNCC 2 cut(s) 67, 431
AsuHPI GGTGA 8 cut(s) 308, 661, 806, 821, 851, 874, 1379, 1499
AvaII GGWCC 1 cut(s) 431
AxyI CCTNAGG 1 cut(s) 1557
BalI TGGCCA 2 cut(s) 412, 1641
BanII GRGCYC 1 cut(s) 928
BauI CACGAG 1 cut(s) 464
BbsI GAAGAC 1 cut(s) 849
Bbv12I GWGCWC 1 cut(s) 928
BbvCI CCTCAGC 2 cut(s) 537, 1623
BbvI GCAGC 5 cut(s) 314, 475, 689, 1255, 1267
BceAI ACGGC 3 cut(s) 831, 1238, 1249
BciT130I CCWGG 1 cut(s) 314
BciVI GTATCC 1 cut(s) 1616
BclI TGATCA 2 cut(s) 211, 436
BcoDI GTCTC 1 cut(s) 961
BfaI CTAG 2 cut(s) 921, 1173
BfmI CTRYAG 1 cut(s) 675
BfrI CTTAAG 1 cut(s) 1445
BfuI GTATCC 1 cut(s) 1616
BisI GCNGC 6 cut(s) 303, 489, 678, 681, 1269, 1281
BlsI GCNGC 6 cut(s) 304, 490, 679, 682, 1270, 1282
Bme1390I CCNGG 1 cut(s) 314
Bme18I GGWCC 1 cut(s) 431
BmgT120I GGNCC 2 cut(s) 67, 431
BmiI GGNNCC 2 cut(s) 1095, 1168
BmrFI CCNGG 1 cut(s) 314
BmsI GCATC 6 cut(s) 289, 513, 642, 757, 1108, 1585
BpiI GAAGAC 1 cut(s) 849
BpmI CTGGAG 1 cut(s) 1533
Bpu10I CCTNAGC 2 cut(s) 537, 1623
BpuEI CTTGAG 1 cut(s) 538
Bsa29I ATCGAT 2 cut(s) 168, 1536
BsaBI GATNNNNATC 2 cut(s) 656, 1658
BsaHI GRCGYC 1 cut(s) 906
BsaJI CCNNGG 4 cut(s) 547, 832, 1182, 1254
BsaWI WCCGGW 2 cut(s) 124, 1243
Bsc4I CCNNNNNNNGG 1 cut(s) 1648
Bse1I ACTGG 2 cut(s) 1097, 1642
Bse21I CCTNAGG 1 cut(s) 1557
Bse3DI GCAATG 2 cut(s) 684, 1144
Bse8I GATNNNNATC 2 cut(s) 656, 1658
BseAI TCCGGA 2 cut(s) 124, 1243
BseBI CCWGG 1 cut(s) 314
BseCI ATCGAT 2 cut(s) 168, 1536
BseDI CCNNGG 4 cut(s) 547, 832, 1182, 1254
BseGI GGATG 3 cut(s) 1123, 1252, 1339
BseJI GATNNNNATC 2 cut(s) 656, 1658
BseLI CCNNNNNNNGG 1 cut(s) 1648
BseMI GCAATG 2 cut(s) 684, 1144
BseMII CTCAG 2 cut(s) 528, 1614
BseNI ACTGG 2 cut(s) 1097, 1642
BseRI GAGGAG 2 cut(s) 979, 1159
BseXI GCAGC 5 cut(s) 314, 475, 689, 1255, 1267
BseYI CCCAGC 1 cut(s) 77
BsgI GTGCAG 1 cut(s) 1208
BshFI GGCC 6 cut(s) 68, 153, 412, 542, 1253, 1641
BshVI ATCGAT 2 cut(s) 168, 1536
BsiHKAI GWGCWC 1 cut(s) 928
BsiSI CCGG 2 cut(s) 125, 1244
BslFI GGGAC 3 cut(s) 190, 566, 1369
BslI CCNNNNNNNGG 1 cut(s) 1648
BsmAI GTCTC 1 cut(s) 961
