Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0010194

Physical Location & Seq

Genomic Coordinates Reverse (-)

15342007 .. 15346021

Gene Structure 4015 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1050300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGGGTCACCTGAACCTGCCCGCATCGAAGCGGAGCCCGCGGCAGTGGCGCCTCCTGGACCTTATCTCGGCGGTCTTCTTCGGCATAGTGATTGTCTTCTTCCTCTTAGTCTTCACTCCCTTGGGCGACTCGCTCGCCGCCTCAGGTCGCCAGGCTCTTCTCTTATCGACCAACGCCGATCCGAAGCAACGGCACCGTCTAGTGGCGTTGGTGGAGCTCGGACAGCACCACCAGCCCATTGAAGCCTGCCCAGCCAATGCCGTCGACCATATGCCCTGTGAGGACCCCCGGCGCAACAGCCAGTTGAGTCGGGAAATGAACTTTTACAGAGAGAGGCATTGCCCTCTGCCTGAGGAGACCCCGCTCTGCTTGATCCCACCTCCCAATGGCTACAAGATTCCGGTCCGGTGGCCCGACAGCTTGACCAAGATATGGCATGACAACATGCCACACAACAAAATAGCAGACAGGAAAGGTCATCAGGGATGGATGAAACTGGAAGGCCCACACTTCATTTTCCCTGGTGGTGGCACTATGTTTCCCGATGGAGCTATACAATATATCGATAAACTTGGACAGTACATCCCTATAAGTGATGGTGTTCTGAGAACTGCTCTCGATATGGGTTGTGGGGTTGCCAGTTTTGGGGGTTATCTTCTATCCAAAGACATTTTGGCAATGTCTTTTGCCCCAAGAGATTCACACAAGTCACAGATACAATTTGCACTTGAAAGAGGAATTCCAGCATTTGTTGCCATGCTTGGCACTCGCAGACTTCCATTTCCTGCTTTCTCATTTGATTTGATGCATTGCTCTCGATGTTTGATCCCTTTTACTGCCTATAATGCCACATATTTCCTTGAAGTGGATCGGTTACTCCGCCCAGGAGGATACCTAGTAATCTCTGGCCCTCCCGTGCAATGGGCTAATCAAGACAAGGAATGGGCAGATCTCCAAGCTGTCGCAAGAGCATTGTGTTATGAGCTGATTGCTGTGGATGGAAACACAGCTGTCTGGAAAAAGCCTGCTGGTGATTCATGCCTTCCTAACCAAAATGAATTTGGTCTTGAATTGTGTGATGAATCAGATGACGCAAGTGATGCATGGTACTACACGTTAAAGAAATGTGTGAGTAGGACGTCTTCTGTCAAGGGAGAATTTGCTGTTGGGATGATTCCAAAGTGGCCAGAGAGGCTGACAAAAGCTCCTGCAAGAGCCACACTCATGAGAAATGGCATCGACGTGTTTGAGGCTGACACACGACGATGGGCAAGAAGAGTTGCTTACTATAAGAACACCCTAAACCTGAAGCTTGGAACTCCAGCTGTACGCAATGTCATGGACATGAATGCATTTTTTGGAGGCTTTGCTGCTGCACTGAAATCTGACGCTGTGTGGGTGATGAATGTTGTTCCAGCCCGCAAGTCCTCAACGCTTTCTGTAATCTTTGACAGAGGTCTTATTGGAGTCTACCATGACTGGTGTGAGCCTTTCTCAACATACCCTCGTTCTTATGATTTCATCCATGTAACGGGCATCGAATCACTTATAAAGCATCCAGGTTCAACCAAGAACAGATGTAACATAGTTGATTTGATGGTGGAGATGGATCGAATGTTGCGGCCCGAAGGAACCGTTGTGGTCAGAGACTCCCCTGAAGTTATTGAAAAAATAGCTCGGATAGCTCATGCCGTAAGGTGGACTGCTACCATACATGAAAAAGAAGCAGCATCGCACGGGCGAGAAAAAGTTCTCGTTGCAACGAAAATCTTTTGGCAGTTGCCTTCGGTGTCCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009664 GO:0009987 GO:0010393 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016741 GO:0017144 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0052546 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

