Rmu_sc0002046.1_g000004
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002046.1
Physical Location & Seq
Forward (+)
8484 .. 10970
2487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002046.1_g000004.1.cds

Sequence Viewer

Length: 2049 bp
atgtttggaaaaggagaaggtccagctattggtatagatcttggaacaacttactcatgcgttggcgtctggcaacacggtcatgttgagatcatagccaatgaccagggcaacagaacaacgccttcttacgttgcttttacagatactgggcgtttgattggtgatgctgccaagaaccaagcctccatgaaccccattaacactgtttttgatgcaaagcgcttgattggtaggagattcaacgatgcttctgtcaagagtgatatggagttttggcctttcaaagttcgtggtgtcgacaacaagccaatgattgtggtcaactacaataatcaagagaagcggtttgctgctgaggagatatcatccatgattcttgttaatttcttagatgcaaagcgcttgattggtaggagattcaacgatgcttctgtcaagagtgatatggagttttggcctttcaaagttcgtggtgtagacaacaagccaatgattgtggtcaactacaataatcaagagaagcggtttgctgctgaggagatatcatccatgattcttgttaagatgagggaaatagcagaggcttatcttggatcgacagtaaagaatgctgttgtaacggtcccagcatactttaatgattttcaacgtcaggctacaaaagatgctgggataattgcgggtatgaatgttttacgtattattaacgagccgacagctgctgcaattgcttatggccttgatagaaaatacaccactgttggaggaaagaacgttcttatttttgatctgggaggtggaacttttgatgtttcccttctcaaaattgaagagggaattttcgaggtgaaagctacgactggagatactcatctcgggggtgaagattttgacaatacaatggtgaactattttgtacaagagttcaagagaaaacacgaaaaggacattagtaaaaatcccaaagcactgaggagattgagaacatcttgtgagagagcgaagagaattctttcttccagtactcaaactattattgagattgattctttatatgatggaattgacttttcctccacaataactagagcaagatttgaggagctgaacatggatctctttaagaaatgtatggagcctgtggacaagtgtttgaaggatgctgaaatggacaagagcagcgttcatgatgttgttcttattggtggatctactagaattcccaaggtacaacagctattgcaggagttctttaatggcaaaaagctttgcaagagcatcaatcctgatgaagcagtggcatatggtgccgccgtacaagccgcaattttgggcggtgagggaaatattgagaaggttcaagacgtactcttgttggacgtcactccgctgtcccttggtatagagagtgataatggacagatgagtgttgtagtcccaagaaacactaccatccccaccacgaaagagagtgtctttacaacagtccaaaataggcaacaatgtgtagagtttcctgtgtatgagggtgagtcaataatagccaaacagaacagattgttgggtatatttgagctcaaagacatccaatgtgctccaaagggagtgcctcagcttaacgtttgctttaacattgatgccaacggaattatggttgtctctgccgaggacaaatcaacgaagaagaaaagcaagatcacaatcgtcaataacaacaaaggcaggctatctaagatggaaattgcgaggatgatcaaggaggcagaaaagtacaggtttgaagacgaggagaataagaagaaattggaggctaaggctgcattgatggactatacacacgacatggaggaaaaaattcctagtctcagaaagctcaagcgagcggacaagaagaaatatgaggatgaggttgcaaagaccagccggtggcttgacgagaacgagaaccgacttgctgaatgcaaagaatacgaggaccagatgaaaaagcttgagaacgtttgcaatcgcataattggcaagatgcatcagaatgggtgtggatga
Functional Annotation

Protein Analysis

682

Amino Acids

76.61

Weight (kDa)

8.09

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1386
