MD12G1025700.v1.1
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
2761458 .. 2765111
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1025700.v1.1.491

Sequence Viewer

Length: 1641 bp
ATGATCTTTGCTTGTTACAGCAATCTATTGAAATTAAAGGTAAGAACTTTTTTTTGTTCTTCTTGTTTTAAGACGACTAAAGTTCCTGAGTTGAGAATGAGTGGAAAAGAAGGCCACGCAATTGGAATCGATCTGGGGACAACGTATTCATGTGTAGCAGTGTGGCGATATGATCATATTGAAATCATAGTGAATGGTCAGGGCAACAGAACAACTCCGTCTTATGTTGCTTTCACTGATACTGAAAGGTTAATCGGTGATGCAGCATATAACCAGGTCATTAGAAACCCCTCAAATTCAATCTTTGATGCAAAGCGATTAATTGGAAGGAGATTTGCTGACGCTTCTGTTCAAAATGATTTGAAGCTCTGGCCATTCAAGGTCACTGAAGGTCCTGATCACAAGCCCATGGTTGTGGTTACCCACAAGGGTCAAGATAAACAGTTTGCTGCTGAAGAAATCTCATCTATGGTTCTCACAAAGATGCGGGAGATTGCTGAGGCCTACCTCGGCTCAAGTGTGAAGAAAGCAGTTATTACTGTCCCTGCTTACTTTACCGACTCACAACGTCAGGCTACAAAATGTGCTGGTGTCACTGCTGGCTTAGAGGTGATGCGTATCATCAACGAACCAACTGCAGCGGCCATTGCTTATGGAATTGACAATAAGGCTGGTTGGTATAGCAAGAGAAATGTTATGATATTTGACTTGGGTGGTGGTACTTTAGATGTGTCACTGCTTACCATAAGTTCTGGTGACTTTGAAGTAAAGGCGACGGCTGGAAATACTCACCTTGGTGGTGAAGATTTTGATAACAATATGGTGAATCACTGTGTTGAGAAGTTTAAGAAGAAGCATGGTTTGGACGTCAGTGGAAACCCTAGAGCTCTTAGGAGGTTAAAAAATGAATGTGAGAAGGCGAAGAGGAGACTTTCGTTTACGTCTGCGACAGATATTGAAATTGACTGTTTGTATCAGGGTGTGGATTTTTATACAACTTTTACCCGTGCAAAATTTGAACAATTAAATATGGATTTCTTCAACAAGTGCATGGAGCCTGTGGAGAAATGTTTGGAGGATGCCAAAATGGACACAAGCGATGTCGATGATGTTGTTCTTGTTGGTGGCTCCTCTAGAATTCCCAAGGTGCAGGAGCTATTACACAACGTGTTCATCGGCAAGGAGCTGTCCAACGGCATTAATCCGGATGAGGCTGTGGCATATGGTGCTGCTGTTCAAGCTGCTGTCTTGAATGGTAATCAAAGTTTGAAGCTTCAAGACTTCACTCTCTTGGATGTTATTCCTATGTCACTTGGGACAGAATATCGTGAAGGACAGCTCAATGAGCTCATGTATGTAATGATCCCAAGAAACACCAAAATTCCCACCAAGAAGAACCATACTTTTGTAACTGGTCACGACAACCAAAGTTGTGTTTACTGTGGAGTTTACGAGGGTGAGAATGAGCTAACCAAAGATAATAATTATTTGGGTGGATTTTCCATCGGTGGCATTCCTCCAGCTCCTAAGGGTGTTGCTAAAGTAAATGTTTGCTTTTCTATTGATGCAAATGGAATCCTGAATGTTTCTGCTGAGGTCATGTCCACCGGCCAGAAGAAGGAGATTACAATCAAAAGATGA
Functional Annotation

Protein Analysis

547

Amino Acids

60.27

Weight (kDa)

7.1

Isoelectric Point (pI)

35.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 40 - 545 1.1e-209 Hsp70 protein
MreB_Mbl PF06723 162 - 412 3.2e-16 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000026)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G56410 AT3G09440 AT3G09440 AT3G09440 AT3G09440 AT3G12580 AT5G02490 AT5G02500 AT5G02500
fragaria_vesca FvH4_2g01420 FvH4_2g01790 FvH4_2g01870 FvH4_2g01900 FvH4_2g04440 FvH4_2g04830 FvH4_2g04842 FvH4_2g07600 FvH4_4g22920 FvH4_5g00700 FvH4_5g00710 FvH4_5g00890 FvH4_5g34480 FvH4_5g34480 FvH4_6g14090 FvH4_6g14090 FvH4_6g14090 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g14580 FvH4_6g41130 FvH4_7g09000 FvH4_7g09000 FvH4_7g17120 FvH4_7g17140 FvH4_7g17150 FvH4_7g17151 FvH4_7g17152 FvH4_7g17153 FvH4_7g22130 FvH4_7g22170 FvH4_7g22240 FvH4_7g22240 FvH4_7g22240 FvH4_7g22250 FvH4_7g22260 FvH4_7g22281 FvH4_7g22282 FvH4_7g22283 FvH4_7g22284 FvH4_7g22285 FvH4_7g22285 FvH4_7g22320 FvH4_7g22331 FvH4_7g22332 FvH4_7g22333 FvH4_7g22333 FvH4_7g22360 FvH4_7g22361 FvH4_7g22362 FvH4_7g22363 FvH4_7g22370 FvH4_7g22371 FvH4_7g22380 FvH4_7g22380 FvH4_7g22380
