Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0013456

Physical Location & Seq

Genomic Coordinates Forward (+)

4150984 .. 4155818

Gene Structure 4835 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00281960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGACCTCCCTCACGCTCTCTCTTCCCCCCACTCCCGCCCCCACGCGCCTCCGCACAATCAAGCCTCGACTCGCCTCCCTCTACCAACCTCTCCGCCAATCCTATTTCTTCCCGCGCTTCTCACTCCACCGCCTCCCTAACCTCACCGCCGCCTCCGCCTACGTGTCCGGACCCGGCTCCGACCCGATTGTGACAGAGCCCGACCCGAAATTCGACGAGCCGGAGTCAAAAGTCCAGCCGCCGAGTGTGATTAGCTGGGGGCTACTCTGGAGCCTTCTGCTCAAGCACAAGCTCAGACTGGCAATTTCCGCTTTTGCCCTCGTCGGCTGCAGCGCTTGCACTCTCTCAATGCCGATATTTTCAGGACGGTTTTTCGAAGTTCTGATAGGGAAGAGAACAGAGCCATTGTGGAAATTGCTAAGTAAAGTCGGAGTTTTGTATGCTTTGGAGCCGATTTTAACTGTTGTTTTCGTTGTTAATATGAATACTGTATGGGAAAAGGTCATGTCCGCGCTTAGAGCTCAGATTTTCGGCAGGGTTTTGATTCAGAAGGCCGAGTTTTTTGACCGTTACAAGGTTGGTGAATTAACGGGATTGTTAACGTCTGATTTGGGTTCTCTTAAAAATGTTGTTACTGGAACATTGTGCATACTCTTTGTTTTGGCTCCCCAGCTTGCACCAATCCTTGGCCTTCTGATGCTGACCGTGTCTGTTTTAGTTGCTTTGTACAAGAGATCAACTGTGCCTGTTTTCAAGGCGCATGGAATGGCTCAAGCATTCATATCTGATTGTGTGACGGAAACTTTTTCTGCCATACGTACTGTAAGATCCTTTGGTGGGGAAAAGCGCCAAATGCTAATGTTTGGTAAACAGGTGCTTGCTTACCAGAGCAGTGGCATAAAGCTTGGGGTTTTCAAATCCATTAACGAATCGTTGACTAGAGTTGTTGTGTATATATCTCTATTGGCCTTATATTCTCTTGGAGGAAGCAAAGTGAAGGCGGGTGAACTCTCTGTTGGAACTGTGGCTTCTTTCATTGGTTATACTTTCACATTAACATTCGCCGTTCAAGGCCTGGTTAACACATTTGGAGATCTTCGTGGAACTTTTGCTGCAGTGGAGAGGATTAACTCTGTTTTATCTGGGGTAGAAATTGATGAAGCCCTTGCTTATGGCTTAGAAAGGGAAATGCAACAAAAGAAAGTACTTGATGAAGATTACAGATTGTTTCTCATTGATGGTTCCAATGAGAAAAACCAGTCAGTAAATACGCATTACATGTCAGCTCTGAAATCAGCCAGCAATGTTGGACACTTAGCTTGGTCTGGCGATGTTTGTCTCGAAGATGTTCATTTCTCTTATCCTTTGAGACCTGATGTAGAAATTCTGAATGGTCTAAATCTAACGCTAAAGTGTGGAACTGTAACTGCTCTAGTTGGTTCAAGCGGTGCTGGAAAAAGTACTGTTGTACAGCTATTGGCACGTTTCTATGAGCCAACTAGAGGTCGTATAACAGTTGGAGGAGAGGATGTTAGAACATTTGACAAGAGTGAATGGGCACGAGTTGTTTCTATAGTGAACCAAGAACCCGTTCTTTTTTCGGTATCAGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATCATGTATCCAAAGATGATGTAATAAAGGCTGCAAAAGCTGCAAATGCTCATGAATTCATAATTTCACTTCCACAGGGTTATGACACGCTAGTTGGTGAACGTGGAGGTCTACTTAGTGGAGGCCAGAGACAGAGAATCGCAATTGCAAGAGCTCTGCTTAAGAATTCCCCAATCCTTATACTTGATGAGGCCACCAGTGCATTGGATGCAGTTAGTGAGCGCCTAGTCCAGGATGCATTGAATCATCTGATGAAACAGCGGACAACGTTGGTGATTGCTCACCGGTTAAGCACGGTTCAAAATGCCCATCAAATTGCATTGTGTTCCGAGGGGAAGATAGCTGAACTAGGGACGCACTCCGAACTATTGGCCAAGAAAGGTCAATATGCTTCATTGGTTGGCACTCAGAGACTTGCATTCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko02010 map02010

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

689

Amino Acids

75.12

Weight (kDa)

9.11

Isoelectric Point (pI)

30.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	101 - 355	9.5e-30	ABC transporter transmembrane region
ABC_tran	PF00005	463 - 614	9.3e-33	ABC transporter
SMC_N	PF02463	567 - 653	1.1e-06	RecF/RecN/SMC N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25450 AT4G25450
fragaria_vesca	FvH4_7g28920
malus_domestica	MD07G1262600.v1.1
prunus_persica	Prupe.2G289200_v2.0.a1 Prupe.2G289200_v2.0.a1
pyrus_communis	pycom07g24170
rosa_chinensis	RchiOBHm_Chr1g0376591
rosa_laevigata	RLG00000026595
rosa_multiflora	Rmu_sc0001308.1_g000002 Rmu_sc0005594.1_g000009
rosa_roxburghii	Rroxscaffold_4G00281960
rosa_rugosa	Rorug01G0396600
rosa_samantha	Rh1AG413200 Rh1BG372900 Rh1CG386800 Rh1DG403800
rosa_wichuraiana	Rw1G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	686
AccI	GTMKAC	1 cut(s)	1753
AccII	CGCG	3 cut(s)	46, 115, 512
AccIII	TCCGGA	1 cut(s)	167
AclI	AACGTT	1 cut(s)	1910
AclWI	GGATC	1 cut(s)	822
AcoI	YGGCCR	1 cut(s)	2013
AcsI	RAATTY	4 cut(s)	209, 1383, 1697, 1807
AfaI	GTAC	5 cut(s)	728, 820, 1206, 1462, 1470
AfeI	AGCGCT	1 cut(s)	334
AfiI	CCNNNNNNNGG	5 cut(s)	574, 686, 837, 1502, 1873
AflII	CTTAAG	1 cut(s)	1802
AflIII	ACRYGT	2 cut(s)	162, 1278
AgeI	ACCGGT	1 cut(s)	1926
AgsI	TTSAA	6 cut(s)	754, 916, 1070, 1443, 1885, 1943
AjnI	CCWGG	2 cut(s)	1074, 1872
AjuI	GAANNNNNNNTTGG	4 cut(s)	999, 1031, 1575, 1607
Alw21I	GWGCWC	2 cut(s)	523, 1798
Alw26I	GTCTC	4 cut(s)	1343, 1363, 1765, 2047
AlwI	GGATC	1 cut(s)	822
Aor13HI	TCCGGA	1 cut(s)	167
Aor51HI	AGCGCT	1 cut(s)	334