BsmFI GGGAC 3 cut(s) 190, 566, 1369
BsnI GGCC 6 cut(s) 68, 153, 412, 542, 1253, 1641
Bsp1286I GDGCHC 1 cut(s) 928
Bsp13I TCCGGA 2 cut(s) 124, 1243
Bsp143I GATC 5 cut(s) 3, 169, 211, 436, 1392
BspACI CCGC 3 cut(s) 526, 681, 1473
BspANI GGCC 6 cut(s) 68, 153, 412, 542, 1253, 1641
BspCNI CTCAG 2 cut(s) 529, 1615
BspDI ATCGAT 2 cut(s) 168, 1536
BspEI TCCGGA 2 cut(s) 124, 1243
BspLI GGNNCC 2 cut(s) 1095, 1168
BspMAI CTGCAG 1 cut(s) 679
BspPI GGATC 1 cut(s) 1387
BspTI CTTAAG 1 cut(s) 1445
BsrDI GCAATG 2 cut(s) 684, 1144
BsrI ACTGG 2 cut(s) 1097, 1642
BssECI CCNNGG 4 cut(s) 547, 832, 1182, 1254
BssMI GATC 5 cut(s) 3, 169, 211, 436, 1392
BssNI GRCGYC 1 cut(s) 906
BssSI CACGAG 1 cut(s) 464
BssT1I CCWWGG 2 cut(s) 832, 1182
Bst2BI CACGAG 1 cut(s) 464
Bst2UI CCWGG 1 cut(s) 314
Bst4CI ACNGT 4 cut(s) 483, 580, 872, 1007
Bst6I CTCTTC 1 cut(s) 956
BstACI GRCGYC 1 cut(s) 906
BstAFI CTTAAG 1 cut(s) 1445
BstAPI GCANNNNNTGC 1 cut(s) 1265
BstC8I GCNNGC 1 cut(s) 640
BstDEI CTNAG 5 cut(s) 537, 643, 929, 1557, 1623
BstDSI CCRYGG 1 cut(s) 1254
BstEII GGTNACC 1 cut(s) 457
BstF5I GGATG 3 cut(s) 1123, 1252, 1339
BstKTI GATC 5 cut(s) 6, 172, 214, 439, 1395
BstMAI GTCTC 1 cut(s) 961
BstMBI GATC 5 cut(s) 3, 169, 211, 436, 1392
BstMWI GCNNNNNNNGC 3 cut(s) 686, 1265, 1277
BstNI CCWGG 1 cut(s) 314
BstNSI RCATGY 1 cut(s) 1388
BstPI GGTNACC 1 cut(s) 457
BstSCI CCNGG 1 cut(s) 312
BstSFI CTRYAG 1 cut(s) 675
BstV1I GCAGC 5 cut(s) 314, 475, 689, 1255, 1267
BstV2I GAAGAC 1 cut(s) 849
BstXI CCANNNNNNTGG 2 cut(s) 161, 454
Bsu15I ATCGAT 2 cut(s) 168, 1536
Bsu36I CCTNAGG 1 cut(s) 1557
BsuI GTATCC 1 cut(s) 1616
BsuRI GGCC 6 cut(s) 68, 153, 412, 542, 1253, 1641
BsuTUI ATCGAT 2 cut(s) 168, 1536
BtgI CCRYGG 1 cut(s) 1254
BtsCI GGATG 3 cut(s) 1123, 1252, 1339
BtsI GCAGTG 3 cut(s) 204, 633, 773
BtsIMutI CAGTG 8 cut(s) 204, 273, 423, 633, 773, 916, 1104, 1635
Cac8I GCNNGC 1 cut(s) 640
CaiI CAGNNNCTG 1 cut(s) 1364
Cfr13I GGNCC 2 cut(s) 67, 431
ClaI ATCGAT 2 cut(s) 168, 1536
CseI GACGC 2 cut(s) 389, 759
CsiI ACCWGGT 1 cut(s) 312
Csp6I GTAC 1 cut(s) 759
CspCI CAANNNNNGTGG 2 cut(s) 1441, 1476
