FvH4_7g28920

ABC transporter B family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
21353870 .. 21358981
5112 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28920.t2

Sequence Viewer

Length: 2118 bp
ATGACCTCCGTCACGCTCTCCCTCCCACTCACTCCCGTCTCCACGCGCCTCCGCACAACCGATTCCCGACTCGCCTCCCTCTACCAACCTCTCCGCCAATCATACTCCTTCCCGCGCTTCTCACTCCACCGCCTCCCTAACCTCACCCCCGCCTCCGCCTACGTGTCCGGACCCGCCTCCGACCCGATTGTCACCGAGCCCGACCCGAAGTTCGACGAGCCGGACTCCAAGCTCCAGCCGCCGAGTGTGATTAGCTGGGGGTTACTCTGGAGCCTTCTCCTGAAGCACAAGCTCAGACTGGCAATTTCCACTTTTGCCCTCGTCGGCTGCAGCGCCTGCACTCTTTCAATGCCGATATTTTCAGGACGGTTTTTCGAAGTTCTGATAGGGAAGAGAACAGAGGCATTGTGGACATTGCTGAGTAAAGTCGGAGTTTTGTATGCGTTGGAGCCGATTTTAACTGTTGTTTTCGTTGTCAATATGAATACTGTATGGGAAAAGGTCATGTCCACGCTTAGAGCTCAAATTTTCGGCAGGGTTTTGATTCAGAAGGTCGAGTTTTTTGATCGTTACAAGGTTGGTGAACTGACGGGATTGTTAACATCTGATTTGGGTTCTCTGAAAAATGTTGTGAGTGAAAACATTTCAAGGGACCGCGGATTCAGGGCACTTACTGAGGTTACTGGGACAATGTGCATACTCTTTGTTTTGGCTCCCCAACTTGCACCGATCCTTGGGGTTCTGATGCTCACCGTTTCTGTTTTAGTTGCTTTGTACAAGAGATCAACTGTACCTGTTTTCAAGGCGCATGGAATGGCTCAAGCATTCATAGCTGATTGTGTGACAGAAACTTTTTCTGCAATACGTACTGTAAGATCCTTTGGTGGGGAAAAGCGCCAAATGCTAATGTTTGGTAAACAGGTGCTAGCTTACCAGAGCAGTGGAATAAAGCTTGGGGTTTTCAAATCCATAAATGAATCGTTGACTAGAGTTGTTGTGTATATATCTCTTTTGGCCTTATATGCTCTTGGAGGAAGCAAAGTGAAGGCGGGTGAACTCTCTGTTGGAACTGTGGCTTCTTTTATTGGTTATACTTTCACATTAACATTCGCGGTTCAAGGCCTGGTTAATACATTTGGAGATCTTCGTGGAACTTTTGCTGCAGTGGAGAGGATTAACTCTGTTTTATCAGGGGTAGAAATCGATGAAGCCCTTGCTTATGGCTTAGAAAAGGAAATGCAACAAAATAAATTACTTGATGAAAATTACAGATTGTTCCTCATCGATGGTTCCTATGAGAAAAATCAGTCTGTAAATACGCATTACATGTCAGCTCTGAAATCAGCTAGCAATGTTGGACGCTTAGCTTGGTCTGGCGATGTTTGTCTTGAAGATGTGCATTTCTCTTATCCTTTGAGACCTGATGTAGAAATTCTGAATGGTCTAAATCTAACGCTAAAGTGTGGAACTGTAACTGCTCTAGTTGGTTCCAGCGGTGCTGGAAAAAGTACTGTTGTACAGCTATTGGCACGTTTCTATGAGCCAACTACAGGTCGTATAACAGTTGGAGGAGAGGATGTCCGGACATTTGACAAGAGTGAATGGGCACGAGTCGTGTCAATAGTGAATCAGGAACCCGTTCTTTTCTCGGTATCAGTTGGTGAAAATATTGCATATGGGCTTCCAGATGATCATGTATCCAAGGATGATGTGATAAAGGCTGCAAAAGCTGCAAATGCTCATGAATTCATAATTTCACTTCCACAGGGTTATGATACACTAGTTGGTGAACGTGGAGGGCTACTTAGTGGTGGCCAGAGACAGAGAATTGCTATTGCAAGAGCACTGCTTAAGAATTCCCCAATCCTTATACTTGATGAGGCCACCAGTGCATTGGATGCAGTTAGTGAGCGCCTAGTCCAAGATGCGTTGAATCATCTAATGAAACGGCGGACAACGTTGGTGATTGCTCACCGGTTAAGCACAGTCCAAAATGCCCATCAAATTGCATTGTGCTCCGAGGGTAAGATAACTGAGCTTGGGACACACTCTGAACTATTGGCCAAGAAAGGTCAATATGCTTCATTGGTTGGCACTCAAAGACTTGCATTTGAGTGA