AoxI	GGCC	7 cut(s)	552, 688, 966, 1072, 1765, 1833, 2013
ApeKI	GCWGC	5 cut(s)	327, 330, 1112, 1673, 1682
ApoI	RAATTY	4 cut(s)	209, 1383, 1697, 1807
ArsI	GACNNNNNNTTYG	2 cut(s)	194, 226
AsiGI	ACCGGT	1 cut(s)	1926
Asp700I	GAANNNNTTC	2 cut(s)	1347, 1590
AspLEI	GCGC	7 cut(s)	48, 117, 335, 514, 760, 849, 1866
AspS9I	GGNCC	1 cut(s)	170
AsuC2I	CCSGG	1 cut(s)	174
AsuHPI	GGTGA	6 cut(s)	136, 593, 1016, 1751, 1916, 1927
AsuII	TTCGAA	1 cut(s)	375
AvaII	GGWCC	1 cut(s)	170
BaeGI	GKGCMC	1 cut(s)	1561
BalI	TGGCCA	1 cut(s)	2015
BanII	GRGCYC	3 cut(s)	201, 523, 1798
BauI	CACGAG	1 cut(s)	1560
Bbv12I	GWGCWC	2 cut(s)	523, 1798
BbvI	GCAGC	5 cut(s)	314, 342, 1099, 1660, 1669
BccI	CCATC	2 cut(s)	1232, 1959
BceAI	ACGGC	1 cut(s)	1049
BciT130I	CCWGG	2 cut(s)	1076, 1874
BciVI	GTATCC	1 cut(s)	1660
BclI	TGATCA	1 cut(s)	1642
BcnI	CCSGG	1 cut(s)	174
BcoDI	GTCTC	4 cut(s)	1343, 1363, 1765, 2047
BfaI	CTAG	6 cut(s)	939, 1433, 1500, 1733, 1868, 1991
BfmI	CTRYAG	3 cut(s)	328, 1113, 1572
BfoI	RGCGCY	3 cut(s)	336, 850, 1867
BfrI	CTTAAG	1 cut(s)	1802
BfuI	GTATCC	1 cut(s)	1660
BglII	AGATCT	1 cut(s)	1093
BisI	GCNGC	7 cut(s)	150, 239, 328, 331, 1113, 1674, 1683
BlsI	GCNGC	7 cut(s)	151, 240, 329, 332, 1114, 1675, 1684
BmcAI	AGTACT	2 cut(s)	1206, 1462
Bme1390I	CCNGG	3 cut(s)	174, 1076, 1874
Bme18I	GGWCC	1 cut(s)	170
BmgT120I	GGNCC	1 cut(s)	170
BmiI	GGNNCC	6 cut(s)	172, 178, 272, 450, 666, 1243
BmrFI	CCNGG	3 cut(s)	174, 1076, 1874
BmsI	GCATC	3 cut(s)	687, 1840, 1867
BpmI	CTGGAG	1 cut(s)	289
Bpu14I	TTCGAA	1 cut(s)	375
BpuEI	CTTGAG	2 cut(s)	266, 756
BpuMI	CCSGG	1 cut(s)	174
BsaAI	YACGTR	2 cut(s)	163, 818
BsaI	GGTCTC	1 cut(s)	1363
BsaJI	CCNNGG	2 cut(s)	685, 1971
BsaWI	WCCGGW	2 cut(s)	167, 1926
BsaXI	ACNNNNNCTCC	2 cut(s)	1515, 1545
Bsc4I	CCNNNNNNNGG	5 cut(s)	574, 686, 837, 1502, 1873
Bse118I	RCCGGY	1 cut(s)	1926
Bse1I	ACTGG	4 cut(s)	303, 640, 1258, 1839
Bse3DI	GCAATG	1 cut(s)	1309
BseAI	TCCGGA	1 cut(s)	167
BseBI	CCWGG	2 cut(s)	1076, 1874
BseDI	CCNNGG	2 cut(s)	685, 1971
BseGI	GGATG	3 cut(s)	1534, 1855, 1882