AccB1I GGYRCC 1 cut(s) 1310
AccB7I CCANNNNNTGG 2 cut(s) 29, 1929
AccBSI CCGCTC 1 cut(s) 1886
AccI GTMKAC 2 cut(s) 300, 480
AciI CCGC 8 cut(s) 346, 526, 683, 1314, 1326, 1338, 1391, 1886
AclI AACGTT 3 cut(s) 777, 1623, 2001
AclWI GGATC 3 cut(s) 604, 1125, 1219
AcsI RAATTY 4 cut(s) 840, 1011, 1221, 1857
AcyI GRCGYC 2 cut(s) 66, 1383
AfaI GTAC 6 cut(s) 921, 1027, 1233, 1320, 1371, 1775
AfeI AGCGCT 2 cut(s) 224, 404
AfiI CCNNNNNNNGG 2 cut(s) 29, 1929
AjnI CCWGG 1 cut(s) 105
AjuI GAANNNNNNNTTGG 2 cut(s) 1547, 1579
AloI GAACNNNNNNTCC 4 cut(s) 170, 202, 762, 794
Alw21I GWGCWC 2 cut(s) 1581, 1600
Alw26I GTCTC 2 cut(s) 1666, 1871
AlwI GGATC 3 cut(s) 604, 1125, 1219
AlwNI CAGNNNCTG 2 cut(s) 149, 725
Ama87I CYCGRG 1 cut(s) 878
Aor51HI AGCGCT 2 cut(s) 224, 404
AoxI GGCC 3 cut(s) 278, 458, 739
ApeKI GCWGC 7 cut(s) 170, 353, 533, 722, 725, 1182, 1820
ApoI RAATTY 4 cut(s) 840, 1011, 1221, 1857
Asp700I GAANNNNTTC 2 cut(s) 1015, 1857
AspLEI GCGC 2 cut(s) 225, 405
AspS9I GGNCC 3 cut(s) 20, 625, 1978
AsuHPI GGTGA 6 cut(s) 176, 862, 896, 919, 1352, 1544
AvaI CYCGRG 1 cut(s) 878
AvaII GGWCC 3 cut(s) 20, 625, 1978
BanI GGYRCC 1 cut(s) 1310
BanII GRGCYC 1 cut(s) 1581
BbsI GAAGAC 1 cut(s) 1791
Bbv12I GWGCWC 2 cut(s) 1581, 1600
BbvCI CCTCAGC 3 cut(s) 357, 537, 1614
BbvI GCAGC 7 cut(s) 157, 340, 520, 709, 712, 1194, 1807
BccI CCATC 4 cut(s) 1055, 1463, 1732, 1822
BceAI ACGGC 1 cut(s) 1301
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 1 cut(s) 1755
BcoDI GTCTC 2 cut(s) 1666, 1871
BfaI CTAG 3 cut(s) 1089, 1218, 1863
BfoI RGCGCY 2 cut(s) 226, 406
BglII AGATCT 1 cut(s) 37
BisI GCNGC 9 cut(s) 171, 354, 534, 723, 726, 1183, 1314, 1326, 1821
BlsI GCNGC 9 cut(s) 172, 355, 535, 724, 727, 1184, 1315, 1327, 1822
BmcAI AGTACT 1 cut(s) 1027
Bme1390I CCNGG 1 cut(s) 107
Bme18I GGWCC 3 cut(s) 20, 625, 1978
BmeT110I CYCGRG 1 cut(s) 878
BmgT120I GGNCC 3 cut(s) 20, 625, 1978
BmiI GGNNCC 3 cut(s) 627, 1140, 1312
BmrFI CCNGG 1 cut(s) 107
BmrI ACTGGG 1 cut(s) 159
BmuI ACTGGG 1 cut(s) 159
BpiI GAAGAC 1 cut(s) 1791
BpmI CTGGAG 1 cut(s) 885
Bpu10I CCTNAGC 4 cut(s) 357, 537, 1614, 1815
BpuEI CTTGAG 2 cut(s) 1862, 2015
BsaAI YACGTR 1 cut(s) 701
BsaBI GATNNNNATC 2 cut(s) 873, 1703
BsaHI GRCGYC 2 cut(s) 66, 1383
BsaJI CCNNGG 4 cut(s) 106, 1227, 1399, 1668
BsaXI ACNNNNNCTCC 4 cut(s) 170, 200, 1061, 1091
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 1929
Bse118I RCCGGY 1 cut(s) 1926
Bse1I ACTGG 3 cut(s) 154, 868, 1023