600

Amino Acids

67.23

Weight (kDa)

8.75

Isoelectric Point (pI)

42.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	89 - 589	5.7e-210	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	206 - 301	1.1e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010194)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00740 AT4G00740
fragaria_vesca	FvH4_7g13340 FvH4_7g13340 FvH4_7g13340 FvH4_7g13340 FvH4_7g13340
malus_domestica	MD01G1050300.v1.1 MD07G1127700.v1.1
prunus_persica	Prupe.2G156800_v2.0.a1
pyrus_communis	pycom01g07520 pycom07g12290
rosa_chinensis	RchiOBHm_Chr1g0352661
rosa_laevigata	RLG00000028323
rosa_multiflora	Rmu_sc0005118.1_g000004
rosa_roxburghii	Rroxscaffold_4G00302510
rosa_rugosa	Rorug01G0230500
rosa_samantha	Rh1AG243800 Rh1BG214400 Rh1CG227800 Rh1DG240500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1550
AatII	GACGTC	1 cut(s)	1142
Acc36I	ACCTGC	1 cut(s)	24
AccB1I	GGYRCC	2 cut(s)	48, 192
AccB7I	CCANNNNNTGG	1 cut(s)	432
AccBSI	CCGCTC	1 cut(s)	364
AccI	GTMKAC	2 cut(s)	264, 1470
AccII	CGCG	1 cut(s)	40
AclWI	GGATC	5 cut(s)	173, 367, 820, 876, 1617
AcoI	YGGCCR	1 cut(s)	1184
AcsI	RAATTY	3 cut(s)	738, 1058, 1157
AcuI	CTGAAG	2 cut(s)	1328, 1677
AcyI	GRCGYC	2 cut(s)	49, 1139
AfaI	GTAC	3 cut(s)	581, 1109, 1329
AflIII	ACRYGT	2 cut(s)	1113, 1242
AgsI	TTSAA	6 cut(s)	242, 731, 863, 1070, 1566, 1667
AjiI	CACGTC	1 cut(s)	1243
AjnI	CCWGG	5 cut(s)	54, 150, 520, 883, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	1149, 1181
Alw21I	GWGCWC	1 cut(s)	219
Alw26I	GTCTC	2 cut(s)	350, 1641
AlwI	GGATC	5 cut(s)	173, 367, 820, 876, 1617
AoxI	GGCC	5 cut(s)	410, 502, 907, 1184, 1622
ApeKI	GCWGC	3 cut(s)	1370, 1373, 1727
ApoI	RAATTY	3 cut(s)	738, 1058, 1157
Asp700I	GAANNNNTTC	1 cut(s)	1749
AspLEI	GCGC	2 cut(s)	51, 294
AspS9I	GGNCC	7 cut(s)	58, 283, 403, 411, 503, 908, 1623
AsuC2I	CCSGG	1 cut(s)	289
AsuHPI	GGTGA	2 cut(s)	1043, 1411
AvaII	GGWCC	3 cut(s)	58, 283, 403
AxyI	CCTNAGG	2 cut(s)	142, 351
BalI	TGGCCA	1 cut(s)	1186
BanI	GGYRCC	2 cut(s)	48, 192
BanII	GRGCYC	2 cut(s)	38, 219
BarI	GAAGNNNNNNTAC	2 cut(s)	1126, 1158
BbsI	GAAGAC	4 cut(s)	67, 88, 103, 1134
Bbv12I	GWGCWC	1 cut(s)	219
