Rorug07G0317500
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
32335247 .. 32344363
9117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0317500.1

Sequence Viewer

Length: 2028 bp
ATGGCGCTCTCGGCCTCAAATCATCCCTCAGGAGTTTCCCGTCCAGGGACAAGTGATGCTTTGTTTAAGGAGCTATGGCATGCTTGTGCTGGACCCCTTGTCACCCTGCCACGTGAAGGGGAGCGAGTTTATTACTTTCCCCAGGGACACATGGAACAGCTGGAGGCATCAATGCATCAGATGTCGGAGCAGCAAATGCCTTCATTCAATCTGCCATCCAAAATTTTATGTAAAGTTGTTAATGTTCAGCTTCGGGCTGAACCAGAAACCGACGAAGTTTATGCGCAAGTTACTCTGCTACCAGAAACTGATCAAAGCGAGGTAACAAGCCCAGATCCTCCTCTCCCAGAAATTCCACGCTGTACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACAAGTACACATGGGGGATTCTCTGTCCTTCGGAGGCATGCTGATGATTGTCTGCCACCACTGGATATGTCTCAGCAGCCTCCTTGGCAAGAACTAGTTGCAACTGATCTGCACGGAAATGAATGGCATTTTCGGCATATATTTCGAGGGCAACCTAGGCGCCACTTACTCACAACTGGGTGGAGTGTATTTGTTAGTTCCAAAAAATTAGTAGCTGGTGATGCGTTTATATTCCTAAGAGGTGAGACTGGGGAACTGCGTGTCGGTGTCAGGAGACTGATGAGACAACCAAGCAATATGCCATCTTCTGTCATTTCTAGTCACAGTATGCATCTTGGAGTCCTAGCTACTGCATCTCATGCCATTGCAACTGGGACACTATTTTCGGTCTTCTACAAGCCAAGAACAAGTCGATCTGAGTTCCTTGTTAGTGTCAACAAGTACCTTGAAGCTCGCAGTCACAAACTCTCTGTTGGGATGAGGTTTAAGATGAGATTTGAGGGTGAGGAAGTTCCTGAAAGAAGGTTCAGTGGCACGATTGTTGGTGTTGGGGATAATGCATCACCTGGATGGGCAAATTCTGAGTGGCGATCTCTAAAGGTCCAATGGGATGAACCCTCATCTATATTGCGGCCAGATAGAGTCTCACCTTGGGAATTGGAGCCCCTGGTAGCAACTACTCCACTAAACTCCCAACCTGCACTGAGAAACAAGCGGGCACGACCTCCTGTTTTACCTTCCTCATCCCCAGATCTTTCTGCACTGGGTGAGTGGAAATCCCAAGTAGAATCTCCTTCGGCTTTCTCATATAATGACCCACAGCGTGGTCGAGACCTCTATCCATCACCCAAGTATAGTTCTGCTTCAAAAGCCAGTTCTCTTTGTTTTAAGGGCAATAATTCTCTAGCTGCTGTTTCTGCGAACCCAATGTTTTGGTCCAATCGAGTTGAAGCCGTTACGGAGTCTTTTTCACCTGTTATGAGAGATTCGGTGGAAAGGAGACAAAGCACTGGGAATGGCTGTAGGCTGTTTGGAATTCAGTTGCTTGATAACTCTAATGTAGAAGAGACTTCACCCATGGTAGTGTCTGGAAAGCTGGGGGATGTTCAACCAATTTCTTCATTTGATGCTGAATCTGACCAACACTCAGAACCATCAAATGTCAACCGATCTGATCTTCCTTCAGGAAGTTGTGACGCTGAAAAATCATCCCTCAGATCACCTCAGGAATCGCAAAGCAGGCAAATTCGGAGTTGCACAAAGGTTCATATGCAGGGAATTGCAGTAGGAAGAGCTGTAGATTTAGCACGGTTTGAGGGATATGAGGACCTGCTTAAGAAACTGGAAGATATGTTTGATATTGAAGGCGAGCTGAGTGGATCTACCAAGAAATGGCAAGTTGTCTACACTGATGATGAGGATGACATGATGATGGTTGGGGATGACCCATGGCATGAGTTCTGCAGCATGGTAAGGAAGATTTTCATCTATACAGTGGAGGAAGTGAAGAGGTTGTCACCCAAGATAAAACTTCCAGTAGGTGGAGAGGCTAAACAAGGCAAGCCAGATTATGAAGCAGCTATCAATGCAGAAGACGGGTCATCTGTTGTGGGGACGGCATATTGA