Bse8I GATNNNNATC 2 cut(s) 873, 1703
BseBI CCWGG 1 cut(s) 107
BseDI CCNNGG 4 cut(s) 106, 1227, 1399, 1668
BseGI GGATG 7 cut(s) 368, 548, 1168, 1455, 1587, 1758, 1912
BseJI GATNNNNATC 2 cut(s) 873, 1703
BseLI CCNNNNNNNGG 2 cut(s) 29, 1929
BseMII CTCAG 5 cut(s) 348, 528, 965, 1628, 1882
BseNI ACTGG 3 cut(s) 154, 868, 1023
BseRI GAGGAG 5 cut(s) 374, 554, 991, 1118, 1805
BseXI GCAGC 7 cut(s) 157, 340, 520, 709, 712, 1194, 1807
BseYI CCCAGC 2 cut(s) 628, 671
BshFI GGCC 3 cut(s) 280, 460, 741
BshNI GGYRCC 1 cut(s) 1310
BsiHKAI GWGCWC 2 cut(s) 1581, 1600
BsiHKCI CYCGRG 1 cut(s) 878
BsiSI CCGG 1 cut(s) 1927
BslFI GGGAC 3 cut(s) 611, 1381, 1424
BslI CCNNNNNNNGG 2 cut(s) 29, 1929
BsmAI GTCTC 2 cut(s) 1666, 1871
BsmFI GGGAC 3 cut(s) 611, 1381, 1424
BsmI GAATGC 2 cut(s) 616, 1967
BsnI GGCC 3 cut(s) 280, 460, 741
BsoBI CYCGRG 1 cut(s) 878
Bsp1286I GDGCHC 2 cut(s) 1581, 1600
Bsp1407I TGTACA 1 cut(s) 919
Bsp143I GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
BspACI CCGC 8 cut(s) 346, 526, 683, 1314, 1326, 1338, 1391, 1886
BspANI GGCC 3 cut(s) 280, 460, 741
BspCNI CTCAG 5 cut(s) 349, 529, 966, 1627, 1881
BspHI TCATGA 1 cut(s) 1189
BspLI GGNNCC 3 cut(s) 627, 1140, 1312
BspPI GGATC 3 cut(s) 604, 1125, 1219
BspT107I GGYRCC 1 cut(s) 1310
BsrBI CCGCTC 1 cut(s) 1886
BsrFI RCCGGY 1 cut(s) 1926
BsrGI TGTACA 1 cut(s) 919
BsrI ACTGG 3 cut(s) 154, 868, 1023
BssAI RCCGGY 1 cut(s) 1926
BssECI CCNNGG 4 cut(s) 106, 1227, 1399, 1668
BssMI GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
BssNI GRCGYC 2 cut(s) 66, 1383
BssT1I CCWWGG 2 cut(s) 1227, 1399
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 6 cut(s) 80, 208, 604, 625, 763, 1489
Bst6I CTCTTC 2 cut(s) 828, 1001
BstACI GRCGYC 2 cut(s) 66, 1383
BstAPI GCANNNNNTGC 1 cut(s) 1310
BstAUI TGTACA 1 cut(s) 919
BstBAI YACGTR 1 cut(s) 701
BstC8I GCNNGC 2 cut(s) 1727, 1884
BstDEI CTNAG 8 cut(s) 357, 391, 537, 974, 1614, 1734, 1815, 1868
BstF5I GGATG 7 cut(s) 368, 548, 1168, 1455, 1587, 1758, 1912
BstH2I RGCGCY 2 cut(s) 226, 406
BstHHI GCGC 2 cut(s) 225, 405
BstKTI GATC 8 cut(s) 40, 93, 599, 793, 1120, 1214, 1701, 1758
BstMAI GTCTC 2 cut(s) 1666, 1871
BstMBI GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
BstMWI GCNNNNNNNGC 5 cut(s) 731, 1310, 1322, 1820, 2019
BstNI CCWGG 1 cut(s) 107
BstSCI CCNGG 1 cut(s) 105
BstSNI TACGTA 1 cut(s) 701
BstV1I GCAGC 7 cut(s) 157, 340, 520, 709, 712, 1194, 1807
BstV2I GAAGAC 1 cut(s) 1791
BstX2I RGATCY 3 cut(s) 37, 1117, 1211
