Transcription initiation factor
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1150900.v1.1 |
| pyrus_communis | pycom03g10540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1343 |
| AccB1I | GGYRCC | 1 cut(s) | 137 |
| AccI | GTMKAC | 2 cut(s) | 424, 532 |
| AciI | CCGC | 2 cut(s) | 1269, 1571 |
| AclI | AACGTT | 1 cut(s) | 982 |
| AclWI | GGATC | 6 cut(s) | 101, 114, 228, 553, 670, 1348 |
| AcoI | YGGCCR | 1 cut(s) | 991 |
| AcsI | RAATTY | 3 cut(s) | 511, 771, 1187 |
| AcuI | CTGAAG | 1 cut(s) | 1155 |
| AfaI | GTAC | 4 cut(s) | 39, 61, 337, 1284 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 353, 501, 1676 |
| AflIII | ACRYGT | 1 cut(s) | 1590 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 859, 891, 967, 999 |
| AluBI | AGCT | 5 cut(s) | 215, 1135, 1169, 1495, 1504 |
| AluI | AGCT | 5 cut(s) | 215, 1135, 1169, 1495, 1504 |
| Alw21I | GWGCWC | 1 cut(s) | 239 |
| Alw26I | GTCTC | 2 cut(s) | 49, 916 |
| AlwI | GGATC | 6 cut(s) | 101, 114, 228, 553, 670, 1348 |
| Ama87I | CYCGRG | 1 cut(s) | 1118 |
| AoxI | GGCC | 3 cut(s) | 919, 991, 1148 |
| ApaI | GGGCCC | 2 cut(s) | 923, 1152 |
| ApeKI | GCWGC | 7 cut(s) | 685, 737, 1487, 1547, 1550, 1562, 1652 |
| ApoI | RAATTY | 3 cut(s) | 511, 771, 1187 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1134 |
| AspA2I | CCTAGG | 1 cut(s) | 1454 |
| AspLEI | GCGC | 1 cut(s) | 815 |
| AspS9I | GGNCC | 5 cut(s) | 919, 920, 1062, 1148, 1149 |
| AsuHPI | GGTGA | 3 cut(s) | 335, 1017, 1652 |
| AvaI | CYCGRG | 1 cut(s) | 1118 |
| AvaII | GGWCC | 1 cut(s) | 1062 |
| AvrII | CCTAGG | 1 cut(s) | 1454 |
| AxyI | CCTNAGG | 1 cut(s) | 924 |
| BaeGI | GKGCMC | 2 cut(s) | 923, 1152 |
| BalI | TGGCCA | 1 cut(s) | 993 |
| BamHI | GGATCC | 1 cut(s) | 106 |
| BanI | GGYRCC | 1 cut(s) | 137 |
| BanII | GRGCYC | 4 cut(s) | 923, 958, 1152, 1666 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1122, 1154 |
| Bbv12I | GWGCWC | 1 cut(s) | 239 |
| BbvCI | CCTCAGC | 1 cut(s) | 1482 |
| BbvI | GCAGC | 7 cut(s) | 697, 724, 1499, 1549, 1559, 1562, 1664 |
| BccI | CCATC | 3 cut(s) | 166, 893, 1631 |
| BclI | TGATCA | 1 cut(s) | 670 |
| BcoDI | GTCTC | 2 cut(s) | 49, 916 |
| BfaI | CTAG | 6 cut(s) | 18, 528, 804, 906, 1455, 1659 |
| BfoI | RGCGCY | 1 cut(s) | 816 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1571 |
| BisI | GCNGC | 8 cut(s) | 686, 738, 1488, 1548, 1551, 1563, 1572, 1653 |
| BlnI | CCTAGG | 1 cut(s) | 1454 |
| BlsI | GCNGC | 8 cut(s) | 687, 739, 1489, 1549, 1552, 1564, 1573, 1654 |
| Bme18I | GGWCC | 1 cut(s) | 1062 |