BseLI	CCNNNNNNNGG	5 cut(s)	574, 686, 837, 1502, 1873
BseMI	GCAATG	1 cut(s)	1309
BseMII	CTCAG	3 cut(s)	307, 536, 2063
BseNI	ACTGG	4 cut(s)	303, 640, 1258, 1839
BseRI	GAGGAG	1 cut(s)	1536
BseSI	GKGCMC	1 cut(s)	1561
BseXI	GCAGC	5 cut(s)	314, 342, 1099, 1660, 1669
BseYI	CCCAGC	2 cut(s)	255, 669
Bsh1236I	CGCG	3 cut(s)	46, 115, 512
BshFI	GGCC	7 cut(s)	554, 690, 968, 1074, 1767, 1835, 2015
BshTI	ACCGGT	1 cut(s)	1926
BsiHKAI	GWGCWC	2 cut(s)	523, 1798
BsiSI	CCGG	4 cut(s)	168, 174, 221, 1927
BslFI	GGGAC	1 cut(s)	2008
BslI	CCNNNNNNNGG	5 cut(s)	574, 686, 837, 1502, 1873
BsmAI	GTCTC	4 cut(s)	1343, 1363, 1765, 2047
BsmFI	GGGAC	1 cut(s)	2008
BsmI	GAATGC	2 cut(s)	776, 2060
BsnI	GGCC	7 cut(s)	554, 690, 968, 1074, 1767, 1835, 2015
Bso31I	GGTCTC	1 cut(s)	1363
Bsp119I	TTCGAA	1 cut(s)	375
Bsp1286I	GDGCHC	4 cut(s)	201, 523, 1561, 1798
Bsp13I	TCCGGA	1 cut(s)	167
Bsp1407I	TGTACA	2 cut(s)	726, 1468
Bsp143I	GATC	4 cut(s)	734, 827, 1093, 1642
BspANI	GGCC	7 cut(s)	554, 690, 968, 1074, 1767, 1835, 2015
BspCNI	CTCAG	3 cut(s)	306, 535, 2062
BspEI	TCCGGA	1 cut(s)	167
BspFNI	CGCG	3 cut(s)	46, 115, 512
BspHI	TCATGA	1 cut(s)	1693
BspLI	GGNNCC	6 cut(s)	172, 178, 272, 450, 666, 1243
BspMAI	CTGCAG	2 cut(s)	332, 1117
BspPI	GGATC	1 cut(s)	822
BspT104I	TTCGAA	1 cut(s)	375
BspTI	CTTAAG	1 cut(s)	1802
BspTNI	GGTCTC	1 cut(s)	1363
BsrDI	GCAATG	1 cut(s)	1309
BsrFI	RCCGGY	1 cut(s)	1926
BsrGI	TGTACA	2 cut(s)	726, 1468
BsrI	ACTGG	4 cut(s)	303, 640, 1258, 1839
BssAI	RCCGGY	1 cut(s)	1926
BssECI	CCNNGG	2 cut(s)	685, 1971
BssMI	GATC	4 cut(s)	734, 827, 1093, 1642
BssSI	CACGAG	1 cut(s)	1560
BssT1I	CCWWGG	1 cut(s)	685
Bst2BI	CACGAG	1 cut(s)	1560
Bst2UI	CCWGG	2 cut(s)	1076, 1874
Bst6I	CTCTTC	2 cut(s)	27, 386
BstAFI	CTTAAG	1 cut(s)	1802
BstAPI	GCANNNNNTGC	3 cut(s)	336, 1682, 1850
BstAUI	TGTACA	2 cut(s)	726, 1468
BstBAI	YACGTR	2 cut(s)	163, 818
BstBI	TTCGAA	1 cut(s)	375
BstC8I	GCNNGC	4 cut(s)	337, 675, 879, 1300
BstDEI	CTNAG	8 cut(s)	293, 419, 515, 522, 1177, 1315, 1757, 2049
BstENI	CCTNNNNNAGG	1 cut(s)	1871
BstF5I	GGATG	3 cut(s)	1534, 1855, 1882
