FvH4_6g14090
HSP70 Family

Hsp70 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000026
Physical Location & Seq
Reverse (-)
8623037 .. 8626335
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g14090.t2

Sequence Viewer

Length: 1527 bp
ATGGCCGGCAAAGGAGAGGGACCGGCCATCGGAATCGATCTCGGCACCACCTACTCTTGCGTCGGCGTATGGCAACACGACCGTGTTGAGATCATCGCCAATGACCAGGGGAACAGGACCACGCCGTCGTATGTGGCTTTCACCGACACCGAGAGGTTGATCGGAGATGCCGCTAAGAACCAGGTGGCCATGAACCCAATCAACACTGTTTTTGATGCCAAGCGTTTGATTGGTCGCAGATTCACTGATGCCTCAGTTCAGGGTGACATGAAGTTGTGGCCATTCAAGGTCACCTCTGGCCCAGCTGAGAAGCCCATGATTGGAGTTCAATACAAGGGAGAGGAGAAGCAGTTTGCTGCTGAGGAGATATCCTCCATGGTCCTCATCAAGATGCGTGAGATTGCCGAGGCGTACCTTGGTGCCACCATCAAGAACGCAACCACCATTGAAATCGACTCCTTGTATGAGGGTATTGACTTCTACTCAACCATCACCCGTGCCAGATTTGAGGAGCTCAACATGGACTTGTTCAGAAAGTGTATGGAGCCAGTAGAGAAGTGTTTGAGGGATGCCAAGATGGACAAGAGCACAGTCCATGATGTTGTGCTTGTTGGTGGATCCACCCGTATTCCCAAGGTTCAACAACTCCTCCAGGATTTCTTCAATGGCAAGGAGCTCTGCAAGAGCATCAACCCCGATGAGGCCGTTGCCTATGGTGCTGCAGTTCAGGCTGCAATTCTCAGTGGTGAGGGCAATGAGAAGGTCCAGGACCTTCTTCTGTTGGATGTTACCCCTCTATCTCTTGGTTTGGAAACTGCCGGAGGTGTCATGACCGTCTTGATCCCCAGAAATACAACCATCCCAACAAAGAAGGAACAAGTCTTCTCTACGTACTCTGACAACCAGCCTGGTGTGCTCATCCAGGTCTATGAAGGAGAAAGAACCAGAACCAGGGACAACAACTTGCTCGGAAAGTTTGAGCTCTCTGGAATTCCCCCAGCTCCCAGAGGTGTGCCCCAGATCACAGTGTGTTTTGACATTGACGCCAATGGTATCTTGAATGTGTCAGCAGAGGACAAGACCACCGGTCAAAAGAACAAGATCACCATCACCAATGACAAGGGCAGGCTCTCAAAGGAGGAGATTGAAAAGATGGTTCAAGAGGCAGAGAAGTACAAGTCTGAGGATGAAGAGCACAAGAAGAAGGTTGAGGCCAAGAACGCTTTGGAGAACTACGCCTACAACATGAGGAACACCATCAAGGATGAGAAGATCGGCGAGAAGCTCCCAGGGGCCGACAAGAAGAAGATTGAGGATGCCATTGAGGCTGCCATCCAGTGGCTAGACAGCAACCAACTCGCCGAGGCTGATGAGTTTGAAGACAAGATGAAGGAGTTGGAGAGCATCTGCAACCCAATCATCGCCAAGATGTACCAGGGTTCTGGGCCTGATGGTGCCGGCCCAGTTGATGATGATGTTCCAGCTGGAAGTGGCGGTGCAGGGCCCAAGATTGAGGAGGTCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

509

Amino Acids

55.79

Weight (kDa)

4.86

Isoelectric Point (pI)

31.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 618 5e-262 Hsp70 protein
MreB_Mbl PF06723 141 - 380 4.1e-13 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 124
AccB1I GGYRCC 3 cut(s) 44, 419, 1454
AccB7I CCANNNNNTGG 1 cut(s) 1338
AccI GTMKAC 1 cut(s) 1521
AciI CCGC 2 cut(s) 171, 1494
AclWI GGATC 3 cut(s) 612, 625, 835
AcoI YGGCCR 4 cut(s) 3, 24, 186, 278
AcsI RAATTY 1 cut(s) 990
AcyI GRCGYC 1 cut(s) 1044
AdeI CACNNNGTG 1 cut(s) 1029
AfaI GTAC 4 cut(s) 413, 893, 1175, 1433
