Rw0G023980
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig01103
Physical Location & Seq
Reverse (-)
153828 .. 161735
7908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G023980.1

Sequence Viewer

Length: 1554 bp
ATGGCCGGATCAGAAAAAGGACATGCAATTGGAATAGATCTCGGGACAACGTACTTTTGTGTGGCAGTGTGGCAGCACGATCATGTAGAAGTCATCGTTAATGATCAAGGAAACAGGACTACTCCATCTTGTGTTGCCTTCACTGATACTGATCAGTTGGTTGGAGAGGCAGCATTTAACCAGGTCATGAGAAATCCCATAAACTCTATCTTTGATTCAAAGCGGTTAATTGGTAGGAGATTCAGTGACACCTTGGTTCAAAGTGACATGAAGCTCTGGCCATTCAAGGTAATTGGAGGTCCTAGTGATAAGCCTCTGATTGTGGTTACCCACAAAGGCAGGGAGAAATATTTTGCTGCTGAAGAAATCTCATCTATGGTTATTGCAAAGATGCCTGAAATTGCTGAAGCTTACCTTGGATCAACTGTGGATAATGCTGTCATCACTGTCCCTGCTTACTTCAATAACTCCCAACGTGAGGCTACCAAACATGCTGGCGTTAGAGCTGGCCTAAAGGTGATGCGTATTATTAACGAACCAACTGCTGCAGCCATTGCTTATGGCCTTGACAACAAGGCAGGGACTTTAGATGTGTCAGTACTTACCATAGGGGATGGTGTCTTTGAAGTGAAAGCCACTGCTGGAGATACACACCTTGGAGGTGAAGACTTCGACAACAAAATGGTTAACTACTGCGTCGAACAATTCAAGAGGAAGCATGATTTGGACGTCAGCGGACACTCAAAGGCTCTTAGAAAGTTAAGAAGTGCCTGTGAAAAGGCAAAGAGAAGACTTTCGTTTACGTATACAACTGACATTGAAATTGATAGTCTGCATCAAGGTATTGACTTCTATGTAACTTTTACCCGTGCCAAATTTGAACAACTCAACAATGATTTCTTCTTTAAGTGTATGGAGCCTGTAATTAAGTGTTTGAGGGATGCTAAAATGGAAATAAGCAGTGTGGATGATGTTGTTCTTGCCGGTGGGTCTTCTCGAATCCCCAAGGTGCAACAACTATTACAGAATGTGTTCATGGGGAAGGAGCTGTGCAAGAGCCTCAACCCTGATGAGGCTATAGCACATGGTGCCGCTGTTCAGGCTGCAGTTTTGAATGGTAAGAATGTACCTGGGAAACTTCAAGACTTCACTCTATTGGATGTCACCCCTCTGTCACTTGGGGTGGGGAGTGCCAAAGTTTCCAAAGATGGTAGTTTGGAGCCGTTCATGAATGTCTTGATTCCAAGAAACTCGAGAATTCCCCTGAGGAAGAGAGATGGTGTTACTACTGTTATTGACAACCAACCTTTTGTCAGCTTTCCCATTTATGAGGGTGAGAGTAGAATACCCAGAGATAATAACTTTTTGGGTAAGCTTAAGCTTGATGACATTGCTCCAGCTCCCAGCGGAGTTCCCAGAATTTATATCTTCTTTGATATTGATGCCAATGGTATCCTGAGTATATCAGCTGAGGACATGTCCACTGGCCAAAAGAAAGAGATTACGATCAACAGTGACAGAAGAACCAGTGAAGGAATTGAGCCAGTGAAGTAA
Functional Annotation

Protein Analysis

517

Amino Acids

56.81

Weight (kDa)

6.4

Isoelectric Point (pI)