Functional Annotation

Protein Analysis

675

Amino Acids

74.94

Weight (kDa)

5.96

Isoelectric Point (pI)

59.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 126 - 226 7.5e-22 B3 DNA binding domain
BRWD_AD PF25313 252 - 357 1.8e-08 BRWD/PHIP ancillary domain-like domain
ARF_AD PF06507 275 - 357 2.7e-33 Auxin response factor ancillary domain
AUX_IAA PF02309 542 - 587 5.1e-06 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 285
Acc36I ACCTGC 2 cut(s) 1108, 1740
AccB1I GGYRCC 1 cut(s) 561
AccB7I CCANNNNNTGG 3 cut(s) 1226, 1794, 1943
AccI GTMKAC 1 cut(s) 1806
AciI CCGC 2 cut(s) 1033, 1117
AclWI GGATC 2 cut(s) 329, 1789
AcoI YGGCCR 1 cut(s) 1034
AcsI RAATTY 5 cut(s) 222, 351, 979, 1437, 1647
AcuI CTGAAG 1 cut(s) 1569
AcvI CACGTG 1 cut(s) 113
AcyI GRCGYC 1 cut(s) 562
AdeI CACNNNGTG 2 cut(s) 1169, 1226
AfaI GTAC 3 cut(s) 364, 409, 845
AfiI CCNNNNNNNGG 5 cut(s) 45, 116, 1226, 1794, 1943
AflII CTTAAG 1 cut(s) 1736
AgsI TTSAA 6 cut(s) 208, 851, 1269, 1352, 1511, 1766
AhdI GACNNNNNGTC 1 cut(s) 98
AhlI ACTAGT 1 cut(s) 496
AjnI CCWGG 4 cut(s) 43, 141, 967, 1068
Alw26I GTCTC 8 cut(s) 477, 641, 670, 679, 1051, 1227, 1396, 1463
AlwI GGATC 2 cut(s) 329, 1789
AlwNI CAGNNNCTG 1 cut(s) 308
AoxI GGCC 2 cut(s) 12, 1034
ApeKI GCWGC 5 cut(s) 190, 478, 1310, 1866, 1979
ApoI RAATTY 5 cut(s) 222, 351, 979, 1437, 1647
ArsI GACNNNNNNTTYG 2 cut(s) 769, 801
Asp700I GAANNNNTTC 1 cut(s) 1883
AspA2I CCTAGG 1 cut(s) 557
AspLEI GCGC 3 cut(s) 7, 286, 564
AspS9I GGNCC 4 cut(s) 92, 1003, 1338, 1729
AvaII GGWCC 4 cut(s) 92, 1003, 1338, 1729
AvrII CCTAGG 1 cut(s) 557
AxyI CCTNAGG 2 cut(s) 28, 1626
BaeGI GKGCMC 1 cut(s) 1123
BanI GGYRCC 1 cut(s) 561
BanII GRGCYC 1 cut(s) 1068
BbrPI CACGTG 1 cut(s) 113
BbsI GAAGAC 2 cut(s) 784, 2001
BbvI GCAGC 5 cut(s) 202, 490, 1297, 1878, 1991
BccI CCATC 6 cut(s) 223, 712, 966, 1252, 1564, 1828
BceAI ACGGC 1 cut(s) 1340
