MD00G1130400.v1.1

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0028749
Physical Location & Seq
Reverse (-)
28070076 .. 28071170
1095 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1130400.v1.1.491

Sequence Viewer

Length: 621 bp
ATGCTCATCCTAGTATACCTTCTTGTTTATATTGGCACATCAGGGTATTATCGTCTTCATTTTGTAACGCTTTTGAAGTTATTATGTCCGTTTTCTCCCCTTAGCTATGAAGTACAGTGTTACAACAATCGAGCCAATATTTGGTTCAGCAATGCCATTGGCCCACCATGCACTTTATTACGCTGTTTTGGTTCGAATTACAACCATTGCCTGAATAAGAGCGAAAGTATGAGCATGTGCAGAGAGGCGCAGAGCATGTTGAATTTTTCGAATGAAGCTCGGTTCTTATTGATATCCGAGGAAAGCGTATCTGACCTCAACCAGAGAGAAAGCACAAAGGTACAAAGGGGTGCTCGTGGAGCAGCAGGTCAAATCAATCCAATGAGATTTGGGCCCAACCTCGTCTTATCTGGGGGTGAACCATATGAAGACGGATGGGGAAGTCTAAAAATTGGGAATAAATACTTCGCGCCTTTGGGTGGATGTAATCGTTGCCAGACGATCAACATTGTTCATGAAGCTGGACAAGTGCAGAAGTCAAAAGAACCTTTGGCTGCTCTGGCAACGTATAGGAGAGTGAAGGTCATCCGTGATGGTTTTTTGAAAGTGATGTTTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006066 GO:0006082 GO:0006464 GO:0006605 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0008265 GO:0008299 GO:0008610 GO:0009000 GO:0009058 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009743 GO:0009755 GO:0009756 GO:0009987 GO:0010033 GO:0010118 GO:0010182 GO:0015031 GO:0015833 GO:0016053 GO:0016106 GO:0016114 GO:0016740 GO:0016782 GO:0016783 GO:0016829 GO:0016846 GO:0017038 GO:0018315 GO:0019538 GO:0019752 GO:0023052 GO:0032787 GO:0032870 GO:0033036 GO:0033365 GO:0034613 GO:0036211 GO:0042040 GO:0042221 GO:0042742 GO:0042886 GO:0043170 GO:0043207 GO:0043288 GO:0043289 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0045036 GO:0045037 GO:0045184 GO:0046165 GO:0046394 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071322 GO:0071365 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072330 GO:0072594 GO:0072596 GO:0072598 GO:0098542 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645
KEGG Pathways
Metabolic & Signaling
ko00790 map00790
Pfam Domains
Protein Families
Aminotran_5 MOSC MOSC_N

Protein Analysis

207

Amino Acids

23.14

Weight (kDa)

9.15

Isoelectric Point (pI)

30.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOSC PF03473 88 - 194 5.4e-13 MOSC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028749)