37.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 510 1.9e-184 Hsp70 protein
MreB_Mbl PF06723 142 - 366 1.3e-10 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 732
AccB1I GGYRCC 1 cut(s) 1088
AccI GTMKAC 1 cut(s) 806
AciI CCGC 4 cut(s) 223, 735, 1092, 1407
AclWI GGATC 2 cut(s) 16, 427
AcoI YGGCCR 3 cut(s) 3, 278, 1486
AcsI RAATTY 3 cut(s) 875, 1257, 1419
AcuI CTGAAG 2 cut(s) 381, 426
AcyI GRCGYC 1 cut(s) 729
AdeI CACNNNGTG 1 cut(s) 1088
AfaI GTAC 3 cut(s) 53, 600, 1128
AfiI CCNNNNNNNGG 2 cut(s) 478, 1072
AflII CTTAAG 1 cut(s) 1376
AflIII ACRYGT 1 cut(s) 1476
AjnI CCWGG 2 cut(s) 180, 1129
AjuI GAANNNNNNNTTGG 4 cut(s) 399, 431, 707, 739
AluBI AGCT 9 cut(s) 274, 410, 506, 1048, 1317, 1375, 1381, 1400, 1469
AluI AGCT 9 cut(s) 274, 410, 506, 1048, 1317, 1375, 1381, 1400, 1469
AlwI GGATC 2 cut(s) 16, 427
Ama87I CYCGRG 2 cut(s) 41, 1252
AoxI GGCC 5 cut(s) 3, 278, 508, 562, 1486
ApeKI GCWGC 6 cut(s) 73, 170, 356, 545, 548, 1103
ApoI RAATTY 3 cut(s) 875, 1257, 1419
Asp700I GAANNNNTTC 2 cut(s) 793, 1031
AspS9I GGNCC 1 cut(s) 299
AsuHPI GGTGA 4 cut(s) 529, 674, 1156, 1346
AvaI CYCGRG 2 cut(s) 41, 1252
AvaII GGWCC 1 cut(s) 299
AxyI CCTNAGG 1 cut(s) 1265
BalI TGGCCA 2 cut(s) 280, 1488
BanI GGYRCC 1 cut(s) 1088
BbsI GAAGAC 3 cut(s) 672, 796, 984
BbvCI CCTCAGC 1 cut(s) 1470
BbvI GCAGC 6 cut(s) 85, 182, 343, 532, 560, 1090
BccI CCATC 4 cut(s) 133, 608, 1202, 1271
BceAI ACGGC 1 cut(s) 1207
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 2 cut(s) 182, 1131
BciVI GTATCC 1 cut(s) 1463
BclI TGATCA 2 cut(s) 103, 151
BfaI CTAG 1 cut(s) 303
BfmI CTRYAG 3 cut(s) 546, 1077, 1104
BfrI CTTAAG 1 cut(s) 1376
BfuI GTATCC 1 cut(s) 1463
BglII AGATCT 1 cut(s) 37
BisI GCNGC 7 cut(s) 74, 171, 357, 546, 549, 1092, 1104
BlsI GCNGC 7 cut(s) 75, 172, 358, 547, 550, 1093, 1105
BmcAI AGTACT 1 cut(s) 600
Bme1390I CCNGG 2 cut(s) 182, 1131
Bme18I GGWCC 1 cut(s) 299
BmeT110I CYCGRG 2 cut(s) 41, 1252
BmgT120I GGNCC 1 cut(s) 299
BmiI GGNNCC 3 cut(s) 918, 1090, 1221
BmrFI CCNGG 2 cut(s) 182, 1131
BmsI GCATC 5 cut(s) 381, 510, 844, 931, 1432
BpiI GAAGAC 3 cut(s) 672, 796, 984
BpmI CTGGAG 2 cut(s) 663, 1380
Bpu10I CCTNAGC 1 cut(s) 1470
BsaAI YACGTR 1 cut(s) 804
BsaBI GATNNNNATC 2 cut(s) 150, 1505
BsaHI GRCGYC 1 cut(s) 729
BsaJI CCNNGG 5 cut(s) 252, 415, 655, 1005, 1130
BsaXI ACNNNNNCTCC 2 cut(s) 229, 259
Bsc4I CCNNNNNNNGG 2 cut(s) 478, 1072
Bse118I RCCGGY 1 cut(s) 983
Bse1I ACTGG 3 cut(s) 1489, 1527, 1544
Bse21I CCTNAGG 1 cut(s) 1265
Bse3DI GCAATG 2 cut(s) 552, 1389
Bse8I GATNNNNATC 2 cut(s) 150, 1505
BseBI CCWGG 2 cut(s) 182, 1131
BseDI CCNNGG 5 cut(s) 252, 415, 655, 1005, 1130
BseGI GGATG 4 cut(s) 619, 946, 973, 1165
BseJI GATNNNNATC 2 cut(s) 150, 1505
BseLI CCNNNNNNNGG 2 cut(s) 478, 1072
BseMI GCAATG 2 cut(s) 552, 1389