AfiI CCNNNNNNNGG 5 cut(s) 29, 320, 700, 951, 1338
AgeI ACCGGT 1 cut(s) 1085
AgsI TTSAA 9 cut(s) 286, 329, 449, 641, 664, 1060, 1148, 1160, 1379
AhdI GACNNNNNGTC 1 cut(s) 1086
AjnI CCWGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
AleI CACNNNNGTG 1 cut(s) 81
AluBI AGCT 7 cut(s) 305, 514, 676, 982, 1001, 1285, 1484
AluI AGCT 7 cut(s) 305, 514, 676, 982, 1001, 1285, 1484
Alw21I GWGCWC 6 cut(s) 516, 590, 678, 918, 984, 1197
AlwI GGATC 3 cut(s) 612, 625, 835
ApaI GGGCCC 1 cut(s) 1506
ApeKI GCWGC 4 cut(s) 356, 719, 731, 1328
ApoI RAATTY 1 cut(s) 990
AsiGI ACCGGT 1 cut(s) 1085
AsuHPI GGTGA 7 cut(s) 133, 275, 283, 484, 758, 1096, 1102
AvaII GGWCC 5 cut(s) 20, 117, 379, 763, 769
BaeGI GKGCMC 2 cut(s) 1017, 1506
BalI TGGCCA 2 cut(s) 188, 280
BamHI GGATCC 1 cut(s) 617
BanI GGYRCC 3 cut(s) 44, 419, 1454
BanII GRGCYC 4 cut(s) 516, 678, 984, 1506
BbsI GAAGAC 2 cut(s) 874, 1386
Bbv12I GWGCWC 6 cut(s) 516, 590, 678, 918, 984, 1197
BbvCI CCTCAGC 1 cut(s) 360
BbvI GCAGC 4 cut(s) 343, 706, 718, 1315
BceAI ACGGC 2 cut(s) 109, 689
BcgI CGANNNNNNTGC 2 cut(s) 1339, 1373
BciT130I CCWGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
BfaI CTAG 1 cut(s) 1343
BfmI CTRYAG 1 cut(s) 720
BglI GCCNNNNNGGC 1 cut(s) 1325
BisI GCNGC 5 cut(s) 171, 357, 720, 732, 1329
BlsI GCNGC 5 cut(s) 172, 358, 721, 733, 1330
Bme1390I CCNGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
Bme18I GGWCC 5 cut(s) 20, 117, 379, 763, 769
BmeRI GACNNNNNGTC 1 cut(s) 1086
BmiI GGNNCC 8 cut(s) 21, 46, 421, 546, 619, 1294, 1456, 1504
BmrFI CCNGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
BmrI ACTGGG 1 cut(s) 1457
BmsI GCATC 8 cut(s) 157, 205, 238, 381, 559, 696, 1306, 1413
BmuI ACTGGG 1 cut(s) 1457
BpiI GAAGAC 2 cut(s) 874, 1386
BplI GAGNNNNNCTC 2 cut(s) 356, 388
BpmI CTGGAG 1 cut(s) 635
Bpu10I CCTNAGC 1 cut(s) 360
Bsa29I ATCGAT 1 cut(s) 36
BsaAI YACGTR 1 cut(s) 891
BsaBI GATNNNNATC 1 cut(s) 1106
BsaHI GRCGYC 1 cut(s) 1044
BsaWI WCCGGW 1 cut(s) 1085
BsaXI ACNNNNNCTCC 4 cut(s) 335, 365, 633, 663
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 320, 700, 951, 1338
Bse118I RCCGGY 4 cut(s) 5, 22, 1085, 1457
Bse1I ACTGG 3 cut(s) 548, 1336, 1463
Bse3DI GCAATG 1 cut(s) 760
Bse8I GATNNNNATC 1 cut(s) 1106
BseBI CCWGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
BseCI ATCGAT 1 cut(s) 36
BseGI GGATG 8 cut(s) 574, 790, 858, 918, 1192, 1270, 1321, 1332
BseJI GATNNNNATC 1 cut(s) 1106
BseLI CCNNNNNNNGG 5 cut(s) 29, 320, 700, 951, 1338
