mediator of RNA polymerase II transcription subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 434 |
| AccII | CGCG | 1 cut(s) | 452 |
| AclWI | GGATC | 1 cut(s) | 1994 |
| AcoI | YGGCCR | 3 cut(s) | 715, 932, 2161 |
| AcsI | RAATTY | 8 cut(s) | 534, 608, 647, 1403, 1686, 1991, 2048, 2200 |
| AcuI | CTGAAG | 2 cut(s) | 969, 1035 |
| AcyI | GRCGYC | 1 cut(s) | 903 |
| AfaI | GTAC | 2 cut(s) | 334, 1282 |
| AflIII | ACRYGT | 2 cut(s) | 43, 705 |
| AjiI | CACGTC | 2 cut(s) | 44, 706 |
| AjnI | CCWGG | 1 cut(s) | 2090 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2024, 2056 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1767, 1799 |
| AluBI | AGCT | 7 cut(s) | 394, 484, 1340, 1389, 1735, 1778, 1790 |
| AluI | AGCT | 7 cut(s) | 394, 484, 1340, 1389, 1735, 1778, 1790 |
| Alw26I | GTCTC | 8 cut(s) | 30, 205, 503, 697, 756, 1338, 1483, 2143 |
| AlwI | GGATC | 1 cut(s) | 1994 |
| Ama87I | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| AoxI | GGCC | 6 cut(s) | 3, 201, 715, 932, 1162, 2161 |
| ApeKI | GCWGC | 4 cut(s) | 1199, 1202, 1778, 1790 |
| ApoI | RAATTY | 8 cut(s) | 534, 608, 647, 1403, 1686, 1991, 2048, 2200 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 481, 513 |
| AseI | ATTAAT | 1 cut(s) | 408 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1004 |
| AspS9I | GGNCC | 2 cut(s) | 953, 1603 |
| AsuHPI | GGTGA | 9 cut(s) | 164, 502, 1068, 1322, 1343, 1373, 1396, 1840, 2021 |
| AsuII | TTCGAA | 1 cut(s) | 1323 |
| AvaI | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| AvaII | GGWCC | 2 cut(s) | 953, 1603 |
| BalI | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| BanI | GGYRCC | 1 cut(s) | 434 |
| BauI | CACGAG | 1 cut(s) | 1927 |
| BbsI | GAAGAC | 2 cut(s) | 162, 1711 |
| BbvCI | CCTCAGC | 2 cut(s) | 699, 1059 |
| BbvI | GCAGC | 4 cut(s) | 1211, 1214, 1765, 1777 |
| BccI | CCATC | 1 cut(s) | 1307 |
| BceAI | ACGGC | 1 cut(s) | 144 |
| BciT130I | CCWGG | 1 cut(s) | 2092 |
| BciVI | GTATCC | 1 cut(s) | 2138 |
| BclI | TGATCA | 1 cut(s) | 741 |
| BcoDI | GTCTC | 8 cut(s) | 30, 205, 503, 697, 756, 1338, 1483, 2143 |
| BfaI | CTAG | 5 cut(s) | 227, 1286, 1424, 1443, 1683 |
| BfmI | CTRYAG | 4 cut(s) | 423, 1335, 1506, 1791 |
| BfuI | GTATCC | 1 cut(s) | 2138 |
| BglII | AGATCT | 1 cut(s) | 1366 |
| BisI | GCNGC | 9 cut(s) | 438, 450, 792, 1149, 1200, 1203, 1234, 1779, 1791 |
| BlsI | GCNGC | 9 cut(s) | 439, 451, 793, 1150, 1201, 1204, 1235, 1780, 1792 |
| Bme1390I | CCNGG | 1 cut(s) | 2092 |
| Bme18I | GGWCC | 2 cut(s) | 953, 1603 |
| BmeT110I | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| BmgBI | CACGTC | 2 cut(s) | 44, 706 |
