pycom10g17410

Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0028749
Physical Location & Seq
Reverse (-)
20624112 .. 20625572
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g17410.1

Sequence Viewer

Length: 837 bp
ATGGACGTTTGTAGAATACATATTTGGAGTGCAGAATGTGATATATATTTATCCTCTGAGTCTCTTTCTATCATTCGGTCTTTTTTTATTTCGGTGGAGGTTTTCCTGGAAGATAAGTATAATAAATTCGTTTTTTGTAGAATCTTTGCTGATCGATCACTCTTTGATTGCTTCTCTGTTAGACAGCTTTTCAGTTATCGTCTTCATTTTGTAACGCTTTTGAAGTTATTATGTCTGTTTTCTCCCCTTAGATATGAAGTACAGTGTTACGACAATGGAGCCAATAATTGGTTCAGCAATGCCATTGGCCGACCATGCACTTTATTACGCTGTTTTAGTTCGAATTACAACCATTGCCTGAATAAGAGCGAAAGTATGAGCATGTGCAGAGAGGCGCAGGACATGTTGAATTTTTCGAATGAAGCTCGGTTCTTATTGATATCCGAGGAAAGCGTATCTGACCTCAACCAGAGAGTAAGCACAAGTATGTTCTTGCGTAGTAATGGAACCTCTTATTGTACAGGTGCTCGTGGAGCAGCAGGTCAAATCAATCCAATGAGATTTCGGCCCAACCTCGTCTTATCTGGGGGCGAACCATATGAAGATGGATGGGGAAATCTAAAAATTGGGAATAAATACTTCTCACCTTTGGGTGGATGTAATCGTTGCCAAATGATCAACATTGTTCATCAAGCTGGACAAGTGCAGAAGTCAAATGAACCTTTGGGAAAGATTCTCTTTGGGATTCTTCTGAAATACGAAAGAAGTGAAGTCGTAGGTAGGGACGATGATTTGTGGCTTCAAGTGGGACAAGATGTACATCCGAATATCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006066 GO:0006082 GO:0006464 GO:0006605 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006807 GO:0006810 GO:0006886 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0008104 GO:0008150 GO:0008152 GO:0008265 GO:0008299 GO:0008610 GO:0009000 GO:0009058 GO:0009266 GO:0009408 GO:0009409 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009687 GO:0009688 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009743 GO:0009755 GO:0009756 GO:0009987 GO:0010033 GO:0010118 GO:0010182 GO:0015031 GO:0015833 GO:0016053 GO:0016106 GO:0016114 GO:0016740 GO:0016782 GO:0016783 GO:0016829 GO:0016846 GO:0017038 GO:0018315 GO:0019538 GO:0019752 GO:0023052 GO:0032787 GO:0032870 GO:0033036 GO:0033365 GO:0034613 GO:0036211 GO:0042040 GO:0042221 GO:0042742 GO:0042886 GO:0043170 GO:0043207 GO:0043288 GO:0043289 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0045036 GO:0045037 GO:0045184 GO:0046165 GO:0046394 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0055085 GO:0065002 GO:0065007 GO:0070727 GO:0070887 GO:0071310 GO:0071322 GO:0071365 GO:0071495 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0072330 GO:0072594 GO:0072596 GO:0072598 GO:0098542 GO:1901564 GO:1901576 GO:1901615 GO:1901617 GO:1901700 GO:1901701 GO:1902644 GO:1902645
KEGG Pathways
Metabolic & Signaling
ko00790 map00790
Pfam Domains
Protein Families
Aminotran_5 MOSC MOSC_N

Protein Analysis

279

Amino Acids

31.83

Weight (kDa)

6.92

Isoelectric Point (pI)

43.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOSC PF03473 136 - 264 1.7e-13 MOSC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028749)

