RLG00000027326
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
10648374 .. 10652783
4410 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027326

Sequence Viewer

Length: 1518 bp
ATGAAGCTCTGGCCATTCAAGGTTACTAAAGGTCCCGAGGACAAGCCTATGATTGTGGTTACGCAGGAGGGTAAACAAAAAAGGTTTGCTGCAGACGAAATCTCATCCATGGTTCTTGCAAAGATGCGGGAGTTTGCTGAGGCCTACCTCGGCTCAACTGTGAAGAACGCAGTTATCACTGTCCCTGCATACTTCAATAATTTACAGCGGCAGGCTACATATGATGCAGGTACTACTGCTGGGCTTAATGTGATGCGTATAATAAATGAACCAACTGCAGCAGCAATTGCTTATGGCCTTAACAAGAAAGCTGGCTGGTATGGCAAGACAAATGTGGTAATATTTGATTTGGCCGGTGATACTTTAGATGTGTCGTTGCTTAGCATAGGGGATGATGTTTTTGAAGTGAAGGCCACTGCTGGAGACACTCATCTCGGAGGTGAAGACTTTGATAACAAAATGGTGAATTATTGCGTTGAGGAATTTAAGAGGAAGCATCAATTGGACGTCAGTGGTAACACCAGAGCTCTAAGGAGGATAAGAAATGCATGTGAAAAGGCAAAGAAGAGGCTCTCATTTGCTTGTTCTGTTGACATTGAACTTGATTGTTTGTTCTTGAATACTGATTTCTATATAACATTTACTCGCGAAAATTTTGAACACATCAACATGGATTTGTTTAACGAGTGTGTGAAGCCAGTGGAGAAGTGTTTGAGGGATGCTAAAATGGACACAAGCAGTGTTGATGATATTGTTCTTATTGGTGGCTCTTCTAGAATTCCCAAGGTGCAGCAGCTATTGCAGGATGTGTTAAAAGGGAAGGAGCTTTGCAGAGGAATAAATCCTGAAGAGGCTGTGGCTTATGGTGCAGCTGTTCAAGCAGCAGTCTTGAATGGGAATGGAAATGGAACTGGAAAGCTTAAAGATTTCACTCTCATGGATGTCACCCCAATGTCCCTTGGGGTTAGGACTGAGTGTGAGACTTCTGGGGATTCTAATATTATGACTGTTGTGATACCAAGAAATACTAGAATTCCAGTCATAAAGAACGAAACTTTTGCCACTTCCGTAGACAACCAAATTTCGGCCCCATTTACTATCTTCGAGGGCGAGAGTGAAACAACCTTAAACAATAATCGTCTGGGTGAATTTGTCCTTCATGACCTTCCTTCAGCTCCCAAGGGTGCTGTTGAGTTCAATGTTTACTTTGATATTGATGCAAATGGTATCTTGAGTGTCTCTGCTGAAGAGAAATCTACAGGCAAGACAAAAGAGATTGCAATTACTTGTGACAGAAGAACATTAAGGATTGAGAAGATGAGGTCTGGTGGTTTGCTCTTCACCTTGGTCTCTACATCGATTGGGGGCGGTCGATGTGGGATTGAGTCAGCGGTGGTTCTGGCGGTGGGACTGGAATGGGAGTCTGTTGTTTCTAACCCAGAGCCAACTGTGCATCTGGATTCGGATTTGGGATCCGGGTGGAATCTGCAACAGGATTCGGATTTGGGATCTGGGTGA
Functional Annotation

Protein Analysis

506

Amino Acids

55.16

Weight (kDa)

5.13

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 1 - 433 7.2e-156 Hsp70 protein
MreB_Mbl PF06723 53 - 292 3.1e-15 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 510
Acc36I ACCTGC 1 cut(s) 218
AccI GTMKAC 1 cut(s) 1071
AccII CGCG 1 cut(s) 648
AciI CCGC 5 cut(s) 127, 208, 1368, 1391, 1403
AclWI GGATC 3 cut(s) 1467, 1480, 1516
AcoI YGGCCR 2 cut(s) 11, 351