BstYI RGATCY 3 cut(s) 37, 1117, 1211
BsuRI GGCC 3 cut(s) 280, 460, 741
BtsCI GGATG 7 cut(s) 368, 548, 1168, 1455, 1587, 1758, 1912
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 4 cut(s) 204, 759, 971, 1305
Cac8I GCNNGC 2 cut(s) 1727, 1884
CaiI CAGNNNCTG 2 cut(s) 149, 725
CciI TCATGA 1 cut(s) 1189
CfoI GCGC 2 cut(s) 225, 405
Cfr10I RCCGGY 1 cut(s) 1926
Cfr13I GGNCC 3 cut(s) 20, 625, 1978
CseI GACGC 1 cut(s) 55
Csp6I GTAC 6 cut(s) 920, 1026, 1232, 1319, 1370, 1774
CspCI CAANNNNNGTGG 8 cut(s) 274, 300, 309, 335, 454, 480, 489, 515
CviAII CATG 8 cut(s) 57, 83, 190, 373, 553, 1114, 1190, 1846
CviQI GTAC 6 cut(s) 920, 1026, 1232, 1319, 1370, 1774
DdeI CTNAG 8 cut(s) 357, 391, 537, 974, 1614, 1734, 1815, 1868
DpnI GATC 8 cut(s) 39, 92, 598, 792, 1119, 1213, 1700, 1757
DpnII GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
Eam1104I CTCTTC 2 cut(s) 828, 1001
EarI CTCTTC 2 cut(s) 828, 1001
Ecl136II GAGCTC 1 cut(s) 1579
Eco105I TACGTA 1 cut(s) 701
Eco130I CCWWGG 2 cut(s) 1227, 1399
Eco24I GRGCYC 1 cut(s) 1581
Eco32I GATATC 2 cut(s) 366, 546
Eco47I GGWCC 3 cut(s) 20, 625, 1978
Eco47III AGCGCT 2 cut(s) 224, 404
Eco53kI GAGCTC 1 cut(s) 1579
Eco88I CYCGRG 1 cut(s) 878
EcoICRI GAGCTC 1 cut(s) 1579
EcoRI GAATTC 2 cut(s) 1011, 1221
EcoRII CCWGG 1 cut(s) 105
EcoRV GATATC 2 cut(s) 366, 546
EcoT14I CCWWGG 2 cut(s) 1227, 1399
EcoT22I ATGCAT 1 cut(s) 2031
EcoT38I GRGCYC 1 cut(s) 1581
ErhI CCWWGG 2 cut(s) 1227, 1399
FaeI CATG 8 cut(s) 60, 86, 193, 376, 556, 1117, 1193, 1849
FaqI GGGAC 3 cut(s) 611, 1381, 1424
FatI CATG 8 cut(s) 56, 82, 189, 372, 552, 1113, 1189, 1845
FauI CCCGC 1 cut(s) 676
FauNDI CATATG 1 cut(s) 1306
FbaI TGATCA 1 cut(s) 1755
FblI GTMKAC 2 cut(s) 300, 480
Fnu4HI GCNGC 9 cut(s) 171, 354, 534, 723, 726, 1183, 1314, 1326, 1821
FokI GGATG 7 cut(s) 355, 535, 1175, 1442, 1574, 1765, 1919
FriOI GRGCYC 1 cut(s) 1581
Fsp4HI GCNGC 9 cut(s) 171, 354, 534, 723, 726, 1183, 1314, 1326, 1821
FspBI CTAG 3 cut(s) 1089, 1218, 1863
GlaI GCGC 2 cut(s) 224, 404
GluI GCNGC 9 cut(s) 171, 354, 534, 723, 726, 1183, 1314, 1326, 1821
GsaI CCCAGC 2 cut(s) 632, 675
GsuI CTGGAG 1 cut(s) 885
HaeII RGCGCY 2 cut(s) 226, 406
HaeIII GGCC 3 cut(s) 280, 460, 741
HapII CCGG 1 cut(s) 1927
HgaI GACGC 1 cut(s) 55
HhaI GCGC 2 cut(s) 225, 405
Hin1I GRCGYC 2 cut(s) 66, 1383
Hin1II CATG 8 cut(s) 60, 86, 193, 376, 556, 1117, 1193, 1849
Hin6I GCGC 2 cut(s) 223, 403
HinP1I GCGC 2 cut(s) 223, 403
HincII GTYRAC 3 cut(s) 301, 325, 505
