MD00G1160800.v1.1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0022317
Physical Location & Seq
Reverse (-)
35683525 .. 35684946
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1160800.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGAAAGTTGAGGCTATCGTCGGCCGCGAACATTCCGATGCTTCTATCGGCTGTTTGCAGGACTTTGTCCTGATTCTGTACCAGCTTCTTCTTCCTGAAGGAGCCAGCCGAGGTGATATTTTGTACAGGAGCACAATCGATGTCTCCATCCACAAGAAGGGTGTCCTTGAGAGGTACGAGAGTGACCCGAATTATCAGTTTTTACACGATCGTGTTTCGGATGTTTTTGCGGCCAACTTTAGGTCTGATTTTGAAAAGTTGAAGAAAAAGAAGCCCAATGAGAAGATGTATCATAATGAGTTTAGCAAGGCAAGTGCGCCCGACGTCCTGGGACCTCAAGCCAGGTACATACCGTACGGTGCCAACAATACCGAATACGGCGCCAGTGTTGCGGTCGCTACTACTTTTCTGTGCGAAAGCATCGCGAGGAAGGTTTTTCCTTGTGAGTTGGACGTGGAAAGGGACGAGGCTCATTACACACACATAGTCCTGAATCGGCTGAGTAAGGAGGTTTTGGAGCCCGTGTGGAGCATGGAGTATTGTCCACGTTTTTCGGTGTGTAAGGTTAGGCAGTATCTGGAGGACGTGAAAGCCAGCAAGTCTAAGATTGCGGCAGATGCTCTGCTTCCGCATGAAATCATCCGCTATGTGAATGATCCTCATGCAGATAACATGCATGATGTAAAATATTATTCCGATGTGGATGATTCCTATGTGGTTGATCGTCCGGATGTTGGGGACGTAGCTAAGCTTCAATGGAAGGCAATGGTGGACGATTTGTCTAACAAAGGCAAGTGGAAGAACTGCTTGGCTGTATGTGAATTCTTCACGGACCGTTCTGACGTGTCCAAGTCTGGCTTGTCCGAGGTTATGGGGCTACTGGTGTCTCAACTGAATGATAAAGAGTCCTGGAAAGGAAAGGTCATCCCTTTCACTCGGAATCCCAAACGGCTCCATCTCATACAAGGCGATGATCTCAAGTCCAAGCTCGCCTGCTTCAGAGGCACGGGCATCAGCGGAAATAGCGCGACAACTCAAAAGGTATTTGATTTTATTCTTCAAGAGGCTGTGAATGCCAATTTAACGCCAGAGCAGATGATCAAAAGGGTGCTAGTTTTTGTCCGCATGGACTTTGATATGTCGTCTATCCAGGCCGAGCACTGGCCGATCACTTATCAGATAATGAGGAGCAAGTTTGAAGAGAAAGGCTATGCAGTGCCACACATAGTGTTCTGGTACATGTACTCCCGCGACAGCGACATGGTCGTATCTTCACAAGTATCGGGGATGACCACCTTCACAGGCTACACCGACGATTTCTTTAAGTTGTTCTTGGATAGGGAGGGAGATGTCAGCCCTAATCATGCCATGGAAGCAGCAATATGTGGAAAAGAGTACCAAAACCTGGTTGTAGTCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

474

Amino Acids

53.94

Weight (kDa)

5.78

Isoelectric Point (pI)

31.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 51 - 182 4.2e-13 Domain of unknown function (DUF2828)
DUF2828 PF11443 189 - 265 2.1e-11 Domain of unknown function (DUF2828)
DUF7788 PF25043 268 - 453 1.7e-37 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022317)

Species Orthologous Gene IDs
malus_domestica MD00G1160800.v1.1 MD00G1160900.v1.1 MD06G1229000.v1.1
pyrus_communis pycom06g20020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 327
AccB1I GGYRCC 2 cut(s) 359, 380
AccB7I CCANNNNNTGG 1 cut(s) 1405
AccI GTMKAC 1 cut(s) 1416
AccII CGCG 4 cut(s) 27, 425, 1028, 1251
AccIII TCCGGA 1 cut(s) 727