| BmgT120I | GGNCC | 2 cut(s) | 953, 1603 |
| BmiI | GGNNCC | 4 cut(s) | 341, 436, 1605, 2076 |
| BmrFI | CCNGG | 1 cut(s) | 2092 |
| BmsI | GCATC | 9 cut(s) | 273, 661, 859, 1035, 1135, 1164, 1618, 1816, 2107 |
| BpiI | GAAGAC | 2 cut(s) | 162, 1711 |
| BpmI | CTGGAG | 2 cut(s) | 609, 1362 |
| Bpu10I | CCTNAGC | 3 cut(s) | 7, 699, 1059 |
| Bpu14I | TTCGAA | 1 cut(s) | 1323 |
| BpuEI | CTTGAG | 3 cut(s) | 478, 514, 706 |
| Bsa29I | ATCGAT | 1 cut(s) | 267 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1178, 2180 |
| BsaHI | GRCGYC | 1 cut(s) | 903 |
| BsaJI | CCNNGG | 6 cut(s) | 351, 450, 632, 1354, 1692, 2090 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 883, 913, 1767, 1797 |
| Bse118I | RCCGGY | 1 cut(s) | 798 |
| Bse1I | ACTGG | 4 cut(s) | 626, 718, 1438, 2164 |
| Bse3DI | GCAATG | 4 cut(s) | 1155, 1206, 1295, 1654 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1178, 2180 |
| BseBI | CCWGG | 1 cut(s) | 2092 |
| BseCI | ATCGAT | 1 cut(s) | 267 |
| BseDI | CCNNGG | 6 cut(s) | 351, 450, 632, 1354, 1692, 2090 |
| BseGI | GGATG | 3 cut(s) | 262, 511, 1849 |
| BseJI | GATNNNNATC | 2 cut(s) | 1178, 2180 |
| BseMI | GCAATG | 4 cut(s) | 1155, 1206, 1295, 1654 |
| BseMII | CTCAG | 6 cut(s) | 690, 921, 951, 1050, 2154, 2210 |
| BseNI | ACTGG | 4 cut(s) | 626, 718, 1438, 2164 |
| BseRI | GAGGAG | 2 cut(s) | 223, 1501 |
| BseXI | GCAGC | 4 cut(s) | 1211, 1214, 1765, 1777 |
| BsgI | GTGCAG | 1 cut(s) | 525 |
| Bsh1236I | CGCG | 1 cut(s) | 452 |
| Bsh1285I | CGRYCG | 1 cut(s) | 788 |
| BshFI | GGCC | 6 cut(s) | 5, 203, 717, 934, 1164, 2163 |
| BshNI | GGYRCC | 1 cut(s) | 434 |
| BshVI | ATCGAT | 1 cut(s) | 267 |
| BsiEI | CGRYCG | 1 cut(s) | 788 |
| BsiHKCI | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| BsiSI | CCGG | 1 cut(s) | 799 |
| BslFI | GGGAC | 1 cut(s) | 1088 |
| BsmAI | GTCTC | 8 cut(s) | 30, 205, 503, 697, 756, 1338, 1483, 2143 |
| BsmBI | CGTCTC | 2 cut(s) | 697, 756 |
| BsmFI | GGGAC | 1 cut(s) | 1088 |
| BsnI | GGCC | 6 cut(s) | 5, 203, 717, 934, 1164, 2163 |
| BsoBI | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| Bsp119I | TTCGAA | 1 cut(s) | 1323 |
| Bsp143I | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| BspANI | GGCC | 6 cut(s) | 5, 203, 717, 934, 1164, 2163 |
| BspCNI | CTCAG | 6 cut(s) | 691, 920, 952, 1051, 2153, 2211 |
| BspDI | ATCGAT | 1 cut(s) | 267 |
| BspFNI | CGCG | 1 cut(s) | 452 |
| BspLI | GGNNCC | 4 cut(s) | 341, 436, 1605, 2076 |
| BspMAI | CTGCAG | 1 cut(s) | 1795 |
| BspPI | GGATC | 1 cut(s) | 1994 |
| BspQI | GCTCTTC | 1 cut(s) | 1684 |
| BspT104I | TTCGAA | 1 cut(s) | 1323 |
| BspT107I | GGYRCC | 1 cut(s) | 434 |