BcgI CGANNNNNNTGC 4 cut(s) 263, 297, 527, 561
BciT130I CCWGG 4 cut(s) 45, 143, 969, 1070
BclI TGATCA 1 cut(s) 310
BcoDI GTCTC 8 cut(s) 477, 641, 670, 679, 1051, 1227, 1396, 1463
BcuI ACTAGT 1 cut(s) 496
BfaI CTAG 5 cut(s) 497, 558, 720, 746, 1307
BfmI CTRYAG 3 cut(s) 1423, 1698, 1864
BfoI RGCGCY 2 cut(s) 8, 565
BfrI CTTAAG 1 cut(s) 1736
BfuAI ACCTGC 2 cut(s) 1108, 1740
BglI GCCNNNNNGGC 1 cut(s) 487
BglII AGATCT 1 cut(s) 1153
BisI GCNGC 6 cut(s) 191, 479, 1034, 1311, 1867, 1980
BlnI CCTAGG 1 cut(s) 557
BlsI GCNGC 6 cut(s) 192, 480, 1035, 1312, 1868, 1981
Bme1390I CCNGG 4 cut(s) 45, 143, 969, 1070
Bme18I GGWCC 4 cut(s) 92, 1003, 1338, 1729
BmeRI GACNNNNNGTC 1 cut(s) 98
BmgT120I GGNCC 4 cut(s) 92, 1003, 1338, 1729
BmiI GGNNCC 3 cut(s) 94, 563, 1065
BmrFI CCNGG 4 cut(s) 45, 143, 969, 1070
BmrI ACTGGG 5 cut(s) 588, 660, 783, 1175, 1422
BmsI GCATC 8 cut(s) 46, 176, 184, 613, 742, 764, 971, 1519
BmuI ACTGGG 5 cut(s) 588, 660, 783, 1175, 1422
BpiI GAAGAC 2 cut(s) 784, 2001
BpmI CTGGAG 1 cut(s) 182
BsaAI YACGTR 1 cut(s) 113
BsaBI GATNNNNATC 1 cut(s) 1886
BsaHI GRCGYC 1 cut(s) 562
BsaI GGTCTC 1 cut(s) 1227
BsaJI CCNNGG 9 cut(s) 44, 141, 142, 485, 557, 1052, 1068, 1479, 1850
Bsc4I CCNNNNNNNGG 5 cut(s) 45, 116, 1226, 1794, 1943
Bse1I ACTGG 9 cut(s) 468, 583, 655, 778, 1170, 1275, 1417, 1749, 1937
Bse21I CCTNAGG 2 cut(s) 28, 1626
Bse3DI GCAATG 1 cut(s) 765
Bse8I GATNNNNATC 1 cut(s) 1886
BseBI CCWGG 4 cut(s) 45, 143, 969, 1070
BseDI CCNNGG 9 cut(s) 44, 141, 142, 485, 557, 1052, 1068, 1479, 1850
BseJI GATNNNNATC 1 cut(s) 1886
BseLI CCNNNNNNNGG 5 cut(s) 45, 116, 1226, 1794, 1943
BseMI GCAATG 1 cut(s) 765
BseMII CTCAG 9 cut(s) 42, 488, 810, 975, 1097, 1563, 1630, 1640, 1766
BseNI ACTGG 9 cut(s) 468, 583, 655, 778, 1170, 1275, 1417, 1749, 1937
BseRI GAGGAG 1 cut(s) 330
BseSI GKGCMC 1 cut(s) 1123
BseXI GCAGC 5 cut(s) 202, 490, 1297, 1878, 1991
BseYI CCCAGC 1 cut(s) 1498
BsgI GTGCAG 3 cut(s) 497, 1086, 1146
BshFI GGCC 2 cut(s) 14, 1036
BshNI GGYRCC 1 cut(s) 561
BslFI GGGAC 3 cut(s) 61, 159, 790
BslI CCNNNNNNNGG 5 cut(s) 45, 116, 1226, 1794, 1943
