Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0017174

Physical Location & Seq

Genomic Coordinates Forward (+)

31407377 .. 31412370

Gene Structure 4994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1228500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2487 bp

ATGTCCGCAAACACCACCACCCGCACAACCCCGACCAAAACCCCGTCGGGAAAATCATCCCGCTCCCGGAAACATTCTCACCCCGATTCCACCGCCGAGAGCGAAATGTCGTCTTCGTCGTTGGCCTCCCTCGCCAACTCCAAGTCCCGATTCGAGGCCTACAATCGCCTCCAGGCGGCCACGGTGGCATTCGGAGAGAAACTCCCGATTCCAGAGATCGTTGCCCTCGGCGGACAGTCGGACGGCAAGAGCTCTCTCCTCGAAGCACTCCTCGGGTTTCGCTTCAATGTCCGGGAAGTCGAGATGGGCACTCGCCGTCCTCTCATTCTCCAAATGGTCCACGACCCCACCGCACTCGAGCCCCGCTGCCGATTCCAGGAAGAGGATACTGAAGAATATGGAAGCCCAGTCGTTTTGCCATCGGCCATTGCAGACATCATTAAGTCCCGCACTGAGACACTGTTGAAGAAAACTAAAGGTGCAGTTTCTTCAAAGCCAATTGTCATGAGAGCAGAATACGCACACTGCCCGAACCTCACCATTATAGATACTCCGGGCTTTGTTCTTAAGGCAAAGAAAGGAGAACCTGAAAGAACTCCTGATGAAATTCTTTCCATGGTGAAGTCACTGGCTAGTCCTCCACATCGTATACTCTTGTTTCTCCAACAAAGTAGTGTGGAGTGGTGCTCCTCGTTGTGGTTGGACGCCATTCGGGATATTGATCCGACCTTTCGAAGGACGATTATCGTGGTCTCGAAGTTTGATAATCGGTTAAAGGAGTTTAGTGACCGGTGGGAGGTGGACCGCTATTTGAGTGCAAGTGGTTATCTTGGCGATAACACTCATCCATTTTTTGTTGCACTGCCAAAGGATAGGAATACTATTTCAAATGATGAATTTCGCCGGCAGATAGCTCAAGTAGATTGTGAAGTTTTACGACACCTTCGTGAGGGTGTTAAGGGAGGCTTTGATGAAGAGAAGTTCAGACCATATATTGGATTTAGCTGTTTGAGAGACTATTTAGAATCCGAGCTTCAGAAAAGGTACAAAGAAGCCGCACCAGCAACTCTTGCTTTGCTTGAGCAGCGCTGCAGTGATGTCACCTGTGAACTAGCCAAAGTGGACTCAAAAATACAGGCCACCTCTGATGTTGCTCAGCTCAGGAGATCTGCAATGTTGTATGCAGCTTCTATAAGCAATCATGTGGCTACTTTGATTGATGGAGCAGCAGACCCTGCCCCTGAGCAATGGGGGAAAACAACTATGGAGGAGCAATCGGAAAGTGGTATTGGGGGATGGCCTGGCATCACAGCAGATATAATGCCTCCCAATGCTACCCTTCGACTTTATGGAGGAGCTGCATTTGAAAGGGTTATGCATGAATTTCACTGTGCGGCATATTCAATTGAATGTCCTCCAGTGTCTAGGGAGAAGGTGGCAAATATCCTACTTGCCCATGCTAGCCGAGGAGGGGGTAGAGCAGTGATGGATGCAGCTGCAGAGATTGCACGTTCTGCTGCACGCTCATGGCTTGCTCCTCTTCTTGACTCTGCATGCGATCGGCTTGCATTTGTTTTGGGAAATCTTTTTGATCTTGCCATAGAACGAACTCACAACCGTGATTCAGAATGTGGGAGGAAATCTGGAAATATGGATGGATATATTGGTTTCCATGCTGCTCTTAGGCAGGCACACAACCGATTTATAAAGGAGCTTGCTAAACAGTGCAAGCAACTAGTTCGGCACCACCTCGATTCAGTTACAAGTCCATACTCTTTGGTTTGTTATGGCAATGACTTTCAAAGCGGTTTTGGCTCCAGTACAGCCTCTTCTTATAACTTTAACCAGCCTTCAGTCACATCATTTTTACTTGAGTTATCTGATGCCACGATGAAAGATCAGGAGAATATACCTCCAGAAAAGAATGCACAACAAACTACTCCTGGAAAAGGTACAGATGCCAGAGATGCTCTTCGAGAAAGCCAAATGACGGTGCCTGAGACCCCATCACCTGATCAGCCATGTGATGGTGGCTTGAAGAAGGATCTTGGGAATGGCATTGACATAGGAGCAAGAAAGCGGATTTCAAGAATGCCTGGAAATAACAGAAATTCTGACAATACAAGAACACAACAAAATGGTGGTTCCCTTTTGTTTGGAAATGTTGATGGCACTTTAAAATCAACCACAGCTTATACAGAAATCTGTTCATCAGCTGCACAGCATTTCGGGCGGATACGTGAAGTTCTTGTGGAGAGAAATGTGGCATCAGCTTTGAATTCTGGTTTCCTAACACCTTGTCGGGATCGGCTTGTTCTGGCTATTGGTTTGGATTTGTTCGCTGTGAGCGATGAGAAGTTCATGGACATGTTTGTCGTACCTGGCGCAATTGATGTACTGCAGAATGAGCGACAATCGCTTCAGAAGCGTCAAAAGACACTCCAGTCTTGTTTGAACGAGTTTAAAACTCTTGCTCGCGCACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009504 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0022402 GO:0032506 GO:0044424 GO:0044444 GO:0044464 GO:0048285 GO:0051301 GO:0061640 GO:0071840 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dynamin_N

Protein Analysis

829

Amino Acids

91.34

Weight (kDa)

7.23

Isoelectric Point (pI)

51.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	73 - 253	2e-34	Dynamin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017174)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53140
fragaria_vesca	FvH4_3g19810
malus_domestica	MD03G1228500.v1.1
prunus_persica	Prupe.4G180200_v2.0.a1
pyrus_communis	pycom03g17660
rosa_chinensis	RchiOBHm_Chr5g0033231
rosa_laevigata	RLG00000033459
rosa_multiflora	Rmu_ssc0000299.1_g000012
rosa_roxburghii	Rroxscaffold_1G00046760
rosa_rugosa	Rorug05G0138000
rosa_samantha	Rh5AG229800 Rh5BG230600
rosa_wichuraiana	Rw5G021000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1706, 1836
AasI	GACNNNNNNGTC	2 cut(s)	2372, 2443
AccB1I	GGYRCC	2 cut(s)	1743, 1993
AccB7I	CCANNNNNTGG	2 cut(s)	995, 2027
AccBSI	CCGCTC	1 cut(s)	63
AccI	GTMKAC	1 cut(s)	649
AccII	CGCG	1 cut(s)	2478
AclWI	GGATC	3 cut(s)	716, 2052, 2313
AcoI	YGGCCR	2 cut(s)	177, 423
AcsI	RAATTY	5 cut(s)	606, 896, 1382, 2110, 2278
AcuI	CTGAAG	4 cut(s)	411, 1019, 1836, 2405
AcyI	GRCGYC	1 cut(s)	705
AfaI	GTAC	5 cut(s)	1046, 1822, 1954, 2379, 2397
AfeI	AGCGCT	1 cut(s)	1088
AflII	CTTAAG	1 cut(s)	566
AflIII	ACRYGT	1 cut(s)	2367
AgeI	ACCGGT	1 cut(s)	789
AhlI	ACTAGT	1 cut(s)	1735
AjnI	CCWGG	6 cut(s)	171, 375, 1300, 1942, 2095, 2380
AjuI	GAANNNNNNNTTGG	4 cut(s)	134, 166, 1272, 1304
AleI	CACNNNNGTG	2 cut(s)	945, 1617