| BsrDI | GCAATG | 4 cut(s) | 1155, 1206, 1295, 1654 |
| BsrFI | RCCGGY | 1 cut(s) | 798 |
| BsrI | ACTGG | 4 cut(s) | 626, 718, 1438, 2164 |
| BssAI | RCCGGY | 1 cut(s) | 798 |
| BssECI | CCNNGG | 6 cut(s) | 351, 450, 632, 1354, 1692, 2090 |
| BssMI | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| BssNI | GRCGYC | 1 cut(s) | 903 |
| BssSI | CACGAG | 1 cut(s) | 1927 |
| BssT1I | CCWWGG | 3 cut(s) | 351, 1354, 1692 |
| Bst2BI | CACGAG | 1 cut(s) | 1927 |
| Bst2UI | CCWGG | 1 cut(s) | 2092 |
| Bst4CI | ACNGT | 8 cut(s) | 251, 680, 1005, 1102, 1966, 1983, 2189, 2234 |
| Bst6I | CTCTTC | 4 cut(s) | 990, 1684, 1940, 2063 |
| BstACI | GRCGYC | 1 cut(s) | 903 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 434, 1157, 1208 |
| BstBI | TTCGAA | 1 cut(s) | 1323 |
| BstC8I | GCNNGC | 3 cut(s) | 796, 800, 1162 |
| BstDEI | CTNAG | 8 cut(s) | 7, 699, 907, 960, 1059, 1451, 2140, 2219 |
| BstDSI | CCRYGG | 1 cut(s) | 450 |
| BstF5I | GGATG | 3 cut(s) | 262, 511, 1849 |
| BstFNI | CGCG | 1 cut(s) | 452 |
| BstKTI | GATC | 8 cut(s) | 271, 744, 788, 922, 1369, 1816, 1989, 2184 |
| BstMAI | GTCTC | 8 cut(s) | 30, 205, 503, 697, 756, 1338, 1483, 2143 |
| BstMBI | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| BstMCI | CGRYCG | 1 cut(s) | 788 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 434, 446, 1157, 1208, 1242, 1775, 1787, 2052 |
| BstNI | CCWGG | 1 cut(s) | 2092 |
| BstNSI | RCATGY | 2 cut(s) | 1473, 2087 |
| BstSCI | CCNGG | 1 cut(s) | 2090 |
| BstSFI | CTRYAG | 4 cut(s) | 423, 1335, 1506, 1791 |
| BstUI | CGCG | 1 cut(s) | 452 |
| BstV1I | GCAGC | 4 cut(s) | 1211, 1214, 1765, 1777 |
| BstV2I | GAAGAC | 2 cut(s) | 162, 1711 |
| BstX2I | RGATCY | 1 cut(s) | 1366 |
| BstYI | RGATCY | 1 cut(s) | 1366 |
| Bsu15I | ATCGAT | 1 cut(s) | 267 |
| BsuI | GTATCC | 1 cut(s) | 2138 |
| BsuRI | GGCC | 6 cut(s) | 5, 203, 717, 934, 1164, 2163 |
| BsuTUI | ATCGAT | 1 cut(s) | 267 |
| BtgI | CCRYGG | 1 cut(s) | 450 |
| BtgZI | GCGATG | 1 cut(s) | 1641 |
| BtrI | CACGTC | 2 cut(s) | 44, 706 |
| BtsCI | GGATG | 3 cut(s) | 262, 511, 1849 |
| BtsI | GCAGTG | 1 cut(s) | 86 |
| BtsIMutI | CAGTG | 6 cut(s) | 86, 711, 751, 1098, 1431, 2194 |
| Cac8I | GCNNGC | 3 cut(s) | 796, 800, 1162 |
| Cfr10I | RCCGGY | 1 cut(s) | 798 |
| Cfr13I | GGNCC | 2 cut(s) | 953, 1603 |
| Cfr42I | CCGCGG | 1 cut(s) | 453 |
| ClaI | ATCGAT | 1 cut(s) | 267 |
| CseI | GACGC | 4 cut(s) | 679, 911, 1118, 1491 |
| Csp6I | GTAC | 2 cut(s) | 333, 1281 |
| CviQI | GTAC | 2 cut(s) | 333, 1281 |
| DdeI | CTNAG | 8 cut(s) | 7, 699, 907, 960, 1059, 1451, 2140, 2219 |
| DpnI | GATC | 8 cut(s) | 270, 743, 787, 921, 1368, 1815, 1988, 2183 |