BstFNI	CGCG	3 cut(s)	46, 115, 512
BstH2I	RGCGCY	3 cut(s)	336, 850, 1867
BstHHI	GCGC	7 cut(s)	48, 117, 335, 514, 760, 849, 1866
BstKTI	GATC	4 cut(s)	737, 830, 1096, 1645
BstMAI	GTCTC	4 cut(s)	1343, 1363, 1765, 2047
BstMBI	GATC	4 cut(s)	734, 827, 1093, 1642
BstNI	CCWGG	2 cut(s)	1076, 1874
BstNSI	RCATGY	1 cut(s)	1282
BstSCI	CCNGG	3 cut(s)	172, 1074, 1872
BstSFI	CTRYAG	3 cut(s)	328, 1113, 1572
BstSLI	GKGCMC	1 cut(s)	1561
BstSNI	TACGTA	1 cut(s)	818
BstUI	CGCG	3 cut(s)	46, 115, 512
BstV1I	GCAGC	5 cut(s)	314, 342, 1099, 1660, 1669
BstX2I	RGATCY	2 cut(s)	827, 1093
BstXI	CCANNNNNNTGG	2 cut(s)	893, 1846
BstYI	RGATCY	2 cut(s)	827, 1093
BsuI	GTATCC	1 cut(s)	1660
BsuRI	GGCC	7 cut(s)	554, 690, 968, 1074, 1767, 1835, 2015
BtgZI	GCGATG	1 cut(s)	1344
BtsCI	GGATG	3 cut(s)	1534, 1855, 1882
BtsI	GCAGTG	2 cut(s)	898, 1122
BtsIMutI	CAGTG	3 cut(s)	898, 1122, 1846
Cac8I	GCNNGC	4 cut(s)	337, 675, 879, 1300
CciI	TCATGA	1 cut(s)	1693
CfoI	GCGC	7 cut(s)	48, 117, 335, 514, 760, 849, 1866
Cfr10I	RCCGGY	1 cut(s)	1926
Cfr13I	GGNCC	1 cut(s)	170
CseI	GACGC	1 cut(s)	2005
Csp6I	GTAC	5 cut(s)	727, 819, 1205, 1461, 1469
CspAI	ACCGGT	1 cut(s)	1926
CviAII	CATG	5 cut(s)	505, 761, 1279, 1646, 1694
CviQI	GTAC	5 cut(s)	727, 819, 1205, 1461, 1469
DdeI	CTNAG	8 cut(s)	293, 419, 515, 522, 1177, 1315, 1757, 2049
DpnI	GATC	4 cut(s)	736, 829, 1095, 1644
DpnII	GATC	4 cut(s)	734, 827, 1093, 1642
EaeI	YGGCCR	1 cut(s)	2013
Eam1104I	CTCTTC	2 cut(s)	27, 386
EarI	CTCTTC	2 cut(s)	27, 386
EciI	GGCGGA	2 cut(s)	83, 145
Ecl136II	GAGCTC	2 cut(s)	521, 1796
Eco105I	TACGTA	1 cut(s)	818
Eco130I	CCWWGG	1 cut(s)	685
Eco147I	AGGCCT	1 cut(s)	1074
Eco24I	GRGCYC	3 cut(s)	201, 523, 1798
Eco31I	GGTCTC	1 cut(s)	1363
Eco47I	GGWCC	1 cut(s)	170
Eco47III	AGCGCT	1 cut(s)	334
Eco53kI	GAGCTC	2 cut(s)	521, 1796
EcoICRI	GAGCTC	2 cut(s)	521, 1796
EcoNI	CCTNNNNNAGG	1 cut(s)	1871
EcoRI	GAATTC	2 cut(s)	1697, 1807
EcoRII	CCWGG	2 cut(s)	1074, 1872
EcoT14I	CCWWGG	1 cut(s)	685
EcoT22I	ATGCAT	1 cut(s)	1882
EcoT38I	GRGCYC	3 cut(s)	201, 523, 1798
ErhI	CCWWGG	1 cut(s)	685