Alw21I	GWGCWC	2 cut(s)	254, 689
Alw26I	GTCTC	4 cut(s)	449, 757, 1008, 1994
AlwI	GGATC	3 cut(s)	716, 2052, 2313
AlwNI	CAGNNNCTG	1 cut(s)	1235
Ama87I	CYCGRG	2 cut(s)	272, 356
Aor51HI	AGCGCT	1 cut(s)	1088
AoxI	GGCC	6 cut(s)	123, 156, 177, 423, 1137, 1298
ApoI	RAATTY	5 cut(s)	606, 896, 1382, 2110, 2278
AsiGI	ACCGGT	1 cut(s)	789
AspLEI	GCGC	3 cut(s)	1089, 2387, 2480
AspS9I	GGNCC	2 cut(s)	337, 802
AsuC2I	CCSGG	3 cut(s)	67, 293, 555
AsuHPI	GGTGA	5 cut(s)	71, 529, 631, 1093, 2001
AsuII	TTCGAA	1 cut(s)	733
AsuNHI	GCTAGC	1 cut(s)	1460
AvaI	CYCGRG	2 cut(s)	272, 356
AvaII	GGWCC	2 cut(s)	337, 802
BaeGI	GKGCMC	1 cut(s)	311
BanI	GGYRCC	2 cut(s)	1743, 1993
BanII	GRGCYC	2 cut(s)	254, 363
BarI	GAAGNNNNNNTAC	2 cut(s)	1813, 1845
BbsI	GAAGAC	1 cut(s)	105
Bbv12I	GWGCWC	2 cut(s)	254, 689
BccI	CCATC	9 cut(s)	298, 427, 1214, 1290, 1480, 1649, 2014, 2021, 2162
BceAI	ACGGC	2 cut(s)	259, 300
BcgI	CGANNNNNNTGC	4 cut(s)	1547, 1581, 1721, 1755
BciT130I	CCWGG	6 cut(s)	173, 377, 1302, 1944, 2097, 2382
BciVI	GTATCC	2 cut(s)	379, 2229
BclI	TGATCA	1 cut(s)	2014
BcnI	CCSGG	3 cut(s)	67, 293, 555
BcoDI	GTCTC	4 cut(s)	449, 757, 1008, 1994
BcuI	ACTAGT	1 cut(s)	1735
BfaI	CTAG	5 cut(s)	633, 1112, 1425, 1461, 1736
BfmI	CTRYAG	3 cut(s)	1090, 1497, 2399
BfoI	RGCGCY	1 cut(s)	1090
BfrI	CTTAAG	1 cut(s)	566
BfuI	GTATCC	2 cut(s)	379, 2229
BglI	GCCNNNNNGGC	1 cut(s)	185
BglII	AGATCT	1 cut(s)	1166
BlpI	GCTNAGC	1 cut(s)	1155
Bme1390I	CCNGG	9 cut(s)	67, 173, 293, 377, 555, 1302, 1944, 2097, 2382
Bme18I	GGWCC	2 cut(s)	337, 802
BmeT110I	CYCGRG	2 cut(s)	272, 356
BmgT120I	GGNCC	2 cut(s)	337, 802
BmiI	GGNNCC	4 cut(s)	1745, 1816, 1995, 2146
BmrFI	CCNGG	9 cut(s)	67, 173, 293, 377, 555, 1302, 1944, 2097, 2382
BmrI	ACTGGG	1 cut(s)	401
BmsI	GCATC	6 cut(s)	1314, 1480, 1873, 1948, 1957, 2276
BmtI	GCTAGC	1 cut(s)	1464
BmuI	ACTGGG	1 cut(s)	401
BpiI	GAAGAC	1 cut(s)	105
BplI	GAGNNNNNCTC	4 cut(s)	186, 218, 671, 703
BpmI	CTGGAG	5 cut(s)	155, 1401, 1801, 1899, 2426
Bpu10I	CCTNAGC	2 cut(s)	1160, 1242
Bpu1102I	GCTNAGC	1 cut(s)	1155
Bpu14I	TTCGAA	1 cut(s)	733
BpuEI	CTTGAG	3 cut(s)	900, 1100, 1892
BpuMI	CCSGG	3 cut(s)	67, 293, 555
BsaAI	YACGTR	1 cut(s)	2240
BsaBI	GATNNNNATC	1 cut(s)	720
BsaHI	GRCGYC	1 cut(s)	705
BsaI	GGTCTC	2 cut(s)	757, 1994
BsaJI	CCNNGG	5 cut(s)	180, 226, 271, 615, 1465