Species Orthologous Gene IDs
malus_domestica MD00G1130400.v1.1
pyrus_communis pycom10g17410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 356
AccB7I CCANNNNNTGG 1 cut(s) 141
AccI GTMKAC 1 cut(s) 15
AccII CGCG 1 cut(s) 470
AcsI RAATTY 1 cut(s) 262
AfaI GTAC 2 cut(s) 114, 342
AfiI CCNNNNNNNGG 2 cut(s) 141, 479
AgsI TTSAA 3 cut(s) 76, 262, 604
AjuI GAANNNNNNNTTGG 2 cut(s) 128, 160
AluBI AGCT 3 cut(s) 105, 278, 521
AluI AGCT 3 cut(s) 105, 278, 521
Alw21I GWGCWC 1 cut(s) 355
AoxI GGCC 2 cut(s) 160, 392
ApaI GGGCCC 1 cut(s) 396
ApeKI GCWGC 2 cut(s) 362, 554
ApoI RAATTY 1 cut(s) 262
AspLEI GCGC 2 cut(s) 250, 472
AspS9I GGNCC 3 cut(s) 161, 392, 393
AsuHPI GGTGA 1 cut(s) 428
AsuII TTCGAA 2 cut(s) 194, 269
BaeGI GKGCMC 1 cut(s) 396
BanII GRGCYC 1 cut(s) 396
BauI CACGAG 1 cut(s) 354
BbsI GAAGAC 2 cut(s) 47, 435
Bbv12I GWGCWC 1 cut(s) 355
BbvI GCAGC 2 cut(s) 374, 541
BccI CCATC 2 cut(s) 429, 587
BfaI CTAG 1 cut(s) 11
BfuAI ACCTGC 1 cut(s) 356
BisI GCNGC 2 cut(s) 363, 555
BlsI GCNGC 2 cut(s) 364, 556
BmgT120I GGNCC 3 cut(s) 161, 392, 393
BmiI GGNNCC 1 cut(s) 394
BpiI GAAGAC 2 cut(s) 47, 435
Bpu10I CCTNAGC 1 cut(s) 101
Bpu14I TTCGAA 2 cut(s) 194, 269
BsaJI CCNNGG 1 cut(s) 297
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 479
Bse3DI GCAATG 2 cut(s) 157, 205
BseDI CCNNGG 1 cut(s) 297
BseGI GGATG 4 cut(s) 6, 440, 488, 585
BseLI CCNNNNNNNGG 2 cut(s) 141, 479
BseMI GCAATG 2 cut(s) 157, 205
BseSI GKGCMC 1 cut(s) 396
BseXI GCAGC 2 cut(s) 374, 541
BsgI GTGCAG 2 cut(s) 259, 551
Bsh1236I CGCG 1 cut(s) 470
BshFI GGCC 2 cut(s) 162, 394
BsiHKAI GWGCWC 1 cut(s) 355
BslI CCNNNNNNNGG 2 cut(s) 141, 479
BsnI GGCC 2 cut(s) 162, 394
Bsp119I TTCGAA 2 cut(s) 194, 269
Bsp120I GGGCCC 1 cut(s) 392
Bsp1286I GDGCHC 2 cut(s) 355, 396
Bsp143I GATC 1 cut(s) 501
BspANI GGCC 2 cut(s) 162, 394
BspFNI CGCG 1 cut(s) 470
BspHI TCATGA 1 cut(s) 514
BspLI GGNNCC 1 cut(s) 394
BspMI ACCTGC 1 cut(s) 356
BspT104I TTCGAA 2 cut(s) 194, 269
BsrDI GCAATG 2 cut(s) 157, 205
BssECI CCNNGG 1 cut(s) 297
BssMI GATC 1 cut(s) 501
BssNAI GTATAC 1 cut(s) 16
BssSI CACGAG 1 cut(s) 354
Bst1107I GTATAC 1 cut(s) 16
Bst2BI CACGAG 1 cut(s) 354
Bst4CI ACNGT 1 cut(s) 117
BstBI TTCGAA 2 cut(s) 194, 269
BstDEI CTNAG 1 cut(s) 101
BstF5I GGATG 4 cut(s) 6, 440, 488, 585
BstFNI CGCG 1 cut(s) 470
BstHHI GCGC 2 cut(s) 250, 472
BstKTI GATC 1 cut(s) 504
BstMBI GATC 1 cut(s) 501
BstMWI GCNNNNNNNGC 3 cut(s) 168, 359, 560
BstNSI RCATGY 2 cut(s) 238, 259
BstSLI GKGCMC 1 cut(s) 396
BstUI CGCG 1 cut(s) 470
BstV1I GCAGC 2 cut(s) 374, 541
BstV2I GAAGAC 2 cut(s) 47, 435
BstZ17I GTATAC 1 cut(s) 16
BsuRI GGCC 2 cut(s) 162, 394
BtsCI GGATG 4 cut(s) 6, 440, 488, 585
BtsIMutI CAGTG 1 cut(s) 122
BveI ACCTGC 1 cut(s) 356
CciI TCATGA 1 cut(s) 514
CfoI GCGC 2 cut(s) 250, 472
Cfr13I GGNCC 3 cut(s) 161, 392, 393
Csp6I GTAC 2 cut(s) 113, 341
CviAII CATG 4 cut(s) 168, 235, 256, 515
CviJI RGCY 7 cut(s) 105, 134, 162, 278, 394, 521, 554