Protein Analysis

706

Amino Acids

76.96

Weight (kDa)

8.98

Isoelectric Point (pI)

33.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 100 - 371 4e-36 ABC transporter transmembrane region
ABC_tran PF00005 479 - 514 2.5e-07 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013456)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 188
AccII CGCG 4 cut(s) 46, 115, 657, 1112
AccIII TCCGGA 2 cut(s) 167, 1581
AclI AACGTT 1 cut(s) 1958
AclWI GGATC 2 cut(s) 724, 870
AcoI YGGCCR 2 cut(s) 1813, 2061
AcsI RAATTY 4 cut(s) 525, 1431, 1745, 1855
AcuI CTGAAG 1 cut(s) 302
AfaI GTAC 5 cut(s) 776, 792, 868, 1510, 1518
AfiI CCNNNNNNNGG 3 cut(s) 734, 885, 1550
AflII CTTAAG 1 cut(s) 1850
AflIII ACRYGT 2 cut(s) 162, 1326
AgeI ACCGGT 1 cut(s) 1974
AgsI TTSAA 7 cut(s) 348, 648, 802, 964, 1118, 1391, 1933
AhlI ACTAGT 1 cut(s) 1780
AjnI CCWGG 1 cut(s) 1122
AjuI GAANNNNNNNTTGG 2 cut(s) 1047, 1079
Alw21I GWGCWC 3 cut(s) 523, 1846, 2018
Alw26I GTCTC 3 cut(s) 43, 1411, 1813
AlwI GGATC 2 cut(s) 724, 870
AlwNI CAGNNNCTG 1 cut(s) 336
Aor13HI TCCGGA 2 cut(s) 167, 1581
AoxI GGCC 5 cut(s) 1014, 1120, 1813, 1881, 2061
ApeKI GCWGC 5 cut(s) 327, 330, 1160, 1721, 1730
ApoI RAATTY 4 cut(s) 525, 1431, 1745, 1855
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AsiGI ACCGGT 1 cut(s) 1974
Asp700I GAANNNNTTC 1 cut(s) 1638
AspLEI GCGC 6 cut(s) 48, 117, 335, 808, 897, 1914
AspS9I GGNCC 2 cut(s) 170, 652
AsuHPI GGTGA 9 cut(s) 136, 184, 593, 742, 1064, 1673, 1799, 1964, 1975
AsuII TTCGAA 1 cut(s) 375
AsuNHI GCTAGC 2 cut(s) 925, 1346
AvaII GGWCC 2 cut(s) 170, 652
BaeGI GKGCMC 2 cut(s) 670, 1609
BaeI ACNNNNGTAYC 2 cut(s) 1767, 1800
BalI TGGCCA 2 cut(s) 1815, 2063
BanII GRGCYC 2 cut(s) 201, 523
BauI CACGAG 1 cut(s) 1608
Bbv12I GWGCWC 3 cut(s) 523, 1846, 2018
BbvI GCAGC 5 cut(s) 314, 342, 1147, 1708, 1717
BccI CCATC 2 cut(s) 1280, 2007
BceAI ACGGC 1 cut(s) 1964
BciT130I CCWGG 1 cut(s) 1124
BciVI GTATCC 1 cut(s) 1708
BclI TGATCA 1 cut(s) 1690
BcoDI GTCTC 3 cut(s) 43, 1411, 1813
BcuI ACTAGT 1 cut(s) 1780
BfaI CTAG 6 cut(s) 926, 987, 1347, 1481, 1781, 1916
BfmI CTRYAG 3 cut(s) 328, 1161, 1548
BfoI RGCGCY 3 cut(s) 336, 898, 1915
BfrI CTTAAG 1 cut(s) 1850
BfuI GTATCC 1 cut(s) 1708
BglII AGATCT 1 cut(s) 1141
BisI GCNGC 6 cut(s) 239, 328, 331, 1161, 1722, 1731
BlpI GCTNAGC 1 cut(s) 1363
BlsI GCNGC 6 cut(s) 240, 329, 332, 1162, 1723, 1732