malus_domestica MD00G1207500.v1.1 MD01G1126500.v1.1 MD01G1126900.v1.1 MD01G1127200.v1.1 MD01G1127300.v1.1 MD01G1127400.v1.1 MD01G1127500.v1.1 MD01G1127600.v1.1 MD01G1127700.v1.1 MD01G1128000.v1.1 MD01G1128300.v1.1 MD01G1128500.v1.1 MD01G1128800.v1.1 MD01G1129200.v1.1 MD01G1129500.v1.1 MD01G1129700.v1.1 MD01G1129800.v1.1 MD01G1130000.v1.1 MD01G1130200.v1.1 MD01G1130300.v1.1 MD01G1130400.v1.1 MD01G1133100.v1.1 MD01G1133300.v1.1 MD01G1133400.v1.1 MD04G1125600.v1.1 MD07G1196500.v1.1 MD07G1196700.v1.1 MD07G1196800.v1.1 MD07G1197700.v1.1 MD11G1111400.v1.1 MD12G1025600.v1.1 MD12G1025700.v1.1 MD12G1025800.v1.1 MD12G1025900.v1.1 MD12G1026000.v1.1 MD14G1024500.v1.1 MD14G1024700.v1.1 MD17G1263000.v1.1
prunus_persica Prupe.2G233500_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234200_v2.0.a1 Prupe.2G234300_v2.0.a1 Prupe.2G234400_v2.0.a1 Prupe.6G079800_v2.0.a1 Prupe.6G252500_v2.0.a1 Prupe.7G106500_v2.0.a1 Prupe.7G106700_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107400_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107700_v2.0.a1 Prupe.7G107800_v2.0.a1 Prupe.7G108100_v2.0.a1 Prupe.7G108500_v2.0.a1
pyrus_communis pycom01g15230 pycom01g15270 pycom01g15310 pycom01g15320 pycom01g15340 pycom01g15410 pycom01g15420 pycom02g00470 pycom07g18460 pycom07g18470 pycom11g09200 pycom12g02530 pycom14g02400 pycom14g02410
rosa_chinensis RchiOBHm_Chr1g0344521 RchiOBHm_Chr1g0360541 RchiOBHm_Chr1g0360551 RchiOBHm_Chr1g0360561 RchiOBHm_Chr1g0365061 RchiOBHm_Chr1g0366521 RchiOBHm_Chr1g0366531 RchiOBHm_Chr1g0366641 RchiOBHm_Chr1g0366651 RchiOBHm_Chr1g0366671 RchiOBHm_Chr1g0366681 RchiOBHm_Chr1g0366691 RchiOBHm_Chr1g0366701 RchiOBHm_Chr1g0366711 RchiOBHm_Chr1g0366721 RchiOBHm_Chr1g0366731 RchiOBHm_Chr1g0366741 RchiOBHm_Chr1g0366751 RchiOBHm_Chr1g0366761 RchiOBHm_Chr1g0366801 RchiOBHm_Chr1g0366811 RchiOBHm_Chr1g0366841 RchiOBHm_Chr1g0366851 RchiOBHm_Chr1g0366861 RchiOBHm_Chr1g0366921 RchiOBHm_Chr1g0366931 RchiOBHm_Chr1g0367001 RchiOBHm_Chr2g0129341 RchiOBHm_Chr3g0466971 RchiOBHm_Chr3g0467631 RchiOBHm_Chr3g0467651 RchiOBHm_Chr4g0396291 RchiOBHm_Chr4g0419751 RchiOBHm_Chr4g0419771 RchiOBHm_Chr6g0244031 RchiOBHm_Chr6g0244041 RchiOBHm_Chr6g0244641 RchiOBHm_Chr6g0244811 RchiOBHm_Chr6g0244881 RchiOBHm_Chr6g0245051 RchiOBHm_Chr6g0245081 RchiOBHm_Chr6g0251971 RchiOBHm_Chr6g0252041 RchiOBHm_Chr6g0252111 RchiOBHm_Chr6g0252141 RchiOBHm_Chr6g0252161 RchiOBHm_Chr6g0252171 RchiOBHm_Chr6g0252381 RchiOBHm_Chr6g0252391 RchiOBHm_Chr7g0200651 RchiOBHm_Chr7g0200731 RchiOBHm_Chr7g0200831 RchiOBHm_Chr7g0200941 RchiOBHm_Chr7g0201001 RchiOBHm_Chr7g0201141 RchiOBHm_Chr7g0201161 RchiOBHm_Chr7g0201431 RchiOBHm_Chr7g0201501 RchiOBHm_Chr7g0201511 RchiOBHm_Chr7g0235101 RchiOBHm_Chr7g0242841 RchiOBHm_Chr7g0242851