Species Orthologous Gene IDs
malus_domestica MD00G1130400.v1.1
pyrus_communis pycom10g17410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 530
AccB7I CCANNNNNTGG 1 cut(s) 288
AcoI YGGCCR 1 cut(s) 307
AcsI RAATTY 2 cut(s) 125, 409
AfaI GTAC 3 cut(s) 261, 520, 819
AfiI CCNNNNNNNGG 2 cut(s) 288, 653
AflIII ACRYGT 1 cut(s) 402
AgsI TTSAA 3 cut(s) 223, 409, 803
AjnI CCWGG 1 cut(s) 105
AjuI GAANNNNNNNTTGG 4 cut(s) 7, 39, 275, 307
AluBI AGCT 3 cut(s) 187, 425, 695
AluI AGCT 3 cut(s) 187, 425, 695
Alw21I GWGCWC 1 cut(s) 529
Alw26I GTCTC 1 cut(s) 66
AoxI GGCC 2 cut(s) 307, 566
ApeKI GCWGC 1 cut(s) 536
ApoI RAATTY 2 cut(s) 125, 409
AspLEI GCGC 1 cut(s) 397
AspS9I GGNCC 1 cut(s) 567
AsuHPI GGTGA 1 cut(s) 636
AsuII TTCGAA 2 cut(s) 341, 416
BauI CACGAG 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 194
Bbv12I GWGCWC 1 cut(s) 529
BbvI GCAGC 1 cut(s) 548
BccI CCATC 2 cut(s) 599, 603
BciT130I CCWGG 1 cut(s) 107
BclI TGATCA 1 cut(s) 675
BcoDI GTCTC 1 cut(s) 66
BfuAI ACCTGC 1 cut(s) 530
BisI GCNGC 1 cut(s) 537
BlsI GCNGC 1 cut(s) 538
Bme1390I CCNGG 1 cut(s) 107
BmgT120I GGNCC 1 cut(s) 567
BmiI GGNNCC 2 cut(s) 280, 508
BmrFI CCNGG 1 cut(s) 107
BpiI GAAGAC 1 cut(s) 194
Bpu14I TTCGAA 2 cut(s) 341, 416
Bsa29I ATCGAT 1 cut(s) 154
BsaBI GATNNNNATC 1 cut(s) 819
BsaJI CCNNGG 1 cut(s) 444
Bsc4I CCNNNNNNNGG 2 cut(s) 288, 653
Bse3DI GCAATG 2 cut(s) 304, 352
Bse8I GATNNNNATC 1 cut(s) 819
BseBI CCWGG 1 cut(s) 107
BseCI ATCGAT 1 cut(s) 154
BseDI CCNNGG 1 cut(s) 444
BseGI GGATG 3 cut(s) 614, 662, 820
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 2 cut(s) 288, 653
BseMI GCAATG 2 cut(s) 304, 352
BseMII CTCAG 1 cut(s) 48
BseXI GCAGC 1 cut(s) 548
BsgI GTGCAG 3 cut(s) 51, 406, 725
BshFI GGCC 2 cut(s) 309, 568
BshVI ATCGAT 1 cut(s) 154
BsiHKAI GWGCWC 1 cut(s) 529
BslFI GGGAC 2 cut(s) 797, 822
BslI CCNNNNNNNGG 2 cut(s) 288, 653
BsmAI GTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 797, 822
BsnI GGCC 2 cut(s) 309, 568
Bsp119I TTCGAA 2 cut(s) 341, 416
Bsp1286I GDGCHC 1 cut(s) 529
Bsp1407I TGTACA 2 cut(s) 518, 817
Bsp143I GATC 3 cut(s) 151, 155, 675
BspANI GGCC 2 cut(s) 309, 568
BspCNI CTCAG 1 cut(s) 49
BspDI ATCGAT 1 cut(s) 154
BspLI GGNNCC 2 cut(s) 280, 508
BspMI ACCTGC 1 cut(s) 530
BspT104I TTCGAA 2 cut(s) 341, 416
BsrDI GCAATG 2 cut(s) 304, 352
BsrGI TGTACA 2 cut(s) 518, 817
BssECI CCNNGG 1 cut(s) 444
BssMI GATC 3 cut(s) 151, 155, 675
BssSI CACGAG 1 cut(s) 528
Bst2BI CACGAG 1 cut(s) 528
Bst2UI CCWGG 1 cut(s) 107
Bst4CI ACNGT 1 cut(s) 264
BstAUI TGTACA 2 cut(s) 518, 817
BstBI TTCGAA 2 cut(s) 341, 416
BstDEI CTNAG 2 cut(s) 57, 248
BstF5I GGATG 3 cut(s) 614, 662, 820
BstHHI GCGC 1 cut(s) 397
BstKTI GATC 3 cut(s) 154, 158, 678
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 3 cut(s) 151, 155, 675
BstMWI GCNNNNNNNGC 2 cut(s) 315, 533
BstNI CCWGG 1 cut(s) 107
BstNSI RCATGY 2 cut(s) 385, 406
BstSCI CCNGG 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 548
BstV2I GAAGAC 1 cut(s) 194
Bsu15I ATCGAT 1 cut(s) 154
BsuRI GGCC 2 cut(s) 309, 568
BsuTUI ATCGAT 1 cut(s) 154
BtsCI GGATG 3 cut(s) 614, 662, 820
BtsIMutI CAGTG 1 cut(s) 269
BveI ACCTGC 1 cut(s) 530
CfoI GCGC 1 cut(s) 397
Cfr13I GGNCC 1 cut(s) 567
ClaI ATCGAT 1 cut(s) 154
Csp6I GTAC 3 cut(s) 260, 519, 818