BmcAI AGTACT 1 cut(s) 1510
Bme1390I CCNGG 1 cut(s) 1124
Bme18I GGWCC 2 cut(s) 170, 652
BmgT120I GGNCC 2 cut(s) 170, 652
BmiI GGNNCC 8 cut(s) 172, 272, 450, 653, 714, 1291, 1489, 1635
BmrFI CCNGG 1 cut(s) 1124
BmrI ACTGGG 1 cut(s) 693
BmsI GCATC 3 cut(s) 735, 1888, 1915
BmtI GCTAGC 2 cut(s) 929, 1350
BmuI ACTGGG 1 cut(s) 693
BoxI GACNNNNGTC 1 cut(s) 8
BplI GAGNNNNNCTC 2 cut(s) 209, 241
BpmI CTGGAG 2 cut(s) 218, 289
Bpu1102I GCTNAGC 1 cut(s) 1363
Bpu14I TTCGAA 1 cut(s) 375
BpuEI CTTGAG 1 cut(s) 804
Bsa29I ATCGAT 2 cut(s) 1203, 1284
BsaAI YACGTR 2 cut(s) 163, 866
BsaI GGTCTC 1 cut(s) 1411
BsaJI CCNNGG 4 cut(s) 655, 733, 1701, 2019
BsaWI WCCGGW 3 cut(s) 167, 1581, 1974
BsaXI ACNNNNNCTCC 2 cut(s) 1563, 1593
Bsc4I CCNNNNNNNGG 3 cut(s) 734, 885, 1550
Bse118I RCCGGY 1 cut(s) 1974
Bse1I ACTGG 3 cut(s) 303, 688, 1887
Bse3DI GCAATG 2 cut(s) 413, 1357
BseAI TCCGGA 2 cut(s) 167, 1581
BseBI CCWGG 1 cut(s) 1124
BseCI ATCGAT 2 cut(s) 1203, 1284
BseDI CCNNGG 4 cut(s) 655, 733, 1701, 2019
BseGI GGATG 3 cut(s) 1582, 1711, 1903
BseLI CCNNNNNNNGG 3 cut(s) 734, 885, 1550
BseMI GCAATG 2 cut(s) 413, 1357
BseMII CTCAG 4 cut(s) 307, 410, 666, 2025
BseNI ACTGG 3 cut(s) 303, 688, 1887
BseRI GAGGAG 1 cut(s) 1584
BseSI GKGCMC 2 cut(s) 670, 1609
BseXI GCAGC 5 cut(s) 314, 342, 1147, 1708, 1717
BseYI CCCAGC 1 cut(s) 255
BsgI GTGCAG 1 cut(s) 322
Bsh1236I CGCG 4 cut(s) 46, 115, 657, 1112
BshFI GGCC 5 cut(s) 1016, 1122, 1815, 1883, 2063
BshTI ACCGGT 1 cut(s) 1974
BshVI ATCGAT 2 cut(s) 1203, 1284
BsiHKAI GWGCWC 3 cut(s) 523, 1846, 2018
BsiSI CCGG 4 cut(s) 168, 221, 1582, 1975
BslFI GGGAC 3 cut(s) 665, 700, 2056
BslI CCNNNNNNNGG 3 cut(s) 734, 885, 1550
BsmAI GTCTC 3 cut(s) 43, 1411, 1813
BsmBI CGTCTC 1 cut(s) 43
BsmFI GGGAC 3 cut(s) 665, 700, 2056
BsmI GAATGC 1 cut(s) 824
BsnI GGCC 5 cut(s) 1016, 1122, 1815, 1883, 2063
Bso31I GGTCTC 1 cut(s) 1411
Bsp119I TTCGAA 1 cut(s) 375
Bsp1286I GDGCHC 6 cut(s) 201, 523, 670, 1609, 1846, 2018
Bsp13I TCCGGA 2 cut(s) 167, 1581
Bsp1407I TGTACA 2 cut(s) 774, 1516
Bsp143I GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
Bsp1720I GCTNAGC 1 cut(s) 1363
BspANI GGCC 5 cut(s) 1016, 1122, 1815, 1883, 2063
BspCNI CTCAG 4 cut(s) 306, 411, 667, 2026
BspDI ATCGAT 2 cut(s) 1203, 1284
BspEI TCCGGA 2 cut(s) 167, 1581
BspFNI CGCG 4 cut(s) 46, 115, 657, 1112
BspHI TCATGA 1 cut(s) 1741