CviAII CATG 7 cut(s) 64, 448, 1069, 1090, 1381, 1385, 1630
CviQI GTAC 1 cut(s) 759
DdeI CTNAG 5 cut(s) 537, 643, 929, 1557, 1623
DpnI GATC 5 cut(s) 5, 171, 213, 438, 1394
DpnII GATC 5 cut(s) 3, 169, 211, 436, 1392
DraIII CACNNNGTG 1 cut(s) 1207
EaeI YGGCCR 2 cut(s) 410, 1639
Eam1104I CTCTTC 1 cut(s) 956
EarI CTCTTC 1 cut(s) 956
Ecl136II GAGCTC 1 cut(s) 926
Eco130I CCWWGG 2 cut(s) 832, 1182
Eco147I AGGCCT 1 cut(s) 542
Eco24I GRGCYC 1 cut(s) 928
Eco47I GGWCC 1 cut(s) 431
Eco53kI GAGCTC 1 cut(s) 926
Eco57I CTGAAG 2 cut(s) 447, 513
Eco81I CCTNAGG 1 cut(s) 1557
Eco91I GGTNACC 1 cut(s) 457
EcoICRI GAGCTC 1 cut(s) 926
EcoO109I RGGNCCY 1 cut(s) 431
EcoO65I GGTNACC 1 cut(s) 457
EcoRI GAATTC 1 cut(s) 1176
EcoRII CCWGG 1 cut(s) 312
EcoT14I CCWWGG 2 cut(s) 832, 1182
EcoT22I ATGCAT 1 cut(s) 1386
EcoT38I GRGCYC 1 cut(s) 928
ErhI CCWWGG 2 cut(s) 832, 1182
FaeI CATG 7 cut(s) 67, 451, 1072, 1093, 1384, 1388, 1633
FaqI GGGAC 3 cut(s) 190, 566, 1369
FatI CATG 7 cut(s) 63, 447, 1068, 1089, 1380, 1384, 1629
FauI CCCGC 1 cut(s) 519
FauNDI CATATG 1 cut(s) 1261
FbaI TGATCA 2 cut(s) 211, 436
Fnu4HI GCNGC 6 cut(s) 303, 489, 678, 681, 1269, 1281
FokI GGATG 3 cut(s) 1130, 1259, 1346
FriOI GRGCYC 1 cut(s) 928
Fsp4HI GCNGC 6 cut(s) 303, 489, 678, 681, 1269, 1281
FspBI CTAG 2 cut(s) 921, 1173
GluI GCNGC 6 cut(s) 303, 489, 678, 681, 1269, 1281
GsaI CCCAGC 1 cut(s) 81
GsuI CTGGAG 1 cut(s) 1533
HaeIII GGCC 6 cut(s) 68, 153, 412, 542, 1253, 1641
HapII CCGG 2 cut(s) 125, 1244
HgaI GACGC 2 cut(s) 389, 759
Hin1I GRCGYC 1 cut(s) 906
Hin1II CATG 7 cut(s) 67, 451, 1072, 1093, 1384, 1388, 1633
HindIII AAGCTT 1 cut(s) 1310
HinfI GANTC 5 cut(s) 121, 165, 599, 657, 1361
HpaII CCGG 2 cut(s) 125, 1244
HphI GGTGA 8 cut(s) 308, 661, 806, 821, 851, 874, 1379, 1499
Hpy166II GTNNAC 3 cut(s) 978, 1468, 1635
Hpy188I TCNGA 1 cut(s) 365
Hpy188III TCNNGA 8 cut(s) 125, 434, 473, 1173, 1244, 1288, 1316, 1609
Hpy8I GTNNAC 3 cut(s) 978, 1468, 1635
Hpy99I CGWCG 1 cut(s) 817
HpyAV CCTTC 6 cut(s) 143, 360, 422, 802, 949, 1642
HpyCH4III ACNGT 4 cut(s) 483, 580, 872, 1007