AcsI RAATTY 6 cut(s) 482, 652, 777, 1032, 1080, 1148
AcuI CTGAAG 3 cut(s) 867, 1155, 1266
AcyI GRCGYC 1 cut(s) 507
AfaI GTAC 1 cut(s) 232
AfiI CCNNNNNNNGG 1 cut(s) 1084
AgsI TTSAA 9 cut(s) 19, 196, 404, 599, 619, 659, 878, 892, 1198
AjuI GAANNNNNNNTTGG 2 cut(s) 485, 517
AluBI AGCT 8 cut(s) 7, 311, 527, 796, 826, 872, 919, 1175
AluI AGCT 8 cut(s) 7, 311, 527, 796, 826, 872, 919, 1175
Alw21I GWGCWC 1 cut(s) 529
Alw26I GTCTC 4 cut(s) 417, 974, 1243, 1354
AlwI GGATC 3 cut(s) 1467, 1480, 1516
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 6 cut(s) 11, 141, 295, 351, 411, 1086
ApeKI GCWGC 7 cut(s) 89, 278, 281, 790, 793, 869, 881
ApoI RAATTY 6 cut(s) 482, 652, 777, 1032, 1080, 1148
AspS9I GGNCC 2 cut(s) 32, 1087
AsuC2I CCSGG 1 cut(s) 1477
AsuHPI GGTGA 6 cut(s) 368, 452, 475, 937, 1157, 1333
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 13
BamHI GGATCC 1 cut(s) 1472
BanII GRGCYC 1 cut(s) 529
BbsI GAAGAC 1 cut(s) 450
Bbv12I GWGCWC 1 cut(s) 529
BbvCI CCTCAGC 1 cut(s) 138
BbvI GCAGC 7 cut(s) 76, 290, 293, 802, 805, 881, 893
BcgI CGANNNNNNTGC 2 cut(s) 1040, 1074
BcnI CCSGG 1 cut(s) 1477
BcoDI GTCTC 4 cut(s) 417, 974, 1243, 1354
BfaI CTAG 2 cut(s) 774, 1029
BfmI CTRYAG 3 cut(s) 90, 276, 1257
BfuAI ACCTGC 1 cut(s) 218
BisI GCNGC 8 cut(s) 90, 209, 279, 282, 791, 794, 870, 882
BlpI GCTNAGC 1 cut(s) 380
BlsI GCNGC 8 cut(s) 91, 210, 280, 283, 792, 795, 871, 883
Bme1390I CCNGG 1 cut(s) 1477
Bme18I GGWCC 1 cut(s) 32
BmeT110I CYCGRG 1 cut(s) 35
BmgT120I GGNCC 2 cut(s) 32, 1087
BmiI GGNNCC 3 cut(s) 34, 1089, 1474
BmrFI CCNGG 1 cut(s) 1477
BmsI GCATC 7 cut(s) 114, 214, 243, 505, 709, 1207, 1462
BpiI GAAGAC 1 cut(s) 450
BpmI CTGGAG 1 cut(s) 441
Bpu10I CCTNAGC 1 cut(s) 138
Bpu1102I GCTNAGC 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 1252
BpuMI CCSGG 1 cut(s) 1477
Bsa29I ATCGAT 1 cut(s) 1358
BsaHI GRCGYC 1 cut(s) 507
BsaI GGTCTC 1 cut(s) 1354
BsaJI CCNNGG 7 cut(s) 36, 108, 148, 783, 958, 1179, 1344
Bsc4I CCNNNNNNNGG 1 cut(s) 1084
Bse118I RCCGGY 1 cut(s) 353
Bse1I ACTGG 4 cut(s) 698, 916, 1037, 1416
BseCI ATCGAT 1 cut(s) 1358
BseDI CCNNGG 7 cut(s) 36, 108, 148, 783, 958, 1179, 1344
BseGI GGATG 5 cut(s) 104, 397, 724, 811, 946
