MD03G1150900.v1.1

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0028505
Physical Location & Seq
Forward (+)
16950694 .. 16960551
9858 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1150900.v1.1.491

Sequence Viewer

Length: 1977 bp
ATGCTATCTAGTAGTGTAGATGCCACACAGTTGAAGGATCCTCATTCACTTGAAGTTCATCCGAGAGGTGCCAATTCTCACACTGACCCATCACACATTCCCCCTTCAACAGTTCAGGTGCAGACTGATTCAAGGCATCCAGTTGAAAACAGTGCTAGAAAATTTTCAGAGAGAGAATCTCTCTCAGATTCTGATGGAATGCAAGTCAGTCAAATGCCACCCTCTTGTGTGGTAGCTTCGGATCAAGAAAGGGAGTGCTCCTCAGTTCCTACGCAAGTATTTAACAAGCCACAGCAACAGCAACAACAATTGCACTATTCAGAGTCATCACTTAGTATGCATGGAAATGCTGGTGGTACTTTTCACCCGTATTCAGGGACAAGGATCAATACTTCTGCATTGCCTGTCAAACAGCAACCTTTTGATGCACAACCAAGGCAAAGTCTACAACATCAAAGCATGGGTTCTGCTCAGTCAGGTGGGCAAGCACATGGAATGAACATCATTAGTATGTCCAAAATGGGGAGTCAAAATTCTATGAATGACCCTAGTAGACTGGAAGGTGGATCTTGTTCTCACTTGAACAATAATGCTACTTTAGAACAGAATCCCGGTCCTTGTAAATCGTCAAATAAAGAGCAGAGTTCCGATCCCTTGTCATCAATGGCATATGTCAAACAGGGATCGTTTAATCAGACTATTAGGCAGCAACACAACCCCTCATTGCCTGATTCACAGGGATTGCCTTCTGTTTCTGCTGCACTACTTGAACAGGGAAATGCATCATCTGGAATTCCAATGAATGAAGTCTTAGAGAAGTCTTCTAGATTAGGCGCTTCAACATCTGTAAGCATTGCTCCTTCATCATCTAAAAGCACATTGCCCACAATTTCTGTTTCTCCTTCCCTCACGATGCAAGTCAATCCTAGTGTCTCGTTAGGCCCTCGGATAACATCTGGAACCTCTCCTTCTGGGGCTTGTAAGAAAACCCTTCCAAAAAAACGTTCTCTTGGCCAAAACAAGCCACTCGAAACACTTGGTTCATCACCATCGCAATCAAGTAAGAAGCAAAAAGTATCTGGGACCTTTGTTGATATAGCAGAACTGAATGATGTCACTTCTGTCAGTGGAGTCAATCTCGAGGAAGAGGAAGAGCTGCTATTTTCAGGGCCCAAGAAGCATAGTAAAGCTTCAGAAGCCTCTCGAAAATTTGTGCAAGAAGAAGAGGAAAGGCTGATTTTGCAGAAGGCTCCATTGCAGAAAAAGATAGGGGAAATCATGGTCAAATGCGGTTTGAAAAGTGTACGACACGATGTAGAGCGATGCTTGTCAATGTGTGTTGAAGAAAGGATGAGGAGGCTTATAAATACTTTGATCCTACTGTCAAGGCAGTGGGTTGATGCTGAAAAGTCAAGACACCACACTATTACTACCTCTGATGTTCGGCAACAAATTATTGATCTCAATCGGAAGCCTAGAGAAGAACGTAAAAAGAAGCGGGCTGAGGCAGAAAAGCTCTGGAAGCTTAATGAAACAAACAAAAAGGACAATGACAAAATGAGGACAGCAGCAGCAGCAAATGTTGCTGCCCTTGCGGCCGTTGGGGGAGATGACATGTTCTCAAAATGGAAACTTATGGCACAAGCACGGAAACAACGTGATGGTGAGATTGATGCAGCATCTAGATCCCAGCCAGTTCAAGGTGTAAACCGCACACCTACATCTACAGCTGGAAGAATTATGGAGAGTGAAGAAGCAGAGAAAAAGGGTGTTGCTGCTCCTGTTGCTGCAGCTGCTACTTCCAGAAAAGCCGGAAGTAACCAAGTTACCACGACTCAGACAAGGATGGCTCGTAGTATATCAGTCAAGGATATGATTGTTGTCTTGGAAAGGGAACCTCAGATGTCGAAGTCCACTCTGCTGTATCGGTTGCATGAGAGAATCCAATCCGACACTGCTATCGCTTCGTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0001650 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005730 GO:0005911 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0030054 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051059 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901796 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05016 ko05168 map03022 map05016 map05168
Pfam Domains
Protein Families
RST TAF4