FaeI	CATG	5 cut(s)	508, 764, 1282, 1649, 1697
FaqI	GGGAC	1 cut(s)	2008
FatI	CATG	5 cut(s)	504, 760, 1278, 1645, 1693
FauI	CCCGC	3 cut(s)	43, 120, 994
FauNDI	CATATG	1 cut(s)	1627
FbaI	TGATCA	1 cut(s)	1642
FblI	GTMKAC	1 cut(s)	1753
Fnu4HI	GCNGC	7 cut(s)	150, 239, 328, 331, 1113, 1674, 1683
FokI	GGATG	3 cut(s)	1541, 1862, 1889
FriOI	GRGCYC	3 cut(s)	201, 523, 1798
Fsp4HI	GCNGC	7 cut(s)	150, 239, 328, 331, 1113, 1674, 1683
FspBI	CTAG	6 cut(s)	939, 1433, 1500, 1733, 1868, 1991
GlaI	GCGC	7 cut(s)	47, 116, 334, 513, 759, 848, 1865
GluI	GCNGC	7 cut(s)	150, 239, 328, 331, 1113, 1674, 1683
GsaI	CCCAGC	2 cut(s)	259, 673
GsuI	CTGGAG	1 cut(s)	289
HaeII	RGCGCY	3 cut(s)	336, 850, 1867
HaeIII	GGCC	7 cut(s)	554, 690, 968, 1074, 1767, 1835, 2015
HapII	CCGG	4 cut(s)	168, 174, 221, 1927
HgaI	GACGC	1 cut(s)	2005
HhaI	GCGC	7 cut(s)	48, 117, 335, 514, 760, 849, 1866
Hin1II	CATG	5 cut(s)	508, 764, 1282, 1649, 1697
Hin6I	GCGC	7 cut(s)	46, 115, 333, 512, 758, 847, 1864
HinP1I	GCGC	7 cut(s)	46, 115, 333, 512, 758, 847, 1864
HincII	GTYRAC	3 cut(s)	600, 936, 1081
HindII	GTYRAC	3 cut(s)	600, 936, 1081
HindIII	AAGCTT	1 cut(s)	902
HinfI	GANTC	6 cut(s)	69, 224, 544, 929, 1779, 1885
HpaI	GTTAAC	2 cut(s)	600, 1081
HpaII	CCGG	4 cut(s)	168, 174, 221, 1927
HphI	GGTGA	6 cut(s)	136, 593, 1016, 1751, 1916, 1927
Hpy166II	GTNNAC	8 cut(s)	600, 869, 936, 1007, 1081, 1579, 1742, 1754
Hpy188III	TCNNGA	6 cut(s)	168, 268, 363, 1340, 1637, 1694
Hpy8I	GTNNAC	8 cut(s)	600, 869, 936, 1007, 1081, 1579, 1742, 1754
Hpy99I	CGWCG	2 cut(s)	218, 326
HpyAV	CCTTC	4 cut(s)	284, 544, 701, 991
HpyCH4IV	ACGT	6 cut(s)	162, 602, 817, 1483, 1744, 1910
HpyF3I	CTNAG	8 cut(s)	293, 419, 515, 522, 1177, 1315, 1757, 2049
HpySE526I	ACGT	6 cut(s)	162, 602, 817, 1483, 1744, 1910
Hsp92II	CATG	5 cut(s)	508, 764, 1282, 1649, 1697
HspAI	GCGC	7 cut(s)	46, 115, 333, 512, 758, 847, 1864
Kpn2I	TCCGGA	1 cut(s)	167
Ksp22I	TGATCA	1 cut(s)	1642
KspAI	GTTAAC	2 cut(s)	600, 1081
Kzo9I	GATC	4 cut(s)	734, 827, 1093, 1642
LmnI	GCTCC	4 cut(s)	182, 270, 448, 670