BseMII CTCAG 3 cut(s) 1256, 1448, 1461
BseNI ACTGG 3 cut(s) 1489, 1527, 1544
BseXI GCAGC 6 cut(s) 85, 182, 343, 532, 560, 1090
BseYI CCCAGC 1 cut(s) 1403
BshFI GGCC 5 cut(s) 5, 280, 510, 564, 1488
BshNI GGYRCC 1 cut(s) 1088
BsiHKCI CYCGRG 2 cut(s) 41, 1252
BsiSI CCGG 2 cut(s) 6, 984
BslFI GGGAC 3 cut(s) 58, 434, 595
BslI CCNNNNNNNGG 2 cut(s) 478, 1072
BsmFI GGGAC 3 cut(s) 58, 434, 595
BsnI GGCC 5 cut(s) 5, 280, 510, 564, 1488
BsoBI CYCGRG 2 cut(s) 41, 1252
Bsp143I GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
BspACI CCGC 4 cut(s) 223, 735, 1092, 1407
BspANI GGCC 5 cut(s) 5, 280, 510, 564, 1488
BspCNI CTCAG 3 cut(s) 1257, 1449, 1462
BspHI TCATGA 2 cut(s) 186, 1227
BspLI GGNNCC 3 cut(s) 918, 1090, 1221
BspMAI CTGCAG 2 cut(s) 550, 1108
BspPI GGATC 2 cut(s) 16, 427
BspT107I GGYRCC 1 cut(s) 1088
BspTI CTTAAG 1 cut(s) 1376
BsrDI GCAATG 2 cut(s) 552, 1389
BsrFI RCCGGY 1 cut(s) 983
BsrI ACTGG 3 cut(s) 1489, 1527, 1544
BssAI RCCGGY 1 cut(s) 983
BssECI CCNNGG 5 cut(s) 252, 415, 655, 1005, 1130
BssMI GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
BssNAI GTATAC 1 cut(s) 807
BssNI GRCGYC 1 cut(s) 729
BssT1I CCWWGG 4 cut(s) 252, 415, 655, 1005
Bst1107I GTATAC 1 cut(s) 807
Bst2UI CCWGG 2 cut(s) 182, 1131
Bst4CI ACNGT 4 cut(s) 427, 448, 1291, 1514
Bst6I CTCTTC 1 cut(s) 1265
BstACI GRCGYC 1 cut(s) 729
BstAFI CTTAAG 1 cut(s) 1376
BstAPI GCANNNNNTGC 2 cut(s) 554, 1088
BstBAI YACGTR 1 cut(s) 804
BstC8I GCNNGC 2 cut(s) 496, 508
BstDEI CTNAG 4 cut(s) 752, 1265, 1457, 1470
BstEII GGTNACC 1 cut(s) 325
BstF5I GGATG 4 cut(s) 619, 946, 973, 1165
BstKTI GATC 7 cut(s) 11, 40, 82, 106, 154, 422, 1509
BstMBI GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
BstMWI GCNNNNNNNGC 3 cut(s) 554, 1088, 1100
BstNI CCWGG 2 cut(s) 182, 1131
BstNSI RCATGY 3 cut(s) 26, 494, 1480
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 2 cut(s) 180, 1129
BstSFI CTRYAG 3 cut(s) 546, 1077, 1104
BstSNI TACGTA 1 cut(s) 804
BstV1I GCAGC 6 cut(s) 85, 182, 343, 532, 560, 1090
BstV2I GAAGAC 3 cut(s) 672, 796, 984
BstX2I RGATCY 1 cut(s) 37
BstYI RGATCY 1 cut(s) 37
BstZ17I GTATAC 1 cut(s) 807
Bsu36I CCTNAGG 1 cut(s) 1265
BsuI GTATCC 1 cut(s) 1463
BsuRI GGCC 5 cut(s) 5, 280, 510, 564, 1488
BtsCI GGATG 4 cut(s) 619, 946, 973, 1165
BtsI GCAGTG 3 cut(s) 72, 636, 967
Cac8I GCNNGC 2 cut(s) 496, 508
CciI TCATGA 2 cut(s) 186, 1227
Cfr10I RCCGGY 1 cut(s) 983
Cfr13I GGNCC 1 cut(s) 299
CseI GACGC 1 cut(s) 685
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 3 cut(s) 52, 599, 1127
CviQI GTAC 3 cut(s) 52, 599, 1127
DdeI CTNAG 4 cut(s) 752, 1265, 1457, 1470
DpnI GATC 7 cut(s) 10, 39, 81, 105, 153, 421, 1508
DpnII GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
DraIII CACNNNGTG 1 cut(s) 1088
EaeI YGGCCR 3 cut(s) 3, 278, 1486
Eam1104I CTCTTC 1 cut(s) 1265