Protein Analysis

659

Amino Acids

71.54

Weight (kDa)

9.32

Isoelectric Point (pI)

58.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF4 PF05236 369 - 644 1.5e-63 Transcription initiation factor TFIID component TAF4 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0028505)

Species Orthologous Gene IDs
malus_domestica MD03G1150900.v1.1
pyrus_communis pycom03g10540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1364
AccB1I GGYRCC 1 cut(s) 68
AccI GTMKAC 2 cut(s) 445, 553
AciI CCGC 4 cut(s) 1290, 1498, 1595, 1711
AclI AACGTT 1 cut(s) 1003
AclWI GGATC 9 cut(s) 32, 45, 249, 392, 574, 644, 691, 1369, 1680
AcoI YGGCCR 2 cut(s) 1012, 1596
AcsI RAATTY 4 cut(s) 161, 532, 792, 1208
AcuI CTGAAG 1 cut(s) 1176
AfaI GTAC 2 cut(s) 358, 1305
AfiI CCNNNNNNNGG 3 cut(s) 374, 522, 1700
AflIII ACRYGT 1 cut(s) 1614
AjuI GAANNNNNNNTTGG 2 cut(s) 988, 1020
AluBI AGCT 7 cut(s) 236, 1156, 1190, 1516, 1525, 1730, 1793
AluI AGCT 7 cut(s) 236, 1156, 1190, 1516, 1525, 1730, 1793
Alw21I GWGCWC 1 cut(s) 260
Alw26I GTCTC 1 cut(s) 937
AlwI GGATC 9 cut(s) 32, 45, 249, 392, 574, 644, 691, 1369, 1680
AlwNI CAGNNNCTG 1 cut(s) 191
Ama87I CYCGRG 1 cut(s) 1139
AoxI GGCC 4 cut(s) 940, 1012, 1169, 1596
ApaI GGGCCC 1 cut(s) 1173
ApoI RAATTY 4 cut(s) 161, 532, 792, 1208
Asp700I GAANNNNTTC 1 cut(s) 163
AspLEI GCGC 1 cut(s) 836
AspS9I GGNCC 5 cut(s) 614, 941, 1083, 1169, 1170
AsuC2I CCSGG 1 cut(s) 612
AsuHPI GGTGA 3 cut(s) 356, 1038, 1676
AvaI CYCGRG 1 cut(s) 1139
AvaII GGWCC 2 cut(s) 614, 1083
BaeGI GKGCMC 1 cut(s) 1173
BalI TGGCCA 1 cut(s) 1014
BamHI GGATCC 1 cut(s) 37
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 1 cut(s) 1173
BbsI GAAGAC 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 260
BbvCI CCTCAGC 1 cut(s) 1503
BccI CCATC 5 cut(s) 97, 188, 1057, 1655, 1840
BceAI ACGGC 1 cut(s) 1583
BcnI CCSGG 1 cut(s) 612
BcoDI GTCTC 1 cut(s) 937
BfaI CTAG 7 cut(s) 9, 156, 549, 825, 927, 1476, 1683
BfmI CTRYAG 2 cut(s) 1725, 1788
BfoI RGCGCY 1 cut(s) 837
BglI GCCNNNNNGGC 1 cut(s) 1595
Bme1390I CCNGG 1 cut(s) 612
Bme18I GGWCC 2 cut(s) 614, 1083
BmeT110I CYCGRG 1 cut(s) 1139
BmgT120I GGNCC 5 cut(s) 614, 941, 1083, 1169, 1170
BmiI GGNNCC 7 cut(s) 39, 70, 961, 1084, 1171, 1251, 1896