BsmAI GTCTC 8 cut(s) 477, 641, 670, 679, 1051, 1227, 1396, 1463
BsmFI GGGAC 3 cut(s) 61, 159, 790
BsnI GGCC 2 cut(s) 14, 1036
Bso31I GGTCTC 1 cut(s) 1227
Bsp1286I GDGCHC 2 cut(s) 1068, 1123
Bsp1407I TGTACA 1 cut(s) 362
Bsp19I CCATGG 2 cut(s) 1479, 1850
BspACI CCGC 2 cut(s) 1033, 1117
BspANI GGCC 2 cut(s) 14, 1036
BspCNI CTCAG 9 cut(s) 41, 487, 811, 976, 1098, 1562, 1629, 1639, 1767
BspLI GGNNCC 3 cut(s) 94, 563, 1065
BspMAI CTGCAG 1 cut(s) 1868
BspMI ACCTGC 2 cut(s) 1108, 1740
BspPI GGATC 2 cut(s) 329, 1789
BspQI GCTCTTC 1 cut(s) 1687
BspT107I GGYRCC 1 cut(s) 561
BspTI CTTAAG 1 cut(s) 1736
BspTNI GGTCTC 1 cut(s) 1227
BsrDI GCAATG 1 cut(s) 765
BsrGI TGTACA 1 cut(s) 362
BsrI ACTGG 9 cut(s) 468, 583, 655, 778, 1170, 1275, 1417, 1749, 1937
BssECI CCNNGG 9 cut(s) 44, 141, 142, 485, 557, 1052, 1068, 1479, 1850
BssNI GRCGYC 1 cut(s) 562
BssT1I CCWWGG 5 cut(s) 485, 557, 1052, 1479, 1850
Bst2UI CCWGG 4 cut(s) 45, 143, 969, 1070
Bst4CI ACNGT 4 cut(s) 367, 728, 1713, 1897
Bst6I CTCTTC 3 cut(s) 1461, 1687, 1904
BstACI GRCGYC 1 cut(s) 562
BstAFI CTTAAG 1 cut(s) 1736
BstAPI GCANNNNNTGC 2 cut(s) 196, 761
BstAUI TGTACA 1 cut(s) 362
BstBAI YACGTR 1 cut(s) 113
BstC8I GCNNGC 7 cut(s) 81, 441, 856, 1119, 1643, 1772, 1964
BstDSI CCRYGG 2 cut(s) 1479, 1850
BstH2I RGCGCY 2 cut(s) 8, 565
BstHHI GCGC 3 cut(s) 7, 286, 564
BstMAI GTCTC 8 cut(s) 477, 641, 670, 679, 1051, 1227, 1396, 1463
BstNI CCWGG 4 cut(s) 45, 143, 969, 1070
BstNSI RCATGY 2 cut(s) 83, 443
BstSCI CCNGG 4 cut(s) 43, 141, 967, 1068
BstSFI CTRYAG 3 cut(s) 1423, 1698, 1864
BstSLI GKGCMC 1 cut(s) 1123
BstV1I GCAGC 5 cut(s) 202, 490, 1297, 1878, 1991
BstV2I GAAGAC 2 cut(s) 784, 2001
BstX2I RGATCY 3 cut(s) 334, 1153, 1781
BstXI CCANNNNNNTGG 1 cut(s) 1335
BstYI RGATCY 3 cut(s) 334, 1153, 1781
Bsu36I CCTNAGG 2 cut(s) 28, 1626
BsuRI GGCC 2 cut(s) 14, 1036
BtgI CCRYGG 2 cut(s) 1479, 1850
BtsIMutI CAGTG 7 cut(s) 461, 937, 1103, 1163, 1410, 1809, 1902
BveI ACCTGC 2 cut(s) 1108, 1740
Cac8I GCNNGC 7 cut(s) 81, 441, 856, 1119, 1643, 1772, 1964
CaiI CAGNNNCTG 1 cut(s) 308