rosa_laevigata RLG00000000872 RLG00000000875 RLG00000000876 RLG00000001183 RLG00000003666 RLG00000003668 RLG00000003676 RLG00000003684 RLG00000003689 RLG00000003699 RLG00000003703 RLG00000003713 RLG00000003715 RLG00000003719 RLG00000007799 RLG00000014347 RLG00000015325 RLG00000015388 RLG00000015389 RLG00000015406 RLG00000015411 RLG00000015415 RLG00000024483 RLG00000024538 RLG00000027307 RLG00000027310 RLG00000027311 RLG00000027314 RLG00000027317 RLG00000027318 RLG00000027321 RLG00000027322 RLG00000027324 RLG00000027325 RLG00000027326 RLG00000027327 RLG00000027328 RLG00000027330 RLG00000027331 RLG00000027339 RLG00000027340 RLG00000027798 RLG00000028894
rosa_multiflora Rmu_co8077254.1_g000001 Rmu_co8228455.1_g000001 Rmu_co8251579.1_g000001 Rmu_co8383367.1_g000001 Rmu_sc0000016.1_g000010 Rmu_sc0000318.1_g000001 Rmu_sc0000318.1_g000011 Rmu_sc0000318.1_g000012 Rmu_sc0000318.1_g000018 Rmu_sc0000318.1_g000025 Rmu_sc0000318.1_g000027 Rmu_sc0000318.1_g000028 Rmu_sc0000318.1_g000029 Rmu_sc0000318.1_g000030 Rmu_sc0000318.1_g000036 Rmu_sc0000318.1_g000038 Rmu_sc0000318.1_g000039 Rmu_sc0000318.1_g000047 Rmu_sc0000318.1_g000049 Rmu_sc0000318.1_g000051 Rmu_sc0000708.1_g000013 Rmu_sc0000708.1_g000024 Rmu_sc0000785.1_g000007 Rmu_sc0001171.1_g000001 Rmu_sc0001193.1_g000010 Rmu_sc0001469.1_g000007 Rmu_sc0002046.1_g000003 Rmu_sc0002046.1_g000004 Rmu_sc0002269.1_g000006 Rmu_sc0002269.1_g000017 Rmu_sc0002269.1_g000018 Rmu_sc0002269.1_g000019 Rmu_sc0002269.1_g000023 Rmu_sc0002269.1_g000024 Rmu_sc0002522.1_g000041 Rmu_sc0002522.1_g000050 Rmu_sc0002522.1_g000053 Rmu_sc0002522.1_g000063 Rmu_sc0002952.1_g000018 Rmu_sc0003180.1_g000001 Rmu_sc0003180.1_g000003 Rmu_sc0003467.1_g000006 Rmu_sc0003467.1_g000012 Rmu_sc0003467.1_g000019 Rmu_sc0004165.1_g000049 Rmu_sc0004165.1_g000052 Rmu_sc0004248.1_g000011 Rmu_sc0004248.1_g000013 Rmu_sc0005230.1_g000018 Rmu_sc0006159.1_g000001 Rmu_sc0006159.1_g000003 Rmu_sc0006159.1_g000007 Rmu_sc0006159.1_g000008 Rmu_sc0006159.1_g000010 Rmu_sc0006159.1_g000011 Rmu_sc0006159.1_g000012 Rmu_sc0006159.1_g000014 Rmu_sc0006159.1_g000020 Rmu_sc0006159.1_g000022 Rmu_sc0006553.1_g000002 Rmu_sc0006553.1_g000006 Rmu_sc0006711.1_g000004 Rmu_sc0006711.1_g000005 Rmu_sc0007085.1_g000004 Rmu_sc0007349.1_g000004 Rmu_sc0011632.1_g000007 Rmu_sc0011632.1_g000008 