| BmeT110I | CYCGRG | 1 cut(s) | 1118 |
| BmgT120I | GGNCC | 5 cut(s) | 919, 920, 1062, 1148, 1149 |
| BmiI | GGNNCC | 7 cut(s) | 108, 139, 921, 940, 1063, 1150, 1230 |
| BmrI | ACTGGG | 1 cut(s) | 725 |
| BmsI | GCATC | 9 cut(s) | 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664 |
| BmuI | ACTGGG | 1 cut(s) | 725 |
| BoxI | GACNNNNGTC | 1 cut(s) | 362 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 224, 256, 1101, 1133 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1482 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1443 |
| BsaI | GGTCTC | 1 cut(s) | 49 |
| BsaJI | CCNNGG | 3 cut(s) | 65, 413, 1454 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 353, 501, 1676 |
| Bse118I | RCCGGY | 1 cut(s) | 1477 |
| Bse1I | ACTGG | 5 cut(s) | 33, 209, 540, 720, 1670 |
| Bse21I | CCTNAGG | 1 cut(s) | 924 |
| Bse3DI | GCAATG | 5 cut(s) | 377, 701, 831, 857, 1232 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1443 |
| BseDI | CCNNGG | 3 cut(s) | 65, 413, 1454 |
| BseGI | GGATG | 4 cut(s) | 75, 127, 205, 1335 |
| BseJI | GATNNNNATC | 1 cut(s) | 1443 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 353, 501, 1676 |
| BseMI | GCAATG | 5 cut(s) | 377, 701, 831, 857, 1232 |
| BseMII | CTCAG | 5 cut(s) | 60, 255, 464, 938, 1473 |
| BseNI | ACTGG | 5 cut(s) | 33, 209, 540, 720, 1670 |
| BseRI | GAGGAG | 2 cut(s) | 229, 1348 |
| BseSI | GKGCMC | 2 cut(s) | 923, 1152 |
| BseXI | GCAGC | 7 cut(s) | 697, 724, 1499, 1549, 1559, 1562, 1664 |
| BseYI | CCCAGC | 1 cut(s) | 1665 |
| BsgI | GTGCAG | 3 cut(s) | 71, 209, 723 |
| BshFI | GGCC | 3 cut(s) | 921, 993, 1150 |
| BshNI | GGYRCC | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 239 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1118 |
| BsiSI | CCGG | 1 cut(s) | 1478 |
| BslFI | GGGAC | 2 cut(s) | 370, 1075 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 353, 501, 1676 |
| BsmAI | GTCTC | 2 cut(s) | 49, 916 |
| BsmFI | GGGAC | 2 cut(s) | 370, 1075 |
| BsnI | GGCC | 3 cut(s) | 921, 993, 1150 |
| Bso31I | GGTCTC | 1 cut(s) | 49 |
| BsoBI | CYCGRG | 1 cut(s) | 1118 |
| Bsp120I | GGGCCC | 2 cut(s) | 919, 1148 |
| Bsp1286I | GDGCHC | 5 cut(s) | 239, 923, 958, 1152, 1666 |
| Bsp1407I | TGTACA | 1 cut(s) | 37 |
| Bsp143I | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| BspACI | CCGC | 2 cut(s) | 1269, 1571 |
| BspANI | GGCC | 3 cut(s) | 921, 993, 1150 |
| BspCNI | CTCAG | 5 cut(s) | 59, 254, 463, 937, 1474 |
| BspHI | TCATGA | 1 cut(s) | 483 |
| BspLI | GGNNCC | 7 cut(s) | 108, 139, 921, 940, 1063, 1150, 1230 |