CfoI GCGC 3 cut(s) 7, 286, 564
Cfr13I GGNCC 4 cut(s) 92, 1003, 1338, 1729
CseI GACGC 1 cut(s) 1607
Csp6I GTAC 3 cut(s) 363, 408, 844
CviQI GTAC 3 cut(s) 363, 408, 844
DinI GGCGCC 1 cut(s) 563
DraIII CACNNNGTG 2 cut(s) 1169, 1226
DriI GACNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 1 cut(s) 1034
Eam1104I CTCTTC 3 cut(s) 1461, 1687, 1904
Eam1105I GACNNNNNGTC 1 cut(s) 98
EarI CTCTTC 3 cut(s) 1461, 1687, 1904
Eco130I CCWWGG 5 cut(s) 485, 557, 1052, 1479, 1850
Eco24I GRGCYC 1 cut(s) 1068
Eco31I GGTCTC 1 cut(s) 1227
Eco47I GGWCC 4 cut(s) 92, 1003, 1338, 1729
Eco57I CTGAAG 1 cut(s) 1569
Eco72I CACGTG 1 cut(s) 113
Eco81I CCTNAGG 2 cut(s) 28, 1626
EcoO109I RGGNCCY 1 cut(s) 1729
EcoRI GAATTC 1 cut(s) 1437
EcoRII CCWGG 4 cut(s) 43, 141, 967, 1068
EcoT14I CCWWGG 5 cut(s) 485, 557, 1052, 1479, 1850
EcoT22I ATGCAT 3 cut(s) 177, 735, 964
EcoT38I GRGCYC 1 cut(s) 1068
EgeI GGCGCC 1 cut(s) 563
EheI GGCGCC 1 cut(s) 563
ErhI CCWWGG 5 cut(s) 485, 557, 1052, 1479, 1850
FalI AAGNNNNNCTT 2 cut(s) 43, 75
FaqI GGGAC 3 cut(s) 61, 159, 790
FauI CCCGC 1 cut(s) 1110
FauNDI CATATG 1 cut(s) 1671
FbaI TGATCA 1 cut(s) 310
FblI GTMKAC 1 cut(s) 1806
Fnu4HI GCNGC 6 cut(s) 191, 479, 1034, 1311, 1867, 1980
FriOI GRGCYC 1 cut(s) 1068
Fsp4HI GCNGC 6 cut(s) 191, 479, 1034, 1311, 1867, 1980
FspBI CTAG 5 cut(s) 497, 558, 720, 746, 1307
FspI TGCGCA 1 cut(s) 285
GlaI GCGC 3 cut(s) 6, 285, 563
GluI GCNGC 6 cut(s) 191, 479, 1034, 1311, 1867, 1980
GsaI CCCAGC 1 cut(s) 1502
GsuI CTGGAG 1 cut(s) 182
HaeII RGCGCY 2 cut(s) 8, 565
HaeIII GGCC 2 cut(s) 14, 1036
HgaI GACGC 1 cut(s) 1607
HhaI GCGC 3 cut(s) 7, 286, 564
Hin1I GRCGYC 1 cut(s) 562
Hin6I GCGC 3 cut(s) 5, 284, 562
HinP1I GCGC 3 cut(s) 5, 284, 562
HincII GTYRAC 2 cut(s) 838, 1567
HindII GTYRAC 2 cut(s) 838, 1567
HinfI GANTC 8 cut(s) 420, 741, 1044, 1190, 1364, 1388, 1535, 1631
Hpy166II GTNNAC 4 cut(s) 410, 838, 1567, 1807
Hpy188III TCNNGA 7 cut(s) 30, 673, 917, 1232, 1491, 1587, 1628
Hpy8I GTNNAC 4 cut(s) 410, 838, 1567, 1807
Hpy99I CGWCG 1 cut(s) 275
HpyAV CCTTC 8 cut(s) 110, 210, 440, 918, 1149, 1206, 1593, 1760