BspLI GGNNCC 8 cut(s) 172, 272, 450, 653, 714, 1291, 1489, 1635
BspMAI CTGCAG 2 cut(s) 332, 1165
BspOI GCTAGC 2 cut(s) 929, 1350
BspPI GGATC 2 cut(s) 724, 870
BspT104I TTCGAA 1 cut(s) 375
BspTI CTTAAG 1 cut(s) 1850
BspTNI GGTCTC 1 cut(s) 1411
BsrDI GCAATG 2 cut(s) 413, 1357
BsrFI RCCGGY 1 cut(s) 1974
BsrGI TGTACA 2 cut(s) 774, 1516
BsrI ACTGG 3 cut(s) 303, 688, 1887
BssAI RCCGGY 1 cut(s) 1974
BssECI CCNNGG 4 cut(s) 655, 733, 1701, 2019
BssMI GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
BssSI CACGAG 1 cut(s) 1608
BssT1I CCWWGG 2 cut(s) 733, 1701
Bst2BI CACGAG 1 cut(s) 1608
Bst2UI CCWGG 1 cut(s) 1124
Bst6I CTCTTC 1 cut(s) 386
BstAFI CTTAAG 1 cut(s) 1850
BstAPI GCANNNNNTGC 3 cut(s) 336, 1730, 1898
BstAUI TGTACA 2 cut(s) 774, 1516
BstBAI YACGTR 2 cut(s) 163, 866
BstBI TTCGAA 1 cut(s) 375
BstC8I GCNNGC 3 cut(s) 337, 927, 1348
BstDEI CTNAG 8 cut(s) 293, 419, 515, 675, 1225, 1363, 1805, 2034
BstDSI CCRYGG 1 cut(s) 655
BstF5I GGATG 3 cut(s) 1582, 1711, 1903
BstFNI CGCG 4 cut(s) 46, 115, 657, 1112
BstH2I RGCGCY 3 cut(s) 336, 898, 1915
BstHHI GCGC 6 cut(s) 48, 117, 335, 808, 897, 1914
BstKTI GATC 6 cut(s) 568, 732, 785, 878, 1144, 1693
BstMAI GTCTC 3 cut(s) 43, 1411, 1813
BstMBI GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
BstNI CCWGG 1 cut(s) 1124
BstNSI RCATGY 1 cut(s) 1330
BstPAI GACNNNNGTC 1 cut(s) 8
BstSCI CCNGG 1 cut(s) 1122
BstSFI CTRYAG 3 cut(s) 328, 1161, 1548
BstSLI GKGCMC 2 cut(s) 670, 1609
BstSNI TACGTA 1 cut(s) 866
BstUI CGCG 4 cut(s) 46, 115, 657, 1112
BstV1I GCAGC 5 cut(s) 314, 342, 1147, 1708, 1717
BstX2I RGATCY 2 cut(s) 875, 1141
BstXI CCANNNNNNTGG 2 cut(s) 941, 1894
BstYI RGATCY 2 cut(s) 875, 1141
Bsu15I ATCGAT 2 cut(s) 1203, 1284
BsuI GTATCC 1 cut(s) 1708
BsuRI GGCC 5 cut(s) 1016, 1122, 1815, 1883, 2063
BsuTUI ATCGAT 2 cut(s) 1203, 1284
BtgI CCRYGG 1 cut(s) 655
BtgZI GCGATG 1 cut(s) 1392
BtsCI GGATG 3 cut(s) 1582, 1711, 1903
BtsI GCAGTG 3 cut(s) 946, 1170, 1844
BtsIMutI CAGTG 4 cut(s) 946, 1170, 1844, 1894
Cac8I GCNNGC 3 cut(s) 337, 927, 1348
CaiI CAGNNNCTG 1 cut(s) 336
CciI TCATGA 1 cut(s) 1741
CfoI GCGC 6 cut(s) 48, 117, 335, 808, 897, 1914
Cfr10I RCCGGY 1 cut(s) 1974
Cfr13I GGNCC 2 cut(s) 170, 652
Cfr42I CCGCGG 1 cut(s) 658
ClaI ATCGAT 2 cut(s) 1203, 1284
CseI GACGC 1 cut(s) 1368
Csp6I GTAC 5 cut(s) 775, 791, 867, 1509, 1517
CspAI ACCGGT 1 cut(s) 1974