| DpnII | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| DraI | TTTAAA | 1 cut(s) | 607 |
| EaeI | YGGCCR | 3 cut(s) | 715, 932, 2161 |
| Eam1104I | CTCTTC | 4 cut(s) | 990, 1684, 1940, 2063 |
| EarI | CTCTTC | 4 cut(s) | 990, 1684, 1940, 2063 |
| Eco130I | CCWWGG | 3 cut(s) | 351, 1354, 1692 |
| Eco32I | GATATC | 1 cut(s) | 655 |
| Eco47I | GGWCC | 2 cut(s) | 953, 1603 |
| Eco57I | CTGAAG | 2 cut(s) | 969, 1035 |
| Eco88I | CYCGRG | 3 cut(s) | 633, 1554, 1892 |
| EcoO109I | RGGNCCY | 1 cut(s) | 953 |
| EcoRI | GAATTC | 3 cut(s) | 1403, 1686, 1991 |
| EcoRII | CCWGG | 1 cut(s) | 2090 |
| EcoRV | GATATC | 1 cut(s) | 655 |
| EcoT14I | CCWWGG | 3 cut(s) | 351, 1354, 1692 |
| EcoT22I | ATGCAT | 1 cut(s) | 1471 |
| ErhI | CCWWGG | 3 cut(s) | 351, 1354, 1692 |
| Esp3I | CGTCTC | 2 cut(s) | 697, 756 |
| FaqI | GGGAC | 1 cut(s) | 1088 |
| FauI | CCCGC | 4 cut(s) | 12, 62, 992, 1663 |
| FauNDI | CATATG | 2 cut(s) | 314, 430 |
| FbaI | TGATCA | 1 cut(s) | 741 |
| Fnu4HI | GCNGC | 9 cut(s) | 438, 450, 792, 1149, 1200, 1203, 1234, 1779, 1791 |
| FokI | GGATG | 3 cut(s) | 269, 518, 1856 |
| Fsp4HI | GCNGC | 9 cut(s) | 438, 450, 792, 1149, 1200, 1203, 1234, 1779, 1791 |
| FspBI | CTAG | 5 cut(s) | 227, 1286, 1424, 1443, 1683 |
| GluI | GCNGC | 9 cut(s) | 438, 450, 792, 1149, 1200, 1203, 1234, 1779, 1791 |
| GsuI | CTGGAG | 2 cut(s) | 609, 1362 |
| HaeIII | GGCC | 6 cut(s) | 5, 203, 717, 934, 1164, 2163 |
| HapII | CCGG | 1 cut(s) | 799 |
| HgaI | GACGC | 4 cut(s) | 679, 911, 1118, 1491 |
| Hin1I | GRCGYC | 1 cut(s) | 903 |
| HincII | GTYRAC | 1 cut(s) | 1513 |
| HindII | GTYRAC | 1 cut(s) | 1513 |
| HindIII | AAGCTT | 1 cut(s) | 482 |
| HinfI | GANTC | 4 cut(s) | 469, 496, 1915, 2221 |
| HpaII | CCGG | 1 cut(s) | 799 |
| HphI | GGTGA | 9 cut(s) | 164, 502, 1068, 1322, 1343, 1373, 1396, 1840, 2021 |
| Hpy166II | GTNNAC | 5 cut(s) | 711, 810, 1076, 1283, 1513 |
| Hpy188I | TCNGA | 2 cut(s) | 505, 1818 |
| Hpy8I | GTNNAC | 5 cut(s) | 711, 810, 1076, 1283, 1513 |
| HpyAV | CCTTC | 6 cut(s) | 9, 193, 376, 944, 1324, 1723 |
| HpyCH4III | ACNGT | 8 cut(s) | 251, 680, 1005, 1102, 1966, 1983, 2189, 2234 |
| HpyCH4IV | ACGT | 3 cut(s) | 43, 705, 1170 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 434, 446, 1157, 1208, 1242, 1775, 1787, 2052 |
| HpyF3I | CTNAG | 8 cut(s) | 7, 699, 907, 960, 1059, 1451, 2140, 2219 |
| HpySE526I | ACGT | 3 cut(s) | 43, 705, 1170 |
| Hsp92I | GRCGYC | 1 cut(s) | 903 |
| KroI | GCCGGC | 1 cut(s) | 798 |
| KroNI | GCCGGC | 1 cut(s) | 800 |
| Ksp22I | TGATCA | 1 cut(s) | 741 |
| KspI | CCGCGG | 1 cut(s) | 453 |