HpyCH4III ACNGT 4 cut(s) 367, 728, 1713, 1897
HpyCH4IV ACGT 1 cut(s) 112
HpySE526I ACGT 1 cut(s) 112
Hsp92I GRCGYC 1 cut(s) 562
HspAI GCGC 3 cut(s) 5, 284, 562
KasI GGCGCC 1 cut(s) 561
Ksp22I TGATCA 1 cut(s) 310
LguI GCTCTTC 1 cut(s) 1687
LmnI GCTCC 4 cut(s) 70, 121, 187, 1063
Lsp1109I GCAGC 5 cut(s) 202, 490, 1297, 1878, 1991
LweI GCATC 8 cut(s) 46, 176, 184, 613, 742, 764, 971, 1519
MaeI CTAG 5 cut(s) 497, 558, 720, 746, 1307
MaeII ACGT 1 cut(s) 112
MaeIII GTNAC 8 cut(s) 100, 289, 322, 722, 860, 1357, 1595, 1917
MflI RGATCY 3 cut(s) 334, 1153, 1781
MhlI GDGCHC 2 cut(s) 1068, 1123
Mly113I GGCGCC 1 cut(s) 562
MlyI GAGTC 3 cut(s) 750, 1053, 1373
MmeI TCCRAC 1 cut(s) 165
Mph1103I ATGCAT 3 cut(s) 177, 735, 964
MroXI GAANNNNTTC 1 cut(s) 1883
MseI TTAA 5 cut(s) 66, 240, 888, 1290, 1737
MslI CAYNNNNRTG 6 cut(s) 84, 444, 519, 970, 1484, 1832
MspA1I CMGCKG 1 cut(s) 160
MspCI CTTAAG 1 cut(s) 1736
MspR9I CCNGG 4 cut(s) 45, 143, 969, 1070
MvaI CCWGG 4 cut(s) 45, 143, 969, 1070
NarI GGCGCC 1 cut(s) 562
NcoI CCATGG 2 cut(s) 1479, 1850
NdeI CATATG 1 cut(s) 1671
NlaIV GGNNCC 3 cut(s) 94, 563, 1065
NmuCI GTSAC 5 cut(s) 100, 722, 860, 1595, 1917
NsbI TGCGCA 1 cut(s) 285
NsiI ATGCAT 3 cut(s) 177, 735, 964
NspI RCATGY 2 cut(s) 83, 443
PaeI GCATGC 2 cut(s) 83, 443
PasI CCCWGGG 1 cut(s) 142
PciSI GCTCTTC 1 cut(s) 1687
PdmI GAANNNNTTC 1 cut(s) 1883
PfeI GAWTC 5 cut(s) 420, 1190, 1388, 1535, 1631
PflMI CCANNNNNTGG 3 cut(s) 1226, 1794, 1943
PkrI GCNGC 6 cut(s) 192, 480, 1035, 1312, 1868, 1981
PleI GAGTC 3 cut(s) 749, 1052, 1372
PluTI GGCGCC 1 cut(s) 565
PmaCI CACGTG 1 cut(s) 113
PmlI CACGTG 1 cut(s) 113
PpsI GAGTC 3 cut(s) 749, 1052, 1372
Ppu21I YACGTR 1 cut(s) 113
PpuMI RGGWCCY 1 cut(s) 1729
Psp5II RGGWCCY 1 cut(s) 1729
Psp6I CCWGG 4 cut(s) 43, 141, 967, 1068
PspCI CACGTG 1 cut(s) 113
PspFI CCCAGC 1 cut(s) 1498
PspGI CCWGG 4 cut(s) 43, 141, 967, 1068
PspN4I GGNNCC 3 cut(s) 94, 563, 1065
PspPI GGNCC 4 cut(s) 92, 1003, 1338, 1729
PspPPI RGGWCCY 1 cut(s) 1729
PstI CTGCAG 1 cut(s) 1868
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 3 cut(s) 334, 1153, 1781