| BspPI | GGATC | 6 cut(s) | 101, 114, 228, 553, 670, 1348 |
| BspQI | GCTCTTC | 1 cut(s) | 1125 |
| BspT107I | GGYRCC | 1 cut(s) | 137 |
| BspTNI | GGTCTC | 1 cut(s) | 49 |
| BsrDI | GCAATG | 5 cut(s) | 377, 701, 831, 857, 1232 |
| BsrFI | RCCGGY | 1 cut(s) | 1477 |
| BsrGI | TGTACA | 1 cut(s) | 37 |
| BsrI | ACTGG | 5 cut(s) | 33, 209, 540, 720, 1670 |
| BssAI | RCCGGY | 1 cut(s) | 1477 |
| BssECI | CCNNGG | 3 cut(s) | 65, 413, 1454 |
| BssMI | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| BssT1I | CCWWGG | 3 cut(s) | 65, 413, 1454 |
| Bst4CI | ACNGT | 5 cut(s) | 37, 99, 181, 1029, 1362 |
| Bst6I | CTCTTC | 3 cut(s) | 1119, 1125, 1197 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1559 |
| BstAUI | TGTACA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 1479 |
| BstDEI | CTNAG | 6 cut(s) | 46, 241, 450, 790, 924, 1482 |
| BstF5I | GGATG | 4 cut(s) | 75, 127, 205, 1335 |
| BstH2I | RGCGCY | 1 cut(s) | 816 |
| BstHHI | GCGC | 1 cut(s) | 815 |
| BstKTI | GATC | 7 cut(s) | 109, 223, 548, 665, 673, 1356, 1441 |
| BstMAI | GTCTC | 2 cut(s) | 49, 916 |
| BstMBI | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661 |
| BstNSI | RCATGY | 1 cut(s) | 1594 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 362 |
| BstSLI | GKGCMC | 2 cut(s) | 923, 1152 |
| BstV1I | GCAGC | 7 cut(s) | 697, 724, 1499, 1549, 1559, 1562, 1664 |
| BstX2I | RGATCY | 2 cut(s) | 106, 545 |
| BstYI | RGATCY | 2 cut(s) | 106, 545 |
| Bsu36I | CCTNAGG | 1 cut(s) | 924 |
| BsuRI | GGCC | 3 cut(s) | 921, 993, 1150 |
| BtgZI | GCGATG | 1 cut(s) | 1315 |
| BtsCI | GGATG | 4 cut(s) | 75, 127, 205, 1335 |
| BtsI | GCAGTG | 1 cut(s) | 1376 |
| BtsIMutI | CAGTG | 6 cut(s) | 26, 54, 150, 713, 1111, 1376 |
| Cac8I | GCNNGC | 1 cut(s) | 1479 |
| CciI | TCATGA | 1 cut(s) | 483 |
| CfoI | GCGC | 1 cut(s) | 815 |
| Cfr10I | RCCGGY | 1 cut(s) | 1477 |
| Cfr13I | GGNCC | 5 cut(s) | 919, 920, 1062, 1148, 1149 |
| Csp6I | GTAC | 4 cut(s) | 38, 60, 336, 1283 |
| CviAII | CATG | 6 cut(s) | 320, 439, 470, 484, 1258, 1591 |
| CviQI | GTAC | 4 cut(s) | 38, 60, 336, 1283 |
| DdeI | CTNAG | 6 cut(s) | 46, 241, 450, 790, 924, 1482 |
| DpnI | GATC | 7 cut(s) | 108, 222, 547, 664, 672, 1355, 1440 |
| DpnII | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| EaeI | YGGCCR | 1 cut(s) | 991 |
| Eam1104I | CTCTTC | 3 cut(s) | 1119, 1125, 1197 |
| EarI | CTCTTC | 3 cut(s) | 1119, 1125, 1197 |
| Eco130I | CCWWGG | 3 cut(s) | 65, 413, 1454 |
| Eco24I | GRGCYC | 4 cut(s) | 923, 958, 1152, 1666 |
| Eco31I | GGTCTC | 1 cut(s) | 49 |