BseLI CCNNNNNNNGG 1 cut(s) 1084
BseMII CTCAG 2 cut(s) 129, 963
BseNI ACTGG 4 cut(s) 698, 916, 1037, 1416
BseXI GCAGC 7 cut(s) 76, 290, 293, 802, 805, 881, 893
BseYI CCCAGC 1 cut(s) 239
BsgI GTGCAG 2 cut(s) 809, 888
Bsh1236I CGCG 1 cut(s) 648
Bsh1285I CGRYCG 1 cut(s) 1372
BshFI GGCC 6 cut(s) 13, 143, 297, 353, 413, 1088
BshVI ATCGAT 1 cut(s) 1358
BsiEI CGRYCG 1 cut(s) 1372
BsiHKAI GWGCWC 1 cut(s) 529
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 2 cut(s) 354, 1476
BslFI GGGAC 4 cut(s) 18, 167, 940, 1422
BslI CCNNNNNNNGG 1 cut(s) 1084
BsmAI GTCTC 4 cut(s) 417, 974, 1243, 1354
BsmFI GGGAC 4 cut(s) 18, 167, 940, 1422
BsnI GGCC 6 cut(s) 13, 143, 297, 353, 413, 1088
Bso31I GGTCTC 1 cut(s) 1354
BsoBI CYCGRG 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 529
Bsp143I GATC 2 cut(s) 1472, 1508
Bsp1720I GCTNAGC 1 cut(s) 380
Bsp19I CCATGG 1 cut(s) 108
Bsp68I TCGCGA 1 cut(s) 648
BspACI CCGC 5 cut(s) 127, 208, 1368, 1391, 1403
BspANI GGCC 6 cut(s) 13, 143, 297, 353, 413, 1088
BspCNI CTCAG 2 cut(s) 130, 964
BspDI ATCGAT 1 cut(s) 1358
BspFNI CGCG 1 cut(s) 648
BspHI TCATGA 1 cut(s) 1159
BspLI GGNNCC 3 cut(s) 34, 1089, 1474
BspMAI CTGCAG 2 cut(s) 94, 280
BspMI ACCTGC 1 cut(s) 218
BspPI GGATC 3 cut(s) 1467, 1480, 1516
BspQI GCTCTTC 2 cut(s) 775, 1343
BspTNI GGTCTC 1 cut(s) 1354
BsrFI RCCGGY 1 cut(s) 353
BsrI ACTGG 4 cut(s) 698, 916, 1037, 1416
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 7 cut(s) 36, 108, 148, 783, 958, 1179, 1344
BssMI GATC 2 cut(s) 1472, 1508
BssNI GRCGYC 1 cut(s) 507
BssT1I CCWWGG 5 cut(s) 108, 783, 958, 1179, 1344
Bst4CI ACNGT 4 cut(s) 160, 181, 1009, 1450
Bst6I CTCTTC 5 cut(s) 560, 775, 843, 1242, 1343
BstACI GRCGYC 1 cut(s) 507
BstAPI GCANNNNNTGC 2 cut(s) 287, 799
BstC8I GCNNGC 2 cut(s) 213, 313
BstDEI CTNAG 4 cut(s) 138, 380, 530, 972
BstDSI CCRYGG 1 cut(s) 108
BstF5I GGATG 5 cut(s) 104, 397, 724, 811, 946
BstFNI CGCG 1 cut(s) 648
BstKTI GATC 2 cut(s) 1475, 1511
BstMAI GTCTC 4 cut(s) 417, 974, 1243, 1354
BstMBI GATC 2 cut(s) 1472, 1508
BstMCI CGRYCG 1 cut(s) 1372
BstMWI GCNNNNNNNGC 6 cut(s) 287, 321, 799, 866, 878, 1450
BstNSI RCATGY 1 cut(s) 552
BstSCI CCNGG 1 cut(s) 1475
BstSFI CTRYAG 3 cut(s) 90, 276, 1257