BsaWI	WCCGGW	1 cut(s)	789
Bse118I	RCCGGY	2 cut(s)	789, 903
Bse1I	ACTGG	5 cut(s)	407, 633, 1418, 1818, 2443
Bse3DI	GCAATG	4 cut(s)	426, 1179, 1253, 1798
Bse8I	GATNNNNATC	1 cut(s)	720
BseBI	CCWGG	6 cut(s)	173, 377, 1302, 1944, 2097, 2382
BseDI	CCNNGG	5 cut(s)	180, 226, 271, 615, 1465
BseGI	GGATG	5 cut(s)	56, 844, 1301, 1495, 1660
BseJI	GATNNNNATC	1 cut(s)	720
BseMI	GCAATG	4 cut(s)	426, 1179, 1253, 1798
BseMII	CTCAG	5 cut(s)	444, 1169, 1174, 1233, 1989
BseNI	ACTGG	5 cut(s)	407, 633, 1418, 1818, 2443
BseRI	GAGGAG	7 cut(s)	248, 260, 679, 1283, 1368, 1482, 1527
BseSI	GKGCMC	1 cut(s)	311
BsgI	GTGCAG	3 cut(s)	501, 1503, 2202
Bsh1236I	CGCG	1 cut(s)	2478
Bsh1285I	CGRYCG	1 cut(s)	1561
BshFI	GGCC	6 cut(s)	125, 158, 179, 425, 1139, 1300
BshNI	GGYRCC	2 cut(s)	1743, 1993
BshTI	ACCGGT	1 cut(s)	789
BsiEI	CGRYCG	1 cut(s)	1561
BsiHKAI	GWGCWC	2 cut(s)	254, 689
BsiHKCI	CYCGRG	2 cut(s)	272, 356
BsiSI	CCGG	5 cut(s)	67, 292, 554, 790, 904
BslFI	GGGAC	2 cut(s)	130, 430
BsmAI	GTCTC	4 cut(s)	449, 757, 1008, 1994
BsmFI	GGGAC	2 cut(s)	130, 430
BsmI	GAATGC	3 cut(s)	188, 1930, 2097
BsnI	GGCC	6 cut(s)	125, 158, 179, 425, 1139, 1300
Bso31I	GGTCTC	2 cut(s)	757, 1994
BsoBI	CYCGRG	2 cut(s)	272, 356
Bsp119I	TTCGAA	1 cut(s)	733
Bsp1286I	GDGCHC	4 cut(s)	254, 311, 363, 689
Bsp143I	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
Bsp1720I	GCTNAGC	1 cut(s)	1155
Bsp19I	CCATGG	1 cut(s)	615
BspANI	GGCC	6 cut(s)	125, 158, 179, 425, 1139, 1300
BspCNI	CTCAG	5 cut(s)	445, 1168, 1173, 1234, 1990
BspFNI	CGCG	1 cut(s)	2478
BspHI	TCATGA	1 cut(s)	504
BspLI	GGNNCC	4 cut(s)	1745, 1816, 1995, 2146
BspMAI	CTGCAG	3 cut(s)	1094, 1501, 2403
BspOI	GCTAGC	1 cut(s)	1464
BspPI	GGATC	3 cut(s)	716, 2052, 2313
BspQI	GCTCTTC	1 cut(s)	1977
BspT104I	TTCGAA	1 cut(s)	733
BspT107I	GGYRCC	2 cut(s)	1743, 1993
BspTI	CTTAAG	1 cut(s)	566
BspTNI	GGTCTC	2 cut(s)	757, 1994
BsrBI	CCGCTC	1 cut(s)	63
BsrDI	GCAATG	4 cut(s)	426, 1179, 1253, 1798
BsrFI	RCCGGY	2 cut(s)	789, 903
BsrI	ACTGG	5 cut(s)	407, 633, 1418, 1818, 2443
BssAI	RCCGGY	2 cut(s)	789, 903
BssECI	CCNNGG	5 cut(s)	180, 226, 271, 615, 1465
BssMI	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
BssNAI	GTATAC	1 cut(s)	650
BssNI	GRCGYC	1 cut(s)	705
BssT1I	CCWWGG	1 cut(s)	615
Bst1107I	GTATAC	1 cut(s)	650