| Eco32I | GATATC | 1 cut(s) | 1075 |
| Eco47I | GGWCC | 1 cut(s) | 1062 |
| Eco57I | CTGAAG | 1 cut(s) | 1155 |
| Eco81I | CCTNAGG | 1 cut(s) | 924 |
| Eco88I | CYCGRG | 1 cut(s) | 1118 |
| EcoO109I | RGGNCCY | 3 cut(s) | 920, 1062, 1148 |
| EcoRI | GAATTC | 1 cut(s) | 771 |
| EcoRV | GATATC | 1 cut(s) | 1075 |
| EcoT14I | CCWWGG | 3 cut(s) | 65, 413, 1454 |
| EcoT22I | ATGCAT | 2 cut(s) | 321, 763 |
| EcoT38I | GRGCYC | 4 cut(s) | 923, 958, 1152, 1666 |
| ErhI | CCWWGG | 3 cut(s) | 65, 413, 1454 |
| FaeI | CATG | 6 cut(s) | 323, 442, 473, 487, 1261, 1594 |
| FaqI | GGGAC | 2 cut(s) | 370, 1075 |
| FatI | CATG | 6 cut(s) | 319, 438, 469, 483, 1257, 1590 |
| FauNDI | CATATG | 1 cut(s) | 649 |
| FbaI | TGATCA | 1 cut(s) | 670 |
| FblI | GTMKAC | 2 cut(s) | 424, 532 |
| Fnu4HI | GCNGC | 8 cut(s) | 686, 738, 1488, 1548, 1551, 1563, 1572, 1653 |
| FokI | GGATG | 4 cut(s) | 82, 114, 192, 1342 |
| FriOI | GRGCYC | 4 cut(s) | 923, 958, 1152, 1666 |
| Fsp4HI | GCNGC | 8 cut(s) | 686, 738, 1488, 1548, 1551, 1563, 1572, 1653 |
| FspBI | CTAG | 6 cut(s) | 18, 528, 804, 906, 1455, 1659 |
| GlaI | GCGC | 1 cut(s) | 814 |
| GluI | GCNGC | 8 cut(s) | 686, 738, 1488, 1548, 1551, 1563, 1572, 1653 |
| GsaI | CCCAGC | 1 cut(s) | 1669 |
| HaeII | RGCGCY | 1 cut(s) | 816 |
| HaeIII | GGCC | 3 cut(s) | 921, 993, 1150 |
| HapII | CCGG | 1 cut(s) | 1478 |
| HhaI | GCGC | 1 cut(s) | 815 |
| Hin1II | CATG | 6 cut(s) | 323, 442, 473, 487, 1261, 1594 |
| Hin6I | GCGC | 1 cut(s) | 813 |
| HinP1I | GCGC | 1 cut(s) | 813 |
| HindIII | AAGCTT | 2 cut(s) | 1167, 1502 |
| HinfI | GANTC | 7 cut(s) | 197, 302, 505, 586, 710, 1110, 1702 |
| HpaII | CCGG | 1 cut(s) | 1478 |
| HphI | GGTGA | 3 cut(s) | 335, 1017, 1652 |
| Hpy166II | GTNNAC | 3 cut(s) | 425, 533, 1283 |
| Hpy188I | TCNGA | 8 cut(s) | 132, 220, 301, 675, 1174, 1358, 1417, 1449 |
| Hpy8I | GTNNAC | 3 cut(s) | 425, 533, 1283 |
| Hpy99I | CGWCG | 1 cut(s) | 1033 |
| HpyCH4III | ACNGT | 5 cut(s) | 37, 99, 181, 1029, 1362 |
| HpyCH4IV | ACGT | 3 cut(s) | 58, 982, 1633 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661 |
| HpyF3I | CTNAG | 6 cut(s) | 46, 241, 450, 790, 924, 1482 |
| HpySE526I | ACGT | 3 cut(s) | 58, 982, 1633 |
| Hsp92II | CATG | 6 cut(s) | 323, 442, 473, 487, 1261, 1594 |
| HspAI | GCGC | 1 cut(s) | 813 |
| KroI | GCCGGC | 1 cut(s) | 1477 |
| KroNI | GCCGGC | 1 cut(s) | 1479 |
| Ksp22I | TGATCA | 1 cut(s) | 670 |
| Kzo9I | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| LguI | GCTCTTC | 1 cut(s) | 1125 |
| LmnI | GCTCC | 3 cut(s) | 242, 841, 1234 |