HindII GTYRAC 3 cut(s) 301, 325, 505
HindIII AAGCTT 2 cut(s) 1268, 1991
HinfI GANTC 6 cut(s) 240, 376, 420, 556, 1049, 1535
HpaII CCGG 1 cut(s) 1927
HphI GGTGA 6 cut(s) 176, 862, 896, 919, 1352, 1544
Hpy166II GTNNAC 6 cut(s) 301, 325, 481, 505, 910, 1147
Hpy188I TCNGA 2 cut(s) 1871, 2034
Hpy188III TCNNGA 8 cut(s) 259, 338, 439, 518, 931, 1190, 1289, 1364
Hpy8I GTNNAC 6 cut(s) 301, 325, 481, 505, 910, 1147
HpyAV CCTTC 5 cut(s) 11, 135, 830, 1153, 1351
HpyCH4III ACNGT 6 cut(s) 80, 208, 604, 625, 763, 1489
HpyCH4IV ACGT 8 cut(s) 132, 652, 700, 777, 1368, 1383, 1623, 2001
HpyF10VI GCNNNNNNNGC 5 cut(s) 731, 1310, 1322, 1820, 2019
HpyF3I CTNAG 8 cut(s) 357, 391, 537, 974, 1614, 1734, 1815, 1868
HpySE526I ACGT 8 cut(s) 132, 652, 700, 777, 1368, 1383, 1623, 2001
Hsp92I GRCGYC 2 cut(s) 66, 1383
Hsp92II CATG 8 cut(s) 60, 86, 193, 376, 556, 1117, 1193, 1849
HspAI GCGC 2 cut(s) 223, 403
Ksp22I TGATCA 1 cut(s) 1755
Kzo9I GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
LmnI GCTCC 3 cut(s) 1105, 1138, 1603
Lsp1109I GCAGC 7 cut(s) 157, 340, 520, 709, 712, 1194, 1807
MaeI CTAG 3 cut(s) 1089, 1218, 1863
MaeII ACGT 8 cut(s) 132, 652, 700, 777, 1368, 1383, 1623, 2001
MaeIII GTNAC 2 cut(s) 619, 1384
MalI GATC 8 cut(s) 39, 92, 598, 792, 1119, 1213, 1700, 1757
MbiI CCGCTC 1 cut(s) 1886
MboI GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
MboII GAAGA 9 cut(s) 845, 899, 1011, 1018, 1696, 1699, 1796, 1813, 1906
MfeI CAATTG 1 cut(s) 729
MflI RGATCY 3 cut(s) 37, 1117, 1211
MhlI GDGCHC 2 cut(s) 1581, 1600
MlyI GAGTC 1 cut(s) 1544
MmeI TCCRAC 2 cut(s) 745, 1359
Mph1103I ATGCAT 1 cut(s) 2031
MroXI GAANNNNTTC 2 cut(s) 1015, 1857
MseI TTAA 9 cut(s) 201, 384, 564, 639, 708, 1125, 1257, 1620, 1632
MslI CAYNNNNRTG 2 cut(s) 81, 2034
MspA1I CMGCKG 2 cut(s) 722, 1393
MspI CCGG 1 cut(s) 1927
MspR9I CCNGG 1 cut(s) 107
MunI CAATTG 1 cut(s) 729
Mva1269I GAATGC 2 cut(s) 616, 1967
MvaI CCWGG 1 cut(s) 107
MwoI GCNNNNNNNGC 5 cut(s) 731, 1310, 1322, 1820, 2019
NdeI CATATG 1 cut(s) 1306
NdeII GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
NlaIII CATG 8 cut(s) 60, 86, 193, 376, 556, 1117, 1193, 1849
NlaIV GGNNCC 3 cut(s) 627, 1140, 1312
NmeAIII GCCGAG 1 cut(s) 1693
NmuCI GTSAC 1 cut(s) 1384
NsiI ATGCAT 1 cut(s) 2031
PagI TCATGA 1 cut(s) 1189
PctI GAATGC 2 cut(s) 616, 1967
PdmI GAANNNNTTC 2 cut(s) 1015, 1857
PfeI GAWTC 5 cut(s) 240, 376, 420, 556, 1049
PflMI CCANNNNNTGG 2 cut(s) 29, 1929