BbvI	GCAGC	3 cut(s)	1357, 1360, 1739
BccI	CCATC	7 cut(s)	480, 539, 590, 992, 1260, 1591, 1600
BceAI	ACGGC	3 cut(s)	206, 245, 1676
BcgI	CGANNNNNNTGC	2 cut(s)	797, 831
BciT130I	CCWGG	5 cut(s)	56, 152, 522, 885, 1560
BciVI	GTATCC	1 cut(s)	884
BcnI	CCSGG	1 cut(s)	289
BcoDI	GTCTC	2 cut(s)	350, 1641
BfaI	CTAG	2 cut(s)	200, 896
BfoI	RGCGCY	1 cut(s)	52
BfuAI	ACCTGC	1 cut(s)	24
BfuI	GTATCC	1 cut(s)	884
BglI	GCCNNNNNGGC	1 cut(s)	1192
BglII	AGATCT	1 cut(s)	949
BisI	GCNGC	6 cut(s)	41, 138, 1371, 1374, 1622, 1728
BlsI	GCNGC	6 cut(s)	42, 139, 1372, 1375, 1623, 1729
Bme1390I	CCNGG	6 cut(s)	56, 152, 289, 522, 885, 1560
Bme18I	GGWCC	3 cut(s)	58, 283, 403
BmgBI	CACGTC	1 cut(s)	1243
BmgT120I	GGNCC	7 cut(s)	58, 283, 403, 411, 503, 908, 1623
BmiI	GGNNCC	5 cut(s)	35, 50, 194, 285, 1633
BmrFI	CCNGG	6 cut(s)	56, 152, 289, 522, 885, 1560
BmsI	GCATC	7 cut(s)	32, 795, 1090, 1245, 1545, 1564, 1739
BoxI	GACNNNNGTC	1 cut(s)	1455
BpiI	GAAGAC	4 cut(s)	67, 88, 103, 1134
BplI	GAGNNNNNCTC	6 cut(s)	598, 630, 1206, 1238, 1478, 1510
BpmI	CTGGAG	1 cut(s)	1305
BpuMI	CCSGG	1 cut(s)	289
Bsa29I	ATCGAT	1 cut(s)	564
BsaHI	GRCGYC	2 cut(s)	49, 1139
BsaI	GGTCTC	1 cut(s)	350
BsaJI	CCNNGG	5 cut(s)	38, 120, 287, 520, 883
BsaWI	WCCGGW	2 cut(s)	400, 405
BsaXI	ACNNNNNCTCC	2 cut(s)	1189, 1219
Bse1I	ACTGG	4 cut(s)	301, 501, 639, 1484
Bse21I	CCTNAGG	2 cut(s)	142, 351
Bse3DI	GCAATG	5 cut(s)	337, 684, 808, 926, 1339
BseBI	CCWGG	5 cut(s)	56, 152, 522, 885, 1560
BseCI	ATCGAT	1 cut(s)	564
BseDI	CCNNGG	5 cut(s)	38, 120, 287, 520, 883
BseGI	GGATG	7 cut(s)	491, 495, 582, 1003, 1176, 1521, 1555
BseMI	GCAATG	5 cut(s)	337, 684, 808, 926, 1339
BseMII	CTCAG	3 cut(s)	156, 342, 596
BseNI	ACTGG	4 cut(s)	301, 501, 639, 1484
BseRI	GAGGAG	1 cut(s)	368
BseXI	GCAGC	3 cut(s)	1357, 1360, 1739
BseYI	CCCAGC	1 cut(s)	250
BsgI	GTGCAG	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	40
BshFI	GGCC	5 cut(s)	412, 504, 909, 1186, 1624
BshNI	GGYRCC	2 cut(s)	48, 192
BshVI	ATCGAT	1 cut(s)	564
BsiHKAI	GWGCWC	1 cut(s)	219
BsiSI	CCGG	3 cut(s)	289, 401, 406
BsmAI	GTCTC	2 cut(s)	350, 1641
BsmI	GAATGC	1 cut(s)	1354
BsnI	GGCC	5 cut(s)	412, 504, 909, 1186, 1624
Bso31I	GGTCTC	1 cut(s)	350
Bsp1286I	GDGCHC	2 cut(s)	38, 219
Bsp143I	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