AciI CCGC 9 cut(s) 25, 230, 392, 611, 629, 643, 1017, 1123, 1249
AclWI GGATC 1 cut(s) 650
AcoI YGGCCR 3 cut(s) 22, 231, 1163
AcsI RAATTY 1 cut(s) 821
AcuI CTGAAG 2 cut(s) 117, 982
AcyI GRCGYC 2 cut(s) 324, 381
AdeI CACNNNGTG 1 cut(s) 1228
AfaI GTAC 8 cut(s) 80, 125, 176, 347, 356, 1238, 1244, 1397
AfiI CCNNNNNNNGG 5 cut(s) 157, 240, 734, 1161, 1405
AflIII ACRYGT 2 cut(s) 843, 1239
AgsI TTSAA 5 cut(s) 254, 262, 755, 1061, 1199
AhdI GACNNNNNGTC 1 cut(s) 778
AjiI CACGTC 3 cut(s) 454, 586, 844
AjnI CCWGG 5 cut(s) 327, 341, 908, 1149, 1404
AjuI GAANNNNNNNTTGG 2 cut(s) 791, 823
AleI CACNNNNGTG 1 cut(s) 210
AluBI AGCT 4 cut(s) 85, 746, 751, 988
AluI AGCT 4 cut(s) 85, 746, 751, 988
Alw21I GWGCWC 2 cut(s) 134, 1161
Alw26I GTCTC 2 cut(s) 148, 891
AlwI GGATC 1 cut(s) 650
AlwNI CAGNNNCTG 1 cut(s) 577
Aor13HI TCCGGA 1 cut(s) 727
AoxI GGCC 4 cut(s) 22, 231, 1152, 1163
ApeKI GCWGC 1 cut(s) 1376
ApoI RAATTY 1 cut(s) 821
AspLEI GCGC 3 cut(s) 319, 383, 1028
AspS9I GGNCC 2 cut(s) 332, 832
AsuHPI GGTGA 1 cut(s) 125
AvaII GGWCC 2 cut(s) 332, 832
BaeI ACNNNNGTAYC 2 cut(s) 166, 199
BanI GGYRCC 2 cut(s) 359, 380
BanII GRGCYC 1 cut(s) 522
BarI GAAGNNNNNNTAC 2 cut(s) 735, 767
Bbv12I GWGCWC 2 cut(s) 134, 1161
BbvI GCAGC 1 cut(s) 1388
BccI CCATC 2 cut(s) 155, 963
BceAI ACGGC 2 cut(s) 394, 965
BciT130I CCWGG 5 cut(s) 329, 343, 910, 1151, 1406
BclI TGATCA 1 cut(s) 1098
BcoDI GTCTC 2 cut(s) 148, 891
BfaI CTAG 1 cut(s) 1112
BfoI RGCGCY 1 cut(s) 384
BisI GCNGC 4 cut(s) 25, 231, 612, 1377
BlpI GCTNAGC 1 cut(s) 747
BlsI GCNGC 4 cut(s) 26, 232, 613, 1378
Bme1390I CCNGG 5 cut(s) 329, 343, 910, 1151, 1406
Bme18I GGWCC 2 cut(s) 332, 832
BmeRI GACNNNNNGTC 1 cut(s) 778
BmgBI CACGTC 3 cut(s) 454, 586, 844
BmgT120I GGNCC 2 cut(s) 332, 832
BmiI GGNNCC 6 cut(s) 103, 333, 361, 382, 519, 953
BmrFI CCNGG 5 cut(s) 329, 343, 910, 1151, 1406
BmsI GCATC 4 cut(s) 28, 429, 607, 1020
BpmI CTGGAG 1 cut(s) 599
Bpu1102I GCTNAGC 1 cut(s) 747
BpuEI CTTGAG 3 cut(s) 188, 321, 962
Bsa29I ATCGAT 1 cut(s) 138
BsaHI GRCGYC 2 cut(s) 324, 381
BsaJI CCNNGG 4 cut(s) 109, 328, 864, 1368
BsaWI WCCGGW 1 cut(s) 727
BsaXI ACNNNNNCTCC 4 cut(s) 509, 539, 1229, 1259
Bsc4I CCNNNNNNNGG 5 cut(s) 157, 240, 734, 1161, 1405
Bse1I ACTGG 3 cut(s) 384, 885, 1166
Bse3DI GCAATG 1 cut(s) 771
BseAI TCCGGA 1 cut(s) 727
BseBI CCWGG 5 cut(s) 329, 343, 910, 1151, 1406
BseCI ATCGAT 1 cut(s) 138
BseDI CCNNGG 4 cut(s) 109, 328, 864, 1368