BstUI CGCG 1 cut(s) 648
BstV1I GCAGC 7 cut(s) 76, 290, 293, 802, 805, 881, 893
BstV2I GAAGAC 1 cut(s) 450
BstX2I RGATCY 2 cut(s) 1472, 1508
BstYI RGATCY 2 cut(s) 1472, 1508
Bsu15I ATCGAT 1 cut(s) 1358
BsuRI GGCC 6 cut(s) 13, 143, 297, 353, 413, 1088
BsuTUI ATCGAT 1 cut(s) 1358
BtgI CCRYGG 1 cut(s) 108
BtsCI GGATG 5 cut(s) 104, 397, 724, 811, 946
BtsI GCAGTG 2 cut(s) 414, 745
BtsIMutI CAGTG 5 cut(s) 177, 414, 517, 705, 745
BtuMI TCGCGA 1 cut(s) 648
BveI ACCTGC 1 cut(s) 218
Cac8I GCNNGC 2 cut(s) 213, 313
CciI TCATGA 1 cut(s) 1159
Cfr10I RCCGGY 1 cut(s) 353
Cfr13I GGNCC 2 cut(s) 32, 1087
ClaI ATCGAT 1 cut(s) 1358
Csp6I GTAC 1 cut(s) 231
CviAII CATG 5 cut(s) 109, 549, 670, 937, 1160
CviQI GTAC 1 cut(s) 231
DdeI CTNAG 4 cut(s) 138, 380, 530, 972
DpnI GATC 2 cut(s) 1474, 1510
DpnII GATC 2 cut(s) 1472, 1508
EaeI YGGCCR 2 cut(s) 11, 351
Eam1104I CTCTTC 5 cut(s) 560, 775, 843, 1242, 1343
EarI CTCTTC 5 cut(s) 560, 775, 843, 1242, 1343
Ecl136II GAGCTC 1 cut(s) 527
Eco130I CCWWGG 5 cut(s) 108, 783, 958, 1179, 1344
Eco147I AGGCCT 1 cut(s) 143
Eco24I GRGCYC 1 cut(s) 529
Eco31I GGTCTC 1 cut(s) 1354
Eco47I GGWCC 1 cut(s) 32
Eco53kI GAGCTC 1 cut(s) 527
Eco57I CTGAAG 3 cut(s) 867, 1155, 1266
Eco88I CYCGRG 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 527
EcoO109I RGGNCCY 1 cut(s) 32
EcoRI GAATTC 2 cut(s) 777, 1032
EcoT14I CCWWGG 5 cut(s) 108, 783, 958, 1179, 1344
EcoT22I ATGCAT 1 cut(s) 550
EcoT38I GRGCYC 1 cut(s) 529
ErhI CCWWGG 5 cut(s) 108, 783, 958, 1179, 1344
FaeI CATG 5 cut(s) 112, 552, 673, 940, 1163
FaqI GGGAC 4 cut(s) 18, 167, 940, 1422
FatI CATG 5 cut(s) 108, 548, 669, 936, 1159
FauI CCCGC 1 cut(s) 120
FauNDI CATATG 1 cut(s) 220
FblI GTMKAC 1 cut(s) 1071
Fnu4HI GCNGC 8 cut(s) 90, 209, 279, 282, 791, 794, 870, 882
FokI GGATG 5 cut(s) 91, 404, 731, 818, 953
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 8 cut(s) 90, 209, 279, 282, 791, 794, 870, 882
FspBI CTAG 2 cut(s) 774, 1029
GluI GCNGC 8 cut(s) 90, 209, 279, 282, 791, 794, 870, 882
GsaI CCCAGC 1 cut(s) 243
GsuI CTGGAG 1 cut(s) 441
HaeIII GGCC 6 cut(s) 13, 143, 297, 353, 413, 1088
HapII CCGG 2 cut(s) 354, 1476
Hin1I GRCGYC 1 cut(s) 507
Hin1II CATG 5 cut(s) 112, 552, 673, 940, 1163