Bst2UI	CCWGG	6 cut(s)	173, 377, 1302, 1944, 2097, 2382
Bst4CI	ACNGT	7 cut(s)	184, 237, 462, 1391, 1619, 1725, 1993
Bst6I	CTCTTC	5 cut(s)	375, 969, 1545, 1834, 1977
BstACI	GRCGYC	1 cut(s)	705
BstAFI	CTTAAG	1 cut(s)	566
BstAPI	GCANNNNNTGC	4 cut(s)	1070, 1235, 1505, 1514
BstBAI	YACGTR	1 cut(s)	2240
BstBI	TTCGAA	1 cut(s)	733
BstDEI	CTNAG	6 cut(s)	453, 1155, 1160, 1242, 1682, 1998
BstDSI	CCRYGG	2 cut(s)	180, 615
BstENI	CCTNNNNNAGG	3 cut(s)	733, 947, 1947
BstF5I	GGATG	5 cut(s)	56, 844, 1301, 1495, 1660
BstFNI	CGCG	1 cut(s)	2478
BstH2I	RGCGCY	1 cut(s)	1090
BstHHI	GCGC	3 cut(s)	1089, 2387, 2480
BstKTI	GATC	9 cut(s)	219, 724, 1169, 1561, 1594, 1900, 2017, 2047, 2308
BstMAI	GTCTC	4 cut(s)	449, 757, 1008, 1994
BstMBI	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
BstMCI	CGRYCG	1 cut(s)	1561
BstNI	CCWGG	6 cut(s)	173, 377, 1302, 1944, 2097, 2382
BstNSI	RCATGY	2 cut(s)	1557, 2371
BstSCI	CCNGG	9 cut(s)	65, 171, 291, 375, 553, 1300, 1942, 2095, 2380
BstSFI	CTRYAG	3 cut(s)	1090, 1497, 2399
BstSLI	GKGCMC	1 cut(s)	311
BstUI	CGCG	1 cut(s)	2478
BstV2I	GAAGAC	1 cut(s)	105
BstX2I	RGATCY	2 cut(s)	1166, 2044
BstYI	RGATCY	2 cut(s)	1166, 2044
BstZ17I	GTATAC	1 cut(s)	650
BsuI	GTATCC	2 cut(s)	379, 2229
BsuRI	GGCC	6 cut(s)	125, 158, 179, 425, 1139, 1300
BtgI	CCRYGG	2 cut(s)	180, 615
BtgZI	GCGATG	1 cut(s)	2364
BtsCI	GGATG	5 cut(s)	56, 844, 1301, 1495, 1660
BtsI	GCAGTG	4 cut(s)	523, 860, 1099, 1488
CaiI	CAGNNNCTG	1 cut(s)	1235
CciI	TCATGA	1 cut(s)	504
CfoI	GCGC	3 cut(s)	1089, 2387, 2480
Cfr10I	RCCGGY	2 cut(s)	789, 903
Cfr13I	GGNCC	2 cut(s)	337, 802
CseI	GACGC	2 cut(s)	713, 2417
Csp6I	GTAC	5 cut(s)	1045, 1821, 1953, 2378, 2396
CspAI	ACCGGT	1 cut(s)	789
CviQI	GTAC	5 cut(s)	1045, 1821, 1953, 2378, 2396
DdeI	CTNAG	6 cut(s)	453, 1155, 1160, 1242, 1682, 1998
DpnI	GATC	9 cut(s)	218, 723, 1168, 1560, 1593, 1899, 2016, 2046, 2307
DpnII	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
DraI	TTTAAA	2 cut(s)	2178, 2464
DrdI	GACNNNNNNGTC	2 cut(s)	2372, 2443
DseDI	GACNNNNNNGTC	2 cut(s)	2372, 2443
EaeI	YGGCCR	2 cut(s)	177, 423
Eam1104I	CTCTTC	5 cut(s)	375, 969, 1545, 1834, 1977
EarI	CTCTTC	5 cut(s)	375, 969, 1545, 1834, 1977
EciI	GGCGGA	2 cut(s)	246, 2248
Ecl136II	GAGCTC	1 cut(s)	252
Eco130I	CCWWGG	1 cut(s)	615