Rmu_sc0011632.1_g000009 Rmu_sc0011883.1_g000003 Rmu_sc0011883.1_g000004 Rmu_sc0013714.1_g000004 Rmu_sc0016540.1_g000005 Rmu_sc0016540.1_g000006 Rmu_sc0016868.1_g000006 Rmu_sc0017656.1_g000003 Rmu_sc0018109.1_g000001 Rmu_sc0023871.1_g000001 Rmu_sc0030050.1_g000002 Rmu_sc0033254.1_g000001 Rmu_sc0033687.1_g000002 Rmu_sc0033687.1_g000003 Rmu_sc0035767.1_g000001 Rmu_sc0036983.1_g000002 Rmu_ssc0000087.1_g000012 Rmu_ssc0000087.1_g000017 Rmu_ssc0000087.1_g000020 Rmu_ssc0000087.1_g000054 Rmu_ssc0000087.1_g000061 Rmu_ssc0000087.1_g000069 Rmu_ssc0000112.1_g000012 Rmu_ssc0000250.1_g000030
rosa_roxburghii Rroxscaffold_3G00222340 Rroxscaffold_3G00222360 Rroxscaffold_3G00226300 Rroxscaffold_3G00255860 Rroxscaffold_4G00289710 Rroxscaffold_4G00289750 Rroxscaffold_4G00289800 Rroxscaffold_4G00289850 Rroxscaffold_4G00290110 Rroxscaffold_4G00291510 Rroxscaffold_4G00291960 Rroxscaffold_4G00309680 Rroxscaffold_6G00413530 Rroxscaffold_7G00215460 Rroxscaffold_7G00216130 Rroxscaffold_7G00216140
rosa_rugosa Rorug01G0174500 Rorug01G0279900 Rorug01G0319300 Rorug01G0330500 Rorug01G0330600 Rorug01G0331100 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331200 Rorug01G0331300 Rorug01G0331600 Rorug01G0331700 Rorug01G0332000 Rorug01G0332100 Rorug01G0332200 Rorug01G0332300 Rorug01G0332300 Rorug01G0332300 Rorug01G0332400 Rorug01G0332400 Rorug01G0332500 Rorug01G0332600 Rorug01G0332600 Rorug01G0333000 Rorug01G0333100 Rorug01G0333500 Rorug01G0334000 Rorug01G0334000 Rorug01G0334100 Rorug01G0334100 Rorug03G0000100 Rorug03G0084400 Rorug03G0088700 Rorug03G0088800 Rorug03G0088900 Rorug04G0160400 Rorug05G0441300 Rorug05G0506700 Rorug05G0506800.1 Rorug05G0511000 Rorug05G0511700 Rorug05G0511800 Rorug05G0511900 Rorug05G0512300 Rorug07G0061300 Rorug07G0062200.1 Rorug07G0064400 Rorug07G0064500 Rorug07G0107700 Rorug07G0287500 Rorug07G0317500 Rorug07G0317600
rosa_samantha Rh1BG157600 Rh1BG300200 Rh1CG176600 Rh1CG274600 Rh1CG315200 Rh1CG315300 Rh1CG315900 Rh1CG316300 Rh1CG316400 Rh1CG316600 Rh1CG316800 Rh1CG317000 Rh1CG317100 Rh1CG317200 Rh1CG317300 Rh1DG189000 Rh2DG363900 Rh3AG132500 Rh3AG137000 Rh3AG137100 Rh3CG153600 Rh3DG154600 Rh6BG014600 Rh6BG015100 Rh6BG016900 Rh6BG017100 Rh6BG020800 Rh6BG021900 Rh6BG119900 Rh7AG186900 Rh7AG187100 Rh7AG188200 Rh7AG188600 Rh7AG191000 Rh7AG191100 Rh7AG442500 Rh7AG472400 Rh7AG472800 Rh7BG415100 Rh7DG196000 Rh7DG196200 Rh7DG432200
rosa_wichuraiana Rw0G002960 Rw0G008590 Rw0G008610 Rw0G021810 Rw0G023900 Rw0G023910 Rw0G023920 Rw0G023930 Rw0G023940 Rw0G023950 Rw0G023960 Rw0G023970 Rw0G023980 Rw0G023990 Rw0G024000 Rw0G024010 Rw1G015730 Rw1G029130 Rw1G029980 Rw1G029990 Rw1G030100 Rw1G030110 Rw1G030120 Rw1G030130 Rw1G030140 Rw1G030150 Rw1G030160 Rw1G030170 Rw1G030180 Rw1G030210 Rw1G030230 Rw1G030240 Rw3G012520 Rw3G012540 Rw3G012980 Rw3G012990 Rw3G013000 Rw6G001750 Rw6G002200 Rw6G002270 Rw6G002280 Rw6G010820 Rw6G021710 Rw7G016340 Rw7G016370 Rw7G016420 Rw7G016550 Rw7G016600 Rw7G016750 Rw7G036790 Rw7G039110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 870