BseGI GGATG 7 cut(s) 147, 226, 639, 709, 736, 924, 1293
BseLI CCNNNNNNNGG 5 cut(s) 157, 240, 734, 1161, 1405
BseMI GCAATG 1 cut(s) 771
BseMII CTCAG 1 cut(s) 491
BseNI ACTGG 3 cut(s) 384, 885, 1166
BseRI GAGGAG 1 cut(s) 1201
BseX3I CGGCCG 1 cut(s) 22
BseXI GCAGC 1 cut(s) 1388
Bsh1236I CGCG 4 cut(s) 27, 425, 1028, 1251
Bsh1285I CGRYCG 3 cut(s) 25, 211, 396
BshFI GGCC 4 cut(s) 24, 233, 1154, 1165
BshNI GGYRCC 2 cut(s) 359, 380
BshVI ATCGAT 1 cut(s) 138
BsiEI CGRYCG 3 cut(s) 25, 211, 396
BsiHKAI GWGCWC 2 cut(s) 134, 1161
BsiSI CCGG 1 cut(s) 728
BsiWI CGTACG 1 cut(s) 354
BslFI GGGAC 3 cut(s) 345, 476, 752
BslI CCNNNNNNNGG 5 cut(s) 157, 240, 734, 1161, 1405
BsmAI GTCTC 2 cut(s) 148, 891
BsmFI GGGAC 3 cut(s) 345, 476, 752
BsmI GAATGC 1 cut(s) 1078
BsnI GGCC 4 cut(s) 24, 233, 1154, 1165
Bsp1286I GDGCHC 3 cut(s) 134, 522, 1161
Bsp13I TCCGGA 1 cut(s) 727
Bsp1407I TGTACA 1 cut(s) 123
Bsp143I GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
Bsp1720I GCTNAGC 1 cut(s) 747
Bsp19I CCATGG 1 cut(s) 1368
Bsp68I TCGCGA 1 cut(s) 425
BspACI CCGC 9 cut(s) 25, 230, 392, 611, 629, 643, 1017, 1123, 1249
BspANI GGCC 4 cut(s) 24, 233, 1154, 1165
BspCNI CTCAG 1 cut(s) 492
BspDI ATCGAT 1 cut(s) 138
BspEI TCCGGA 1 cut(s) 727
BspFNI CGCG 4 cut(s) 27, 425, 1028, 1251
BspLI GGNNCC 6 cut(s) 103, 333, 361, 382, 519, 953
BspPI GGATC 1 cut(s) 650
BspT107I GGYRCC 2 cut(s) 359, 380
BsrDI GCAATG 1 cut(s) 771
BsrGI TGTACA 1 cut(s) 123
BsrI ACTGG 3 cut(s) 384, 885, 1166
BssECI CCNNGG 4 cut(s) 109, 328, 864, 1368
BssMI GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
BssNI GRCGYC 2 cut(s) 324, 381
BssT1I CCWWGG 1 cut(s) 1368
Bst2UI CCWGG 5 cut(s) 329, 343, 910, 1151, 1406
Bst4CI ACNGT 3 cut(s) 354, 359, 836
Bst6I CTCTTC 1 cut(s) 1194
BstACI GRCGYC 2 cut(s) 324, 381
BstAUI TGTACA 1 cut(s) 123
BstC8I GCNNGC 4 cut(s) 106, 595, 990, 994
BstDEI CTNAG 3 cut(s) 500, 603, 747
BstDSI CCRYGG 1 cut(s) 1368
BstF5I GGATG 7 cut(s) 147, 226, 639, 709, 736, 924, 1293
BstFNI CGCG 4 cut(s) 27, 425, 1028, 1251
BstH2I RGCGCY 1 cut(s) 384
BstHHI GCGC 3 cut(s) 319, 383, 1028
BstKTI GATC 6 cut(s) 211, 658, 724, 976, 1101, 1170
BstMAI GTCTC 2 cut(s) 148, 891
BstMBI GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
BstMCI CGRYCG 3 cut(s) 25, 211, 396
BstMWI GCNNNNNNNGC 6 cut(s) 389, 617, 1002, 1023, 1073, 1373
BstNI CCWGG 5 cut(s) 329, 343, 910, 1151, 1406
BstNSI RCATGY 2 cut(s) 676, 1243