BseMI GCAATG 1 cut(s) 760
BseMII CTCAG 5 cut(s) 267, 297, 351, 754, 1173
BseNI ACTGG 3 cut(s) 548, 1336, 1463
BseRI GAGGAG 5 cut(s) 356, 377, 524, 638, 1154
BseSI GKGCMC 2 cut(s) 1017, 1506
BseXI GCAGC 4 cut(s) 343, 706, 718, 1315
BseYI CCCAGC 2 cut(s) 301, 997
BsgI GTGCAG 1 cut(s) 1518
Bsh1285I CGRYCG 1 cut(s) 82
BshNI GGYRCC 3 cut(s) 44, 419, 1454
BshTI ACCGGT 1 cut(s) 1085
BshVI ATCGAT 1 cut(s) 36
BsiEI CGRYCG 1 cut(s) 82
BsiHKAI GWGCWC 6 cut(s) 516, 590, 678, 918, 984, 1197
BsiSI CCGG 5 cut(s) 6, 23, 819, 1086, 1458
BslFI GGGAC 2 cut(s) 33, 968
BslI CCNNNNNNNGG 5 cut(s) 29, 320, 700, 951, 1338
BsmFI GGGAC 2 cut(s) 33, 968
Bsp120I GGGCCC 1 cut(s) 1502
Bsp1286I GDGCHC 8 cut(s) 516, 590, 678, 918, 984, 1017, 1197, 1506
Bsp143I GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 2 cut(s) 171, 1494
BspCNI CTCAG 5 cut(s) 266, 298, 352, 753, 1174
BspDI ATCGAT 1 cut(s) 36
BspHI TCATGA 1 cut(s) 828
BspLI GGNNCC 8 cut(s) 21, 46, 421, 546, 619, 1294, 1456, 1504
BspMAI CTGCAG 1 cut(s) 724
BspPI GGATC 3 cut(s) 612, 625, 835
BspQI GCTCTTC 1 cut(s) 1185
BspT107I GGYRCC 3 cut(s) 44, 419, 1454
BsrDI GCAATG 1 cut(s) 760
BsrFI RCCGGY 4 cut(s) 5, 22, 1085, 1457
BsrI ACTGG 3 cut(s) 548, 1336, 1463
BssAI RCCGGY 4 cut(s) 5, 22, 1085, 1457
BssMI GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
BssNI GRCGYC 1 cut(s) 1044
BssT1I CCWWGG 3 cut(s) 375, 415, 633
Bst2UI CCWGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
Bst4CI ACNGT 5 cut(s) 83, 208, 592, 835, 1027
Bst6I CTCTTC 1 cut(s) 1185
BstACI GRCGYC 1 cut(s) 1044
BstBAI YACGTR 1 cut(s) 891
BstC8I GCNNGC 3 cut(s) 7, 1127, 1459
BstDEI CTNAG 6 cut(s) 174, 253, 306, 360, 740, 1182
BstDSI CCRYGG 1 cut(s) 375
BstEII GGTNACC 1 cut(s) 289
BstF5I GGATG 8 cut(s) 574, 790, 858, 918, 1192, 1270, 1321, 1332
BstKTI GATC 8 cut(s) 40, 93, 162, 620, 843, 1023, 1104, 1275
BstMBI GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
BstMCI CGRYCG 1 cut(s) 82
BstMWI GCNNNNNNNGC 5 cut(s) 716, 728, 913, 1220, 1325
BstNI CCWGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
BstPI GGTNACC 1 cut(s) 289
BstSCI CCNGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
BstSFI CTRYAG 1 cut(s) 720
BstSLI GKGCMC 2 cut(s) 1017, 1506
BstSNI TACGTA 1 cut(s) 891
BstV1I GCAGC 4 cut(s) 343, 706, 718, 1315
BstV2I GAAGAC 2 cut(s) 874, 1386
BstX2I RGATCY 1 cut(s) 617
BstXI CCANNNNNNTGG 1 cut(s) 1442
BstYI RGATCY 1 cut(s) 617