CviAII CATG 3 cut(s) 315, 382, 403
CviJI RGCY 7 cut(s) 187, 281, 309, 425, 568, 695, 799
CviKI_1 RGCY 7 cut(s) 187, 281, 309, 425, 568, 695, 799
CviQI GTAC 3 cut(s) 260, 519, 818
DdeI CTNAG 2 cut(s) 57, 248
DpnI GATC 3 cut(s) 153, 157, 677
DpnII GATC 3 cut(s) 151, 155, 675
EaeI YGGCCR 1 cut(s) 307
Eco32I GATATC 1 cut(s) 441
EcoRII CCWGG 1 cut(s) 105
EcoRV GATATC 1 cut(s) 441
FaeI CATG 3 cut(s) 318, 385, 406
FalI AAGNNNNNCTT 2 cut(s) 722, 754
FaqI GGGAC 2 cut(s) 797, 822
FatI CATG 3 cut(s) 314, 381, 402
FauNDI CATATG 1 cut(s) 598
FbaI TGATCA 1 cut(s) 675
Fnu4HI GCNGC 1 cut(s) 537
FokI GGATG 3 cut(s) 621, 669, 807
Fsp4HI GCNGC 1 cut(s) 537
GlaI GCGC 1 cut(s) 396
GluI GCNGC 1 cut(s) 537
HaeIII GGCC 2 cut(s) 309, 568
HhaI GCGC 1 cut(s) 397
Hin1II CATG 3 cut(s) 318, 385, 406
Hin6I GCGC 1 cut(s) 395
HinP1I GCGC 1 cut(s) 395
HinfI GANTC 4 cut(s) 59, 141, 733, 745
HphI GGTGA 1 cut(s) 636
Hpy188I TCNGA 5 cut(s) 58, 445, 460, 753, 825
HpyCH4III ACNGT 1 cut(s) 264
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 4 cut(s) 32, 318, 387, 706
HpyF10VI GCNNNNNNNGC 2 cut(s) 315, 533
HpyF3I CTNAG 2 cut(s) 57, 248
HpySE526I ACGT 1 cut(s) 6
Hsp92II CATG 3 cut(s) 318, 385, 406
HspAI GCGC 1 cut(s) 395
Ksp22I TGATCA 1 cut(s) 675
Kzo9I GATC 3 cut(s) 151, 155, 675
LmnI GCTCC 2 cut(s) 278, 533
LpnPI CCDG 9 cut(s) 92, 119, 371, 383, 482, 507, 525, 570, 681
Lsp1109I GCAGC 1 cut(s) 548
MaeII ACGT 1 cut(s) 6
MaeIII GTNAC 2 cut(s) 211, 266
MalI GATC 3 cut(s) 153, 157, 677
MboI GATC 3 cut(s) 151, 155, 675
MboII GAAGA 4 cut(s) 122, 194, 614, 740
MhlI GDGCHC 1 cut(s) 529
MluCI AATT 5 cut(s) 125, 286, 343, 409, 624
MlyI GAGTC 1 cut(s) 68
MnlI CCTC 7 cut(s) 64, 91, 385, 439, 473, 520, 584
MslI CAYNNNNRTG 1 cut(s) 485
MspR9I CCNGG 1 cut(s) 107
MvaI CCWGG 1 cut(s) 107
MwoI GCNNNNNNNGC 2 cut(s) 315, 533
NdeI CATATG 1 cut(s) 598
NdeII GATC 3 cut(s) 151, 155, 675
NlaIII CATG 3 cut(s) 318, 385, 406
NlaIV GGNNCC 2 cut(s) 280, 508
NspI RCATGY 2 cut(s) 385, 406
NspV TTCGAA 2 cut(s) 341, 416
PciI ACATGT 1 cut(s) 402
PfeI GAWTC 3 cut(s) 141, 733, 745
PflMI CCANNNNNTGG 1 cut(s) 288
PfoI TCCNGGA 1 cut(s) 105
PkrI GCNGC 1 cut(s) 538
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
PscI ACATGT 1 cut(s) 402
Psp6I CCWGG 1 cut(s) 105
PspGI CCWGG 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 280, 508
PspPI GGNCC 1 cut(s) 567
RsaI GTAC 3 cut(s) 261, 520, 819
RsaNI GTAC 3 cut(s) 260, 519, 818
RseI CAYNNNNRTG 1 cut(s) 485
SatI GCNGC 1 cut(s) 537
Sau3AI GATC 3 cut(s) 151, 155, 675
Sau96I GGNCC 1 cut(s) 567
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 1 cut(s) 107
SduI GDGCHC 1 cut(s) 529
SfuI TTCGAA 2 cut(s) 341, 416
SmiMI CAYNNNNRTG 1 cut(s) 485
Sse9I AATT 5 cut(s) 125, 286, 343, 409, 624
StyD4I CCNGG 1 cut(s) 105
TaaI ACNGT 1 cut(s) 264
TaiI ACGT 1 cut(s) 9
TaqI TCGA 3 cut(s) 154, 341, 416
TaqII GACCGA 1 cut(s) 66
TasI AATT 5 cut(s) 125, 286, 343, 409, 624
TatI WGTACW 3 cut(s) 259, 518, 817
TfiI GAWTC 3 cut(s) 141, 733, 745
TscAI CASTG 1 cut(s) 269
TseI GCWGC 1 cut(s) 536
TspDTI ATGAA 6 cut(s) 194, 270, 435, 615, 677, 732
TspRI CASTG 1 cut(s) 269
Van91I CCANNNNNTGG 1 cut(s) 288
XapI RAATTY 2 cut(s) 125, 409
XceI RCATGY 2 cut(s) 385, 406
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.