HpyCH4IV ACGT 5 cut(s) 182, 607, 906, 980, 1206
HpyCH4V TGCA 8 cut(s) 302, 350, 677, 1049, 1089, 1189, 1384, 1598
HpyF10VI GCNNNNNNNGC 3 cut(s) 686, 1265, 1277
HpyF3I CTNAG 5 cut(s) 537, 643, 929, 1557, 1623
HpySE526I ACGT 5 cut(s) 182, 607, 906, 980, 1206
Hsp92I GRCGYC 1 cut(s) 906
Hsp92II CATG 7 cut(s) 67, 451, 1072, 1093, 1384, 1388, 1633
Kpn2I TCCGGA 2 cut(s) 124, 1243
Ksp22I TGATCA 2 cut(s) 211, 436
Kzo9I GATC 5 cut(s) 3, 169, 211, 436, 1392
LmnI GCTCC 4 cut(s) 1093, 1172, 1192, 1558
Lsp1109I GCAGC 5 cut(s) 314, 475, 689, 1255, 1267
LweI GCATC 6 cut(s) 289, 513, 642, 757, 1108, 1585
MabI ACCWGGT 1 cut(s) 312
MaeI CTAG 2 cut(s) 921, 1173
MaeII ACGT 5 cut(s) 182, 607, 906, 980, 1206
MaeIII GTNAC 7 cut(s) 421, 457, 631, 771, 794, 985, 1347
MalI GATC 5 cut(s) 5, 171, 213, 438, 1394
MboI GATC 5 cut(s) 3, 169, 211, 436, 1392
MfeI CAATTG 2 cut(s) 159, 1590
MhlI GDGCHC 1 cut(s) 928
MlsI TGGCCA 2 cut(s) 412, 1641
MluNI TGGCCA 2 cut(s) 412, 1641
MlyI GAGTC 1 cut(s) 593
MmeI TCCRAC 1 cut(s) 1254
Mox20I TGGCCA 2 cut(s) 412, 1641
Mph1103I ATGCAT 1 cut(s) 1386
MroI TCCGGA 2 cut(s) 124, 1243
MscI TGGCCA 2 cut(s) 412, 1641
MseI TTAA 8 cut(s) 35, 290, 359, 885, 938, 1239, 1446, 1499
MslI CAYNNNNRTG 4 cut(s) 452, 521, 834, 1343
Msp20I TGGCCA 2 cut(s) 412, 1641
MspCI CTTAAG 1 cut(s) 1445
MspI CCGG 2 cut(s) 125, 1244
MspR9I CCNGG 1 cut(s) 314
MunI CAATTG 2 cut(s) 159, 1590
MvaI CCWGG 1 cut(s) 314
MwoI GCNNNNNNNGC 3 cut(s) 686, 1265, 1277
NdeI CATATG 1 cut(s) 1261
NdeII GATC 5 cut(s) 3, 169, 211, 436, 1392
NlaIII CATG 7 cut(s) 67, 451, 1072, 1093, 1384, 1388, 1633
NlaIV GGNNCC 2 cut(s) 1095, 1168
NmeAIII GCCGAG 1 cut(s) 528
NmuCI GTSAC 6 cut(s) 421, 631, 771, 794, 985, 1347
NsiI ATGCAT 1 cut(s) 1386
NspI RCATGY 1 cut(s) 1388
OliI CACNNNNGTG 1 cut(s) 834
PceI AGGCCT 1 cut(s) 542
PfeI GAWTC 4 cut(s) 121, 165, 657, 1361
PkrI GCNGC 6 cut(s) 304, 490, 679, 682, 1270, 1282
PleI GAGTC 1 cut(s) 593
PpsI GAGTC 1 cut(s) 593
PpuMI RGGWCCY 1 cut(s) 431
PshBI ATTAAT 2 cut(s) 359, 1239
Psp124BI GAGCTC 1 cut(s) 928