Bsu15I ATCGAT 1 cut(s) 36
BsuTUI ATCGAT 1 cut(s) 36
BtgI CCRYGG 1 cut(s) 375
BtgZI GCGATG 2 cut(s) 79, 1405
BtsCI GGATG 8 cut(s) 574, 790, 858, 918, 1192, 1270, 1321, 1332
BtsIMutI CAGTG 5 cut(s) 204, 243, 748, 1032, 1343
Cac8I GCNNGC 3 cut(s) 7, 1127, 1459
CciI TCATGA 1 cut(s) 828
Cfr10I RCCGGY 4 cut(s) 5, 22, 1085, 1457
ClaI ATCGAT 1 cut(s) 36
CseI GACGC 2 cut(s) 49, 1052
CsiI ACCWGGT 1 cut(s) 180
Csp6I GTAC 4 cut(s) 412, 892, 1174, 1432
CspAI ACCGGT 1 cut(s) 1085
CviAII CATG 8 cut(s) 190, 268, 316, 376, 520, 596, 829, 1246
CviQI GTAC 4 cut(s) 412, 892, 1174, 1432
DdeI CTNAG 6 cut(s) 174, 253, 306, 360, 740, 1182
DpnI GATC 8 cut(s) 39, 92, 161, 619, 842, 1022, 1103, 1274
DpnII GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
DraIII CACNNNGTG 1 cut(s) 1029
DrdI GACNNNNNNGTC 1 cut(s) 124
DriI GACNNNNNGTC 1 cut(s) 1086
DseDI GACNNNNNNGTC 1 cut(s) 124
EaeI YGGCCR 4 cut(s) 3, 24, 186, 278
Eam1104I CTCTTC 1 cut(s) 1185
Eam1105I GACNNNNNGTC 1 cut(s) 1086
EarI CTCTTC 1 cut(s) 1185
Ecl136II GAGCTC 3 cut(s) 514, 676, 982
Eco105I TACGTA 1 cut(s) 891
Eco130I CCWWGG 3 cut(s) 375, 415, 633
Eco24I GRGCYC 4 cut(s) 516, 678, 984, 1506
Eco32I GATATC 1 cut(s) 369
Eco47I GGWCC 5 cut(s) 20, 117, 379, 763, 769
Eco53kI GAGCTC 3 cut(s) 514, 676, 982
Eco91I GGTNACC 1 cut(s) 289
EcoICRI GAGCTC 3 cut(s) 514, 676, 982
EcoO109I RGGNCCY 2 cut(s) 769, 1502
EcoO65I GGTNACC 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 990
EcoRII CCWGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
EcoRV GATATC 1 cut(s) 369
EcoT14I CCWWGG 3 cut(s) 375, 415, 633
EcoT38I GRGCYC 4 cut(s) 516, 678, 984, 1506
ErhI CCWWGG 3 cut(s) 375, 415, 633
FaeI CATG 8 cut(s) 193, 271, 319, 379, 523, 599, 832, 1249
FaqI GGGAC 2 cut(s) 33, 968
FatI CATG 8 cut(s) 189, 267, 315, 375, 519, 595, 828, 1245
FblI GTMKAC 1 cut(s) 1521
Fnu4HI GCNGC 5 cut(s) 171, 357, 720, 732, 1329
FokI GGATG 8 cut(s) 581, 797, 845, 905, 1199, 1277, 1319, 1328
FriOI GRGCYC 4 cut(s) 516, 678, 984, 1506
Fsp4HI GCNGC 5 cut(s) 171, 357, 720, 732, 1329
FspBI CTAG 1 cut(s) 1343
GluI GCNGC 5 cut(s) 171, 357, 720, 732, 1329
GsaI CCCAGC 2 cut(s) 305, 1001
GsuI CTGGAG 1 cut(s) 635
HapII CCGG 5 cut(s) 6, 23, 819, 1086, 1458
HgaI GACGC 2 cut(s) 49, 1052
Hin1I GRCGYC 1 cut(s) 1044
Hin1II CATG 8 cut(s) 193, 271, 319, 379, 523, 599, 832, 1249
HincII GTYRAC 1 cut(s) 1522
HindII GTYRAC 1 cut(s) 1522
HinfI GANTC 3 cut(s) 33, 240, 455
HpaII CCGG 5 cut(s) 6, 23, 819, 1086, 1458