Eco147I	AGGCCT	1 cut(s)	158
Eco24I	GRGCYC	2 cut(s)	254, 363
Eco31I	GGTCTC	2 cut(s)	757, 1994
Eco47I	GGWCC	2 cut(s)	337, 802
Eco47III	AGCGCT	1 cut(s)	1088
Eco53kI	GAGCTC	1 cut(s)	252
Eco57I	CTGAAG	4 cut(s)	411, 1019, 1836, 2405
Eco88I	CYCGRG	2 cut(s)	272, 356
EcoICRI	GAGCTC	1 cut(s)	252
EcoNI	CCTNNNNNAGG	3 cut(s)	733, 947, 1947
EcoRI	GAATTC	1 cut(s)	2278
EcoRII	CCWGG	6 cut(s)	171, 375, 1300, 1942, 2095, 2380
EcoT14I	CCWWGG	1 cut(s)	615
EcoT22I	ATGCAT	1 cut(s)	1380
EcoT38I	GRGCYC	2 cut(s)	254, 363
ErhI	CCWWGG	1 cut(s)	615
FalI	AAGNNNNNCTT	2 cut(s)	950, 982
FaqI	GGGAC	2 cut(s)	130, 430
FauI	CCCGC	4 cut(s)	29, 68, 371, 455
FbaI	TGATCA	1 cut(s)	2014
FblI	GTMKAC	1 cut(s)	649
FokI	GGATG	5 cut(s)	43, 831, 1308, 1502, 1667
FriOI	GRGCYC	2 cut(s)	254, 363
FspBI	CTAG	5 cut(s)	633, 1112, 1425, 1461, 1736
GlaI	GCGC	3 cut(s)	1088, 2386, 2479
GsuI	CTGGAG	5 cut(s)	155, 1401, 1801, 1899, 2426
HaeII	RGCGCY	1 cut(s)	1090
HaeIII	GGCC	6 cut(s)	125, 158, 179, 425, 1139, 1300
HapII	CCGG	5 cut(s)	67, 292, 554, 790, 904
HgaI	GACGC	2 cut(s)	713, 2417
HhaI	GCGC	3 cut(s)	1089, 2387, 2480
Hin1I	GRCGYC	1 cut(s)	705
Hin6I	GCGC	3 cut(s)	1087, 2385, 2478
HinP1I	GCGC	3 cut(s)	1087, 2385, 2478
HinfI	GANTC	9 cut(s)	86, 150, 208, 372, 1025, 1124, 1547, 1622, 1754
HpaII	CCGG	5 cut(s)	67, 292, 554, 790, 904
HphI	GGTGA	5 cut(s)	71, 529, 631, 1093, 2001
Hpy166II	GTNNAC	5 cut(s)	340, 650, 802, 1109, 1123
Hpy8I	GTNNAC	5 cut(s)	340, 650, 802, 1109, 1123
Hpy99I	CGWCG	2 cut(s)	49, 121
HpyAV	CCTTC	6 cut(s)	729, 953, 1349, 1426, 1860, 2035
HpyCH4III	ACNGT	7 cut(s)	184, 237, 462, 1391, 1619, 1725, 1993
HpyCH4IV	ACGT	2 cut(s)	1510, 2239
HpyF3I	CTNAG	6 cut(s)	453, 1155, 1160, 1242, 1682, 1998
HpySE526I	ACGT	2 cut(s)	1510, 2239
Hsp92I	GRCGYC	1 cut(s)	705
HspAI	GCGC	3 cut(s)	1087, 2385, 2478
KroI	GCCGGC	1 cut(s)	903
KroNI	GCCGGC	1 cut(s)	905
Ksp22I	TGATCA	1 cut(s)	2014
Kzo9I	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
LguI	GCTCTTC	1 cut(s)	1977
LmnI	GCTCC	9 cut(s)	68, 692, 1223, 1270, 1355, 1540, 1711, 1820, 2069
LweI	GCATC	6 cut(s)	1314, 1480, 1873, 1948, 1957, 2276
MaeI	CTAG	5 cut(s)	633, 1112, 1425, 1461, 1736
MaeII	ACGT	2 cut(s)	1510, 2239
MaeIII	GTNAC	5 cut(s)	624, 785, 1099, 1759, 1855
MalI	GATC	9 cut(s)	218, 723, 1168, 1560, 1593, 1899, 2016, 2046, 2307