CviAII CATG 5 cut(s) 505, 809, 1327, 1694, 1742
CviQI GTAC 5 cut(s) 775, 791, 867, 1509, 1517
DdeI CTNAG 8 cut(s) 293, 419, 515, 675, 1225, 1363, 1805, 2034
DpnI GATC 6 cut(s) 567, 731, 784, 877, 1143, 1692
DpnII GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
DrdI GACNNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 2 cut(s) 1813, 2061
Eam1104I CTCTTC 1 cut(s) 386
EarI CTCTTC 1 cut(s) 386
EciI GGCGGA 3 cut(s) 83, 145, 1966
Ecl136II GAGCTC 1 cut(s) 521
Eco105I TACGTA 1 cut(s) 866
Eco130I CCWWGG 2 cut(s) 733, 1701
Eco147I AGGCCT 1 cut(s) 1122
Eco24I GRGCYC 2 cut(s) 201, 523
Eco31I GGTCTC 1 cut(s) 1411
Eco47I GGWCC 2 cut(s) 170, 652
Eco53kI GAGCTC 1 cut(s) 521
Eco57I CTGAAG 1 cut(s) 302
EcoICRI GAGCTC 1 cut(s) 521
EcoRI GAATTC 2 cut(s) 1745, 1855
EcoRII CCWGG 1 cut(s) 1122
EcoT14I CCWWGG 2 cut(s) 733, 1701
EcoT38I GRGCYC 2 cut(s) 201, 523
ErhI CCWWGG 2 cut(s) 733, 1701
Esp3I CGTCTC 1 cut(s) 43
FaeI CATG 5 cut(s) 508, 812, 1330, 1697, 1745
FaqI GGGAC 3 cut(s) 665, 700, 2056
FatI CATG 5 cut(s) 504, 808, 1326, 1693, 1741
FauI CCCGC 4 cut(s) 120, 157, 181, 1042
FauNDI CATATG 1 cut(s) 1675
FbaI TGATCA 1 cut(s) 1690
Fnu4HI GCNGC 6 cut(s) 239, 328, 331, 1161, 1722, 1731
FokI GGATG 3 cut(s) 1589, 1718, 1910
FriOI GRGCYC 2 cut(s) 201, 523
Fsp4HI GCNGC 6 cut(s) 239, 328, 331, 1161, 1722, 1731
FspBI CTAG 6 cut(s) 926, 987, 1347, 1481, 1781, 1916
GlaI GCGC 6 cut(s) 47, 116, 334, 807, 896, 1913
GluI GCNGC 6 cut(s) 239, 328, 331, 1161, 1722, 1731
GsaI CCCAGC 1 cut(s) 259
GsuI CTGGAG 2 cut(s) 218, 289
HaeII RGCGCY 3 cut(s) 336, 898, 1915
HaeIII GGCC 5 cut(s) 1016, 1122, 1815, 1883, 2063
HapII CCGG 4 cut(s) 168, 221, 1582, 1975
HgaI GACGC 1 cut(s) 1368
HhaI GCGC 6 cut(s) 48, 117, 335, 808, 897, 1914
Hin1II CATG 5 cut(s) 508, 812, 1330, 1697, 1745
Hin6I GCGC 6 cut(s) 46, 115, 333, 806, 895, 1912
HinP1I GCGC 6 cut(s) 46, 115, 333, 806, 895, 1912
HincII GTYRAC 2 cut(s) 600, 984
HindII GTYRAC 2 cut(s) 600, 984
HindIII AAGCTT 1 cut(s) 950
HinfI GANTC 9 cut(s) 62, 69, 224, 544, 660, 977, 1611, 1627, 1933
HpaI GTTAAC 1 cut(s) 600
HpaII CCGG 4 cut(s) 168, 221, 1582, 1975
HphI GGTGA 9 cut(s) 136, 184, 593, 742, 1064, 1673, 1799, 1964, 1975
Hpy166II GTNNAC 8 cut(s) 411, 510, 584, 600, 917, 984, 1055, 1790
Hpy8I GTNNAC 8 cut(s) 411, 510, 584, 600, 917, 984, 1055, 1790
Hpy99I CGWCG 2 cut(s) 218, 326