Lsp1109I	GCAGC	5 cut(s)	314, 342, 1099, 1660, 1669
LweI	GCATC	3 cut(s)	687, 1840, 1867
MaeI	CTAG	6 cut(s)	939, 1433, 1500, 1733, 1868, 1991
MaeII	ACGT	6 cut(s)	162, 602, 817, 1483, 1744, 1910
MaeIII	GTNAC	5 cut(s)	190, 569, 631, 793, 1423
MalI	GATC	4 cut(s)	736, 829, 1095, 1644
MboI	GATC	4 cut(s)	734, 827, 1093, 1642
MboII	GAAGA	7 cut(s)	14, 100, 403, 1088, 1226, 1355, 1990
MfeI	CAATTG	1 cut(s)	1785
MflI	RGATCY	2 cut(s)	827, 1093
MhlI	GDGCHC	4 cut(s)	201, 523, 1561, 1798
MlsI	TGGCCA	1 cut(s)	2015
MluNI	TGGCCA	1 cut(s)	2015
MlyI	GAGTC	2 cut(s)	63, 233
MmeI	TCCRAC	6 cut(s)	204, 409, 997, 1288, 1498, 1591
Mox20I	TGGCCA	1 cut(s)	2015
Mph1103I	ATGCAT	1 cut(s)	1882
MroI	TCCGGA	1 cut(s)	167
MroXI	GAANNNNTTC	2 cut(s)	1347, 1590
MscI	TGGCCA	1 cut(s)	2015
MslI	CAYNNNNRTG	1 cut(s)	2065
Msp20I	TGGCCA	1 cut(s)	2015
MspA1I	CMGCKG	1 cut(s)	1903
MspCI	CTTAAG	1 cut(s)	1802
MspI	CCGG	4 cut(s)	168, 174, 221, 1927
MspR9I	CCNGG	3 cut(s)	174, 1076, 1874
MunI	CAATTG	1 cut(s)	1785
Mva1269I	GAATGC	2 cut(s)	776, 2060
MvaI	CCWGG	2 cut(s)	1076, 1874
MvnI	CGCG	3 cut(s)	46, 115, 512
NciI	CCSGG	1 cut(s)	174
NdeI	CATATG	1 cut(s)	1627
NdeII	GATC	4 cut(s)	734, 827, 1093, 1642
NlaIII	CATG	5 cut(s)	508, 764, 1282, 1649, 1697
NlaIV	GGNNCC	6 cut(s)	172, 178, 272, 450, 666, 1243
NmeAIII	GCCGAG	2 cut(s)	267, 580
NmuCI	GTSAC	2 cut(s)	190, 793
NsiI	ATGCAT	1 cut(s)	1882
NspI	RCATGY	1 cut(s)	1282
NspV	TTCGAA	1 cut(s)	375
PagI	TCATGA	1 cut(s)	1693
PceI	AGGCCT	1 cut(s)	1074
PciI	ACATGT	1 cut(s)	1278
PctI	GAATGC	2 cut(s)	776, 2060
PdmI	GAANNNNTTC	2 cut(s)	1347, 1590
PfeI	GAWTC	4 cut(s)	544, 929, 1779, 1885
PflFI	GACNNNGTC	1 cut(s)	706
PflMI	CCANNNNNTGG	1 cut(s)	686
PfoI	TCCNGGA	1 cut(s)	1872
PinAI	ACCGGT	1 cut(s)	1926
PkrI	GCNGC	7 cut(s)	151, 240, 329, 332, 1114, 1675, 1684
PleI	GAGTC	2 cut(s)	63, 232
PpsI	GAGTC	2 cut(s)	63, 232
Ppu21I	YACGTR	2 cut(s)	163, 818
PscI	ACATGT	1 cut(s)	1278
Psp124BI	GAGCTC	2 cut(s)	523, 1798
Psp1406I	AACGTT	1 cut(s)	1910
Psp6I	CCWGG	2 cut(s)	1074, 1872
PspFI	CCCAGC	2 cut(s)	255, 669