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 1 cut(s) 312
PspEI GGTNACC 1 cut(s) 457
PspFI CCCAGC 1 cut(s) 77
PspGI CCWGG 1 cut(s) 312
PspN4I GGNNCC 2 cut(s) 1095, 1168
PspPI GGNCC 2 cut(s) 67, 431
PspPPI RGGWCCY 1 cut(s) 431
PstI CTGCAG 1 cut(s) 679
PstNI CAGNNNCTG 1 cut(s) 1364
RsaI GTAC 1 cut(s) 760
RsaNI GTAC 1 cut(s) 759
RseI CAYNNNNRTG 4 cut(s) 452, 521, 834, 1343
SacI GAGCTC 1 cut(s) 928
SaqAI TTAA 8 cut(s) 35, 290, 359, 885, 938, 1239, 1446, 1499
SatI GCNGC 6 cut(s) 303, 489, 678, 681, 1269, 1281
Sau3AI GATC 5 cut(s) 3, 169, 211, 436, 1392
Sau96I GGNCC 2 cut(s) 67, 431
SchI GAGTC 1 cut(s) 593
ScrFI CCNGG 1 cut(s) 314
SduI GDGCHC 1 cut(s) 928
SexAI ACCWGGT 1 cut(s) 312
SfaNI GCATC 6 cut(s) 289, 513, 642, 757, 1108, 1585
SfcI CTRYAG 1 cut(s) 675
SinI GGWCC 1 cut(s) 431
SmiMI CAYNNNNRTG 4 cut(s) 452, 521, 834, 1343
SmlI CTYRAG 2 cut(s) 553, 1445
SmoI CTYRAG 2 cut(s) 553, 1445
SseBI AGGCCT 1 cut(s) 542
SsiI CCGC 3 cut(s) 526, 681, 1473
SspMI CTAG 2 cut(s) 921, 1173
SstI GAGCTC 1 cut(s) 928
StuI AGGCCT 1 cut(s) 542
StyD4I CCNGG 1 cut(s) 312
StyI CCWWGG 2 cut(s) 832, 1182
TaaI ACNGT 4 cut(s) 483, 580, 872, 1007
TaiI ACGT 5 cut(s) 185, 610, 909, 983, 1209
TaqI TCGA 4 cut(s) 168, 1143, 1482, 1536
TauI GCSGC 1 cut(s) 683
TfiI GAWTC 4 cut(s) 121, 165, 657, 1361
Tru1I TTAA 8 cut(s) 35, 290, 359, 885, 938, 1239, 1446, 1499
Tru9I TTAA 8 cut(s) 35, 290, 359, 885, 938, 1239, 1446, 1499
TscAI CASTG 8 cut(s) 204, 280, 430, 640, 780, 916, 1104, 1642
TseFI GTSAC 6 cut(s) 421, 631, 771, 794, 985, 1347
TseI GCWGC 5 cut(s) 302, 488, 677, 1268, 1280
Tsp45I GTSAC 6 cut(s) 421, 631, 771, 794, 985, 1347
TspDTI ATGAA 4 cut(s) 52, 681, 960, 1201
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 8 cut(s) 204, 280, 430, 640, 780, 916, 1104, 1642
Vha464I CTTAAG 1 cut(s) 1445
VpaK11BI GGWCC 1 cut(s) 431
VspI ATTAAT 2 cut(s) 359, 1239
XapI RAATTY 3 cut(s) 1052, 1176, 1410
XbaI TCTAGA 1 cut(s) 1172
XceI RCATGY 1 cut(s) 1388
XspI CTAG 2 cut(s) 921, 1173
ZraI GACGTC 1 cut(s) 907
Zsp2I ATGCAT 1 cut(s) 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.