HpyAV CCTTC 4 cut(s) 118, 284, 544, 1039
HpyCH4IV ACGT 5 cut(s) 162, 865, 1531, 1792, 1958
HpyF3I CTNAG 8 cut(s) 293, 419, 515, 675, 1225, 1363, 1805, 2034
HpySE526I ACGT 5 cut(s) 162, 865, 1531, 1792, 1958
Hsp92II CATG 5 cut(s) 508, 812, 1330, 1697, 1745
HspAI GCGC 6 cut(s) 46, 115, 333, 806, 895, 1912
Kpn2I TCCGGA 2 cut(s) 167, 1581
Ksp22I TGATCA 1 cut(s) 1690
KspAI GTTAAC 1 cut(s) 600
KspI CCGCGG 1 cut(s) 658
Kzo9I GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
LmnI GCTCC 5 cut(s) 237, 270, 448, 718, 2021
Lsp1109I GCAGC 5 cut(s) 314, 342, 1147, 1708, 1717
LweI GCATC 3 cut(s) 735, 1888, 1915
MaeI CTAG 6 cut(s) 926, 987, 1347, 1481, 1781, 1916
MaeII ACGT 5 cut(s) 162, 865, 1531, 1792, 1958
MaeIII GTNAC 7 cut(s) 10, 190, 261, 569, 679, 841, 1471
MalI GATC 6 cut(s) 567, 731, 784, 877, 1143, 1692
MboI GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
MboII GAAGA 3 cut(s) 403, 1136, 1403
MflI RGATCY 2 cut(s) 875, 1141
MhlI GDGCHC 6 cut(s) 201, 523, 670, 1609, 1846, 2018
MlsI TGGCCA 2 cut(s) 1815, 2063
MluNI TGGCCA 2 cut(s) 1815, 2063
MlyI GAGTC 3 cut(s) 63, 218, 1620
MmeI TCCRAC 6 cut(s) 204, 409, 426, 1045, 1336, 1546
Mox20I TGGCCA 2 cut(s) 1815, 2063
MroI TCCGGA 2 cut(s) 167, 1581
MroXI GAANNNNTTC 1 cut(s) 1638
MscI TGGCCA 2 cut(s) 1815, 2063
MseI TTAA 7 cut(s) 458, 599, 1103, 1128, 1176, 1851, 1979
MslI CAYNNNNRTG 1 cut(s) 2113
Msp20I TGGCCA 2 cut(s) 1815, 2063
MspA1I CMGCKG 2 cut(s) 657, 1494
MspCI CTTAAG 1 cut(s) 1850
MspI CCGG 4 cut(s) 168, 221, 1582, 1975
MspR9I CCNGG 1 cut(s) 1124
Mva1269I GAATGC 1 cut(s) 824
MvaI CCWGG 1 cut(s) 1124
MvnI CGCG 4 cut(s) 46, 115, 657, 1112
NdeI CATATG 1 cut(s) 1675
NdeII GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
NheI GCTAGC 2 cut(s) 925, 1346
NlaIII CATG 5 cut(s) 508, 812, 1330, 1697, 1745
NlaIV GGNNCC 8 cut(s) 172, 272, 450, 653, 714, 1291, 1489, 1635
NmeAIII GCCGAG 1 cut(s) 267
NmuCI GTSAC 3 cut(s) 10, 190, 841
NspI RCATGY 1 cut(s) 1330
NspV TTCGAA 1 cut(s) 375
PagI TCATGA 1 cut(s) 1741
PceI AGGCCT 1 cut(s) 1122
PciI ACATGT 1 cut(s) 1326
PctI GAATGC 1 cut(s) 824
PdmI GAANNNNTTC 1 cut(s) 1638
PfeI GAWTC 6 cut(s) 62, 544, 660, 977, 1627, 1933
PinAI ACCGGT 1 cut(s) 1974
PkrI GCNGC 6 cut(s) 240, 329, 332, 1162, 1723, 1732
PleI GAGTC 3 cut(s) 63, 218, 1619
PpsI GAGTC 3 cut(s) 63, 218, 1619
Ppu21I YACGTR 2 cut(s) 163, 866