BspANI	GGCC	5 cut(s)	412, 504, 909, 1186, 1624
BspCNI	CTCAG	3 cut(s)	155, 343, 597
BspDI	ATCGAT	1 cut(s)	564
BspFNI	CGCG	1 cut(s)	40
BspHI	TCATGA	1 cut(s)	1224
BspLI	GGNNCC	5 cut(s)	35, 50, 194, 285, 1633
BspMI	ACCTGC	1 cut(s)	24
BspPI	GGATC	5 cut(s)	173, 367, 820, 876, 1617
BspQI	GCTCTTC	1 cut(s)	162
BspT107I	GGYRCC	2 cut(s)	48, 192
BspTNI	GGTCTC	1 cut(s)	350
BsrBI	CCGCTC	1 cut(s)	364
BsrDI	GCAATG	5 cut(s)	337, 684, 808, 926, 1339
BsrI	ACTGG	4 cut(s)	301, 501, 639, 1484
BssECI	CCNNGG	5 cut(s)	38, 120, 287, 520, 883
BssMI	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
BssNI	GRCGYC	2 cut(s)	49, 1139
BssT1I	CCWWGG	1 cut(s)	120
Bst2UI	CCWGG	5 cut(s)	56, 152, 522, 885, 1560
Bst4CI	ACNGT	3 cut(s)	197, 579, 1636
Bst6I	CTCTTC	2 cut(s)	162, 1270
BstACI	GRCGYC	2 cut(s)	49, 1139
BstAPI	GCANNNNNTGC	2 cut(s)	752, 1100
BstC8I	GCNNGC	6 cut(s)	21, 38, 135, 247, 1026, 1420
BstDEI	CTNAG	4 cut(s)	106, 142, 351, 605
BstDSI	CCRYGG	1 cut(s)	38
BstEII	GGTNACC	1 cut(s)	5
BstF5I	GGATG	7 cut(s)	491, 495, 582, 1003, 1176, 1521, 1555
BstFNI	CGCG	1 cut(s)	40
BstH2I	RGCGCY	1 cut(s)	52
BstHHI	GCGC	2 cut(s)	51, 294
BstKTI	GATC	6 cut(s)	181, 375, 828, 871, 952, 1612
BstMAI	GTCTC	2 cut(s)	350, 1641
BstMBI	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
BstNI	CCWGG	5 cut(s)	56, 152, 522, 885, 1560
BstNSI	RCATGY	1 cut(s)	448
BstPAI	GACNNNNGTC	1 cut(s)	1455
BstPI	GGTNACC	1 cut(s)	5
BstSCI	CCNGG	6 cut(s)	54, 150, 287, 520, 883, 1558
BstUI	CGCG	1 cut(s)	40
BstV1I	GCAGC	3 cut(s)	1357, 1360, 1739
BstV2I	GAAGAC	4 cut(s)	67, 88, 103, 1134
BstX2I	RGATCY	1 cut(s)	949
BstYI	RGATCY	1 cut(s)	949
Bsu15I	ATCGAT	1 cut(s)	564
Bsu36I	CCTNAGG	2 cut(s)	142, 351
BsuI	GTATCC	1 cut(s)	884
BsuRI	GGCC	5 cut(s)	412, 504, 909, 1186, 1624
BsuTUI	ATCGAT	1 cut(s)	564
BtgI	CCRYGG	1 cut(s)	38
BtgZI	GCGATG	1 cut(s)	1716
BtrI	CACGTC	1 cut(s)	1243
BtsCI	GGATG	7 cut(s)	491, 495, 582, 1003, 1176, 1521, 1555
BtsI	GCAGTG	1 cut(s)	50
BtsIMutI	CAGTG	2 cut(s)	50, 1376
BveI	ACCTGC	1 cut(s)	24
Cac8I	GCNNGC	6 cut(s)	21, 38, 135, 247, 1026, 1420
CciI	TCATGA	1 cut(s)	1224
CfoI	GCGC	2 cut(s)	51, 294
Cfr13I	GGNCC	7 cut(s)	58, 283, 403, 411, 503, 908, 1623
Cfr42I	CCGCGG	1 cut(s)	41
ClaI	ATCGAT	1 cut(s)	564
CpoI	CGGWCCG	1 cut(s)	403
CseI	GACGC	2 cut(s)	1100, 1397
Csp6I	GTAC	3 cut(s)	580, 1108, 1328