BstSCI CCNGG 5 cut(s) 327, 341, 908, 1149, 1404
BstUI CGCG 4 cut(s) 27, 425, 1028, 1251
BstV1I GCAGC 1 cut(s) 1388
BstZI CGGCCG 1 cut(s) 22
Bsu15I ATCGAT 1 cut(s) 138
BsuRI GGCC 4 cut(s) 24, 233, 1154, 1165
BsuTUI ATCGAT 1 cut(s) 138
BtgI CCRYGG 1 cut(s) 1368
BtgZI GCGATG 2 cut(s) 406, 984
BtrI CACGTC 3 cut(s) 454, 586, 844
BtsCI GGATG 7 cut(s) 147, 226, 639, 709, 736, 924, 1293
BtsI GCAGTG 1 cut(s) 1221
BtsIMutI CAGTG 3 cut(s) 391, 1159, 1221
BtuMI TCGCGA 1 cut(s) 425
Cac8I GCNNGC 4 cut(s) 106, 595, 990, 994
CaiI CAGNNNCTG 1 cut(s) 577
CfoI GCGC 3 cut(s) 319, 383, 1028
Cfr13I GGNCC 2 cut(s) 332, 832
ClaI ATCGAT 1 cut(s) 138
CpoI CGGWCCG 1 cut(s) 832
CsiI ACCWGGT 1 cut(s) 1404
Csp6I GTAC 8 cut(s) 79, 124, 175, 346, 355, 1237, 1243, 1396
CspI CGGWCCG 1 cut(s) 832
CviQI GTAC 8 cut(s) 79, 124, 175, 346, 355, 1237, 1243, 1396
DdeI CTNAG 3 cut(s) 500, 603, 747
DinI GGCGCC 1 cut(s) 382
DpnI GATC 6 cut(s) 210, 657, 723, 975, 1100, 1169
DpnII GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
DraIII CACNNNGTG 1 cut(s) 1228
DriI GACNNNNNGTC 1 cut(s) 778
EaeI YGGCCR 3 cut(s) 22, 231, 1163
EagI CGGCCG 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 1194
Eam1105I GACNNNNNGTC 1 cut(s) 778
EarI CTCTTC 1 cut(s) 1194
EclXI CGGCCG 1 cut(s) 22
Eco130I CCWWGG 1 cut(s) 1368
Eco24I GRGCYC 1 cut(s) 522
Eco47I GGWCC 2 cut(s) 332, 832
Eco52I CGGCCG 1 cut(s) 22
Eco57I CTGAAG 2 cut(s) 117, 982
EcoO109I RGGNCCY 1 cut(s) 332
EcoRI GAATTC 1 cut(s) 821
EcoRII CCWGG 5 cut(s) 327, 341, 908, 1149, 1404
EcoT14I CCWWGG 1 cut(s) 1368
EcoT22I ATGCAT 1 cut(s) 678
EcoT38I GRGCYC 1 cut(s) 522
EgeI GGCGCC 1 cut(s) 382
EheI GGCGCC 1 cut(s) 382
ErhI CCWWGG 1 cut(s) 1368
FalI AAGNNNNNCTT 6 cut(s) 791, 823, 842, 874, 1316, 1348
FaqI GGGAC 3 cut(s) 345, 476, 752
FauI CCCGC 1 cut(s) 1256
FbaI TGATCA 1 cut(s) 1098
FblI GTMKAC 1 cut(s) 1416
Fnu4HI GCNGC 4 cut(s) 25, 231, 612, 1377
FokI GGATG 7 cut(s) 134, 233, 626, 716, 743, 911, 1300
FriOI GRGCYC 1 cut(s) 522
Fsp4HI GCNGC 4 cut(s) 25, 231, 612, 1377
FspBI CTAG 1 cut(s) 1112
GlaI GCGC 3 cut(s) 318, 382, 1027
GluI GCNGC 4 cut(s) 25, 231, 612, 1377
GsuI CTGGAG 1 cut(s) 599
HaeII RGCGCY 1 cut(s) 384
HaeIII GGCC 4 cut(s) 24, 233, 1154, 1165
HapII CCGG 1 cut(s) 728
HhaI GCGC 3 cut(s) 319, 383, 1028
Hin1I GRCGYC 2 cut(s) 324, 381
Hin6I GCGC 3 cut(s) 317, 381, 1026
HinP1I GCGC 3 cut(s) 317, 381, 1026
HincII GTYRAC 1 cut(s) 1417
HindII GTYRAC 1 cut(s) 1417