HphI GGTGA 7 cut(s) 133, 275, 283, 484, 758, 1096, 1102
Hpy166II GTNNAC 1 cut(s) 1522
Hpy188I TCNGA 6 cut(s) 32, 164, 533, 898, 971, 1183
Hpy188III TCNNGA 7 cut(s) 388, 430, 829, 838, 987, 1057, 1160
Hpy8I GTNNAC 1 cut(s) 1522
Hpy99I CGWCG 2 cut(s) 65, 130
HpyAV CCTTC 6 cut(s) 754, 782, 865, 926, 1198, 1384
HpyCH4III ACNGT 5 cut(s) 83, 208, 592, 835, 1027
HpyCH4IV ACGT 1 cut(s) 890
HpyCH4V TGCA 5 cut(s) 681, 722, 734, 1410, 1499
HpyF10VI GCNNNNNNNGC 5 cut(s) 716, 728, 913, 1220, 1325
HpyF3I CTNAG 6 cut(s) 174, 253, 306, 360, 740, 1182
HpySE526I ACGT 1 cut(s) 890
Hsp92I GRCGYC 1 cut(s) 1044
Hsp92II CATG 8 cut(s) 193, 271, 319, 379, 523, 599, 832, 1249
KroI GCCGGC 2 cut(s) 5, 1457
KroNI GCCGGC 2 cut(s) 7, 1459
Kzo9I GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
LguI GCTCTTC 1 cut(s) 1185
LmnI GCTCC 5 cut(s) 511, 544, 673, 1006, 1290
Lsp1109I GCAGC 4 cut(s) 343, 706, 718, 1315
LweI GCATC 8 cut(s) 157, 205, 238, 381, 559, 696, 1306, 1413
MabI ACCWGGT 1 cut(s) 180
MaeI CTAG 1 cut(s) 1343
MaeII ACGT 1 cut(s) 890
MaeIII GTNAC 3 cut(s) 263, 289, 787
MalI GATC 8 cut(s) 39, 92, 161, 619, 842, 1022, 1103, 1274
MboI GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
MboII GAAGA 9 cut(s) 652, 767, 874, 1202, 1213, 1282, 1315, 1318, 1391
MflI RGATCY 1 cut(s) 617
MhlI GDGCHC 8 cut(s) 516, 590, 678, 918, 984, 1017, 1197, 1506
MlsI TGGCCA 2 cut(s) 188, 280
MluCI AATT 2 cut(s) 735, 990
MluNI TGGCCA 2 cut(s) 188, 280
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 2 cut(s) 762, 1377
Mox20I TGGCCA 2 cut(s) 188, 280
MroNI GCCGGC 2 cut(s) 5, 1457
MscI TGGCCA 2 cut(s) 188, 280
MslI CAYNNNNRTG 2 cut(s) 81, 389
Msp20I TGGCCA 2 cut(s) 188, 280
MspA1I CMGCKG 2 cut(s) 305, 1484
MspI CCGG 5 cut(s) 6, 23, 819, 1086, 1458
MspR9I CCNGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
MvaI CCWGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
MwoI GCNNNNNNNGC 5 cut(s) 716, 728, 913, 1220, 1325
NaeI GCCGGC 2 cut(s) 7, 1459
NcoI CCATGG 1 cut(s) 375
NdeII GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
NgoMIV GCCGGC 2 cut(s) 5, 1457
NlaIII CATG 8 cut(s) 193, 271, 319, 379, 523, 599, 832, 1249
NlaIV GGNNCC 8 cut(s) 21, 46, 421, 546, 619, 1294, 1456, 1504
NmeAIII GCCGAG 3 cut(s) 21, 430, 1387
NmuCI GTSAC 2 cut(s) 263, 289
OliI CACNNNNGTG 1 cut(s) 81
PagI TCATGA 1 cut(s) 828
PasI CCCWGGG 1 cut(s) 1289
PciSI GCTCTTC 1 cut(s) 1185
PdiI GCCGGC 2 cut(s) 7, 1459