PkrI GCNGC 9 cut(s) 172, 355, 535, 724, 727, 1184, 1315, 1327, 1822
PleI GAGTC 1 cut(s) 1543
PpsI GAGTC 1 cut(s) 1543
Ppu21I YACGTR 1 cut(s) 701
Psp124BI GAGCTC 1 cut(s) 1581
Psp1406I AACGTT 3 cut(s) 777, 1623, 2001
Psp6I CCWGG 1 cut(s) 105
PspFI CCCAGC 2 cut(s) 628, 671
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 3 cut(s) 627, 1140, 1312
PspPI GGNCC 3 cut(s) 20, 625, 1978
PstNI CAGNNNCTG 2 cut(s) 149, 725
PsuI RGATCY 3 cut(s) 37, 1117, 1211
PvuII CAGCTG 1 cut(s) 722
RsaI GTAC 6 cut(s) 921, 1027, 1233, 1320, 1371, 1775
RsaNI GTAC 6 cut(s) 920, 1026, 1232, 1319, 1370, 1774
RseI CAYNNNNRTG 2 cut(s) 81, 2034
SacI GAGCTC 1 cut(s) 1581
SalI GTCGAC 1 cut(s) 299
SaqAI TTAA 9 cut(s) 201, 384, 564, 639, 708, 1125, 1257, 1620, 1632
SatI GCNGC 9 cut(s) 171, 354, 534, 723, 726, 1183, 1314, 1326, 1821
Sau3AI GATC 8 cut(s) 37, 90, 596, 790, 1117, 1211, 1698, 1755
Sau96I GGNCC 3 cut(s) 20, 625, 1978
ScaI AGTACT 1 cut(s) 1027
SchI GAGTC 1 cut(s) 1544
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 2 cut(s) 1581, 1600
SinI GGWCC 3 cut(s) 20, 625, 1978
SmiMI CAYNNNNRTG 2 cut(s) 81, 2034
SmlI CTYRAG 2 cut(s) 1877, 1994
SmoI CTYRAG 2 cut(s) 1877, 1994
SnaBI TACGTA 1 cut(s) 701
SsiI CCGC 8 cut(s) 346, 526, 683, 1314, 1326, 1338, 1391, 1886
SspI AATATT 1 cut(s) 1351
SspMI CTAG 3 cut(s) 1089, 1218, 1863
SstI GAGCTC 1 cut(s) 1581
StyD4I CCNGG 1 cut(s) 105
StyI CCWWGG 2 cut(s) 1227, 1399
TaaI ACNGT 6 cut(s) 80, 208, 604, 625, 763, 1489
TaiI ACGT 8 cut(s) 135, 655, 703, 780, 1371, 1386, 1626, 2004
TaqI TCGA 3 cut(s) 300, 599, 846
TatI WGTACW 3 cut(s) 919, 1025, 1773
TauI GCSGC 2 cut(s) 1316, 1328
TfiI GAWTC 5 cut(s) 240, 376, 420, 556, 1049
Tru1I TTAA 9 cut(s) 201, 384, 564, 639, 708, 1125, 1257, 1620, 1632
Tru9I TTAA 9 cut(s) 201, 384, 564, 639, 708, 1125, 1257, 1620, 1632
TscAI CASTG 4 cut(s) 211, 766, 978, 1305
TseFI GTSAC 1 cut(s) 1384
TseI GCWGC 7 cut(s) 170, 353, 533, 722, 725, 1182, 1820
Tsp45I GTSAC 1 cut(s) 1384
TspDTI ATGAA 5 cut(s) 206, 704, 1178, 1308, 2000
TspGWI ACGGA 1 cut(s) 1662
TspRI CASTG 4 cut(s) 211, 766, 978, 1305
Van91I CCANNNNNTGG 2 cut(s) 29, 1929
VpaK11BI GGWCC 3 cut(s) 20, 625, 1978
XapI RAATTY 4 cut(s) 840, 1011, 1221, 1857
XcmI CCANNNNNNNNNTGG 1 cut(s) 1651
XmiI GTMKAC 2 cut(s) 300, 480
XmnI GAANNNNTTC 2 cut(s) 1015, 1857
XspI CTAG 3 cut(s) 1089, 1218, 1863
ZraI GACGTC 1 cut(s) 1384
ZrmI AGTACT 1 cut(s) 1027
Zsp2I ATGCAT 1 cut(s) 2031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.