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 5 cut(s) 73, 493, 707, 905, 940
HpaII CCGG 1 cut(s) 728
HphI GGTGA 1 cut(s) 125
Hpy166II GTNNAC 3 cut(s) 545, 772, 1417
Hpy188I TCNGA 9 cut(s) 37, 220, 247, 697, 841, 865, 939, 1001, 1179
Hpy188III TCNNGA 7 cut(s) 70, 95, 424, 490, 578, 728, 1061
Hpy8I GTNNAC 3 cut(s) 545, 772, 1417
Hpy99I CGWCG 3 cut(s) 23, 326, 1316
HpyAV CCTTC 5 cut(s) 92, 151, 424, 754, 1306
HpyCH4III ACNGT 3 cut(s) 354, 359, 836
HpyCH4IV ACGT 6 cut(s) 324, 453, 547, 585, 741, 843
HpyCH4V TGCA 4 cut(s) 58, 665, 676, 1214
HpyF10VI GCNNNNNNNGC 6 cut(s) 389, 617, 1002, 1023, 1073, 1373
HpyF3I CTNAG 3 cut(s) 500, 603, 747
HpySE526I ACGT 6 cut(s) 324, 453, 547, 585, 741, 843
Hsp92I GRCGYC 2 cut(s) 324, 381
HspAI GCGC 3 cut(s) 317, 381, 1026
KasI GGCGCC 1 cut(s) 380
Kpn2I TCCGGA 1 cut(s) 727
Ksp22I TGATCA 1 cut(s) 1098
Kzo9I GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
LmnI GCTCC 6 cut(s) 101, 129, 517, 528, 957, 1188
Lsp1109I GCAGC 1 cut(s) 1388
LweI GCATC 4 cut(s) 28, 429, 607, 1020
MabI ACCWGGT 1 cut(s) 1404
MaeI CTAG 1 cut(s) 1112
MaeII ACGT 6 cut(s) 324, 453, 547, 585, 741, 843
MaeIII GTNAC 1 cut(s) 182
MalI GATC 6 cut(s) 210, 657, 723, 975, 1100, 1169
MboI GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
MboII GAAGA 9 cut(s) 80, 83, 274, 295, 811, 817, 1049, 1211, 1263
MhlI GDGCHC 3 cut(s) 134, 522, 1161
MluCI AATT 3 cut(s) 190, 821, 1078
Mly113I GGCGCC 1 cut(s) 381
MlyI GAGTC 1 cut(s) 914
MmeI TCCRAC 1 cut(s) 429
Mph1103I ATGCAT 1 cut(s) 678
MroI TCCGGA 1 cut(s) 727
MseI TTAA 2 cut(s) 1082, 1323
MslI CAYNNNNRTG 2 cut(s) 36, 210
MspA1I CMGCKG 1 cut(s) 1017
MspI CCGG 1 cut(s) 728
MspR9I CCNGG 5 cut(s) 329, 343, 910, 1151, 1406
Mva1269I GAATGC 1 cut(s) 1078
MvaI CCWGG 5 cut(s) 329, 343, 910, 1151, 1406
MvnI CGCG 4 cut(s) 27, 425, 1028, 1251
MwoI GCNNNNNNNGC 6 cut(s) 389, 617, 1002, 1023, 1073, 1373
NarI GGCGCC 1 cut(s) 381
NcoI CCATGG 1 cut(s) 1368
NdeII GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
NlaIV GGNNCC 6 cut(s) 103, 333, 361, 382, 519, 953
NmeAIII GCCGAG 2 cut(s) 134, 1180
NmuCI GTSAC 1 cut(s) 182
NruI TCGCGA 1 cut(s) 425
NsiI ATGCAT 1 cut(s) 678
NspI RCATGY 2 cut(s) 676, 1243
OliI CACNNNNGTG 1 cut(s) 210
PciI ACATGT 1 cut(s) 1239
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PctI GAATGC 1 cut(s) 1078
PfeI GAWTC 4 cut(s) 73, 493, 707, 940
Pfl23II CGTACG 1 cut(s) 354
PflFI GACNNNGTC 2 cut(s) 65, 1262