| Lsp1109I | GCAGC | 7 cut(s) | 697, 724, 1499, 1549, 1559, 1562, 1664 |
| LweI | GCATC | 9 cut(s) | 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664 |
| MaeI | CTAG | 6 cut(s) | 18, 528, 804, 906, 1455, 1659 |
| MaeII | ACGT | 3 cut(s) | 58, 982, 1633 |
| MaeIII | GTNAC | 3 cut(s) | 31, 928, 1093 |
| MalI | GATC | 7 cut(s) | 108, 222, 547, 664, 672, 1355, 1440 |
| MboI | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| MboII | GAAGA | 5 cut(s) | 1136, 1142, 1211, 1214, 1472 |
| MfeI | CAATTG | 1 cut(s) | 287 |
| MflI | RGATCY | 2 cut(s) | 106, 545 |
| MhlI | GDGCHC | 5 cut(s) | 239, 923, 958, 1152, 1666 |
| MlsI | TGGCCA | 1 cut(s) | 993 |
| MluCI | AATT | 9 cut(s) | 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697 |
| MluNI | TGGCCA | 1 cut(s) | 993 |
| MlyI | GAGTC | 3 cut(s) | 311, 514, 1119 |
| MmeI | TCCRAC | 1 cut(s) | 1381 |
| Mox20I | TGGCCA | 1 cut(s) | 993 |
| Mph1103I | ATGCAT | 2 cut(s) | 321, 763 |
| MroNI | GCCGGC | 1 cut(s) | 1477 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1134 |
| MscI | TGGCCA | 1 cut(s) | 993 |
| MseI | TTAA | 2 cut(s) | 261, 1506 |
| MslI | CAYNNNNRTG | 3 cut(s) | 324, 488, 890 |
| Msp20I | TGGCCA | 1 cut(s) | 993 |
| MspI | CCGG | 1 cut(s) | 1478 |
| MunI | CAATTG | 1 cut(s) | 287 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661 |
| NaeI | GCCGGC | 1 cut(s) | 1479 |
| NdeI | CATATG | 1 cut(s) | 649 |
| NdeII | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| NgoMIV | GCCGGC | 1 cut(s) | 1477 |
| NlaIII | CATG | 6 cut(s) | 323, 442, 473, 487, 1261, 1594 |
| NlaIV | GGNNCC | 7 cut(s) | 108, 139, 921, 940, 1063, 1150, 1230 |
| NmuCI | GTSAC | 1 cut(s) | 1093 |
| NsiI | ATGCAT | 2 cut(s) | 321, 763 |
| NspI | RCATGY | 1 cut(s) | 1594 |
| PaeR7I | CTCGAG | 1 cut(s) | 1118 |
| PagI | TCATGA | 1 cut(s) | 483 |
| PciI | ACATGT | 1 cut(s) | 1590 |
| PciSI | GCTCTTC | 1 cut(s) | 1125 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1630 |
| PdiI | GCCGGC | 1 cut(s) | 1479 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1134 |
| PfeI | GAWTC | 4 cut(s) | 197, 586, 710, 1702 |
| PkrI | GCNGC | 8 cut(s) | 687, 739, 1489, 1549, 1552, 1564, 1573, 1654 |
| PleI | GAGTC | 3 cut(s) | 310, 513, 1118 |
| PpsI | GAGTC | 3 cut(s) | 310, 513, 1118 |
| PpuMI | RGGWCCY | 1 cut(s) | 1062 |
| PscI | ACATGT | 1 cut(s) | 1590 |
| PshAI | GACNNNNGTC | 1 cut(s) | 362 |
| PsiI | TTATAA | 1 cut(s) | 1343 |
| Psp1406I | AACGTT | 1 cut(s) | 982 |
| Psp5II | RGGWCCY | 1 cut(s) | 1062 |
| PspFI | CCCAGC | 1 cut(s) | 1665 |