AccIII TCCGGA 1 cut(s) 1204
AciI CCGC 2 cut(s) 487, 641
AclWI GGATC 1 cut(s) 1357
AcoI YGGCCR 3 cut(s) 371, 642, 1609
AcsI RAATTY 4 cut(s) 295, 1013, 1137, 1380
AcuI CTGAAG 2 cut(s) 408, 474
AcyI GRCGYC 1 cut(s) 867
AdeI CACNNNGTG 1 cut(s) 1168
AfaI GTAC 1 cut(s) 721
AfiI CCNNNNNNNGG 1 cut(s) 1618
AflIII ACRYGT 1 cut(s) 1167
AjnI CCWGG 1 cut(s) 273
AjuI GAANNNNNNNTTGG 2 cut(s) 845, 877
AleI CACNNNNGTG 1 cut(s) 795
Alw21I GWGCWC 2 cut(s) 889, 1350
Alw26I GTCTC 1 cut(s) 922
AlwI GGATC 1 cut(s) 1357
Aor13HI TCCGGA 1 cut(s) 1204
AoxI GGCC 5 cut(s) 112, 371, 501, 642, 1609
ApeKI GCWGC 5 cut(s) 263, 449, 638, 1229, 1241
ApoI RAATTY 4 cut(s) 295, 1013, 1137, 1380
AseI ATTAAT 2 cut(s) 320, 1200
AspS9I GGNCC 1 cut(s) 392
AsuHPI GGTGA 7 cut(s) 269, 622, 767, 782, 812, 835, 1469
AvaII GGWCC 1 cut(s) 392
AxyI CCTNAGG 1 cut(s) 1527
BalI TGGCCA 1 cut(s) 373
BanII GRGCYC 2 cut(s) 889, 1350
Bbv12I GWGCWC 2 cut(s) 889, 1350
BbvCI CCTCAGC 2 cut(s) 498, 1593
BbvI GCAGC 5 cut(s) 275, 436, 650, 1216, 1228
BccI CCATC 1 cut(s) 1511
BceAI ACGGC 2 cut(s) 792, 1210
BcgI CGANNNNNNTGC 2 cut(s) 617, 651
BciT130I CCWGG 1 cut(s) 275
BclI TGATCA 2 cut(s) 172, 397
BcoDI GTCTC 1 cut(s) 922
BfaI CTAG 2 cut(s) 882, 1134
BfmI CTRYAG 1 cut(s) 636
BisI GCNGC 6 cut(s) 264, 450, 639, 642, 1230, 1242
BlsI GCNGC 6 cut(s) 265, 451, 640, 643, 1231, 1243
Bme1390I CCNGG 1 cut(s) 275
Bme18I GGWCC 1 cut(s) 392
BmgT120I GGNCC 1 cut(s) 392
BmiI GGNNCC 2 cut(s) 1056, 1129
BmrFI CCNGG 1 cut(s) 275
BmsI GCATC 6 cut(s) 250, 298, 474, 603, 1069, 1555
BpmI CTGGAG 1 cut(s) 1503
Bpu10I CCTNAGC 2 cut(s) 498, 1593
BpuEI CTTGAG 1 cut(s) 499
Bsa29I ATCGAT 1 cut(s) 129
BsaBI GATNNNNATC 2 cut(s) 617, 1628
BsaHI GRCGYC 1 cut(s) 867
BsaJI CCNNGG 4 cut(s) 408, 508, 793, 1143
BsaWI WCCGGW 1 cut(s) 1204
Bsc4I CCNNNNNNNGG 1 cut(s) 1618
Bse118I RCCGGY 1 cut(s) 1607
Bse1I ACTGG 1 cut(s) 1417
Bse21I CCTNAGG 1 cut(s) 1527
Bse3DI GCAATG 1 cut(s) 645
Bse8I GATNNNNATC 2 cut(s) 617, 1628
BseAI TCCGGA 1 cut(s) 1204
BseBI CCWGG 1 cut(s) 275
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 4 cut(s) 408, 508, 793, 1143
BseGI GGATG 3 cut(s) 1084, 1213, 1300
BseJI GATNNNNATC 2 cut(s) 617, 1628
BseLI CCNNNNNNNGG 1 cut(s) 1618
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 3 cut(s) 78, 489, 1584
BseNI ACTGG 1 cut(s) 1417
BseRI GAGGAG 2 cut(s) 940, 1120
BseXI GCAGC 5 cut(s) 275, 436, 650, 1216, 1228