PspGI	CCWGG	2 cut(s)	1074, 1872
PspN4I	GGNNCC	6 cut(s)	172, 178, 272, 450, 666, 1243
PspPI	GGNCC	1 cut(s)	170
PstI	CTGCAG	2 cut(s)	332, 1117
PsuI	RGATCY	2 cut(s)	827, 1093
PsyI	GACNNNGTC	1 cut(s)	706
RsaI	GTAC	5 cut(s)	728, 820, 1206, 1462, 1470
RsaNI	GTAC	5 cut(s)	727, 819, 1205, 1461, 1469
RseI	CAYNNNNRTG	1 cut(s)	2065
SacI	GAGCTC	2 cut(s)	523, 1798
SatI	GCNGC	7 cut(s)	150, 239, 328, 331, 1113, 1674, 1683
Sau3AI	GATC	4 cut(s)	734, 827, 1093, 1642
Sau96I	GGNCC	1 cut(s)	170
ScaI	AGTACT	2 cut(s)	1206, 1462
SchI	GAGTC	2 cut(s)	63, 233
ScrFI	CCNGG	3 cut(s)	174, 1076, 1874
SduI	GDGCHC	4 cut(s)	201, 523, 1561, 1798
SfaNI	GCATC	3 cut(s)	687, 1840, 1867
SfcI	CTRYAG	3 cut(s)	328, 1113, 1572
SfuI	TTCGAA	1 cut(s)	375
SinI	GGWCC	1 cut(s)	170
SmiMI	CAYNNNNRTG	1 cut(s)	2065
SmlI	CTYRAG	3 cut(s)	281, 771, 1802
SmoI	CTYRAG	3 cut(s)	281, 771, 1802
SnaBI	TACGTA	1 cut(s)	818
SseBI	AGGCCT	1 cut(s)	1074
SspI	AATATT	1 cut(s)	1621
SspMI	CTAG	6 cut(s)	939, 1433, 1500, 1733, 1868, 1991
SstI	GAGCTC	2 cut(s)	523, 1798
StuI	AGGCCT	1 cut(s)	1074
StyD4I	CCNGG	3 cut(s)	172, 1074, 1872
StyI	CCWWGG	1 cut(s)	685
TaiI	ACGT	6 cut(s)	165, 605, 820, 1486, 1747, 1913
TaqI	TCGA	5 cut(s)	67, 213, 375, 1341, 2064
TatI	WGTACW	4 cut(s)	726, 1204, 1460, 1468
TauI	GCSGC	2 cut(s)	152, 241
TfiI	GAWTC	4 cut(s)	544, 929, 1779, 1885
TscAI	CASTG	3 cut(s)	898, 1122, 1846
TseFI	GTSAC	2 cut(s)	190, 793
TseI	GCWGC	5 cut(s)	327, 330, 1112, 1673, 1682
Tsp45I	GTSAC	2 cut(s)	190, 793
TspGWI	ACGGA	1 cut(s)	812
TspRI	CASTG	3 cut(s)	898, 1122, 1846
Tth111I	GACNNNGTC	1 cut(s)	706
Van91I	CCANNNNNTGG	1 cut(s)	686
Vha464I	CTTAAG	1 cut(s)	1802
VpaK11BI	GGWCC	1 cut(s)	170
XagI	CCTNNNNNAGG	1 cut(s)	1871
XapI	RAATTY	4 cut(s)	209, 1383, 1697, 1807
XceI	RCATGY	1 cut(s)	1282
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1843
XmiI	GTMKAC	1 cut(s)	1753
XmnI	GAANNNNTTC	2 cut(s)	1347, 1590
XspI	CTAG	6 cut(s)	939, 1433, 1500, 1733, 1868, 1991
ZrmI	AGTACT	2 cut(s)	1206, 1462
Zsp2I	ATGCAT	1 cut(s)	1882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.