MbiI	CCGCTC	1 cut(s)	63
MboI	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
MfeI	CAATTG	3 cut(s)	498, 1404, 2388
MflI	RGATCY	2 cut(s)	1166, 2044
MhlI	GDGCHC	4 cut(s)	254, 311, 363, 689
MluCI	AATT	8 cut(s)	498, 606, 896, 1382, 1404, 2110, 2278, 2388
MlyI	GAGTC	2 cut(s)	1118, 1541
MmeI	TCCRAC	4 cut(s)	219, 681, 688, 749
Mph1103I	ATGCAT	1 cut(s)	1380
MroNI	GCCGGC	1 cut(s)	903
MseI	TTAA	8 cut(s)	441, 567, 773, 957, 1842, 2177, 2463, 2485
MslI	CAYNNNNRTG	4 cut(s)	945, 1525, 1617, 2366
MspA1I	CMGCKG	3 cut(s)	366, 1496, 2216
MspCI	CTTAAG	1 cut(s)	566
MspI	CCGG	5 cut(s)	67, 292, 554, 790, 904
MspR9I	CCNGG	9 cut(s)	67, 173, 293, 377, 555, 1302, 1944, 2097, 2382
MunI	CAATTG	3 cut(s)	498, 1404, 2388
Mva1269I	GAATGC	3 cut(s)	188, 1930, 2097
MvaI	CCWGG	6 cut(s)	173, 377, 1302, 1944, 2097, 2382
MvnI	CGCG	1 cut(s)	2478
NaeI	GCCGGC	1 cut(s)	905
NciI	CCSGG	3 cut(s)	67, 293, 555
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
NgoMIV	GCCGGC	1 cut(s)	903
NheI	GCTAGC	1 cut(s)	1460
NlaIV	GGNNCC	4 cut(s)	1745, 1816, 1995, 2146
NmeAIII	GCCGAG	3 cut(s)	121, 207, 1490
NmuCI	GTSAC	4 cut(s)	624, 785, 1099, 1855
NsiI	ATGCAT	1 cut(s)	1380
NspI	RCATGY	2 cut(s)	1557, 2371
NspV	TTCGAA	1 cut(s)	733
OliI	CACNNNNGTG	2 cut(s)	945, 1617
PaeI	GCATGC	1 cut(s)	1557
PaeR7I	CTCGAG	1 cut(s)	356
PagI	TCATGA	1 cut(s)	504
PceI	AGGCCT	1 cut(s)	158
PciI	ACATGT	1 cut(s)	2367
PciSI	GCTCTTC	1 cut(s)	1977
PcsI	WCGNNNNNNNCGW	3 cut(s)	116, 943, 2346
PctI	GAATGC	3 cut(s)	188, 1930, 2097
PdiI	GCCGGC	1 cut(s)	905
PfeI	GAWTC	7 cut(s)	86, 150, 208, 372, 1025, 1622, 1754
PflMI	CCANNNNNTGG	2 cut(s)	995, 2027
PfoI	TCCNGGA	4 cut(s)	65, 291, 375, 1942
PinAI	ACCGGT	1 cut(s)	789
Ple19I	CGATCG	1 cut(s)	1561
PleI	GAGTC	2 cut(s)	1118, 1541
PpsI	GAGTC	2 cut(s)	1118, 1541
Ppu21I	YACGTR	1 cut(s)	2240
PscI	ACATGT	1 cut(s)	2367
PsiI	TTATAA	2 cut(s)	1706, 1836
Psp124BI	GAGCTC	1 cut(s)	254
Psp6I	CCWGG	6 cut(s)	171, 375, 1300, 1942, 2095, 2380
PspGI	CCWGG	6 cut(s)	171, 375, 1300, 1942, 2095, 2380
PspN4I	GGNNCC	4 cut(s)	1745, 1816, 1995, 2146
PspPI	GGNCC	2 cut(s)	337, 802
PspXI	VCTCGAGB	1 cut(s)	356
PstI	CTGCAG	3 cut(s)	1094, 1501, 2403
PstNI	CAGNNNCTG	1 cut(s)	1235
PsuI	RGATCY	2 cut(s)	1166, 2044
PvuI	CGATCG	1 cut(s)	1561