CspI	CGGWCCG	1 cut(s)	403
CviQI	GTAC	3 cut(s)	580, 1108, 1328
DdeI	CTNAG	4 cut(s)	106, 142, 351, 605
DinI	GGCGCC	1 cut(s)	50
DpnI	GATC	6 cut(s)	180, 374, 827, 870, 951, 1611
DpnII	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
EaeI	YGGCCR	1 cut(s)	1184
Eam1104I	CTCTTC	2 cut(s)	162, 1270
EarI	CTCTTC	2 cut(s)	162, 1270
EciI	GGCGGA	1 cut(s)	869
Ecl136II	GAGCTC	1 cut(s)	217
Eco130I	CCWWGG	1 cut(s)	120
Eco24I	GRGCYC	2 cut(s)	38, 219
Eco31I	GGTCTC	1 cut(s)	350
Eco47I	GGWCC	3 cut(s)	58, 283, 403
Eco53kI	GAGCTC	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	1328, 1677
Eco81I	CCTNAGG	2 cut(s)	142, 351
Eco91I	GGTNACC	1 cut(s)	5
EcoICRI	GAGCTC	1 cut(s)	217
EcoO109I	RGGNCCY	1 cut(s)	283
EcoO65I	GGTNACC	1 cut(s)	5
EcoRI	GAATTC	1 cut(s)	738
EcoRII	CCWGG	5 cut(s)	54, 150, 520, 883, 1558
EcoT14I	CCWWGG	1 cut(s)	120
EcoT22I	ATGCAT	3 cut(s)	810, 1105, 1354
EcoT38I	GRGCYC	2 cut(s)	38, 219
EgeI	GGCGCC	1 cut(s)	50
EheI	GGCGCC	1 cut(s)	50
ErhI	CCWWGG	1 cut(s)	120
FalI	AAGNNNNNCTT	2 cut(s)	1267, 1299
FauI	CCCGC	4 cut(s)	28, 45, 369, 1427
FauNDI	CATATG	1 cut(s)	270
FblI	GTMKAC	2 cut(s)	264, 1470
Fnu4HI	GCNGC	6 cut(s)	41, 138, 1371, 1374, 1622, 1728
FokI	GGATG	7 cut(s)	498, 502, 569, 1010, 1183, 1508, 1542
FriOI	GRGCYC	2 cut(s)	38, 219
Fsp4HI	GCNGC	6 cut(s)	41, 138, 1371, 1374, 1622, 1728
FspBI	CTAG	2 cut(s)	200, 896
GlaI	GCGC	2 cut(s)	50, 293
GluI	GCNGC	6 cut(s)	41, 138, 1371, 1374, 1622, 1728
GsaI	CCCAGC	1 cut(s)	254
GsuI	CTGGAG	1 cut(s)	1305
HaeII	RGCGCY	1 cut(s)	52
HaeIII	GGCC	5 cut(s)	412, 504, 909, 1186, 1624
HapII	CCGG	3 cut(s)	289, 401, 406
HgaI	GACGC	2 cut(s)	1100, 1397
HhaI	GCGC	2 cut(s)	51, 294
Hin1I	GRCGYC	2 cut(s)	49, 1139
Hin6I	GCGC	2 cut(s)	49, 292
HinP1I	GCGC	2 cut(s)	49, 292
HincII	GTYRAC	1 cut(s)	265
HindII	GTYRAC	1 cut(s)	265
HindIII	AAGCTT	1 cut(s)	1310
HpaII	CCGG	3 cut(s)	289, 401, 406
HphI	GGTGA	2 cut(s)	1043, 1411
Hpy166II	GTNNAC	3 cut(s)	265, 1471, 1701
Hpy188I	TCNGA	7 cut(s)	183, 221, 606, 1087, 1387, 1646, 1680
Hpy188III	TCNNGA	8 cut(s)	311, 542, 617, 816, 932, 1015, 1067, 1225
Hpy8I	GTNNAC	3 cut(s)	265, 1471, 1701
Hpy99I	CGWCG	3 cut(s)	266, 1244, 1266
HpyAV	CCTTC	4 cut(s)	494, 1052, 1622, 1794
HpyCH4III	ACNGT	3 cut(s)	197, 579, 1636
HpyCH4IV	ACGT	3 cut(s)	1115, 1139, 1242