HincII GTYRAC 1 cut(s) 592
HindII GTYRAC 1 cut(s) 592
HindIII AAGCTT 1 cut(s) 917
HinfI GANTC 6 cut(s) 992, 1385, 1421, 1460, 1483, 1496
HpaII CCGG 2 cut(s) 354, 1476
HphI GGTGA 6 cut(s) 368, 452, 475, 937, 1157, 1333
Hpy166II GTNNAC 4 cut(s) 74, 592, 1072, 1204
Hpy188I TCNGA 3 cut(s) 437, 1465, 1501
Hpy188III TCNNGA 9 cut(s) 35, 616, 647, 774, 845, 889, 1160, 1231, 1457
Hpy8I GTNNAC 4 cut(s) 74, 592, 1072, 1204
HpyAV CCTTC 5 cut(s) 403, 814, 1166, 1175, 1179
HpyCH4III ACNGT 4 cut(s) 160, 181, 1009, 1450
HpyCH4IV ACGT 1 cut(s) 507
HpyF10VI GCNNNNNNNGC 6 cut(s) 287, 321, 799, 866, 878, 1450
HpyF3I CTNAG 4 cut(s) 138, 380, 530, 972
HpySE526I ACGT 1 cut(s) 507
Hsp92I GRCGYC 1 cut(s) 507
Hsp92II CATG 5 cut(s) 112, 552, 673, 940, 1163
Kzo9I GATC 2 cut(s) 1472, 1508
LguI GCTCTTC 2 cut(s) 775, 1343
LmnI GCTCC 2 cut(s) 823, 1180
Lsp1109I GCAGC 7 cut(s) 76, 290, 293, 802, 805, 881, 893
LweI GCATC 7 cut(s) 114, 214, 243, 505, 709, 1207, 1462
MaeI CTAG 2 cut(s) 774, 1029
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 5 cut(s) 22, 58, 515, 943, 1289
MalI GATC 2 cut(s) 1474, 1510
MboI GATC 2 cut(s) 1472, 1508
MfeI CAATTG 2 cut(s) 285, 500
MflI RGATCY 2 cut(s) 1472, 1508
MhlI GDGCHC 1 cut(s) 529
MlsI TGGCCA 1 cut(s) 13
MluNI TGGCCA 1 cut(s) 13
MlyI GAGTC 2 cut(s) 1394, 1430
Mox20I TGGCCA 1 cut(s) 13
Mph1103I ATGCAT 1 cut(s) 550
MscI TGGCCA 1 cut(s) 13
MseI TTAA 8 cut(s) 246, 300, 486, 681, 812, 921, 1127, 1304
MslI CAYNNNNRTG 3 cut(s) 668, 935, 950
Msp20I TGGCCA 1 cut(s) 13
MspA1I CMGCKG 3 cut(s) 208, 872, 1391
MspI CCGG 2 cut(s) 354, 1476
MspR9I CCNGG 1 cut(s) 1477
MunI CAATTG 2 cut(s) 285, 500
MvnI CGCG 1 cut(s) 648
MwoI GCNNNNNNNGC 6 cut(s) 287, 321, 799, 866, 878, 1450
NciI CCSGG 1 cut(s) 1477
NcoI CCATGG 1 cut(s) 108
NdeI CATATG 1 cut(s) 220
NdeII GATC 2 cut(s) 1472, 1508
NlaIII CATG 5 cut(s) 112, 552, 673, 940, 1163
NlaIV GGNNCC 3 cut(s) 34, 1089, 1474
NmeAIII GCCGAG 1 cut(s) 129
NmuCI GTSAC 2 cut(s) 943, 1289
NruI TCGCGA 1 cut(s) 648
NsiI ATGCAT 1 cut(s) 550
NspI RCATGY 1 cut(s) 552
PagI TCATGA 1 cut(s) 1159
PceI AGGCCT 1 cut(s) 143
PciSI GCTCTTC 2 cut(s) 775, 1343
PfeI GAWTC 4 cut(s) 992, 1460, 1483, 1496