| Kzo9I | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| LguI | GCTCTTC | 1 cut(s) | 1684 |
| LmnI | GCTCC | 5 cut(s) | 339, 391, 1732, 1775, 2080 |
| Lsp1109I | GCAGC | 4 cut(s) | 1211, 1214, 1765, 1777 |
| LweI | GCATC | 9 cut(s) | 273, 661, 859, 1035, 1135, 1164, 1618, 1816, 2107 |
| MaeI | CTAG | 5 cut(s) | 227, 1286, 1424, 1443, 1683 |
| MaeII | ACGT | 3 cut(s) | 43, 705, 1170 |
| MalI | GATC | 8 cut(s) | 270, 743, 787, 921, 1368, 1815, 1988, 2183 |
| MboI | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| MfeI | CAATTG | 1 cut(s) | 803 |
| MflI | RGATCY | 1 cut(s) | 1366 |
| MlsI | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| MluNI | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| MlyI | GAGTC | 2 cut(s) | 505, 2230 |
| MmeI | TCCRAC | 1 cut(s) | 1848 |
| Mox20I | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| Mph1103I | ATGCAT | 1 cut(s) | 1471 |
| MroNI | GCCGGC | 1 cut(s) | 798 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1004 |
| MscI | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| MseI | TTAA | 8 cut(s) | 408, 606, 881, 924, 1460, 1622, 1709, 1749 |
| Msp20I | TGGCCA | 3 cut(s) | 717, 934, 2163 |
| MspA1I | CMGCKG | 2 cut(s) | 452, 1340 |
| MspI | CCGG | 1 cut(s) | 799 |
| MspR9I | CCNGG | 1 cut(s) | 2092 |
| MunI | CAATTG | 1 cut(s) | 803 |
| MvaI | CCWGG | 1 cut(s) | 2092 |
| MvnI | CGCG | 1 cut(s) | 452 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 434, 446, 1157, 1208, 1242, 1775, 1787, 2052 |
| NaeI | GCCGGC | 1 cut(s) | 800 |
| NdeI | CATATG | 2 cut(s) | 314, 430 |
| NdeII | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| NgoMIV | GCCGGC | 1 cut(s) | 798 |
| NlaIV | GGNNCC | 4 cut(s) | 341, 436, 1605, 2076 |
| NmuCI | GTSAC | 6 cut(s) | 84, 508, 899, 1846, 1857, 2189 |
| NsiI | ATGCAT | 1 cut(s) | 1471 |
| NspI | RCATGY | 2 cut(s) | 1473, 2087 |
| NspV | TTCGAA | 1 cut(s) | 1323 |
| PaeR7I | CTCGAG | 2 cut(s) | 1554, 1892 |
| PciSI | GCTCTTC | 1 cut(s) | 1684 |
| PdiI | GCCGGC | 1 cut(s) | 800 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1004 |
| PfeI | GAWTC | 2 cut(s) | 469, 1915 |
| PkrI | GCNGC | 9 cut(s) | 439, 451, 793, 1150, 1201, 1204, 1235, 1780, 1792 |
| Ple19I | CGATCG | 1 cut(s) | 788 |
| PleI | GAGTC | 2 cut(s) | 504, 2229 |
| PpsI | GAGTC | 2 cut(s) | 504, 2229 |
| PpuMI | RGGWCCY | 1 cut(s) | 953 |
| PshBI | ATTAAT | 1 cut(s) | 408 |
| Psp5II | RGGWCCY | 1 cut(s) | 953 |
| Psp6I | CCWGG | 1 cut(s) | 2090 |
| PspGI | CCWGG | 1 cut(s) | 2090 |
| PspN4I | GGNNCC | 4 cut(s) | 341, 436, 1605, 2076 |
| PspPI | GGNCC | 2 cut(s) | 953, 1603 |
| PspPPI | RGGWCCY | 1 cut(s) | 953 |
| PspXI | VCTCGAGB | 1 cut(s) | 1554 |