EarI CTCTTC 1 cut(s) 1265
Eco105I TACGTA 1 cut(s) 804
Eco130I CCWWGG 4 cut(s) 252, 415, 655, 1005
Eco47I GGWCC 1 cut(s) 299
Eco57I CTGAAG 2 cut(s) 381, 426
Eco81I CCTNAGG 1 cut(s) 1265
Eco88I CYCGRG 2 cut(s) 41, 1252
Eco91I GGTNACC 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 299
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 1 cut(s) 1257
EcoRII CCWGG 2 cut(s) 180, 1129
EcoT14I CCWWGG 4 cut(s) 252, 415, 655, 1005
ErhI CCWWGG 4 cut(s) 252, 415, 655, 1005
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 3 cut(s) 58, 434, 595
FbaI TGATCA 2 cut(s) 103, 151
FblI GTMKAC 1 cut(s) 806
Fnu4HI GCNGC 7 cut(s) 74, 171, 357, 546, 549, 1092, 1104
FokI GGATG 4 cut(s) 626, 953, 980, 1172
Fsp4HI GCNGC 7 cut(s) 74, 171, 357, 546, 549, 1092, 1104
FspBI CTAG 1 cut(s) 303
GluI GCNGC 7 cut(s) 74, 171, 357, 546, 549, 1092, 1104
GsaI CCCAGC 1 cut(s) 1407
GsuI CTGGAG 2 cut(s) 663, 1380
HaeIII GGCC 5 cut(s) 5, 280, 510, 564, 1488
HapII CCGG 2 cut(s) 6, 984
HgaI GACGC 1 cut(s) 685
Hin1I GRCGYC 1 cut(s) 729
HincII GTYRAC 1 cut(s) 688
HindII GTYRAC 1 cut(s) 688
HindIII AAGCTT 3 cut(s) 408, 1373, 1379
HinfI GANTC 4 cut(s) 215, 240, 999, 1240
HpaI GTTAAC 1 cut(s) 688
HpaII CCGG 2 cut(s) 6, 984
HphI GGTGA 4 cut(s) 529, 674, 1156, 1346
Hpy166II GTNNAC 4 cut(s) 688, 801, 807, 1482
Hpy188I TCNGA 2 cut(s) 13, 318
Hpy188III TCNNGA 9 cut(s) 43, 187, 709, 996, 1142, 1228, 1237, 1254, 1456
Hpy8I GTNNAC 4 cut(s) 688, 801, 807, 1482
Hpy99I CGWCG 1 cut(s) 701
HpyAV CCTTC 3 cut(s) 148, 1036, 1526
HpyCH4III ACNGT 4 cut(s) 427, 448, 1291, 1514
HpyCH4IV ACGT 4 cut(s) 50, 475, 729, 803
HpyCH4V TGCA 7 cut(s) 26, 386, 548, 835, 1012, 1053, 1106
HpyF10VI GCNNNNNNNGC 3 cut(s) 554, 1088, 1100
HpyF3I CTNAG 4 cut(s) 752, 1265, 1457, 1470
HpySE526I ACGT 4 cut(s) 50, 475, 729, 803
Hsp92I GRCGYC 1 cut(s) 729
Ksp22I TGATCA 2 cut(s) 103, 151
KspAI GTTAAC 1 cut(s) 688
Kzo9I GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
LmnI GCTCC 5 cut(s) 916, 1045, 1219, 1399, 1405
Lsp1109I GCAGC 6 cut(s) 85, 182, 343, 532, 560, 1090
LweI GCATC 5 cut(s) 381, 510, 844, 931, 1432
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 1 cut(s) 303
MaeII ACGT 4 cut(s) 50, 475, 729, 803
MaeIII GTNAC 8 cut(s) 245, 263, 325, 856, 1162, 1173, 1282, 1514
MalI GATC 7 cut(s) 10, 39, 81, 105, 153, 421, 1508
MboI GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
MboII GAAGA 8 cut(s) 374, 677, 801, 892, 984, 1282, 1420, 1533
MfeI CAATTG 1 cut(s) 27
MflI RGATCY 1 cut(s) 37
MlsI TGGCCA 2 cut(s) 280, 1488
MluNI TGGCCA 2 cut(s) 280, 1488
MmeI TCCRAC 1 cut(s) 142
Mox20I TGGCCA 2 cut(s) 280, 1488
MroXI GAANNNNTTC 2 cut(s) 793, 1031
MscI TGGCCA 2 cut(s) 280, 1488
MseI TTAA 9 cut(s) 99, 177, 227, 531, 687, 761, 906, 927, 1377
MslI CAYNNNNRTG 1 cut(s) 81