PkrI GCNGC 8 cut(s) 91, 210, 280, 283, 792, 795, 871, 883
PleI GAGTC 2 cut(s) 1393, 1429
PpsI GAGTC 2 cut(s) 1393, 1429
PpuMI RGGWCCY 1 cut(s) 32
Psp124BI GAGCTC 1 cut(s) 529
Psp5II RGGWCCY 1 cut(s) 32
PspFI CCCAGC 1 cut(s) 239
PspN4I GGNNCC 3 cut(s) 34, 1089, 1474
PspPI GGNCC 2 cut(s) 32, 1087
PspPPI RGGWCCY 1 cut(s) 32
PstI CTGCAG 2 cut(s) 94, 280
PsuI RGATCY 2 cut(s) 1472, 1508
PvuII CAGCTG 1 cut(s) 872
RruI TCGCGA 1 cut(s) 648
RsaI GTAC 1 cut(s) 232
RsaNI GTAC 1 cut(s) 231
RseI CAYNNNNRTG 3 cut(s) 668, 935, 950
SacI GAGCTC 1 cut(s) 529
SapI GCTCTTC 2 cut(s) 775, 1343
SaqAI TTAA 8 cut(s) 246, 300, 486, 681, 812, 921, 1127, 1304
SatI GCNGC 8 cut(s) 90, 209, 279, 282, 791, 794, 870, 882
Sau3AI GATC 2 cut(s) 1472, 1508
Sau96I GGNCC 2 cut(s) 32, 1087
SchI GAGTC 2 cut(s) 1394, 1430
ScrFI CCNGG 1 cut(s) 1477
SduI GDGCHC 1 cut(s) 529
SfaNI GCATC 7 cut(s) 114, 214, 243, 505, 709, 1207, 1462
SfcI CTRYAG 3 cut(s) 90, 276, 1257
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 3 cut(s) 668, 935, 950
SmlI CTYRAG 1 cut(s) 1231
SmoI CTYRAG 1 cut(s) 1231
SseBI AGGCCT 1 cut(s) 143
SsiI CCGC 5 cut(s) 127, 208, 1368, 1391, 1403
SspI AATATT 2 cut(s) 342, 1000
SspMI CTAG 2 cut(s) 774, 1029
SstI GAGCTC 1 cut(s) 529
StuI AGGCCT 1 cut(s) 143
StyD4I CCNGG 1 cut(s) 1475
StyI CCWWGG 5 cut(s) 108, 783, 958, 1179, 1344
TaaI ACNGT 4 cut(s) 160, 181, 1009, 1450
TaiI ACGT 1 cut(s) 510
TaqI TCGA 3 cut(s) 1104, 1358, 1372
TauI GCSGC 1 cut(s) 211
TfiI GAWTC 4 cut(s) 992, 1460, 1483, 1496
Tru1I TTAA 8 cut(s) 246, 300, 486, 681, 812, 921, 1127, 1304
Tru9I TTAA 8 cut(s) 246, 300, 486, 681, 812, 921, 1127, 1304
TscAI CASTG 5 cut(s) 184, 421, 517, 705, 745
TseFI GTSAC 2 cut(s) 943, 1289
TseI GCWGC 7 cut(s) 89, 278, 281, 790, 793, 869, 881
Tsp45I GTSAC 2 cut(s) 943, 1289
TspDTI ATGAA 3 cut(s) 17, 282, 1148
TspGWI ACGGA 1 cut(s) 1057
TspRI CASTG 5 cut(s) 184, 421, 517, 705, 745
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 6 cut(s) 482, 652, 777, 1032, 1080, 1148
XbaI TCTAGA 1 cut(s) 773
XceI RCATGY 1 cut(s) 552
XmiI GTMKAC 1 cut(s) 1071
XspI CTAG 2 cut(s) 774, 1029
ZraI GACGTC 1 cut(s) 508
Zsp2I ATGCAT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.