BmrFI CCNGG 1 cut(s) 612
BmsI GCATC 9 cut(s) 10, 145, 415, 791, 903, 1313, 1390, 1663, 1688
BpiI GAAGAC 1 cut(s) 813
BplI GAGNNNNNCTC 8 cut(s) 163, 195, 165, 197, 245, 277, 1122, 1154
Bpu10I CCTNAGC 1 cut(s) 1503
BpuMI CCSGG 1 cut(s) 612
BsaBI GATNNNNATC 1 cut(s) 1464
BsaJI CCNNGG 2 cut(s) 434, 944
Bsc4I CCNNNNNNNGG 3 cut(s) 374, 522, 1700
Bse1I ACTGG 3 cut(s) 140, 561, 1694
Bse3DI GCAATG 5 cut(s) 398, 722, 852, 878, 1253
Bse8I GATNNNNATC 1 cut(s) 1464
BseDI CCNNGG 2 cut(s) 434, 944
BseGI GGATG 4 cut(s) 58, 136, 1356, 1851
BseJI GATNNNNATC 1 cut(s) 1464
BseLI CCNNNNNNNGG 3 cut(s) 374, 522, 1700
BseMI GCAATG 5 cut(s) 398, 722, 852, 878, 1253
BseMII CTCAG 6 cut(s) 198, 276, 485, 1494, 1850, 1913
BseNI ACTGG 3 cut(s) 140, 561, 1694
BseRI GAGGAG 2 cut(s) 250, 1369
BseSI GKGCMC 1 cut(s) 1173
BseX3I CGGCCG 1 cut(s) 1596
BseYI CCCAGC 1 cut(s) 1689
BsgI GTGCAG 2 cut(s) 140, 744
Bsh1285I CGRYCG 1 cut(s) 1599
BshFI GGCC 4 cut(s) 942, 1014, 1171, 1598
BshNI GGYRCC 1 cut(s) 68
BsiEI CGRYCG 1 cut(s) 1599
BsiHKAI GWGCWC 1 cut(s) 260
BsiHKCI CYCGRG 1 cut(s) 1139
BsiSI CCGG 2 cut(s) 612, 1812
BslFI GGGAC 2 cut(s) 391, 1096
BslI CCNNNNNNNGG 3 cut(s) 374, 522, 1700
BsmAI GTCTC 1 cut(s) 937
BsmFI GGGAC 2 cut(s) 391, 1096
BsmI GAATGC 1 cut(s) 204
BsnI GGCC 4 cut(s) 942, 1014, 1171, 1598
BsoBI CYCGRG 1 cut(s) 1139
Bsp120I GGGCCC 1 cut(s) 1169
Bsp1286I GDGCHC 2 cut(s) 260, 1173
Bsp143I GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
BspACI CCGC 4 cut(s) 1290, 1498, 1595, 1711
BspANI GGCC 4 cut(s) 942, 1014, 1171, 1598
BspCNI CTCAG 6 cut(s) 197, 275, 484, 1495, 1849, 1912
BspLI GGNNCC 7 cut(s) 39, 70, 961, 1084, 1171, 1251, 1896
BspMAI CTGCAG 1 cut(s) 1792
BspPI GGATC 9 cut(s) 32, 45, 249, 392, 574, 644, 691, 1369, 1680
BspQI GCTCTTC 1 cut(s) 1146
BspT107I GGYRCC 1 cut(s) 68
BsrDI GCAATG 5 cut(s) 398, 722, 852, 878, 1253
BsrI ACTGG 3 cut(s) 140, 561, 1694
BssECI CCNNGG 2 cut(s) 434, 944
BssMI GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
BssT1I CCWWGG 1 cut(s) 434
Bst4CI ACNGT 4 cut(s) 30, 112, 152, 1383
Bst6I CTCTTC 3 cut(s) 1140, 1146, 1218
BstAPI GCANNNNNTGC 1 cut(s) 1583
BstC8I GCNNGC 2 cut(s) 486, 1500
BstDEI CTNAG 8 cut(s) 184, 262, 332, 471, 811, 1503, 1836, 1899