Msp20I TGGCCA 2 cut(s) 280, 1488
MspA1I CMGCKG 4 cut(s) 735, 1094, 1407, 1469
MspCI CTTAAG 1 cut(s) 1376
MspI CCGG 2 cut(s) 6, 984
MspR9I CCNGG 2 cut(s) 182, 1131
MunI CAATTG 1 cut(s) 27
MvaI CCWGG 2 cut(s) 182, 1131
MwoI GCNNNNNNNGC 3 cut(s) 554, 1088, 1100
NdeII GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
NlaIV GGNNCC 3 cut(s) 918, 1090, 1221
NmuCI GTSAC 5 cut(s) 245, 263, 1162, 1173, 1514
NspI RCATGY 3 cut(s) 26, 494, 1480
PaeR7I CTCGAG 1 cut(s) 1252
PagI TCATGA 2 cut(s) 186, 1227
PciI ACATGT 1 cut(s) 1476
PdmI GAANNNNTTC 2 cut(s) 793, 1031
PfeI GAWTC 4 cut(s) 215, 240, 999, 1240
PkrI GCNGC 7 cut(s) 75, 172, 358, 547, 550, 1093, 1105
Ppu21I YACGTR 1 cut(s) 804
PpuMI RGGWCCY 1 cut(s) 299
PscI ACATGT 1 cut(s) 1476
Psp5II RGGWCCY 1 cut(s) 299
Psp6I CCWGG 2 cut(s) 180, 1129
PspEI GGTNACC 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 1403
PspGI CCWGG 2 cut(s) 180, 1129
PspN4I GGNNCC 3 cut(s) 918, 1090, 1221
PspPI GGNCC 1 cut(s) 299
PspPPI RGGWCCY 1 cut(s) 299
PstI CTGCAG 2 cut(s) 550, 1108
PsuI RGATCY 1 cut(s) 37
PvuII CAGCTG 1 cut(s) 1469
RsaI GTAC 3 cut(s) 53, 600, 1128
RsaNI GTAC 3 cut(s) 52, 599, 1127
RseI CAYNNNNRTG 1 cut(s) 81
SaqAI TTAA 9 cut(s) 99, 177, 227, 531, 687, 761, 906, 927, 1377
SatI GCNGC 7 cut(s) 74, 171, 357, 546, 549, 1092, 1104
Sau3AI GATC 7 cut(s) 8, 37, 79, 103, 151, 419, 1506
Sau96I GGNCC 1 cut(s) 299
ScaI AGTACT 1 cut(s) 600
ScrFI CCNGG 2 cut(s) 182, 1131
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 5 cut(s) 381, 510, 844, 931, 1432
SfcI CTRYAG 3 cut(s) 546, 1077, 1104
Sfr274I CTCGAG 1 cut(s) 1252
SinI GGWCC 1 cut(s) 299
SlaI CTCGAG 1 cut(s) 1252
SmiMI CAYNNNNRTG 1 cut(s) 81
SmlI CTYRAG 2 cut(s) 1252, 1376
SmoI CTYRAG 2 cut(s) 1252, 1376
SnaBI TACGTA 1 cut(s) 804
SsiI CCGC 4 cut(s) 223, 735, 1092, 1407
SspI AATATT 1 cut(s) 350
SspMI CTAG 1 cut(s) 303
StyD4I CCNGG 2 cut(s) 180, 1129
StyI CCWWGG 4 cut(s) 252, 415, 655, 1005
TaaI ACNGT 4 cut(s) 427, 448, 1291, 1514
TaiI ACGT 4 cut(s) 53, 478, 732, 806
TaqI TCGA 4 cut(s) 672, 699, 997, 1253
TatI WGTACW 1 cut(s) 598
TauI GCSGC 1 cut(s) 1094
TfiI GAWTC 4 cut(s) 215, 240, 999, 1240
Tru1I TTAA 9 cut(s) 99, 177, 227, 531, 687, 761, 906, 927, 1377
Tru9I TTAA 9 cut(s) 99, 177, 227, 531, 687, 761, 906, 927, 1377
TseFI GTSAC 5 cut(s) 245, 263, 1162, 1173, 1514
TseI GCWGC 6 cut(s) 73, 170, 356, 545, 548, 1103
Tsp45I GTSAC 5 cut(s) 245, 263, 1162, 1173, 1514
TspDTI ATGAA 4 cut(s) 284, 1024, 1216, 1244
Vha464I CTTAAG 1 cut(s) 1376
VpaK11BI GGWCC 1 cut(s) 299
XapI RAATTY 3 cut(s) 875, 1257, 1419
XceI RCATGY 3 cut(s) 26, 494, 1480
XhoI CTCGAG 1 cut(s) 1252
XmiI GTMKAC 1 cut(s) 806
XmnI GAANNNNTTC 2 cut(s) 793, 1031
XspI CTAG 1 cut(s) 303
ZraI GACGTC 1 cut(s) 730
ZrmI AGTACT 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.