MD01G1178500.v1.1

ceramide glucosyltransferase activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
27865798 .. 27869275
3478 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1178500.v1.1.491

Sequence Viewer

Length: 366 bp
ATGTTCTCTTTGATCTGTCTTGAAACGCTAAAGACATTCTTGACGATGATGATAATGGAGTTCAGGATTATGATTCACCCCGAACAACAAGGACGGATATGCTGTCTATGCCAACAAGGGGGTAAGGTGAGATATAGTTTTCGTCATGTCTTTATGGTAGCTTGTCATTTTCCAAGGACTTTTAATTGCTGCTGCATTGTTGAATACCTTAAGAATGATCAGAACTTGGATGTCGTCCTCGGAGAAGCCGTTGCGGTCGACGGGGCATCAGTGCATTCGTCTGACGTCGTTTATGCAGCCTTTGAGCTCCGCCTTCGTTCCTTGGTAGTTGTATCCTATCCGCACTGCCTTTTTCACCATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.96

Weight (kDa)

7.02

Isoelectric Point (pI)

34.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028626)

Species Orthologous Gene IDs
malus_domestica MD01G1178500.v1.1
pyrus_communis pycom09g07410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 288
AccI GTMKAC 1 cut(s) 258
AciI CCGC 3 cut(s) 254, 310, 341
AcyI GRCGYC 1 cut(s) 285
AfiI CCNNNNNNNGG 1 cut(s) 118
AflII CTTAAG 1 cut(s) 209
AgsI TTSAA 2 cut(s) 23, 203
AluBI AGCT 2 cut(s) 161, 307
AluI AGCT 2 cut(s) 161, 307
Alw21I GWGCWC 1 cut(s) 309
ApeKI GCWGC 3 cut(s) 189, 192, 296
AsuHPI GGTGA 3 cut(s) 68, 139, 347
BanII GRGCYC 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 309
BbvI GCAGC 3 cut(s) 176, 179, 308
BceAI ACGGC 1 cut(s) 233
BciVI GTATCC 1 cut(s) 343
BclI TGATCA 1 cut(s) 217
BfrI CTTAAG 1 cut(s) 209
BfuI GTATCC 1 cut(s) 343
BisI GCNGC 3 cut(s) 190, 193, 297
BlsI GCNGC 3 cut(s) 191, 194, 298
BmsI GCATC 1 cut(s) 275
BsaHI GRCGYC 1 cut(s) 285
BsaJI CCNNGG 3 cut(s) 173, 238, 321
BsaXI ACNNNNNCTCC 2 cut(s) 234, 264
Bsc4I CCNNNNNNNGG 1 cut(s) 118
BseDI CCNNGG 3 cut(s) 173, 238, 321
BseGI GGATG 1 cut(s) 235
BseLI CCNNNNNNNGG 1 cut(s) 118
BseXI GCAGC 3 cut(s) 176, 179, 308
Bsh1285I CGRYCG 1 cut(s) 258
BsiEI CGRYCG 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 309
BslI CCNNNNNNNGG 1 cut(s) 118
BsmI GAATGC 1 cut(s) 274
Bsp1286I GDGCHC 1 cut(s) 309
Bsp143I GATC 2 cut(s) 12, 217
BspACI CCGC 3 cut(s) 254, 310, 341
BspTI CTTAAG 1 cut(s) 209
BssECI CCNNGG 3 cut(s) 173, 238, 321
BssMI GATC 2 cut(s) 12, 217
BssNI GRCGYC 1 cut(s) 285
BssT1I CCWWGG 2 cut(s) 173, 321
BstACI GRCGYC 1 cut(s) 285
BstAFI CTTAAG 1 cut(s) 209
BstF5I GGATG 1 cut(s) 235
BstKTI GATC 2 cut(s) 15, 220
BstMBI GATC 2 cut(s) 12, 217
BstMCI CGRYCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 1 cut(s) 108
BstV1I GCAGC 3 cut(s) 176, 179, 308
BsuI GTATCC 1 cut(s) 343
BtsCI GGATG 1 cut(s) 235
BtsI GCAGTG 1 cut(s) 343
BtsIMutI CAGTG 2 cut(s) 276, 343
CviAII CATG 1 cut(s) 146
CviJI RGCY 4 cut(s) 161, 248, 299, 307