PvuII	CAGCTG	2 cut(s)	1496, 2216
RsaI	GTAC	5 cut(s)	1046, 1822, 1954, 2379, 2397
RsaNI	GTAC	5 cut(s)	1045, 1821, 1953, 2378, 2396
RseI	CAYNNNNRTG	4 cut(s)	945, 1525, 1617, 2366
SacI	GAGCTC	1 cut(s)	254
SapI	GCTCTTC	1 cut(s)	1977
SaqAI	TTAA	8 cut(s)	441, 567, 773, 957, 1842, 2177, 2463, 2485
Sau3AI	GATC	9 cut(s)	216, 721, 1166, 1558, 1591, 1897, 2014, 2044, 2305
Sau96I	GGNCC	2 cut(s)	337, 802
SchI	GAGTC	2 cut(s)	1118, 1541
ScrFI	CCNGG	9 cut(s)	67, 173, 293, 377, 555, 1302, 1944, 2097, 2382
SduI	GDGCHC	4 cut(s)	254, 311, 363, 689
SfaNI	GCATC	6 cut(s)	1314, 1480, 1873, 1948, 1957, 2276
SfcI	CTRYAG	3 cut(s)	1090, 1497, 2399
Sfr274I	CTCGAG	1 cut(s)	356
SfuI	TTCGAA	1 cut(s)	733
SinI	GGWCC	2 cut(s)	337, 802
SlaI	CTCGAG	1 cut(s)	356
SmiMI	CAYNNNNRTG	4 cut(s)	945, 1525, 1617, 2366
SmlI	CTYRAG	5 cut(s)	356, 566, 915, 1079, 1871
SmoI	CTYRAG	5 cut(s)	356, 566, 915, 1079, 1871
SpeI	ACTAGT	1 cut(s)	1735
SphI	GCATGC	1 cut(s)	1557
Sse9I	AATT	8 cut(s)	498, 606, 896, 1382, 1404, 2110, 2278, 2388
SseBI	AGGCCT	1 cut(s)	158
SspMI	CTAG	5 cut(s)	633, 1112, 1425, 1461, 1736
SstI	GAGCTC	1 cut(s)	254
StuI	AGGCCT	1 cut(s)	158
StyD4I	CCNGG	9 cut(s)	65, 171, 291, 375, 553, 1300, 1942, 2095, 2380
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	7 cut(s)	184, 237, 462, 1391, 1619, 1725, 1993
TaiI	ACGT	2 cut(s)	1513, 2242
TaqI	TCGA	9 cut(s)	153, 261, 300, 357, 733, 755, 1342, 1752, 1975
TasI	AATT	8 cut(s)	498, 606, 896, 1382, 1404, 2110, 2278, 2388
TatI	WGTACW	2 cut(s)	1820, 2395
TauI	GCSGC	3 cut(s)	179, 1058, 1397
TfiI	GAWTC	7 cut(s)	86, 150, 208, 372, 1025, 1622, 1754
Tru1I	TTAA	8 cut(s)	441, 567, 773, 957, 1842, 2177, 2463, 2485
Tru9I	TTAA	8 cut(s)	441, 567, 773, 957, 1842, 2177, 2463, 2485
TseFI	GTSAC	4 cut(s)	624, 785, 1099, 1855
Tsp45I	GTSAC	4 cut(s)	624, 785, 1099, 1855
TspDTI	ATGAA	7 cut(s)	618, 909, 987, 1395, 1907, 2199, 2350
Van91I	CCANNNNNTGG	2 cut(s)	995, 2027
Vha464I	CTTAAG	1 cut(s)	566
VpaK11BI	GGWCC	2 cut(s)	337, 802
XagI	CCTNNNNNAGG	3 cut(s)	733, 947, 1947
XapI	RAATTY	5 cut(s)	606, 896, 1382, 2110, 2278
XceI	RCATGY	2 cut(s)	1557, 2371
XhoI	CTCGAG	1 cut(s)	356
XmiI	GTMKAC	1 cut(s)	649
XspI	CTAG	5 cut(s)	633, 1112, 1425, 1461, 1736
Zsp2I	ATGCAT	1 cut(s)	1380

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.