PfeI GAWTC 2 cut(s) 33, 240
PflMI CCANNNNNTGG 1 cut(s) 1338
PfoI TCCNGGA 2 cut(s) 651, 765
PinAI ACCGGT 1 cut(s) 1085
PkrI GCNGC 5 cut(s) 172, 358, 721, 733, 1330
PleI GAGTC 1 cut(s) 449
PpsI GAGTC 1 cut(s) 449
Ppu21I YACGTR 1 cut(s) 891
PpuMI RGGWCCY 1 cut(s) 769
Psp124BI GAGCTC 3 cut(s) 516, 678, 984
Psp5II RGGWCCY 1 cut(s) 769
Psp6I CCWGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
PspEI GGTNACC 1 cut(s) 289
PspFI CCCAGC 2 cut(s) 301, 997
PspGI CCWGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
PspN4I GGNNCC 8 cut(s) 21, 46, 421, 546, 619, 1294, 1456, 1504
PspOMI GGGCCC 1 cut(s) 1502
PspPPI RGGWCCY 1 cut(s) 769
PsrI GAACNNNNNNTAC 2 cut(s) 1223, 1255
PstI CTGCAG 1 cut(s) 724
PsuI RGATCY 1 cut(s) 617
PvuII CAGCTG 2 cut(s) 305, 1484
RsaI GTAC 4 cut(s) 413, 893, 1175, 1433
RsaNI GTAC 4 cut(s) 412, 892, 1174, 1432
RseI CAYNNNNRTG 2 cut(s) 81, 389
SacI GAGCTC 3 cut(s) 516, 678, 984
SalI GTCGAC 1 cut(s) 1520
SapI GCTCTTC 1 cut(s) 1185
SatI GCNGC 5 cut(s) 171, 357, 720, 732, 1329
Sau3AI GATC 8 cut(s) 37, 90, 159, 617, 840, 1020, 1101, 1272
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 9 cut(s) 107, 182, 653, 767, 909, 923, 952, 1290, 1436
SduI GDGCHC 8 cut(s) 516, 590, 678, 918, 984, 1017, 1197, 1506
SexAI ACCWGGT 1 cut(s) 180
SfaNI GCATC 8 cut(s) 157, 205, 238, 381, 559, 696, 1306, 1413
SfcI CTRYAG 1 cut(s) 720
SinI GGWCC 5 cut(s) 20, 117, 379, 763, 769
SmiMI CAYNNNNRTG 2 cut(s) 81, 389
SnaBI TACGTA 1 cut(s) 891
Sse9I AATT 2 cut(s) 735, 990
SsiI CCGC 2 cut(s) 171, 1494
SspMI CTAG 1 cut(s) 1343
SstI GAGCTC 3 cut(s) 516, 678, 984
StyD4I CCNGG 9 cut(s) 105, 180, 651, 765, 907, 921, 950, 1288, 1434
StyI CCWWGG 3 cut(s) 375, 415, 633
TaaI ACNGT 5 cut(s) 83, 208, 592, 835, 1027
TaiI ACGT 1 cut(s) 893
TaqI TCGA 3 cut(s) 36, 453, 1521
TasI AATT 2 cut(s) 735, 990
TatI WGTACW 1 cut(s) 1173
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 2 cut(s) 33, 240
TscAI CASTG 5 cut(s) 211, 250, 748, 1032, 1343
TseFI GTSAC 2 cut(s) 263, 289
TseI GCWGC 4 cut(s) 356, 719, 731, 1328
Tsp45I GTSAC 2 cut(s) 263, 289
TspDTI ATGAA 5 cut(s) 206, 284, 945, 1203, 1403
TspRI CASTG 5 cut(s) 211, 250, 748, 1032, 1343
Van91I CCANNNNNTGG 1 cut(s) 1338
VpaK11BI GGWCC 5 cut(s) 20, 117, 379, 763, 769
XapI RAATTY 1 cut(s) 990
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XmiI GTMKAC 1 cut(s) 1521
XspI CTAG 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.