BstF5I GGATG 4 cut(s) 58, 136, 1356, 1851
BstH2I RGCGCY 1 cut(s) 837
BstHHI GCGC 1 cut(s) 836
BstKTI GATC 9 cut(s) 40, 244, 387, 569, 652, 686, 1377, 1462, 1688
BstMAI GTCTC 1 cut(s) 937
BstMBI GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
BstMCI CGRYCG 1 cut(s) 1599
BstNSI RCATGY 1 cut(s) 1618
BstSCI CCNGG 1 cut(s) 610
BstSFI CTRYAG 2 cut(s) 1725, 1788
BstSLI GKGCMC 1 cut(s) 1173
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 3 cut(s) 37, 566, 1685
BstYI RGATCY 3 cut(s) 37, 566, 1685
BstZI CGGCCG 1 cut(s) 1596
BsuRI GGCC 4 cut(s) 942, 1014, 1171, 1598
BtgZI GCGATG 2 cut(s) 1035, 1336
BtsCI GGATG 4 cut(s) 58, 136, 1356, 1851
BtsI GCAGTG 2 cut(s) 1397, 1953
BtsIMutI CAGTG 5 cut(s) 81, 157, 1132, 1397, 1953
Cac8I GCNNGC 2 cut(s) 486, 1500
CaiI CAGNNNCTG 1 cut(s) 191
CfoI GCGC 1 cut(s) 836
Cfr13I GGNCC 5 cut(s) 614, 941, 1083, 1169, 1170
Csp6I GTAC 2 cut(s) 357, 1304
CviAII CATG 6 cut(s) 341, 460, 491, 1279, 1615, 1934
CviQI GTAC 2 cut(s) 357, 1304
DdeI CTNAG 8 cut(s) 184, 262, 332, 471, 811, 1503, 1836, 1899
DpnI GATC 9 cut(s) 39, 243, 386, 568, 651, 685, 1376, 1461, 1687
DpnII GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
EaeI YGGCCR 2 cut(s) 1012, 1596
EagI CGGCCG 1 cut(s) 1596
Eam1104I CTCTTC 3 cut(s) 1140, 1146, 1218
EarI CTCTTC 3 cut(s) 1140, 1146, 1218
EclXI CGGCCG 1 cut(s) 1596
Eco130I CCWWGG 1 cut(s) 434
Eco24I GRGCYC 1 cut(s) 1173
Eco47I GGWCC 2 cut(s) 614, 1083
Eco52I CGGCCG 1 cut(s) 1596
Eco57I CTGAAG 1 cut(s) 1176
Eco88I CYCGRG 1 cut(s) 1139
EcoO109I RGGNCCY 3 cut(s) 941, 1083, 1169
EcoRI GAATTC 1 cut(s) 792
EcoT14I CCWWGG 1 cut(s) 434
EcoT22I ATGCAT 2 cut(s) 342, 784
EcoT38I GRGCYC 1 cut(s) 1173
ErhI CCWWGG 1 cut(s) 434
FaeI CATG 6 cut(s) 344, 463, 494, 1282, 1618, 1937
FaqI GGGAC 2 cut(s) 391, 1096
FatI CATG 6 cut(s) 340, 459, 490, 1278, 1614, 1933
FauI CCCGC 1 cut(s) 1491
FauNDI CATATG 1 cut(s) 670
FblI GTMKAC 2 cut(s) 445, 553
FokI GGATG 4 cut(s) 45, 123, 1363, 1858
FriOI GRGCYC 1 cut(s) 1173
FspBI CTAG 7 cut(s) 9, 156, 549, 825, 927, 1476, 1683
GlaI GCGC 1 cut(s) 835
GsaI CCCAGC 1 cut(s) 1693
HaeII RGCGCY 1 cut(s) 837
HaeIII GGCC 4 cut(s) 942, 1014, 1171, 1598
HapII CCGG 2 cut(s) 612, 1812
HhaI GCGC 1 cut(s) 836