PscI ACATGT 1 cut(s) 1326
PshAI GACNNNNGTC 1 cut(s) 8
Psp124BI GAGCTC 1 cut(s) 523
Psp1406I AACGTT 1 cut(s) 1958
Psp6I CCWGG 1 cut(s) 1122
PspFI CCCAGC 1 cut(s) 255
PspGI CCWGG 1 cut(s) 1122
PspN4I GGNNCC 8 cut(s) 172, 272, 450, 653, 714, 1291, 1489, 1635
PspPI GGNCC 2 cut(s) 170, 652
PstI CTGCAG 2 cut(s) 332, 1165
PstNI CAGNNNCTG 1 cut(s) 336
PsuI RGATCY 2 cut(s) 875, 1141
RsaI GTAC 5 cut(s) 776, 792, 868, 1510, 1518
RsaNI GTAC 5 cut(s) 775, 791, 867, 1509, 1517
RseI CAYNNNNRTG 1 cut(s) 2113
SacI GAGCTC 1 cut(s) 523
SacII CCGCGG 1 cut(s) 658
SaqAI TTAA 7 cut(s) 458, 599, 1103, 1128, 1176, 1851, 1979
SatI GCNGC 6 cut(s) 239, 328, 331, 1161, 1722, 1731
Sau3AI GATC 6 cut(s) 565, 729, 782, 875, 1141, 1690
Sau96I GGNCC 2 cut(s) 170, 652
ScaI AGTACT 1 cut(s) 1510
SchI GAGTC 3 cut(s) 63, 218, 1620
ScrFI CCNGG 1 cut(s) 1124
SduI GDGCHC 6 cut(s) 201, 523, 670, 1609, 1846, 2018
SfaNI GCATC 3 cut(s) 735, 1888, 1915
SfcI CTRYAG 3 cut(s) 328, 1161, 1548
Sfr303I CCGCGG 1 cut(s) 658
SfuI TTCGAA 1 cut(s) 375
SgrBI CCGCGG 1 cut(s) 658
SinI GGWCC 2 cut(s) 170, 652
SmiMI CAYNNNNRTG 1 cut(s) 2113
SmlI CTYRAG 2 cut(s) 819, 1850
SmoI CTYRAG 2 cut(s) 819, 1850
SnaBI TACGTA 1 cut(s) 866
SpeI ACTAGT 1 cut(s) 1780
SseBI AGGCCT 1 cut(s) 1122
SspI AATATT 1 cut(s) 1669
SspMI CTAG 6 cut(s) 926, 987, 1347, 1481, 1781, 1916
SstI GAGCTC 1 cut(s) 523
StuI AGGCCT 1 cut(s) 1122
StyD4I CCNGG 1 cut(s) 1122
StyI CCWWGG 2 cut(s) 733, 1701
TaiI ACGT 5 cut(s) 165, 868, 1534, 1795, 1961
TaqI TCGA 5 cut(s) 213, 375, 555, 1203, 1284
TatI WGTACW 3 cut(s) 774, 1508, 1516
TauI GCSGC 1 cut(s) 241
TfiI GAWTC 6 cut(s) 62, 544, 660, 977, 1627, 1933
Tru1I TTAA 7 cut(s) 458, 599, 1103, 1128, 1176, 1851, 1979
Tru9I TTAA 7 cut(s) 458, 599, 1103, 1128, 1176, 1851, 1979
TscAI CASTG 4 cut(s) 946, 1170, 1851, 1894
TseFI GTSAC 3 cut(s) 10, 190, 841
TseI GCWGC 5 cut(s) 327, 330, 1160, 1721, 1730
Tsp45I GTSAC 3 cut(s) 10, 190, 841
TspDTI ATGAA 9 cut(s) 497, 817, 990, 1221, 1275, 1738, 1758, 1958, 2073
TspRI CASTG 4 cut(s) 946, 1170, 1851, 1894
Vha464I CTTAAG 1 cut(s) 1850
VpaK11BI GGWCC 2 cut(s) 170, 652
XapI RAATTY 4 cut(s) 525, 1431, 1745, 1855
XceI RCATGY 1 cut(s) 1330
XcmI CCANNNNNNNNNTGG 1 cut(s) 1891
XmnI GAANNNNTTC 1 cut(s) 1638
XspI CTAG 6 cut(s) 926, 987, 1347, 1481, 1781, 1916
ZrmI AGTACT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.