CviKI_1 RGCY 4 cut(s) 161, 248, 299, 307
DpnI GATC 2 cut(s) 14, 219
DpnII GATC 2 cut(s) 12, 217
EciI GGCGGA 1 cut(s) 299
Ecl136II GAGCTC 1 cut(s) 307
Eco130I CCWWGG 2 cut(s) 173, 321
Eco24I GRGCYC 1 cut(s) 309
Eco53kI GAGCTC 1 cut(s) 307
EcoICRI GAGCTC 1 cut(s) 307
EcoT14I CCWWGG 2 cut(s) 173, 321
EcoT38I GRGCYC 1 cut(s) 309
ErhI CCWWGG 2 cut(s) 173, 321
FaeI CATG 1 cut(s) 149
FaiI YATR 7 cut(s) 71, 100, 109, 135, 147, 155, 294
FalI AAGNNNNNCTT 2 cut(s) 23, 55
FatI CATG 1 cut(s) 145
FbaI TGATCA 1 cut(s) 217
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 3 cut(s) 190, 193, 297
FokI GGATG 1 cut(s) 242
FriOI GRGCYC 1 cut(s) 309
Fsp4HI GCNGC 3 cut(s) 190, 193, 297
GluI GCNGC 3 cut(s) 190, 193, 297
Hin1I GRCGYC 1 cut(s) 285
Hin1II CATG 1 cut(s) 149
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 1 cut(s) 73
HphI GGTGA 3 cut(s) 68, 139, 347
Hpy166II GTNNAC 1 cut(s) 259
Hpy188I TCNGA 4 cut(s) 222, 242, 283, 365
Hpy188III TCNNGA 3 cut(s) 20, 40, 64
Hpy8I GTNNAC 1 cut(s) 259
Hpy99I CGWCG 2 cut(s) 263, 290
HpyAV CCTTC 1 cut(s) 323
HpyCH4IV ACGT 1 cut(s) 285
HpyCH4V TGCA 3 cut(s) 195, 274, 296
HpyF10VI GCNNNNNNNGC 1 cut(s) 108
HpySE526I ACGT 1 cut(s) 285
Hsp92I GRCGYC 1 cut(s) 285
Hsp92II CATG 1 cut(s) 149
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 2 cut(s) 12, 217
LmnI GCTCC 1 cut(s) 312
LpnPI CCDG 1 cut(s) 49
Lsp1109I GCAGC 3 cut(s) 176, 179, 308
LweI GCATC 1 cut(s) 275
MaeII ACGT 1 cut(s) 285
MalI GATC 2 cut(s) 14, 219
MboI GATC 2 cut(s) 12, 217
MhlI GDGCHC 1 cut(s) 309
MluCI AATT 1 cut(s) 184
MnlI CCTC 1 cut(s) 248
MseI TTAA 2 cut(s) 183, 210
MspCI CTTAAG 1 cut(s) 209
Mva1269I GAATGC 1 cut(s) 274
MwoI GCNNNNNNNGC 1 cut(s) 108
NdeII GATC 2 cut(s) 12, 217
NlaIII CATG 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 1 cut(s) 274
PfeI GAWTC 1 cut(s) 73
PkrI GCNGC 3 cut(s) 191, 194, 298
Psp124BI GAGCTC 1 cut(s) 309
SacI GAGCTC 1 cut(s) 309
SalI GTCGAC 1 cut(s) 257
SaqAI TTAA 2 cut(s) 183, 210
SatI GCNGC 3 cut(s) 190, 193, 297
Sau3AI GATC 2 cut(s) 12, 217
SduI GDGCHC 1 cut(s) 309
SetI ASST 5 cut(s) 129, 163, 210, 288, 309
SfaNI GCATC 1 cut(s) 275
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 1 cut(s) 184
SsiI CCGC 3 cut(s) 254, 310, 341
SstI GAGCTC 1 cut(s) 309
StyI CCWWGG 2 cut(s) 173, 321
TaiI ACGT 1 cut(s) 288
TaqI TCGA 1 cut(s) 258
TasI AATT 1 cut(s) 184
TfiI GAWTC 1 cut(s) 73
Tru1I TTAA 2 cut(s) 183, 210
Tru9I TTAA 2 cut(s) 183, 210
TscAI CASTG 2 cut(s) 276, 350
TseI GCWGC 3 cut(s) 189, 192, 296
TspGWI ACGGA 1 cut(s) 109
TspRI CASTG 2 cut(s) 276, 350
Vha464I CTTAAG 1 cut(s) 209
XmiI GTMKAC 1 cut(s) 258
ZraI GACGTC 1 cut(s) 286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.