BsgI GTGCAG 1 cut(s) 1169
BshFI GGCC 5 cut(s) 114, 373, 503, 644, 1611
BshVI ATCGAT 1 cut(s) 129
BsiHKAI GWGCWC 2 cut(s) 889, 1350
BsiSI CCGG 2 cut(s) 1205, 1608
BslFI GGGAC 3 cut(s) 151, 527, 1330
BslI CCNNNNNNNGG 1 cut(s) 1618
BsmAI GTCTC 1 cut(s) 922
BsmFI GGGAC 3 cut(s) 151, 527, 1330
BsmI GAATGC 1 cut(s) 1512
BsnI GGCC 5 cut(s) 114, 373, 503, 644, 1611
Bsp1286I GDGCHC 2 cut(s) 889, 1350
Bsp13I TCCGGA 1 cut(s) 1204
Bsp143I GATC 5 cut(s) 3, 130, 172, 397, 1362
Bsp19I CCATGG 1 cut(s) 408
BspACI CCGC 2 cut(s) 487, 641
BspANI GGCC 5 cut(s) 114, 373, 503, 644, 1611
BspCNI CTCAG 3 cut(s) 79, 490, 1585
BspDI ATCGAT 1 cut(s) 129
BspEI TCCGGA 1 cut(s) 1204
BspLI GGNNCC 2 cut(s) 1056, 1129
BspMAI CTGCAG 1 cut(s) 640
BspPI GGATC 1 cut(s) 1357
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 1 cut(s) 1607
BsrI ACTGG 1 cut(s) 1417
BssAI RCCGGY 1 cut(s) 1607
BssECI CCNNGG 4 cut(s) 408, 508, 793, 1143
BssMI GATC 5 cut(s) 3, 130, 172, 397, 1362
BssNI GRCGYC 1 cut(s) 867
BssT1I CCWWGG 3 cut(s) 408, 793, 1143
Bst2UI CCWGG 1 cut(s) 275
Bst4CI ACNGT 5 cut(s) 444, 541, 833, 968, 1442
Bst6I CTCTTC 1 cut(s) 917
BstACI GRCGYC 1 cut(s) 867
BstAPI GCANNNNNTGC 1 cut(s) 1226
BstC8I GCNNGC 1 cut(s) 601
BstDEI CTNAG 6 cut(s) 87, 498, 604, 890, 1527, 1593
BstDSI CCRYGG 1 cut(s) 408
BstEII GGTNACC 1 cut(s) 418
BstF5I GGATG 3 cut(s) 1084, 1213, 1300
BstKTI GATC 5 cut(s) 6, 133, 175, 400, 1365
BstMAI GTCTC 1 cut(s) 922
BstMBI GATC 5 cut(s) 3, 130, 172, 397, 1362
BstMWI GCNNNNNNNGC 4 cut(s) 647, 1226, 1238, 1345
BstNI CCWGG 1 cut(s) 275
BstPI GGTNACC 1 cut(s) 418
BstSCI CCNGG 1 cut(s) 273
BstSFI CTRYAG 1 cut(s) 636
BstV1I GCAGC 5 cut(s) 275, 436, 650, 1216, 1228
BstXI CCANNNNNNTGG 2 cut(s) 122, 415
Bsu15I ATCGAT 1 cut(s) 129
Bsu36I CCTNAGG 1 cut(s) 1527
BsuRI GGCC 5 cut(s) 114, 373, 503, 644, 1611
BsuTUI ATCGAT 1 cut(s) 129
BtgI CCRYGG 1 cut(s) 408
BtgZI GCGATG 1 cut(s) 1113
BtsCI GGATG 3 cut(s) 1084, 1213, 1300
BtsI GCAGTG 3 cut(s) 165, 594, 734
BtsIMutI CAGTG 7 cut(s) 165, 234, 384, 594, 734, 829, 877
Cac8I GCNNGC 1 cut(s) 601
Cfr10I RCCGGY 1 cut(s) 1607
Cfr13I GGNCC 1 cut(s) 392
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 1 cut(s) 350
CsiI ACCWGGT 1 cut(s) 273
Csp6I GTAC 1 cut(s) 720
CviAII CATG 6 cut(s) 150, 409, 857, 1051, 1351, 1600
CviQI GTAC 1 cut(s) 720
DdeI CTNAG 6 cut(s) 87, 498, 604, 890, 1527, 1593
DpnI GATC 5 cut(s) 5, 132, 174, 399, 1364
DpnII GATC 5 cut(s) 3, 130, 172, 397, 1362
DraIII CACNNNGTG 1 cut(s) 1168
EaeI YGGCCR 3 cut(s) 371, 642, 1609
Eam1104I CTCTTC 1 cut(s) 917
EarI CTCTTC 1 cut(s) 917
Ecl136II GAGCTC 2 cut(s) 887, 1348
Eco130I CCWWGG 3 cut(s) 408, 793, 1143
Eco147I AGGCCT 1 cut(s) 503
Eco24I GRGCYC 2 cut(s) 889, 1350