PflMI CCANNNNNTGG 1 cut(s) 1405
PfoI TCCNGGA 1 cut(s) 908
PkrI GCNGC 4 cut(s) 26, 232, 613, 1378
Ple19I CGATCG 1 cut(s) 211
PleI GAGTC 1 cut(s) 913
PluTI GGCGCC 1 cut(s) 384
PpsI GAGTC 1 cut(s) 913
PpuMI RGGWCCY 1 cut(s) 332
PscI ACATGT 1 cut(s) 1239
Psp5II RGGWCCY 1 cut(s) 332
Psp6I CCWGG 5 cut(s) 327, 341, 908, 1149, 1404
PspGI CCWGG 5 cut(s) 327, 341, 908, 1149, 1404
PspLI CGTACG 1 cut(s) 354
PspN4I GGNNCC 6 cut(s) 103, 333, 361, 382, 519, 953
PspPI GGNCC 2 cut(s) 332, 832
PspPPI RGGWCCY 1 cut(s) 332
PstNI CAGNNNCTG 1 cut(s) 577
PsyI GACNNNGTC 2 cut(s) 65, 1262
PvuI CGATCG 1 cut(s) 211
RruI TCGCGA 1 cut(s) 425
RsaI GTAC 8 cut(s) 80, 125, 176, 347, 356, 1238, 1244, 1397
RsaNI GTAC 8 cut(s) 79, 124, 175, 346, 355, 1237, 1243, 1396
RseI CAYNNNNRTG 2 cut(s) 36, 210
Rsr2I CGGWCCG 1 cut(s) 832
RsrII CGGWCCG 1 cut(s) 832
SalI GTCGAC 1 cut(s) 1415
SaqAI TTAA 2 cut(s) 1082, 1323
SatI GCNGC 4 cut(s) 25, 231, 612, 1377
Sau3AI GATC 6 cut(s) 208, 655, 721, 973, 1098, 1167
Sau96I GGNCC 2 cut(s) 332, 832
SchI GAGTC 1 cut(s) 914
ScrFI CCNGG 5 cut(s) 329, 343, 910, 1151, 1406
SduI GDGCHC 3 cut(s) 134, 522, 1161
SexAI ACCWGGT 1 cut(s) 1404
SfaNI GCATC 4 cut(s) 28, 429, 607, 1020
SfoI GGCGCC 1 cut(s) 382
SinI GGWCC 2 cut(s) 332, 832
SmiMI CAYNNNNRTG 2 cut(s) 36, 210
SmlI CTYRAG 3 cut(s) 167, 336, 977
SmoI CTYRAG 3 cut(s) 167, 336, 977
Sse9I AATT 3 cut(s) 190, 821, 1078
SsiI CCGC 9 cut(s) 25, 230, 392, 611, 629, 643, 1017, 1123, 1249
SspDI GGCGCC 1 cut(s) 380
SspI AATATT 1 cut(s) 689
SspMI CTAG 1 cut(s) 1112
StyD4I CCNGG 5 cut(s) 327, 341, 908, 1149, 1404
StyI CCWWGG 1 cut(s) 1368
TaaI ACNGT 3 cut(s) 354, 359, 836
TaiI ACGT 6 cut(s) 327, 456, 550, 588, 744, 846
TaqI TCGA 2 cut(s) 138, 1416
TasI AATT 3 cut(s) 190, 821, 1078
TatI WGTACW 2 cut(s) 123, 1242
TauI GCSGC 3 cut(s) 27, 233, 614
TfiI GAWTC 4 cut(s) 73, 493, 707, 940
Tru1I TTAA 2 cut(s) 1082, 1323
Tru9I TTAA 2 cut(s) 1082, 1323
TscAI CASTG 3 cut(s) 391, 1166, 1221
TseFI GTSAC 1 cut(s) 182
TseI GCWGC 1 cut(s) 1376
Tsp45I GTSAC 1 cut(s) 182
TspDTI ATGAA 2 cut(s) 17, 648
TspGWI ACGGA 1 cut(s) 845
TspRI CASTG 3 cut(s) 391, 1166, 1221
Tth111I GACNNNGTC 2 cut(s) 65, 1262
Van91I CCANNNNNTGG 1 cut(s) 1405
VpaK11BI GGWCC 2 cut(s) 332, 832
XapI RAATTY 1 cut(s) 821
XceI RCATGY 2 cut(s) 676, 1243
XmiI GTMKAC 1 cut(s) 1416
XspI CTAG 1 cut(s) 1112
ZraI GACGTC 1 cut(s) 325
Zsp2I ATGCAT 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.