pycom09g07410

ceramide glucosyltransferase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
5604198 .. 5604404
207 bp
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UTR
Exon/CDS
Intron
pycom09g07410.1

Sequence Viewer

Length: 207 bp
ATGTTAATGAATCCAAACATGGGTTTTGGGGTGTTCTTGCTAGAAAAGCCAAAGACATTTTCGACGATGATGATAATGGAGTTCAGGATTATCATTCATCTCAAACAACAAGGACGGATATGCTGTCTATGCCAACAAGGGGGTAAGGTGAGATATAGTTTTCGTCATGTCTTTATAGGCAGCTTGGCATTTTCCAAGGACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

69

Amino Acids

7.92

Weight (kDa)

9.82

Isoelectric Point (pI)

21.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028626)

Species Orthologous Gene IDs
malus_domestica MD01G1178500.v1.1
pyrus_communis pycom09g07410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 2 cut(s) 20, 139
AjuI GAANNNNNNNTTGG 2 cut(s) 43, 75
AluBI AGCT 1 cut(s) 183
AluI AGCT 1 cut(s) 183
ApeKI GCWGC 1 cut(s) 180
AsuHPI GGTGA 1 cut(s) 160
BbvI GCAGC 1 cut(s) 192
BfaI CTAG 1 cut(s) 41
BisI GCNGC 1 cut(s) 181
BlsI GCNGC 1 cut(s) 182
BsaJI CCNNGG 1 cut(s) 195
Bsc4I CCNNNNNNNGG 2 cut(s) 20, 139
BseDI CCNNGG 1 cut(s) 195
BseLI CCNNNNNNNGG 2 cut(s) 20, 139
BseXI GCAGC 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 20, 139
BssECI CCNNGG 1 cut(s) 195
BssT1I CCWWGG 1 cut(s) 195
BstMWI GCNNNNNNNGC 2 cut(s) 46, 129
BstV1I GCAGC 1 cut(s) 192
CviAII CATG 2 cut(s) 19, 167
CviJI RGCY 2 cut(s) 49, 183
CviKI_1 RGCY 2 cut(s) 49, 183
Eco130I CCWWGG 1 cut(s) 195
EcoT14I CCWWGG 1 cut(s) 195
ErhI CCWWGG 1 cut(s) 195
FaeI CATG 2 cut(s) 22, 170
FaiI YATR 6 cut(s) 20, 121, 130, 156, 168, 176
FatI CATG 2 cut(s) 18, 166
Fnu4HI GCNGC 1 cut(s) 181
Fsp4HI GCNGC 1 cut(s) 181
FspBI CTAG 1 cut(s) 41
GluI GCNGC 1 cut(s) 181
Hin1II CATG 2 cut(s) 22, 170
HinfI GANTC 1 cut(s) 10
HphI GGTGA 1 cut(s) 160
Hpy188III TCNNGA 1 cut(s) 85
Hpy99I CGWCG 1 cut(s) 67
HpyF10VI GCNNNNNNNGC 2 cut(s) 46, 129
Hsp92II CATG 2 cut(s) 22, 170
LpnPI CCDG 1 cut(s) 70
Lsp1109I GCAGC 1 cut(s) 192
MaeI CTAG 1 cut(s) 41
MseI TTAA 2 cut(s) 5, 205
MwoI GCNNNNNNNGC 2 cut(s) 46, 129
NlaIII CATG 2 cut(s) 22, 170
PfeI GAWTC 1 cut(s) 10
PkrI GCNGC 1 cut(s) 182
SaqAI TTAA 2 cut(s) 5, 205
SatI GCNGC 1 cut(s) 181
SetI ASST 2 cut(s) 150, 185
SgeI CNNG 8 cut(s) 31, 49, 53, 97, 122, 149, 179, 196
SspMI CTAG 1 cut(s) 41
StyI CCWWGG 1 cut(s) 195
TaqI TCGA 1 cut(s) 62
TfiI GAWTC 1 cut(s) 10
Tru1I TTAA 2 cut(s) 5, 205
Tru9I TTAA 2 cut(s) 5, 205
TseI GCWGC 1 cut(s) 180
TspDTI ATGAA 2 cut(s) 23, 86
TspGWI ACGGA 1 cut(s) 130
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.