Eco47I GGWCC 1 cut(s) 392
Eco53kI GAGCTC 2 cut(s) 887, 1348
Eco57I CTGAAG 2 cut(s) 408, 474
Eco81I CCTNAGG 1 cut(s) 1527
Eco91I GGTNACC 1 cut(s) 418
EcoICRI GAGCTC 2 cut(s) 887, 1348
EcoO109I RGGNCCY 1 cut(s) 392
EcoO65I GGTNACC 1 cut(s) 418
EcoRI GAATTC 1 cut(s) 1137
EcoRII CCWGG 1 cut(s) 273
EcoT14I CCWWGG 3 cut(s) 408, 793, 1143
EcoT38I GRGCYC 2 cut(s) 889, 1350
ErhI CCWWGG 3 cut(s) 408, 793, 1143
FaeI CATG 6 cut(s) 153, 412, 860, 1054, 1354, 1603
FaqI GGGAC 3 cut(s) 151, 527, 1330
FatI CATG 6 cut(s) 149, 408, 856, 1050, 1350, 1599
FauI CCCGC 1 cut(s) 480
FauNDI CATATG 1 cut(s) 1222
FbaI TGATCA 2 cut(s) 172, 397
Fnu4HI GCNGC 6 cut(s) 264, 450, 639, 642, 1230, 1242
FokI GGATG 3 cut(s) 1091, 1220, 1307
FriOI GRGCYC 2 cut(s) 889, 1350
Fsp4HI GCNGC 6 cut(s) 264, 450, 639, 642, 1230, 1242
FspBI CTAG 2 cut(s) 882, 1134
GluI GCNGC 6 cut(s) 264, 450, 639, 642, 1230, 1242
GsuI CTGGAG 1 cut(s) 1503
HaeIII GGCC 5 cut(s) 114, 373, 503, 644, 1611
HapII CCGG 2 cut(s) 1205, 1608
HgaI GACGC 1 cut(s) 350
Hin1I GRCGYC 1 cut(s) 867
Hin1II CATG 6 cut(s) 153, 412, 860, 1054, 1354, 1603
HindIII AAGCTT 1 cut(s) 1271
HinfI GANTC 4 cut(s) 126, 560, 826, 1575
HpaII CCGG 2 cut(s) 1205, 1608
HphI GGTGA 7 cut(s) 269, 622, 767, 782, 812, 835, 1469
Hpy166II GTNNAC 4 cut(s) 939, 1438, 1450, 1605
Hpy8I GTNNAC 4 cut(s) 939, 1438, 1450, 1605
Hpy99I CGWCG 1 cut(s) 778
HpyAV CCTTC 6 cut(s) 104, 321, 383, 910, 1325, 1612
HpyCH4III ACNGT 5 cut(s) 444, 541, 833, 968, 1442
HpyCH4IV ACGT 5 cut(s) 143, 568, 867, 941, 1167
HpyCH4V TGCA 7 cut(s) 263, 311, 638, 1010, 1050, 1150, 1568
HpyF10VI GCNNNNNNNGC 4 cut(s) 647, 1226, 1238, 1345
HpyF3I CTNAG 6 cut(s) 87, 498, 604, 890, 1527, 1593
HpySE526I ACGT 5 cut(s) 143, 568, 867, 941, 1167
Hsp92I GRCGYC 1 cut(s) 867
Hsp92II CATG 6 cut(s) 153, 412, 860, 1054, 1354, 1603
Kpn2I TCCGGA 1 cut(s) 1204
Ksp22I TGATCA 2 cut(s) 172, 397
Kzo9I GATC 5 cut(s) 3, 130, 172, 397, 1362
LmnI GCTCC 5 cut(s) 1054, 1133, 1153, 1183, 1528
Lsp1109I GCAGC 5 cut(s) 275, 436, 650, 1216, 1228
LweI GCATC 6 cut(s) 250, 298, 474, 603, 1069, 1555
MabI ACCWGGT 1 cut(s) 273
MaeI CTAG 2 cut(s) 882, 1134
MaeII ACGT 5 cut(s) 143, 568, 867, 941, 1167
MaeIII GTNAC 9 cut(s) 14, 382, 418, 592, 732, 755, 1308, 1408, 1415
MalI GATC 5 cut(s) 5, 132, 174, 399, 1364
MboI GATC 5 cut(s) 3, 130, 172, 397, 1362
MboII GAAGA 9 cut(s) 51, 467, 535, 815, 862, 934, 1030, 1405, 1627
MfeI CAATTG 1 cut(s) 120
MhlI GDGCHC 2 cut(s) 889, 1350
MlsI TGGCCA 1 cut(s) 373
MluNI TGGCCA 1 cut(s) 373
MlyI GAGTC 1 cut(s) 554
MmeI TCCRAC 1 cut(s) 1215
Mox20I TGGCCA 1 cut(s) 373
MroI TCCGGA 1 cut(s) 1204
MscI TGGCCA 1 cut(s) 373
MseI TTAA 8 cut(s) 35, 69, 251, 320, 846, 899, 1025, 1200