Hin1II CATG 6 cut(s) 344, 463, 494, 1282, 1618, 1937
Hin6I GCGC 1 cut(s) 834
HinP1I GCGC 1 cut(s) 834
HindIII AAGCTT 2 cut(s) 1188, 1523
HpaII CCGG 2 cut(s) 612, 1812
HphI GGTGA 3 cut(s) 356, 1038, 1676
Hpy166II GTNNAC 5 cut(s) 446, 554, 1304, 1708, 1914
Hpy8I GTNNAC 5 cut(s) 446, 554, 1304, 1708, 1914
HpyAV CCTTC 9 cut(s) 28, 114, 554, 756, 870, 912, 978, 1001, 1240
HpyCH4III ACNGT 4 cut(s) 30, 112, 152, 1383
HpyCH4IV ACGT 3 cut(s) 1003, 1486, 1657
HpyF3I CTNAG 8 cut(s) 184, 262, 332, 471, 811, 1503, 1836, 1899
HpySE526I ACGT 3 cut(s) 1003, 1486, 1657
Hsp92II CATG 6 cut(s) 344, 463, 494, 1282, 1618, 1937
HspAI GCGC 1 cut(s) 834
Kzo9I GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
LguI GCTCTTC 1 cut(s) 1146
LmnI GCTCC 4 cut(s) 263, 862, 1255, 1783
LweI GCATC 9 cut(s) 10, 145, 415, 791, 903, 1313, 1390, 1663, 1688
MaeI CTAG 7 cut(s) 9, 156, 549, 825, 927, 1476, 1683
MaeII ACGT 3 cut(s) 1003, 1486, 1657
MaeIII GTNAC 3 cut(s) 1114, 1817, 1825
MalI GATC 9 cut(s) 39, 243, 386, 568, 651, 685, 1376, 1461, 1687
MboI GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
MboII GAAGA 9 cut(s) 813, 1157, 1163, 1232, 1235, 1355, 1493, 1746, 1763
MfeI CAATTG 1 cut(s) 308
MflI RGATCY 3 cut(s) 37, 566, 1685
MhlI GDGCHC 2 cut(s) 260, 1173
MlsI TGGCCA 1 cut(s) 1014
MluNI TGGCCA 1 cut(s) 1014
MlyI GAGTC 4 cut(s) 332, 535, 1140, 1828
MmeI TCCRAC 1 cut(s) 1974
Mox20I TGGCCA 1 cut(s) 1014
Mph1103I ATGCAT 2 cut(s) 342, 784
MroXI GAANNNNTTC 1 cut(s) 163
MscI TGGCCA 1 cut(s) 1014
MseI TTAA 3 cut(s) 282, 690, 1527
MslI CAYNNNNRTG 2 cut(s) 345, 509
Msp20I TGGCCA 1 cut(s) 1014
MspA1I CMGCKG 2 cut(s) 1730, 1793
MspI CCGG 2 cut(s) 612, 1812
MspR9I CCNGG 1 cut(s) 612
MunI CAATTG 1 cut(s) 308
Mva1269I GAATGC 1 cut(s) 204
NciI CCSGG 1 cut(s) 612
NdeI CATATG 1 cut(s) 670
NdeII GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
NlaIII CATG 6 cut(s) 344, 463, 494, 1282, 1618, 1937
NlaIV GGNNCC 7 cut(s) 39, 70, 961, 1084, 1171, 1251, 1896
NmuCI GTSAC 1 cut(s) 1114
NsiI ATGCAT 2 cut(s) 342, 784
NspI RCATGY 1 cut(s) 1618
PaeR7I CTCGAG 1 cut(s) 1139
PciI ACATGT 1 cut(s) 1614
PciSI GCTCTTC 1 cut(s) 1146
PcsI WCGNNNNNNNCGW 1 cut(s) 1654
PctI GAATGC 1 cut(s) 204
PdmI GAANNNNTTC 1 cut(s) 163