| PstI | CTGCAG | 1 cut(s) | 1795 |
| PsuI | RGATCY | 1 cut(s) | 1366 |
| PvuI | CGATCG | 1 cut(s) | 788 |
| PvuII | CAGCTG | 1 cut(s) | 1340 |
| RsaI | GTAC | 2 cut(s) | 334, 1282 |
| RsaNI | GTAC | 2 cut(s) | 333, 1281 |
| SacII | CCGCGG | 1 cut(s) | 453 |
| SapI | GCTCTTC | 1 cut(s) | 1684 |
| SaqAI | TTAA | 8 cut(s) | 408, 606, 881, 924, 1460, 1622, 1709, 1749 |
| SatI | GCNGC | 9 cut(s) | 438, 450, 792, 1149, 1200, 1203, 1234, 1779, 1791 |
| Sau3AI | GATC | 8 cut(s) | 268, 741, 785, 919, 1366, 1813, 1986, 2181 |
| Sau96I | GGNCC | 2 cut(s) | 953, 1603 |
| SchI | GAGTC | 2 cut(s) | 505, 2230 |
| ScrFI | CCNGG | 1 cut(s) | 2092 |
| SfaNI | GCATC | 9 cut(s) | 273, 661, 859, 1035, 1135, 1164, 1618, 1816, 2107 |
| SfcI | CTRYAG | 4 cut(s) | 423, 1335, 1506, 1791 |
| Sfr274I | CTCGAG | 2 cut(s) | 1554, 1892 |
| Sfr303I | CCGCGG | 1 cut(s) | 453 |
| SfuI | TTCGAA | 1 cut(s) | 1323 |
| SgrBI | CCGCGG | 1 cut(s) | 453 |
| SinI | GGWCC | 2 cut(s) | 953, 1603 |
| SlaI | CTCGAG | 2 cut(s) | 1554, 1892 |
| SmiI | ATTTAAAT | 1 cut(s) | 607 |
| SmlI | CTYRAG | 5 cut(s) | 457, 493, 685, 1554, 1892 |
| SmoI | CTYRAG | 5 cut(s) | 457, 493, 685, 1554, 1892 |
| SspI | AATATT | 1 cut(s) | 54 |
| SspMI | CTAG | 5 cut(s) | 227, 1286, 1424, 1443, 1683 |
| StyD4I | CCNGG | 1 cut(s) | 2090 |
| StyI | CCWWGG | 3 cut(s) | 351, 1354, 1692 |
| SwaI | ATTTAAAT | 1 cut(s) | 607 |
| TaaI | ACNGT | 8 cut(s) | 251, 680, 1005, 1102, 1966, 1983, 2189, 2234 |
| TaiI | ACGT | 3 cut(s) | 46, 708, 1173 |
| TaqI | TCGA | 9 cut(s) | 267, 651, 784, 1323, 1555, 1893, 1989, 2061, 2236 |
| TauI | GCSGC | 5 cut(s) | 440, 452, 794, 1151, 1236 |
| TfiI | GAWTC | 2 cut(s) | 469, 1915 |
| Tru1I | TTAA | 8 cut(s) | 408, 606, 881, 924, 1460, 1622, 1709, 1749 |
| Tru9I | TTAA | 8 cut(s) | 408, 606, 881, 924, 1460, 1622, 1709, 1749 |
| TscAI | CASTG | 6 cut(s) | 93, 718, 751, 1105, 1438, 2194 |
| TseFI | GTSAC | 6 cut(s) | 84, 508, 899, 1846, 1857, 2189 |
| TseI | GCWGC | 4 cut(s) | 1199, 1202, 1778, 1790 |
| Tsp45I | GTSAC | 6 cut(s) | 84, 508, 899, 1846, 1857, 2189 |
| TspDTI | ATGAA | 7 cut(s) | 323, 434, 808, 1485, 1652, 1919, 1958 |
| TspRI | CASTG | 6 cut(s) | 93, 718, 751, 1105, 1438, 2194 |
| VpaK11BI | GGWCC | 2 cut(s) | 953, 1603 |
| VspI | ATTAAT | 1 cut(s) | 408 |
| XapI | RAATTY | 8 cut(s) | 534, 608, 647, 1403, 1686, 1991, 2048, 2200 |
| XbaI | TCTAGA | 3 cut(s) | 1423, 1442, 1682 |
| XceI | RCATGY | 2 cut(s) | 1473, 2087 |
| XhoI | CTCGAG | 2 cut(s) | 1554, 1892 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1004 |
| XspI | CTAG | 5 cut(s) | 227, 1286, 1424, 1443, 1683 |
| Zsp2I | ATGCAT | 1 cut(s) | 1471 |