CviKI_1 RGCY 7 cut(s) 105, 134, 162, 278, 394, 521, 554
CviQI GTAC 2 cut(s) 113, 341
DdeI CTNAG 1 cut(s) 101
DpnI GATC 1 cut(s) 503
DpnII GATC 1 cut(s) 501
Eco24I GRGCYC 1 cut(s) 396
Eco32I GATATC 1 cut(s) 294
EcoRV GATATC 1 cut(s) 294
EcoT38I GRGCYC 1 cut(s) 396
FaeI CATG 4 cut(s) 171, 238, 259, 518
FatI CATG 4 cut(s) 167, 234, 255, 514
FauNDI CATATG 1 cut(s) 424
FblI GTMKAC 1 cut(s) 15
Fnu4HI GCNGC 2 cut(s) 363, 555
FokI GGATG 3 cut(s) 447, 495, 572
FriOI GRGCYC 1 cut(s) 396
Fsp4HI GCNGC 2 cut(s) 363, 555
FspBI CTAG 1 cut(s) 11
GlaI GCGC 2 cut(s) 249, 471
GluI GCNGC 2 cut(s) 363, 555
HaeIII GGCC 2 cut(s) 162, 394
HhaI GCGC 2 cut(s) 250, 472
Hin1II CATG 4 cut(s) 171, 238, 259, 518
Hin6I GCGC 2 cut(s) 248, 470
HinP1I GCGC 2 cut(s) 248, 470
HphI GGTGA 1 cut(s) 428
Hpy166II GTNNAC 2 cut(s) 16, 419
Hpy188I TCNGA 2 cut(s) 298, 313
Hpy188III TCNNGA 1 cut(s) 515
Hpy8I GTNNAC 2 cut(s) 16, 419
HpyAV CCTTC 2 cut(s) 29, 574
HpyCH4III ACNGT 1 cut(s) 117
HpyCH4IV ACGT 1 cut(s) 566
HpyCH4V TGCA 3 cut(s) 171, 240, 532
HpyF10VI GCNNNNNNNGC 3 cut(s) 168, 359, 560
HpyF3I CTNAG 1 cut(s) 101
HpySE526I ACGT 1 cut(s) 566
Hsp92II CATG 4 cut(s) 171, 238, 259, 518
HspAI GCGC 2 cut(s) 248, 470
Kzo9I GATC 1 cut(s) 501
LmnI GCTCC 1 cut(s) 359
LpnPI CCDG 8 cut(s) 27, 224, 335, 351, 396, 507, 509, 545
Lsp1109I GCAGC 2 cut(s) 374, 541
MaeI CTAG 1 cut(s) 11
MaeII ACGT 1 cut(s) 566
MaeIII GTNAC 2 cut(s) 64, 119
MalI GATC 1 cut(s) 503
MboI GATC 1 cut(s) 501
MboII GAAGA 2 cut(s) 47, 440
MhlI GDGCHC 2 cut(s) 355, 396
MluCI AATT 3 cut(s) 196, 262, 450
MnlI CCTC 4 cut(s) 238, 292, 326, 410
MseI TTAA 1 cut(s) 619
MvnI CGCG 1 cut(s) 470
MwoI GCNNNNNNNGC 3 cut(s) 168, 359, 560
NdeI CATATG 1 cut(s) 424
NdeII GATC 1 cut(s) 501
NlaIII CATG 4 cut(s) 171, 238, 259, 518
NlaIV GGNNCC 1 cut(s) 394
NspI RCATGY 2 cut(s) 238, 259
NspV TTCGAA 2 cut(s) 194, 269
PagI TCATGA 1 cut(s) 514
PflMI CCANNNNNTGG 1 cut(s) 141
PkrI GCNGC 2 cut(s) 364, 556
PspN4I GGNNCC 1 cut(s) 394
PspOMI GGGCCC 1 cut(s) 392
PspPI GGNCC 3 cut(s) 161, 392, 393
RsaI GTAC 2 cut(s) 114, 342
RsaNI GTAC 2 cut(s) 113, 341
SaqAI TTAA 1 cut(s) 619
SatI GCNGC 2 cut(s) 363, 555
Sau3AI GATC 1 cut(s) 501
Sau96I GGNCC 3 cut(s) 161, 392, 393
SduI GDGCHC 2 cut(s) 355, 396
SfuI TTCGAA 2 cut(s) 194, 269
Sse9I AATT 3 cut(s) 196, 262, 450
SspI AATATT 1 cut(s) 139
SspMI CTAG 1 cut(s) 11
TaaI ACNGT 1 cut(s) 117
TaiI ACGT 1 cut(s) 569
TaqI TCGA 3 cut(s) 130, 194, 269
TasI AATT 3 cut(s) 196, 262, 450
TatI WGTACW 1 cut(s) 112
Tru1I TTAA 1 cut(s) 619
Tru9I TTAA 1 cut(s) 619
TscAI CASTG 1 cut(s) 122
TseI GCWGC 2 cut(s) 362, 554
TspDTI ATGAA 6 cut(s) 47, 123, 288, 441, 503, 531
TspGWI ACGGA 3 cut(s) 78, 447, 578
TspRI CASTG 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 141
XapI RAATTY 1 cut(s) 262
XceI RCATGY 2 cut(s) 238, 259
XmiI GTMKAC 1 cut(s) 15
XspI CTAG 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.