PvuII CAGCTG 1 cut(s) 160
RsaI GTAC 3 cut(s) 364, 409, 845
RsaNI GTAC 3 cut(s) 363, 408, 844
RseI CAYNNNNRTG 6 cut(s) 84, 444, 519, 970, 1484, 1832
SapI GCTCTTC 1 cut(s) 1687
SaqAI TTAA 5 cut(s) 66, 240, 888, 1290, 1737
SatI GCNGC 6 cut(s) 191, 479, 1034, 1311, 1867, 1980
Sau96I GGNCC 4 cut(s) 92, 1003, 1338, 1729
SchI GAGTC 3 cut(s) 750, 1053, 1373
ScrFI CCNGG 4 cut(s) 45, 143, 969, 1070
SduI GDGCHC 2 cut(s) 1068, 1123
SfaNI GCATC 8 cut(s) 46, 176, 184, 613, 742, 764, 971, 1519
SfcI CTRYAG 3 cut(s) 1423, 1698, 1864
SfoI GGCGCC 1 cut(s) 563
SinI GGWCC 4 cut(s) 92, 1003, 1338, 1729
SmiMI CAYNNNNRTG 6 cut(s) 84, 444, 519, 970, 1484, 1832
SmlI CTYRAG 1 cut(s) 1736
SmoI CTYRAG 1 cut(s) 1736
SpeI ACTAGT 1 cut(s) 496
SphI GCATGC 2 cut(s) 83, 443
SsiI CCGC 2 cut(s) 1033, 1117
SspDI GGCGCC 1 cut(s) 561
SspMI CTAG 5 cut(s) 497, 558, 720, 746, 1307
StyD4I CCNGG 4 cut(s) 43, 141, 967, 1068
StyI CCWWGG 5 cut(s) 485, 557, 1052, 1479, 1850
TaaI ACNGT 4 cut(s) 367, 728, 1713, 1897
TaiI ACGT 1 cut(s) 115
TaqI TCGA 4 cut(s) 547, 814, 1231, 1345
TaqII GACCGA 1 cut(s) 778
TatI WGTACW 2 cut(s) 362, 407
TauI GCSGC 1 cut(s) 1036
TfiI GAWTC 5 cut(s) 420, 1190, 1388, 1535, 1631
Tru1I TTAA 5 cut(s) 66, 240, 888, 1290, 1737
Tru9I TTAA 5 cut(s) 66, 240, 888, 1290, 1737
TscAI CASTG 7 cut(s) 468, 937, 1110, 1170, 1417, 1816, 1902
TseFI GTSAC 5 cut(s) 100, 722, 860, 1595, 1917
TseI GCWGC 5 cut(s) 190, 478, 1310, 1866, 1979
Tsp45I GTSAC 5 cut(s) 100, 722, 860, 1595, 1917
TspDTI ATGAA 8 cut(s) 192, 363, 537, 1029, 1512, 1658, 1876, 1989
TspGWI ACGGA 2 cut(s) 531, 1376
TspRI CASTG 7 cut(s) 468, 937, 1110, 1170, 1417, 1816, 1902
Van91I CCANNNNNTGG 3 cut(s) 1226, 1794, 1943
Vha464I CTTAAG 1 cut(s) 1736
VpaK11BI GGWCC 4 cut(s) 92, 1003, 1338, 1729
XapI RAATTY 5 cut(s) 222, 351, 979, 1437, 1647
XceI RCATGY 2 cut(s) 83, 443
XmaJI CCTAGG 1 cut(s) 557
XmiI GTMKAC 1 cut(s) 1806
XmnI GAANNNNTTC 1 cut(s) 1883
XspI CTAG 5 cut(s) 497, 558, 720, 746, 1307
Zsp2I ATGCAT 3 cut(s) 177, 735, 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.