| PspN4I | GGNNCC | 7 cut(s) | 108, 139, 921, 940, 1063, 1150, 1230 |
| PspOMI | GGGCCC | 2 cut(s) | 919, 1148 |
| PspPI | GGNCC | 5 cut(s) | 919, 920, 1062, 1148, 1149 |
| PspPPI | RGGWCCY | 1 cut(s) | 1062 |
| PsuI | RGATCY | 2 cut(s) | 106, 545 |
| RsaI | GTAC | 4 cut(s) | 39, 61, 337, 1284 |
| RsaNI | GTAC | 4 cut(s) | 38, 60, 336, 1283 |
| RseI | CAYNNNNRTG | 3 cut(s) | 324, 488, 890 |
| SapI | GCTCTTC | 1 cut(s) | 1125 |
| SaqAI | TTAA | 2 cut(s) | 261, 1506 |
| SatI | GCNGC | 8 cut(s) | 686, 738, 1488, 1548, 1551, 1563, 1572, 1653 |
| Sau3AI | GATC | 7 cut(s) | 106, 220, 545, 662, 670, 1353, 1438 |
| Sau96I | GGNCC | 5 cut(s) | 919, 920, 1062, 1148, 1149 |
| SchI | GAGTC | 3 cut(s) | 311, 514, 1119 |
| SduI | GDGCHC | 5 cut(s) | 239, 923, 958, 1152, 1666 |
| SfaNI | GCATC | 9 cut(s) | 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664 |
| Sfr274I | CTCGAG | 1 cut(s) | 1118 |
| SinI | GGWCC | 1 cut(s) | 1062 |
| SlaI | CTCGAG | 1 cut(s) | 1118 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 324, 488, 890 |
| SmlI | CTYRAG | 1 cut(s) | 1118 |
| SmoI | CTYRAG | 1 cut(s) | 1118 |
| Sse9I | AATT | 9 cut(s) | 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697 |
| SsiI | CCGC | 2 cut(s) | 1269, 1571 |
| SspMI | CTAG | 6 cut(s) | 18, 528, 804, 906, 1455, 1659 |
| StyI | CCWWGG | 3 cut(s) | 65, 413, 1454 |
| TaaI | ACNGT | 5 cut(s) | 37, 99, 181, 1029, 1362 |
| TaiI | ACGT | 3 cut(s) | 61, 985, 1636 |
| TaqI | TCGA | 2 cut(s) | 1008, 1119 |
| TasI | AATT | 9 cut(s) | 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TauI | GCSGC | 1 cut(s) | 1574 |
| TfiI | GAWTC | 4 cut(s) | 197, 586, 710, 1702 |
| Tru1I | TTAA | 2 cut(s) | 261, 1506 |
| Tru9I | TTAA | 2 cut(s) | 261, 1506 |
| TscAI | CASTG | 6 cut(s) | 33, 54, 157, 720, 1111, 1376 |
| TseFI | GTSAC | 1 cut(s) | 1093 |
| TseI | GCWGC | 7 cut(s) | 685, 737, 1487, 1547, 1550, 1562, 1652 |
| Tsp45I | GTSAC | 1 cut(s) | 1093 |
| TspDTI | ATGAA | 9 cut(s) | 17, 116, 491, 533, 794, 798, 831, 1011, 1524 |
| TspGWI | ACGGA | 2 cut(s) | 1480, 1639 |
| TspRI | CASTG | 6 cut(s) | 33, 54, 157, 720, 1111, 1376 |
| VpaK11BI | GGWCC | 1 cut(s) | 1062 |
| XapI | RAATTY | 3 cut(s) | 511, 771, 1187 |
| XbaI | TCTAGA | 2 cut(s) | 803, 1658 |
| XceI | RCATGY | 1 cut(s) | 1594 |
| XhoI | CTCGAG | 1 cut(s) | 1118 |
| XmaJI | CCTAGG | 1 cut(s) | 1454 |
| XmiI | GTMKAC | 2 cut(s) | 424, 532 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1134 |
| XspI | CTAG | 6 cut(s) | 18, 528, 804, 906, 1455, 1659 |
| Zsp2I | ATGCAT | 2 cut(s) | 321, 763 |