PfeI GAWTC 6 cut(s) 128, 176, 188, 607, 731, 1941
PleI GAGTC 4 cut(s) 331, 534, 1139, 1828
PpsI GAGTC 4 cut(s) 331, 534, 1139, 1828
PpuMI RGGWCCY 1 cut(s) 1083
PscI ACATGT 1 cut(s) 1614
PsiI TTATAA 1 cut(s) 1364
Psp1406I AACGTT 1 cut(s) 1003
Psp5II RGGWCCY 1 cut(s) 1083
PspFI CCCAGC 1 cut(s) 1689
PspN4I GGNNCC 7 cut(s) 39, 70, 961, 1084, 1171, 1251, 1896
PspOMI GGGCCC 1 cut(s) 1169
PspPI GGNCC 5 cut(s) 614, 941, 1083, 1169, 1170
PspPPI RGGWCCY 1 cut(s) 1083
PstI CTGCAG 1 cut(s) 1792
PstNI CAGNNNCTG 1 cut(s) 191
PsuI RGATCY 3 cut(s) 37, 566, 1685
PvuII CAGCTG 2 cut(s) 1730, 1793
RsaI GTAC 2 cut(s) 358, 1305
RsaNI GTAC 2 cut(s) 357, 1304
RseI CAYNNNNRTG 2 cut(s) 345, 509
SapI GCTCTTC 1 cut(s) 1146
SaqAI TTAA 3 cut(s) 282, 690, 1527
Sau3AI GATC 9 cut(s) 37, 241, 384, 566, 649, 683, 1374, 1459, 1685
Sau96I GGNCC 5 cut(s) 614, 941, 1083, 1169, 1170
SchI GAGTC 4 cut(s) 332, 535, 1140, 1828
ScrFI CCNGG 1 cut(s) 612
SduI GDGCHC 2 cut(s) 260, 1173
SfaNI GCATC 9 cut(s) 10, 145, 415, 791, 903, 1313, 1390, 1663, 1688
SfcI CTRYAG 2 cut(s) 1725, 1788
Sfr274I CTCGAG 1 cut(s) 1139
SinI GGWCC 2 cut(s) 614, 1083
SlaI CTCGAG 1 cut(s) 1139
SmiMI CAYNNNNRTG 2 cut(s) 345, 509
SmlI CTYRAG 1 cut(s) 1139
SmoI CTYRAG 1 cut(s) 1139
SsiI CCGC 4 cut(s) 1290, 1498, 1595, 1711
SspMI CTAG 7 cut(s) 9, 156, 549, 825, 927, 1476, 1683
StyD4I CCNGG 1 cut(s) 610
StyI CCWWGG 1 cut(s) 434
TaaI ACNGT 4 cut(s) 30, 112, 152, 1383
TaiI ACGT 3 cut(s) 1006, 1489, 1660
TaqI TCGA 4 cut(s) 1029, 1140, 1204, 1907
TauI GCSGC 1 cut(s) 1598
TfiI GAWTC 6 cut(s) 128, 176, 188, 607, 731, 1941
Tru1I TTAA 3 cut(s) 282, 690, 1527
Tru9I TTAA 3 cut(s) 282, 690, 1527
TscAI CASTG 5 cut(s) 88, 157, 1132, 1397, 1960
TseFI GTSAC 1 cut(s) 1114
Tsp45I GTSAC 1 cut(s) 1114
TspDTI ATGAA 8 cut(s) 47, 512, 554, 815, 819, 852, 1032, 1545
TspGWI ACGGA 1 cut(s) 1663
TspRI CASTG 5 cut(s) 88, 157, 1132, 1397, 1960
VpaK11BI GGWCC 2 cut(s) 614, 1083
XapI RAATTY 4 cut(s) 161, 532, 792, 1208
XbaI TCTAGA 2 cut(s) 824, 1682
XceI RCATGY 1 cut(s) 1618
XhoI CTCGAG 1 cut(s) 1139
XmiI GTMKAC 2 cut(s) 445, 553
XmnI GAANNNNTTC 1 cut(s) 163
XspI CTAG 7 cut(s) 9, 156, 549, 825, 927, 1476, 1683
Zsp2I ATGCAT 2 cut(s) 342, 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.