HpyCH4V	TGCA	8 cut(s)	725, 808, 919, 1103, 1211, 1352, 1376, 1760
HpyF3I	CTNAG	4 cut(s)	106, 142, 351, 605
HpySE526I	ACGT	3 cut(s)	1115, 1139, 1242
Hsp92I	GRCGYC	2 cut(s)	49, 1139
HspAI	GCGC	2 cut(s)	49, 292
KasI	GGCGCC	1 cut(s)	48
KspI	CCGCGG	1 cut(s)	41
Kzo9I	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
LguI	GCTCTTC	1 cut(s)	162
LmnI	GCTCC	4 cut(s)	33, 214, 548, 1210
Lsp1109I	GCAGC	3 cut(s)	1357, 1360, 1739
LweI	GCATC	7 cut(s)	32, 795, 1090, 1245, 1545, 1564, 1739
MaeI	CTAG	2 cut(s)	200, 896
MaeII	ACGT	3 cut(s)	1115, 1139, 1242
MaeIII	GTNAC	5 cut(s)	5, 708, 873, 1528, 1580
MalI	GATC	6 cut(s)	180, 374, 827, 870, 951, 1611
MbiI	CCGCTC	1 cut(s)	364
MboI	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
MboII	GAAGA	9 cut(s)	67, 70, 88, 91, 103, 149, 647, 1134, 1287
MflI	RGATCY	1 cut(s)	949
MhlI	GDGCHC	2 cut(s)	38, 219
MlsI	TGGCCA	1 cut(s)	1186
MluCI	AATT	5 cut(s)	719, 738, 1058, 1070, 1157
MluNI	TGGCCA	1 cut(s)	1186
Mly113I	GGCGCC	1 cut(s)	49
MlyI	GAGTC	4 cut(s)	122, 316, 1476, 1643
Mox20I	TGGCCA	1 cut(s)	1186
Mph1103I	ATGCAT	3 cut(s)	810, 1105, 1354
MroXI	GAANNNNTTC	1 cut(s)	1749
MscI	TGGCCA	1 cut(s)	1186
MseI	TTAA	1 cut(s)	1118
MslI	CAYNNNNRTG	4 cut(s)	1223, 1241, 1264, 1343
Msp20I	TGGCCA	1 cut(s)	1186
MspA1I	CMGCKG	3 cut(s)	40, 1010, 1325
MspI	CCGG	3 cut(s)	289, 401, 406
MspR9I	CCNGG	6 cut(s)	56, 152, 289, 522, 885, 1560
Mva1269I	GAATGC	1 cut(s)	1354
MvaI	CCWGG	5 cut(s)	56, 152, 522, 885, 1560
MvnI	CGCG	1 cut(s)	40
NarI	GGCGCC	1 cut(s)	49
NciI	CCSGG	1 cut(s)	289
NdeI	CATATG	1 cut(s)	270
NdeII	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
NlaIV	GGNNCC	5 cut(s)	35, 50, 194, 285, 1633
NmeAIII	GCCGAG	1 cut(s)	47
NmuCI	GTSAC	2 cut(s)	5, 708
NsiI	ATGCAT	3 cut(s)	810, 1105, 1354
NspI	RCATGY	1 cut(s)	448
PagI	TCATGA	1 cut(s)	1224
PciSI	GCTCTTC	1 cut(s)	162
PctI	GAATGC	1 cut(s)	1354
PdmI	GAANNNNTTC	1 cut(s)	1749
PfeI	GAWTC	6 cut(s)	397, 698, 1034, 1082, 1174, 1541
PflMI	CCANNNNNTGG	1 cut(s)	432
PfoI	TCCNGGA	1 cut(s)	54
PkrI	GCNGC	6 cut(s)	42, 139, 1372, 1375, 1623, 1729
PleI	GAGTC	4 cut(s)	122, 315, 1475, 1643
PluTI	GGCGCC	1 cut(s)	52
PpsI	GAGTC	4 cut(s)	122, 315, 1475, 1643
PpuMI	RGGWCCY	1 cut(s)	283
PshAI	GACNNNNGTC	1 cut(s)	1455
PsiI	TTATAA	1 cut(s)	1550
Psp124BI	GAGCTC	1 cut(s)	219