MslI CAYNNNNRTG 3 cut(s) 413, 482, 795
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 2 cut(s) 1205, 1608
MspR9I CCNGG 1 cut(s) 275
MunI CAATTG 1 cut(s) 120
Mva1269I GAATGC 1 cut(s) 1512
MvaI CCWGG 1 cut(s) 275
MwoI GCNNNNNNNGC 4 cut(s) 647, 1226, 1238, 1345
NcoI CCATGG 1 cut(s) 408
NdeI CATATG 1 cut(s) 1222
NdeII GATC 5 cut(s) 3, 130, 172, 397, 1362
NlaIII CATG 6 cut(s) 153, 412, 860, 1054, 1354, 1603
NlaIV GGNNCC 2 cut(s) 1056, 1129
NmeAIII GCCGAG 1 cut(s) 489
NmuCI GTSAC 6 cut(s) 382, 592, 732, 755, 1308, 1415
OliI CACNNNNGTG 1 cut(s) 795
PceI AGGCCT 1 cut(s) 503
PctI GAATGC 1 cut(s) 1512
PfeI GAWTC 3 cut(s) 126, 826, 1575
PkrI GCNGC 6 cut(s) 265, 451, 640, 643, 1231, 1243
PleI GAGTC 1 cut(s) 554
PpsI GAGTC 1 cut(s) 554
PpuMI RGGWCCY 1 cut(s) 392
PshBI ATTAAT 2 cut(s) 320, 1200
Psp124BI GAGCTC 2 cut(s) 889, 1350
Psp5II RGGWCCY 1 cut(s) 392
Psp6I CCWGG 1 cut(s) 273
PspEI GGTNACC 1 cut(s) 418
PspGI CCWGG 1 cut(s) 273
PspN4I GGNNCC 2 cut(s) 1056, 1129
PspPI GGNCC 1 cut(s) 392
PspPPI RGGWCCY 1 cut(s) 392
PstI CTGCAG 1 cut(s) 640
RsaI GTAC 1 cut(s) 721
RsaNI GTAC 1 cut(s) 720
RseI CAYNNNNRTG 3 cut(s) 413, 482, 795
SacI GAGCTC 2 cut(s) 889, 1350
SaqAI TTAA 8 cut(s) 35, 69, 251, 320, 846, 899, 1025, 1200
SatI GCNGC 6 cut(s) 264, 450, 639, 642, 1230, 1242
Sau3AI GATC 5 cut(s) 3, 130, 172, 397, 1362
Sau96I GGNCC 1 cut(s) 392
SchI GAGTC 1 cut(s) 554
ScrFI CCNGG 1 cut(s) 275
SduI GDGCHC 2 cut(s) 889, 1350
SexAI ACCWGGT 1 cut(s) 273
SfaNI GCATC 6 cut(s) 250, 298, 474, 603, 1069, 1555
SfcI CTRYAG 1 cut(s) 636
SinI GGWCC 1 cut(s) 392
SmiMI CAYNNNNRTG 3 cut(s) 413, 482, 795
SmlI CTYRAG 1 cut(s) 514
SmoI CTYRAG 1 cut(s) 514
SseBI AGGCCT 1 cut(s) 503
SsiI CCGC 2 cut(s) 487, 641
SspMI CTAG 2 cut(s) 882, 1134
SstI GAGCTC 2 cut(s) 889, 1350
StuI AGGCCT 1 cut(s) 503
StyD4I CCNGG 1 cut(s) 273
StyI CCWWGG 3 cut(s) 408, 793, 1143
TaaI ACNGT 5 cut(s) 444, 541, 833, 968, 1442
TaiI ACGT 5 cut(s) 146, 571, 870, 944, 1170
TaqI TCGA 2 cut(s) 129, 1104
TauI GCSGC 1 cut(s) 644
TfiI GAWTC 3 cut(s) 126, 826, 1575
Tru1I TTAA 8 cut(s) 35, 69, 251, 320, 846, 899, 1025, 1200
Tru9I TTAA 8 cut(s) 35, 69, 251, 320, 846, 899, 1025, 1200
TscAI CASTG 7 cut(s) 165, 241, 391, 601, 741, 836, 877
TseFI GTSAC 6 cut(s) 382, 592, 732, 755, 1308, 1415
TseI GCWGC 5 cut(s) 263, 449, 638, 1229, 1241
Tsp45I GTSAC 6 cut(s) 382, 592, 732, 755, 1308, 1415
TspDTI ATGAA 3 cut(s) 138, 921, 1162
TspGWI ACGGA 1 cut(s) 207
TspRI CASTG 7 cut(s) 165, 241, 391, 601, 741, 836, 877
VpaK11BI GGWCC 1 cut(s) 392
VspI ATTAAT 2 cut(s) 320, 1200
XapI RAATTY 4 cut(s) 295, 1013, 1137, 1380
XbaI TCTAGA 1 cut(s) 1133
XspI CTAG 2 cut(s) 882, 1134
ZraI GACGTC 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.