Psp5II	RGGWCCY	1 cut(s)	283
Psp6I	CCWGG	5 cut(s)	54, 150, 520, 883, 1558
PspEI	GGTNACC	1 cut(s)	5
PspFI	CCCAGC	1 cut(s)	250
PspGI	CCWGG	5 cut(s)	54, 150, 520, 883, 1558
PspN4I	GGNNCC	5 cut(s)	35, 50, 194, 285, 1633
PspPI	GGNCC	7 cut(s)	58, 283, 403, 411, 503, 908, 1623
PspPPI	RGGWCCY	1 cut(s)	283
PsuI	RGATCY	1 cut(s)	949
PvuII	CAGCTG	2 cut(s)	1010, 1325
RsaI	GTAC	3 cut(s)	581, 1109, 1329
RsaNI	GTAC	3 cut(s)	580, 1108, 1328
RseI	CAYNNNNRTG	4 cut(s)	1223, 1241, 1264, 1343
Rsr2I	CGGWCCG	1 cut(s)	403
RsrII	CGGWCCG	1 cut(s)	403
SacI	GAGCTC	1 cut(s)	219
SacII	CCGCGG	1 cut(s)	41
SalI	GTCGAC	1 cut(s)	263
SapI	GCTCTTC	1 cut(s)	162
SaqAI	TTAA	1 cut(s)	1118
SatI	GCNGC	6 cut(s)	41, 138, 1371, 1374, 1622, 1728
Sau3AI	GATC	6 cut(s)	178, 372, 825, 868, 949, 1609
Sau96I	GGNCC	7 cut(s)	58, 283, 403, 411, 503, 908, 1623
SchI	GAGTC	4 cut(s)	122, 316, 1476, 1643
ScrFI	CCNGG	6 cut(s)	56, 152, 289, 522, 885, 1560
SduI	GDGCHC	2 cut(s)	38, 219
SfaNI	GCATC	7 cut(s)	32, 795, 1090, 1245, 1545, 1564, 1739
SfoI	GGCGCC	1 cut(s)	50
Sfr303I	CCGCGG	1 cut(s)	41
SgrBI	CCGCGG	1 cut(s)	41
SinI	GGWCC	3 cut(s)	58, 283, 403
SmiMI	CAYNNNNRTG	4 cut(s)	1223, 1241, 1264, 1343
Sse9I	AATT	5 cut(s)	719, 738, 1058, 1070, 1157
SspDI	GGCGCC	1 cut(s)	48
SspMI	CTAG	2 cut(s)	200, 896
SstI	GAGCTC	1 cut(s)	219
StyD4I	CCNGG	6 cut(s)	54, 150, 287, 520, 883, 1558
StyI	CCWWGG	1 cut(s)	120
TaaI	ACNGT	3 cut(s)	197, 579, 1636
TaiI	ACGT	3 cut(s)	1118, 1142, 1245
TaqI	TCGA	9 cut(s)	26, 167, 264, 564, 618, 817, 1239, 1539, 1612
TasI	AATT	5 cut(s)	719, 738, 1058, 1070, 1157
TatI	WGTACW	1 cut(s)	579
TauI	GCSGC	3 cut(s)	43, 140, 1624
TfiI	GAWTC	6 cut(s)	397, 698, 1034, 1082, 1174, 1541
Tru1I	TTAA	1 cut(s)	1118
Tru9I	TTAA	1 cut(s)	1118
TscAI	CASTG	2 cut(s)	50, 1383
TseFI	GTSAC	2 cut(s)	5, 708
TseI	GCWGC	3 cut(s)	1370, 1373, 1727
Tsp45I	GTSAC	2 cut(s)	5, 708
TspRI	CASTG	2 cut(s)	50, 1383
Van91I	CCANNNNNTGG	1 cut(s)	432
VpaK11BI	GGWCC	3 cut(s)	58, 283, 403
XapI	RAATTY	3 cut(s)	738, 1058, 1157
XceI	RCATGY	1 cut(s)	448
XcmI	CCANNNNNNNNNTGG	2 cut(s)	670, 1058
XmiI	GTMKAC	2 cut(s)	264, 1470
XmnI	GAANNNNTTC	1 cut(s)	1749
XspI	CTAG	2 cut(s)	200, 896
ZraI	GACGTC	1 cut(s)	1140
Zsp2I	ATGCAT	3 cut(s)	810, 1105, 1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.